edf2csv 0.2.6 → 0.2.8
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/CHANGELOG.md +31 -0
- package/dist/convert/plan.d.ts.map +1 -1
- package/dist/convert/plan.js +13 -2
- package/dist/convert/plan.js.map +1 -1
- package/dist/convert/run.js +21 -3
- package/dist/convert/run.js.map +1 -1
- package/package.json +1 -1
package/CHANGELOG.md
CHANGED
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@@ -3,6 +3,37 @@
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Notable changes to edf2csv. Versions follow [semantic versioning](https://semver.org); while the
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major version is 0, a minor bump may contain breaking changes.
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## 0.2.8
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### Changed: a mistyped channel name is now an error under `--annotations-only` too
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+
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Channel selection was skipped entirely when `--annotations-only` was given, since the selection has
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nothing to act on in that mode. The effect was that `--channels TYPO --annotations-only` exited 0 in
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silence, while the same typo without the flag was a usage error — and `--channels ""` stayed an error
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in both. A mistyped name was the one form of bad input the tool accepted quietly.
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The names are now validated in both modes. Everywhere else in the tool a term matching nothing is
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reported rather than ignored, and a flag that happens not to apply is a poor reason to make an
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exception. Valid selections behave exactly as before, and `--annotations-only` output is unchanged.
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## 0.2.7
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### Fixed: a failed sidecar write reported a raw filesystem error
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`channels.csv`, `annotations.csv` and `metadata.json` were written with a bare `writeFile`, so a
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failure escaped as whatever the filesystem said and nothing else:
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```
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error: EISDIR: illegal operation on a directory, open '/path/out/channels.csv'
