edfcore 0.1.12 → 0.1.13

package/dist/constants.d.ts

@@ -109,5 +109,5 @@ export declare const SIGNAL_FIELD_BLOCK_OFFSETS: {
     readonly reserved: 224;
 };
 /** Published package version. Kept in sync with package.json by a test. */
-export declare const VERSION = "0.1.12";
+export declare const VERSION = "0.1.13";
 //# sourceMappingURL=constants.d.ts.map

package/dist/constants.js

@@ -79,5 +79,5 @@ export const SIGNAL_FIELD_BLOCK_OFFSETS = {
     reserved: 224,
 };
 /** Published package version. Kept in sync with package.json by a test. */
-export const VERSION = '0.1.12';
+export const VERSION = '0.1.13';
 //# sourceMappingURL=constants.js.map

package/dist/format-report.d.ts

@@ -0,0 +1,23 @@
+/**
+ * A validation report as text.
+ *
+ * Part of `edfcore/validate`. `validateRecording` returns a report a program can branch on; this
+ * turns it into the thing a person reads at the end of a CI job or a conformance sweep.
+ *
+ * The one judgement it makes is what to lead with. A sweep over a damaged file can produce six
+ * figures of diagnostics — `TIMEKEEPING_TAL_MISSING` is per record — and a wall of them buries
+ * the answer. So the counts come first, then the distinct codes with how often each occurred,
+ * and only then the individual entries, capped. What a reader needs first is *which kinds* of
+ * thing are wrong and how much of the file is affected.
+ */
+import type { EdfHeader, FormatReportOptions, ValidationReport } from './types.js';
+/**
+ * A multi-line summary of a validation report.
+ *
+ * `header` is optional and only used to name signals: a report is perfectly readable without it,
+ * and a caller who has one gets `EEG Fpz-Cz` instead of `signal 0`.
+ */
+export declare function formatValidationReport(report: ValidationReport, options?: FormatReportOptions): string;
+/** The header type, re-exported so a consumer of the subpath can name the option. */
+export type { EdfHeader };
+//# sourceMappingURL=format-report.d.ts.map

package/dist/format-report.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"format-report.d.ts","sourceRoot":"","sources":["../src/format-report.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;GAWG;AAGH,OAAO,KAAK,EAAE,SAAS,EAAE,mBAAmB,EAAE,gBAAgB,EAAE,MAAM,YAAY,CAAC;AASnF;;;;;GAKG;AACH,wBAAgB,sBAAsB,CACpC,MAAM,EAAE,gBAAgB,EACxB,OAAO,CAAC,EAAE,mBAAmB,GAC5B,MAAM,CAuDR;AAED,qFAAqF;AACrF,YAAY,EAAE,SAAS,EAAE,CAAC"}