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```
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No hint, and — more importantly — no mention that the signal files had already been written, so the
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output directory was left half-complete with nothing saying so. The signal writer has always
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reported this properly; the three sidecars did not.
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They now go through the same path, naming the file that failed and stating that what is on disk is
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incomplete and should not be used.
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## 0.2.6
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### Fixed: two conversions into the same directory both succeeded and corrupted the output
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@@ -1 +1 @@
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1
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-
{"version":3,"file":"plan.d.ts","sourceRoot":"","sources":["../../src/convert/plan.ts"],"names":[],"mappings":"AAAA;;;;;;;;;GASG;AAEH,OAAO,KAAK,EAAE,UAAU,EAAE,MAAM,kBAAkB,CAAC;AACnD,OAAO,KAAK,EAAE,SAAS,EAAE,MAAM,kBAAkB,CAAC;AAMlD,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,iBAAiB,CAAC;AAErD,MAAM,WAAW,cAAc;IAC7B,MAAM,EAAE,SAAS,CAAC;IAClB,MAAM,EAAE,MAAM,CAAC;IACf,QAAQ,EAAE,MAAM,CAAC;CAClB;AAED,MAAM,WAAW,SAAS;IACxB,iEAAiE;IACjE,IAAI,EAAE,MAAM,CAAC;IACb,gBAAgB,EAAE,MAAM,CAAC;IACzB,QAAQ,EAAE,MAAM,CAAC;IACjB,YAAY,EAAE,MAAM,CAAC;IACrB,QAAQ,EAAE,cAAc,EAAE,CAAC;CAC5B;AAED,MAAM,WAAW,SAAS;IACxB,OAAO,EAAE,SAAS,SAAS,EAAE,CAAC;IAC9B,cAAc,EAAE,MAAM,CAAC;IACvB,WAAW,EAAE,MAAM,CAAC;IACpB,oBAAoB,EAAE,OAAO,CAAC;IAC9B;;;;;OAKG;IACH,YAAY,CAAC,EAAE,YAAY,GAAG,IAAI,GAAG,SAAS,CAAC;CAChD;AAED,MAAM,WAAW,WAAW;IAC1B,QAAQ,CAAC,EAAE,SAAS,MAAM,EAAE,GAAG,SAAS,CAAC;IACzC,KAAK,CAAC,EAAE,MAAM,GAAG,SAAS,CAAC;IAC3B,QAAQ,CAAC,EAAE,MAAM,GAAG,SAAS,CAAC;IAC9B,GAAG,CAAC,EAAE,MAAM,GAAG,SAAS,CAAC;IACzB,eAAe,CAAC,EAAE,OAAO,GAAG,SAAS,CAAC;IACtC,2EAA2E;IAC3E,QAAQ,CAAC,EAAE,MAAM,GAAG,SAAS,CAAC;CAC/B;AAED,MAAM,WAAW,cAAc;IAC7B,MAAM,EAAE,SAAS,EAAE,CAAC;IACpB,KAAK,EAAE,aAAa,CAAC;IACrB,WAAW,EAAE,GAAG,CAAC,MAAM,EAAE,MAAM,CAAC,CAAC;IACjC,YAAY,EAAE,OAAO,CAAC;IACtB,WAAW,EAAE,UAAU,EAAE,CAAC;IAC1B,QAAQ,EAAE,cAAc,CAAC;CAC1B;AAED,MAAM,WAAW,cAAc;IAC7B,gDAAgD;IAChD,IAAI,EAAE,MAAM,CAAC;IACb,mDAAmD;IACnD,KAAK,EAAE,MAAM,CAAC;IACd,gEAAgE;IAChE,uBAAuB,EAAE,OAAO,CAAC;CAClC;AAED,oFAAoF;AACpF,eAAO,MAAM,qBAAqB,UAAY,CAAC;AAE/C,wBAAgB,SAAS,CAAC,KAAK,EAAE,SAAS,EAAE,OAAO,GAAE,WAAgB,GAAG,cAAc,
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{"version":3,"file":"plan.d.ts","sourceRoot":"","sources":["../../src/convert/plan.ts"],"names":[],"mappings":"AAAA;;;;;;;;;GASG;AAEH,OAAO,KAAK,EAAE,UAAU,EAAE,MAAM,kBAAkB,CAAC;AACnD,OAAO,KAAK,EAAE,SAAS,EAAE,MAAM,kBAAkB,CAAC;AAMlD,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,iBAAiB,CAAC;AAErD,MAAM,WAAW,cAAc;IAC7B,MAAM,EAAE,SAAS,CAAC;IAClB,MAAM,EAAE,MAAM,CAAC;IACf,QAAQ,EAAE,MAAM,CAAC;CAClB;AAED,MAAM,WAAW,SAAS;IACxB,iEAAiE;IACjE,IAAI,EAAE,MAAM,CAAC;IACb,gBAAgB,EAAE,MAAM,CAAC;IACzB,QAAQ,EAAE,MAAM,CAAC;IACjB,YAAY,EAAE,MAAM,CAAC;IACrB,QAAQ,EAAE,cAAc,EAAE,CAAC;CAC5B;AAED,MAAM,WAAW,SAAS;IACxB,OAAO,EAAE,SAAS,SAAS,EAAE,CAAC;IAC9B,cAAc,EAAE,MAAM,CAAC;IACvB,WAAW,EAAE,MAAM,CAAC;IACpB,oBAAoB,EAAE,OAAO,CAAC;IAC9B;;;;;OAKG;IACH,YAAY,CAAC,EAAE,YAAY,GAAG,IAAI,GAAG,SAAS,CAAC;CAChD;AAED,MAAM,WAAW,WAAW;IAC1B,QAAQ,CAAC,EAAE,SAAS,MAAM,EAAE,GAAG,SAAS,CAAC;IACzC,KAAK,CAAC,EAAE,MAAM,GAAG,SAAS,CAAC;IAC3B,QAAQ,CAAC,EAAE,MAAM,GAAG,SAAS,CAAC;IAC9B,GAAG,CAAC,EAAE,MAAM,GAAG,SAAS,CAAC;IACzB,eAAe,CAAC,EAAE,OAAO,GAAG,SAAS,CAAC;IACtC,2EAA2E;IAC3E,QAAQ,CAAC,EAAE,MAAM,GAAG,SAAS,CAAC;CAC/B;AAED,MAAM,WAAW,cAAc;IAC7B,MAAM,EAAE,SAAS,EAAE,CAAC;IACpB,KAAK,EAAE,aAAa,CAAC;IACrB,WAAW,EAAE,GAAG,CAAC,MAAM,EAAE,MAAM,CAAC,CAAC;IACjC,YAAY,EAAE,OAAO,CAAC;IACtB,WAAW,EAAE,UAAU,EAAE,CAAC;IAC1B,QAAQ,EAAE,cAAc,CAAC;CAC1B;AAED,MAAM,WAAW,cAAc;IAC7B,gDAAgD;IAChD,IAAI,EAAE,MAAM,CAAC;IACb,mDAAmD;IACnD,KAAK,EAAE,MAAM,CAAC;IACd,gEAAgE;IAChE,uBAAuB,EAAE,OAAO,CAAC;CAClC;AAED,oFAAoF;AACpF,eAAO,MAAM,qBAAqB,UAAY,CAAC;AAE/C,wBAAgB,SAAS,CAAC,KAAK,EAAE,SAAS,EAAE,OAAO,GAAE,WAAgB,GAAG,cAAc,CA8DrF;AAiED,gEAAgE;AAChE,wBAAgB,QAAQ,CAAC,IAAI,EAAE,MAAM,GAAG,MAAM,CAE7C"}
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package/dist/convert/plan.js
CHANGED
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@@ -28,9 +28,20 @@ export function buildPlan(input, options = {}) {
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});
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const writeSignals = options.annotationsOnly !== true;
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let chosen = input.signals.filter((s) => !s.isAnnotations);
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-
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/*
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Channel names are checked even under --annotations-only, where the selection is not
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otherwise used.
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Skipping the check meant `--channels TYPO --annotations-only` exited 0 in silence while