package/dist/format-report.js

@@ -0,0 +1,69 @@
+/**
+ * A validation report as text.
+ *
+ * Part of `edfcore/validate`. `validateRecording` returns a report a program can branch on; this
+ * turns it into the thing a person reads at the end of a CI job or a conformance sweep.
+ *
+ * The one judgement it makes is what to lead with. A sweep over a damaged file can produce six
+ * figures of diagnostics — `TIMEKEEPING_TAL_MISSING` is per record — and a wall of them buries
+ * the answer. So the counts come first, then the distinct codes with how often each occurred,
+ * and only then the individual entries, capped. What a reader needs first is *which kinds* of
+ * thing are wrong and how much of the file is affected.
+ */
+import { formatDiagnostics } from './diagnostics/format.js';
+/** Enough to see the pattern, few enough to read. Override with `maxItems`. */
+const DEFAULT_MAX_ITEMS = 20;
+function pluralise(count, noun) {
+    return `${count} ${noun}${count === 1 ? '' : 's'}`;
+}
+/**
+ * A multi-line summary of a validation report.
+ *
+ * `header` is optional and only used to name signals: a report is perfectly readable without it,
+ * and a caller who has one gets `EEG Fpz-Cz` instead of `signal 0`.
+ */
+export function formatValidationReport(report, options) {
+    const lines = [];
+    const header = options?.header;
+    const bySeverity = new Map();
+    const byCode = new Map();
+    for (const diagnostic of report.diagnostics) {
+        bySeverity.set(diagnostic.severity, (bySeverity.get(diagnostic.severity) ?? 0) + 1);
+        byCode.set(diagnostic.code, (byCode.get(diagnostic.code) ?? 0) + 1);
+    }
+    const verdict = report.ok ? 'PASS' : 'FAIL';
+    const severities = bySeverity.size === 0
+        ? 'no diagnostics'
+        : [...bySeverity].map(([severity, count]) => `${count} ${severity}`).join(', ');
+    lines.push(`${verdict} — ${severities}`);
+    lines.push(`scanned ${pluralise(report.recordsScanned, 'record')}, ` +
+        `read ${report.bytesRead.toLocaleString('en-US')} bytes`);
+    if (byCode.size > 0) {
+        lines.push('');
+        lines.push('by code:');
+        // Descending by count: the code affecting most of the file is the one to look at first.
+        for (const [code, count] of [...byCode].sort((a, b) => b[1] - a[1])) {
+            lines.push(`  ${String(count).padStart(7)}  ${code}`);
+        }
+    }
+    if (report.signalStats.length > 0) {
+        lines.push('');
+        lines.push('observed sample ranges:');
+        for (const stats of report.signalStats) {
+            const signal = header?.signals[stats.signalIndex];
+            const name = signal === undefined ? `signal ${stats.signalIndex}` : signal.label;
+            const overflow = stats.outOfDigitalRangeCount > 0
+                ? `  ${stats.outOfDigitalRangeCount} outside the declared range`
+                : '';
+            lines.push(`  ${name.slice(0, 20).padEnd(21)}${stats.observedDigitalMin}..${stats.observedDigitalMax}` +
+                ` over ${stats.sampleCount.toLocaleString('en-US')} samples${overflow}`);
+        }
+    }
+    if (report.diagnostics.length > 0) {
+        const maxItems = options?.maxItems ?? DEFAULT_MAX_ITEMS;
+        lines.push('');
+        lines.push(formatDiagnostics(report.diagnostics, { maxItems }));
+    }
+    return lines.join('\n');
+}
+//# sourceMappingURL=format-report.js.map

package/dist/format-report.js.map

@@ -0,0 +1 @@
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package/dist/types.d.ts

@@ -356,6 +356,12 @@ export interface EdfPhysicalEnvelope {
     readonly min: Float64Array;
     readonly max: Float64Array;
 }
+export interface FormatReportOptions {
+    /** Only used to name signals; a report reads fine without it. */
+    readonly header?: EdfHeader;
+    /** Individual diagnostics to print. Defaults to 20 — the counts above them are the summary. */
+    readonly maxItems?: number;
+}
 export interface FormatHeaderOptions {
     /** Off by default: a header carries a name and a birth date, and a summary gets pasted around. */
     readonly includePatientId?: boolean;

package/dist/types.d.ts.map

@@ -1 +1 @@
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package/dist/validate.d.ts

@@ -18,6 +18,7 @@
  * 9, they can never be fatal, and a consumer's `switch` keeps its `default` branch.
  */
 import type { EdfDiagnostic, EdfHeader, EdfRecording, ValidateOptions, ValidationReport } from './types.js';
+export { formatValidationReport } from './format-report.js';
 /**
  * The three shapes only this subpath produces, re-exported from where they are declared.
  *
@@ -25,7 +26,7 @@ import type { EdfDiagnostic, EdfHeader, EdfRecording, ValidateOptions, Validatio
  * consumer of `edfcore/validate` must be able to name a `ValidationReport` without reaching into
  * the universal entry for it.
  */
-export type { ObservedSignalStats, ValidateOptions, ValidationReport } from './types.js';
+export type { FormatReportOptions, ObservedSignalStats, ValidateOptions, ValidationReport, } from './types.js';
 /**
  * Header conformance, as a standalone list.
  *