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the same typo without the flag was a usage error, and `--channels ""` stayed an error
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in both — so a mistyped name was the one form of bad input the tool accepted quietly.
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Everywhere else a term matching nothing is reported rather than ignored; a flag that
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happens not to apply is a poor reason to make an exception.
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*/
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if (options.channels && options.channels.length > 0) {
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const selection = selectChannels(input.signals, options.channels);
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if (writeSignals)
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chosen = selection.signals;
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for (const { term, matched } of selection.ambiguous) {
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diagnostics.push({
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code: 'DUPLICATE_LABEL',
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package/dist/convert/plan.js.map
CHANGED
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{"version":3,"file":"plan.js","sourceRoot":"","sources":["../../src/convert/plan.ts"],"names":[],"mappings":"AAAA;;;;;;;;;GASG;AAIH,OAAO,EAAE,UAAU,EAAE,MAAM,kBAAkB,CAAC;AAC9C,OAAO,EAAE,iBAAiB,EAAE,MAAM,iBAAiB,CAAC;AACpD,OAAO,EAAE,YAAY,EAAE,MAAM,qBAAqB,CAAC;AACnD,OAAO,EAAE,gBAAgB,EAAE,cAAc,EAAE,MAAM,eAAe,CAAC;AACjE,OAAO,EAAE,mBAAmB,EAAE,YAAY,EAAE,MAAM,iBAAiB,CAAC;AA4DpE,oFAAoF;AACpF,MAAM,CAAC,MAAM,qBAAqB,GAAG,SAAS,CAAC;AAE/C,MAAM,UAAU,SAAS,CAAC,KAAgB,EAAE,UAAuB,EAAE;IACnE,MAAM,WAAW,GAAiB,EAAE,CAAC;IACrC,MAAM,WAAW,GAAG,gBAAgB,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC;IAEpD,MAAM,KAAK,GAAG,YAAY,CAAC;QACzB,KAAK,EAAE,OAAO,CAAC,KAAK;QACpB,QAAQ,EAAE,OAAO,CAAC,QAAQ;QAC1B,GAAG,EAAE,OAAO,CAAC,GAAG;QAChB,cAAc,EAAE,KAAK,CAAC,cAAc;QACpC,WAAW,EAAE,KAAK,CAAC,WAAW;QAC9B,YAAY,EAAE,KAAK,CAAC,YAAY;KACjC,CAAC,CAAC;IAEH,MAAM,YAAY,GAAG,OAAO,CAAC,eAAe,KAAK,IAAI,CAAC;IAEtD,IAAI,MAAM,GAAgB,KAAK,CAAC,OAAO,CAAC,MAAM,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,aAAa,CAAC,CAAC;
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+