package/dist/validate.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"validate.d.ts","sourceRoot":"","sources":["../src/validate.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;GAkBG;AAcH,OAAO,KAAK,EAEV,aAAa,EAEb,SAAS,EAET,YAAY,EAIZ,eAAe,EACf,gBAAgB,EACjB,MAAM,YAAY,CAAC;AAEpB;;;;;;GAMG;AACH,YAAY,EAAE,mBAAmB,EAAE,eAAe,EAAE,gBAAgB,EAAE,MAAM,YAAY,CAAC;AAiSzF;;;;;GAKG;AACH,wBAAgB,cAAc,CAAC,MAAM,EAAE,SAAS,GAAG,SAAS,aAAa,EAAE,CAe1E;AAgND;;;;;;;;;;;;;;;GAeG;AACH,wBAAsB,iBAAiB,CACrC,SAAS,EAAE,YAAY,EACvB,OAAO,CAAC,EAAE,eAAe,GACxB,OAAO,CAAC,gBAAgB,CAAC,CA+C3B"}
+{"version":3,"file":"validate.d.ts","sourceRoot":"","sources":["../src/validate.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;GAkBG;AAcH,OAAO,KAAK,EAEV,aAAa,EAEb,SAAS,EAET,YAAY,EAIZ,eAAe,EACf,gBAAgB,EACjB,MAAM,YAAY,CAAC;AAEpB,OAAO,EAAE,sBAAsB,EAAE,MAAM,oBAAoB,CAAC;AAC5D;;;;;;GAMG;AACH,YAAY,EACV,mBAAmB,EACnB,mBAAmB,EACnB,eAAe,EACf,gBAAgB,GACjB,MAAM,YAAY,CAAC;AAiSpB;;;;;GAKG;AACH,wBAAgB,cAAc,CAAC,MAAM,EAAE,SAAS,GAAG,SAAS,aAAa,EAAE,CAe1E;AAgND;;;;;;;;;;;;;;;GAeG;AACH,wBAAsB,iBAAiB,CACrC,SAAS,EAAE,YAAY,EACvB,OAAO,CAAC,EAAE,eAAe,GACxB,OAAO,CAAC,gBAAgB,CAAC,CA+C3B"}

package/dist/validate.js

@@ -29,6 +29,7 @@ import { scanChunkRecords } from './record-index.js';
 import { decodeAnnotations } from './tal/annotations.js';
 import { buildSegmentation } from './time/segments.js';
 import { assertMonotonicOnsetArray } from './time/timeline.js';
+export { formatValidationReport } from './format-report.js';
 const LABEL_SPEC = 'EDF+ additional specification 9 (standard texts and labels)';
 const TIMEKEEPING_SPEC = 'EDF+ specification 2.2.1 (time keeping of data records)';
 /** The sample-scan scratch buffer is an `Int32Array`, so four bytes per sample. */

package/dist/validate.js.map

@@ -1 +1 @@
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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "edfcore",
-  "version": "0.1.12",
+  "version": "0.1.13",
   "description": "Modern, typed, zero-dependency reader for EDF, EDF+, BDF and BDF+ biosignal files. Works in browsers and Node with true random access.",
   "keywords": [
     "edf",

package/src/constants.ts

@@ -93,4 +93,4 @@ export const SIGNAL_FIELD_BLOCK_OFFSETS = {
 } as const;
 
 /** Published package version. Kept in sync with package.json by a test. */
-export const VERSION = '0.1.12';
+export const VERSION = '0.1.13';

package/src/format-report.ts

@@ -0,0 +1,91 @@
+/**
+ * A validation report as text.
+ *
+ * Part of `edfcore/validate`. `validateRecording` returns a report a program can branch on; this
+ * turns it into the thing a person reads at the end of a CI job or a conformance sweep.
+ *
+ * The one judgement it makes is what to lead with. A sweep over a damaged file can produce six
+ * figures of diagnostics — `TIMEKEEPING_TAL_MISSING` is per record — and a wall of them buries
+ * the answer. So the counts come first, then the distinct codes with how often each occurred,
+ * and only then the individual entries, capped. What a reader needs first is *which kinds* of
+ * thing are wrong and how much of the file is affected.
+ */
+
+import { formatDiagnostics } from './diagnostics/format.js';
+import type { EdfHeader, FormatReportOptions, ValidationReport } from './types.js';
+
+/** Enough to see the pattern, few enough to read. Override with `maxItems`. */
+const DEFAULT_MAX_ITEMS = 20;
+
+function pluralise(count: number, noun: string): string {
+  return `${count} ${noun}${count === 1 ? '' : 's'}`;
+}
+
+/**
+ * A multi-line summary of a validation report.
+ *
+ * `header` is optional and only used to name signals: a report is perfectly readable without it,
+ * and a caller who has one gets `EEG Fpz-Cz` instead of `signal 0`.
+ */
+export function formatValidationReport(
+  report: ValidationReport,
+  options?: FormatReportOptions,
+): string {
+  const lines: string[] = [];
+  const header = options?.header;
+
+  const bySeverity = new Map<string, number>();
+  const byCode = new Map<string, number>();
+  for (const diagnostic of report.diagnostics) {
+    bySeverity.set(diagnostic.severity, (bySeverity.get(diagnostic.severity) ?? 0) + 1);
+    byCode.set(diagnostic.code, (byCode.get(diagnostic.code) ?? 0) + 1);
+  }
+
+  const verdict = report.ok ? 'PASS' : 'FAIL';
+  const severities =
+    bySeverity.size === 0
+      ? 'no diagnostics'
+      : [...bySeverity].map(([severity, count]) => `${count} ${severity}`).join(', ');
+  lines.push(`${verdict} — ${severities}`);
+  lines.push(
+    `scanned ${pluralise(report.recordsScanned, 'record')}, ` +
+      `read ${report.bytesRead.toLocaleString('en-US')} bytes`,
+  );
+
+  if (byCode.size > 0) {
+    lines.push('');
+    lines.push('by code:');
+    // Descending by count: the code affecting most of the file is the one to look at first.
+    for (const [code, count] of [...byCode].sort((a, b) => b[1] - a[1])) {
+      lines.push(`  ${String(count).padStart(7)}  ${code}`);
+    }
+  }
+
+  if (report.signalStats.length > 0) {
+    lines.push('');
+    lines.push('observed sample ranges:');
+    for (const stats of report.signalStats) {
+      const signal = header?.signals[stats.signalIndex];
+      const name = signal === undefined ? `signal ${stats.signalIndex}` : signal.label;
+      const overflow =
+        stats.outOfDigitalRangeCount > 0
+          ? `  ${stats.outOfDigitalRangeCount} outside the declared range`
+          : '';
+      lines.push(
+        `  ${name.slice(0, 20).padEnd(21)}${stats.observedDigitalMin}..${stats.observedDigitalMax}` +
+          ` over ${stats.sampleCount.toLocaleString('en-US')} samples${overflow}`,
+      );
+    }
+  }
+
+  if (report.diagnostics.length > 0) {
+    const maxItems = options?.maxItems ?? DEFAULT_MAX_ITEMS;
+    lines.push('');
+    lines.push(formatDiagnostics(report.diagnostics, { maxItems }));
+  }
+
+  return lines.join('\n');
+}
+
+/** The header type, re-exported so a consumer of the subpath can name the option. */
+export type { EdfHeader };

package/src/types.ts

@@ -420,6 +420,13 @@ export interface EdfPhysicalEnvelope {
   readonly max: Float64Array;
 }
 
+export interface FormatReportOptions {
+  /** Only used to name signals; a report reads fine without it. */
+  readonly header?: EdfHeader;
+  /** Individual diagnostics to print. Defaults to 20 — the counts above them are the summary. */
+  readonly maxItems?: number;
+}
+
 export interface FormatHeaderOptions {
   /** Off by default: a header carries a name and a birth date, and a summary gets pasted around. */
   readonly includePatientId?: boolean;

package/src/validate.ts

@@ -44,6 +44,7 @@ import type {
   ValidationReport,
 } from './types.js';
 
+export { formatValidationReport } from './format-report.js';
 /**
  * The three shapes only this subpath produces, re-exported from where they are declared.
  *
@@ -51,7 +52,12 @@ import type {
  * consumer of `edfcore/validate` must be able to name a `ValidationReport` without reaching into
  * the universal entry for it.
  */
-export type { ObservedSignalStats, ValidateOptions, ValidationReport } from './types.js';
+export type {
+  FormatReportOptions,
+  ObservedSignalStats,
+  ValidateOptions,
+  ValidationReport,
+} from './types.js';
 
 const LABEL_SPEC = 'EDF+ additional specification 9 (standard texts and labels)';
 const TIMEKEEPING_SPEC = 'EDF+ specification 2.2.1 (time keeping of data records)';