{"version":3,"file":"plan.js","sourceRoot":"","sources":["../../src/convert/plan.ts"],"names":[],"mappings":"AAAA;;;;;;;;;GASG;AAIH,OAAO,EAAE,UAAU,EAAE,MAAM,kBAAkB,CAAC;AAC9C,OAAO,EAAE,iBAAiB,EAAE,MAAM,iBAAiB,CAAC;AACpD,OAAO,EAAE,YAAY,EAAE,MAAM,qBAAqB,CAAC;AACnD,OAAO,EAAE,gBAAgB,EAAE,cAAc,EAAE,MAAM,eAAe,CAAC;AACjE,OAAO,EAAE,mBAAmB,EAAE,YAAY,EAAE,MAAM,iBAAiB,CAAC;AA4DpE,oFAAoF;AACpF,MAAM,CAAC,MAAM,qBAAqB,GAAG,SAAS,CAAC;AAE/C,MAAM,UAAU,SAAS,CAAC,KAAgB,EAAE,UAAuB,EAAE;IACnE,MAAM,WAAW,GAAiB,EAAE,CAAC;IACrC,MAAM,WAAW,GAAG,gBAAgB,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC;IAEpD,MAAM,KAAK,GAAG,YAAY,CAAC;QACzB,KAAK,EAAE,OAAO,CAAC,KAAK;QACpB,QAAQ,EAAE,OAAO,CAAC,QAAQ;QAC1B,GAAG,EAAE,OAAO,CAAC,GAAG;QAChB,cAAc,EAAE,KAAK,CAAC,cAAc;QACpC,WAAW,EAAE,KAAK,CAAC,WAAW;QAC9B,YAAY,EAAE,KAAK,CAAC,YAAY;KACjC,CAAC,CAAC;IAEH,MAAM,YAAY,GAAG,OAAO,CAAC,eAAe,KAAK,IAAI,CAAC;IAEtD,IAAI,MAAM,GAAgB,KAAK,CAAC,OAAO,CAAC,MAAM,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,aAAa,CAAC,CAAC;IAExE;;;;;;;;;MASE;IACF,IAAI,OAAO,CAAC,QAAQ,IAAI,OAAO,CAAC,QAAQ,CAAC,MAAM,GAAG,CAAC,EAAE,CAAC;QACpD,MAAM,SAAS,GAAG,cAAc,CAAC,KAAK,CAAC,OAAO,EAAE,OAAO,CAAC,QAAQ,CAAC,CAAC;QAClE,IAAI,YAAY;YAAE,MAAM,GAAG,SAAS,CAAC,OAAO,CAAC;QAC7C,KAAK,MAAM,EAAE,IAAI,EAAE,OAAO,EAAE,IAAI,SAAS,CAAC,SAAS,EAAE,CAAC;YACpD,WAAW,CAAC,IAAI,CAAC;gBACf,IAAI,EAAE,iBAAiB;gBACvB,QAAQ,EAAE,SAAS;gBACnB,OAAO,EACL,IAAI,IAAI,aAAa,OAAO,CAAC,MAAM,uBAAuB;oBAC1D,GAAG,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,IAAI,CAAC,CAAC,KAAK,EAAE,CAAC,CAAC,IAAI,CAAC,IAAI,CAAC,+BAA+B;gBAChF,IAAI,EAAE,oBAAoB,OAAO,CAAC,CAAC,CAAC,EAAE,KAAK,IAAI,CAAC,qBAAqB;aACtE,CAAC,CAAC;QACL,CAAC;IACH,CAAC;IAED,MAAM,MAAM,GAAG,YAAY,CAAC,CAAC,CAAC,WAAW,CAAC,MAAM,EAAE,WAAW,EAAE,OAAO,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC;IACtF,MAAM,QAAQ,GAAG,cAAc,CAC7B,MAAM,EACN,KAAK,EACL,KAAK,CAAC,cAAc,EACpB,KAAK,CAAC,YAAY,CACnB,CAAC;IAEF,IAAI,QAAQ,CAAC,uBAAuB,EAAE,CAAC;QACrC,WAAW,CAAC,IAAI,CAAC;YACf,IAAI,EAAE,cAAc;YACpB,QAAQ,EAAE,SAAS;YACnB,OAAO,EACL,gDAAgD,qBAAqB,CAAC,cAAc,CAAC,OAAO,CAAC,GAAG;gBAChG,qDAAqD;YACvD,IAAI,EAAE,qFAAqF;SAC5F,CAAC,CAAC;IACL,CAAC;IAED,OAAO,EAAE,MAAM,EAAE,KAAK,EAAE,WAAW,EAAE,YAAY,EAAE,WAAW,EAAE,QAAQ,EAAE,CAAC;AAC7E,CAAC;AAED;;;;;;GAMG;AACH,SAAS,WAAW,CAClB,OAA6B,EAC7B,WAAgC,EAChC,cAAkC;IAElC,MAAM,MAAM,GAAG,IAAI,GAAG,EAAuB,CAAC;IAC9C,KAAK,MAAM,MAAM,IAAI,OAAO,EAAE,CAAC;QAC7B,wEAAwE;QACxE,2EAA2E;QAC3E,IAAI,MAAM,CAAC,gBAAgB,KAAK,CAAC;YAAE,SAAS;QAC5C,MAAM,MAAM,GAAG,MAAM,CAAC,GAAG,CAAC,MAAM,CAAC,YAAY,CAAC,CAAC;QAC/C,IAAI,MAAM;YAAE,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC;;YAC3B,MAAM,CAAC,GAAG,CAAC,MAAM,CAAC,YAAY,EAAE,CAAC,MAAM,CAAC,CAAC,CAAC;IACjD,CAAC;IAED,MAAM,KAAK,GAAG,CAAC,GAAG,MAAM,CAAC,IAAI,EAAE,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,EAAE,EAAE,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC;IACvD,MAAM,MAAM,GAAG,KAAK,CAAC,MAAM,KAAK,CAAC,CAAC;IAElC;;;;;;;;;;;MAWE;IACF,MAAM,IAAI,GAAG,IAAI,GAAG,EAAU,CAAC;IAC/B,MAAM,UAAU,GAAG,CAAC,IAAY,EAAU,EAAE;QAC1C,MAAM,IAAI,GAAG,WAAW,QAAQ,CAAC,IAAI,CAAC,EAAE,CAAC;QACzC,IAAI,IAAI,GAAG,GAAG,IAAI,MAAM,CAAC;QACzB,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,IAAI,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE,CAAC,EAAE;YAAE,IAAI,GAAG,GAAG,IAAI,IAAI,CAAC,MAAM,CAAC;QAC/D,IAAI,CAAC,GAAG,CAAC,IAAI,CAAC,CAAC;QACf,OAAO,IAAI,CAAC;IACd,CAAC,CAAC;IAEF,OAAO,KAAK,CAAC,GAAG,CAAC,CAAC,IAAI,EAAE,EAAE;QACxB,MAAM,OAAO,GAAG,MAAM,CAAC,GAAG,CAAC,IAAI,CAAC,IAAI,EAAE,CAAC;QACvC,MAAM,KAAK,GAAG,OAAO,CAAC,CAAC,CAAC,CAAC;QACzB,OAAO;YACL,IAAI;YACJ,gBAAgB,EAAE,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,gBAAgB,CAAC,CAAC,CAAC,CAAC;YACpD,QAAQ,EAAE,MAAM,CAAC,CAAC,CAAC,aAAa,CAAC,CAAC,CAAC,UAAU,CAAC,IAAI,CAAC;YACnD,YAAY,EAAE,YAAY,CAAC,IAAI,CAAC;YAChC,QAAQ,EAAE,OAAO,CAAC,GAAG,CAAC,CAAC,MAAM,EAAE,EAAE,CAAC,CAAC;gBACjC,MAAM;gBACN,MAAM,EAAE,WAAW,CAAC,GAAG,CAAC,MAAM,CAAC,KAAK,CAAC,IAAI,UAAU,MAAM,CAAC,KAAK,EAAE;gBACjE,QAAQ,EAAE,cAAc,IAAI,iBAAiB,CAAC,MAAM,CAAC;aACtD,CAAC,CAAC;SACJ,CAAC;IACJ,CAAC,CAAC,CAAC;AACL,CAAC;AAED,gEAAgE;AAChE,MAAM,UAAU,QAAQ,CAAC,IAAY;IACnC,OAAO,GAAG,UAAU,CAAC,IAAI,CAAC,CAAC,OAAO,CAAC,GAAG,EAAE,GAAG,CAAC,IAAI,CAAC;AACnD,CAAC;AAED,SAAS,cAAc,CACrB,MAA4B,EAC5B,KAAoB,EACpB,cAAsB,EACtB,YAA6C;IAE7C,IAAI,IAAI,GAAG,CAAC,CAAC;IACb,IAAI,KAAK,GAAG,CAAC,CAAC;IACd,IAAI,OAAO,GAAG,KAAK,CAAC;IAEpB,KAAK,MAAM,KAAK,IAAI,MAAM,EAAE,CAAC;QAC3B,IAAI,SAAS,GAAG,CAAC,CAAC;QAClB,KAAK,IAAI,MAAM,GAAG,KAAK,CAAC,WAAW,EAAE,MAAM,GAAG,KAAK,CAAC,SAAS,EAAE,MAAM,EAAE,EAAE,CAAC;YACxE,MAAM,WAAW,GAAG,YAAY;gBAC9B,CAAC,CAAC,CAAC,YAAY,CAAC,MAAM,CAAC,IAAI,MAAM,GAAG,cAAc,CAAC;gBACnD,CAAC,CAAC,MAAM,GAAG,cAAc,CAAC;YAC5B,SAAS,IAAI,mBAAmB,CAAC;gBAC/B,WAAW;gBACX,IAAI,EAAE,KAAK,CAAC,IAAI;gBAChB,gBAAgB,EAAE,KAAK,CAAC,gBAAgB;gBACxC,YAAY,EAAE,KAAK,CAAC,YAAY;gBAChC,UAAU,EAAE,KAAK,CAAC,UAAU;aAC7B,CAAC,CAAC;QACL,CAAC;QACD,IAAI,IAAI,SAAS,CAAC;QAClB,IAAI,SAAS,GAAG,CAAC,GAAG,qBAAqB;YAAE,OAAO,GAAG,IAAI,CAAC;QAE1D,gFAAgF;QAChF,MAAM,SAAS,GAAG,KAAK,CAAC,YAAY,GAAG,CAAC,CAAC;QACzC,MAAM,SAAS,GAAG,KAAK,CAAC,QAAQ,CAAC,MAAM,CAAC,CAAC,GAAG,EAAE,CAAC,EAAE,EAAE,CAAC,GAAG,GAAG,CAAC,CAAC,QAAQ,GAAG,CAAC,EAAE,CAAC,CAAC,CAAC;QAC7E,KAAK,IAAI,SAAS,GAAG,CAAC,SAAS,GAAG,SAAS,GAAG,CAAC,CAAC,CAAC;IACnD,CAAC;IAED,OAAO,EAAE,IAAI,EAAE,KAAK,EAAE,uBAAuB,EAAE,OAAO,EAAE,CAAC;AAC3D,CAAC"}
|
package/dist/convert/run.js
CHANGED
|
@@ -262,6 +262,24 @@ async function streamSignalRows(file, plan, open, recordStarts, options) {
|
|
|
262
262
|
await entry.writer.end();
|
|
263
263
|
return open.map((entry) => ({ name: entry.group.fileName, rows: entry.rows }));
|
|
264
264
|
}
|
|
265
|
+
/**
|
|
266
|
+
* Write one of the sidecar files, reporting a failure the way the signal writer does.
|
|
267
|
+
*
|
|
268
|
+
* These three used to call `writeFile` bare, so a failure escaped as whatever the
|
|
269
|
+
* filesystem said — `EISDIR: illegal operation on a directory, open '...'` with no hint
|
|
270
|
+
* and, more importantly, no mention that the signal files had already been written. The
|
|
271
|
+
* conversion stopped half-done and the message gave no sign of it.
|
|
272
|
+
*/
|
|
273
|
+
async function writeOutputFile(outputDir, name, contents) {
|
|
274
|
+
try {
|
|
275
|
+
await writeFile(path.join(outputDir, name), contents, 'utf8');
|
|
276
|
+
}
|
|
277
|
+
catch (cause) {
|
|
278
|
+
const detail = cause instanceof Error ? cause.message : String(cause);
|
|
279
|
+
throw new ConversionError('WRITE_FAILED', `Writing "${name}" to "${outputDir}" failed: ${detail}`, 'The files written so far are incomplete and should not be used. Free up space or ' +
|
|
280
|
+
'choose another destination with --out, then run the conversion again.');
|
|
281
|
+
}
|
|
282
|
+
}
|
|
265
283
|
async function writeChannelsCsv(outputDir, file, plan) {
|
|
266
284
|
const includedColumns = new Set(plan.groups.flatMap((g) => g.channels.map((c) => c.signal.index)));
|
|
267
285
|
const fileFor = new Map();
|
|
@@ -308,7 +326,7 @@ async function writeChannelsCsv(outputDir, file, plan) {
|
|
|
308
326
|
includedColumns.has(signal.index) ? 'yes' : 'no',
|
|
309
327
|
]));
|
|
310
328
|
}
|
|
311
|
-
await
|
|
329
|
+
await writeOutputFile(outputDir, 'channels.csv', lines.join('\n') + '\n');
|
|
312
330
|
return { name: 'channels.csv', rows: lines.length - 1 };
|
|
313
331
|
}
|
|
314
332
|
async function writeAnnotationsCsv(outputDir, annotations, plan, windowRequested) {
|
|
@@ -338,7 +356,7 @@ async function writeAnnotationsCsv(outputDir, annotations, plan, windowRequested
|
|
|
338
356
|
String(annotation.recordIndex),
|
|
339
357
|
]));
|
|
340
358
|
}
|
|
341
|
-
await
|
|
359
|
+
await writeOutputFile(outputDir, 'annotations.csv', lines.join('\n') + '\n');
|
|
342
360
|
return { name: 'annotations.csv', rows: inWindow.length };
|
|
343
361
|
}
|
|
344
362
|
async function writeMetadata(outputDir, inputPath, file, plan, written, annotationCount, options) {
|
|
@@ -389,7 +407,7 @@ async function writeMetadata(outputDir, inputPath, file, plan, written, annotati
|
|
|
389
407
|
message: d.message,
|
|
390
408
|
})),
|
|
391
409
|
};
|
|
392
|
-
await
|
|
410
|
+
await writeOutputFile(outputDir, 'metadata.json', JSON.stringify(metadata, null, 2) + '\n');
|
|
393
411
|
}
|
|
394
412
|
async function sha256(filePath) {
|
|
395
413
|
const hash = createHash('sha256');
|
package/dist/convert/run.js.map
CHANGED
|
@@ -1 +1 @@
|
|
|
1
|
-
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1
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+
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package/package.json
CHANGED