edf2csv 0.2.14 → 0.2.15

package/CHANGELOG.md

@@ -3,6 +3,21 @@
 Notable changes to edf2csv. Versions follow [semantic versioning](https://semver.org); while the
 major version is 0, a minor bump may contain breaking changes.
 
+## 0.2.15
+
+### Fixed: a physical range too wide to represent was converted silently
+
+EDF's physical range fields are eight ASCII characters and accept exponent form, so a header may
+declare `-1e308` to `1e308`. The span of that range overflows a double, leaving no gain to compute —
+but the scaler treated a non-finite gain the same as a flat one and returned the physical minimum,
+so every distinct sample in the channel came out as the same 300-digit constant. No diagnostic was
+raised, in `--info` or in `metadata.json`.
+
+This is the same undefined-mapping case as `digitalMin === digitalMax`, and it now behaves the same
+way: the cells are left empty and a new `UNUSABLE_PHYSICAL_RANGE` warning names the channel. A
+genuinely flat range (`physicalMin === physicalMax`) is still a defined mapping and still writes its
+constant.
+
 ## 0.2.14
 
 ### Changed: a repeated unit in a time value is now an error

package/dist/edf/errors.d.ts

@@ -6,7 +6,7 @@
  * we can continue, but the user needs to know something about their data that
  * they would not otherwise see.
  */
-export type DiagnosticCode = 'MIXED_SAMPLING_RATES' | 'DISCONTINUOUS' | 'RECORD_COUNT_UNKNOWN' | 'RECORD_COUNT_MISMATCH' | 'TRAILING_BYTES' | 'DEGENERATE_DIGITAL_RANGE' | 'DEGENERATE_PHYSICAL_RANGE' | 'INVERTED_PHYSICAL_RANGE' | 'DUPLICATE_LABEL' | 'EMPTY_LABEL' | 'NONSTANDARD_UNIT' | 'NO_ANNOTATIONS' | 'ANNOTATION_DECODE_FAILED' | 'COMMA_DECIMAL' | 'LARGE_OUTPUT' | 'NO_SIGNAL_CHANNELS' | 'NO_SAMPLES' | 'STALE_OUTPUT' | 'HEADER_BYTES_MISMATCH' | 'NONPRINTABLE_LABEL';
+export type DiagnosticCode = 'MIXED_SAMPLING_RATES' | 'DISCONTINUOUS' | 'RECORD_COUNT_UNKNOWN' | 'RECORD_COUNT_MISMATCH' | 'TRAILING_BYTES' | 'DEGENERATE_DIGITAL_RANGE' | 'DEGENERATE_PHYSICAL_RANGE' | 'UNUSABLE_PHYSICAL_RANGE' | 'INVERTED_PHYSICAL_RANGE' | 'DUPLICATE_LABEL' | 'EMPTY_LABEL' | 'NONSTANDARD_UNIT' | 'NO_ANNOTATIONS' | 'ANNOTATION_DECODE_FAILED' | 'COMMA_DECIMAL' | 'LARGE_OUTPUT' | 'NO_SIGNAL_CHANNELS' | 'NO_SAMPLES' | 'STALE_OUTPUT' | 'HEADER_BYTES_MISMATCH' | 'NONPRINTABLE_LABEL';
 export interface Diagnostic {
     code: DiagnosticCode;
     severity: 'warning' | 'info';

package/dist/edf/errors.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"errors.d.ts","sourceRoot":"","sources":["../../src/edf/errors.ts"],"names":[],"mappings":"AAAA;;;;;;;GAOG;AAEH,MAAM,MAAM,cAAc,GACtB,sBAAsB,GACtB,eAAe,GACf,sBAAsB,GACtB,uBAAuB,GACvB,gBAAgB,GAChB,0BAA0B,GAC1B,2BAA2B,GAC3B,yBAAyB,GACzB,yBAAyB,GACzB,iBAAiB,GACjB,aAAa,GACb,kBAAkB,GAClB,gBAAgB,GAChB,0BAA0B,GAC1B,eAAe,GACf,cAAc,GACd,oBAAoB,GACpB,YAAY,GACZ,cAAc,GACd,uBAAuB,GACvB,oBAAoB,CAAC;AAEzB,MAAM,WAAW,UAAU;IACzB,IAAI,EAAE,cAAc,CAAC;IACrB,QAAQ,EAAE,SAAS,GAAG,MAAM,CAAC;IAC7B,OAAO,EAAE,MAAM,CAAC;IAChB,kFAAkF;IAClF,IAAI,CAAC,EAAE,MAAM,CAAC;CACf;AAED,MAAM,MAAM,YAAY,GACpB,gBAAgB,GAChB,kBAAkB,GAClB,iBAAiB,GACjB,sBAAsB,GACtB,yBAAyB,GACzB,YAAY,GACZ,YAAY,CAAC;AAEjB;;;GAGG;AACH,qBAAa,QAAS,SAAQ,KAAK;IACjC,QAAQ,CAAC,IAAI,EAAE,YAAY,CAAC;IAC5B,QAAQ,CAAC,IAAI,EAAE,MAAM,GAAG,SAAS,CAAC;gBAEtB,IAAI,EAAE,YAAY,EAAE,OAAO,EAAE,MAAM,EAAE,IAAI,CAAC,EAAE,MAAM;CAM/D"}

package/dist/edf/errors.js.map

@@ -1 +1 @@
-{"version":3,"file":"errors.js","sourceRoot":"","sources":["../../src/edf/errors.ts"],"names":[],"mappings":"AAAA;;;;;;;GAOG;AAyCH;;;GAGG;AACH,MAAM,OAAO,QAAS,SAAQ,KAAK;IACxB,IAAI,CAAe;IACnB,IAAI,CAAqB;IAElC,YAAY,IAAkB,EAAE,OAAe,EAAE,IAAa;QAC5D,KAAK,CAAC,OAAO,CAAC,CAAC;QACf,IAAI,CAAC,IAAI,GAAG,UAAU,CAAC;QACvB,IAAI,CAAC,IAAI,GAAG,IAAI,CAAC;QACjB,IAAI,CAAC,IAAI,GAAG,IAAI,CAAC;IACnB,CAAC;CACF"}
+{"version":3,"file":"errors.js","sourceRoot":"","sources":["../../src/edf/errors.ts"],"names":[],"mappings":"AAAA;;;;;;;GAOG;AA0CH;;;GAGG;AACH,MAAM,OAAO,QAAS,SAAQ,KAAK;IACxB,IAAI,CAAe;IACnB,IAAI,CAAqB;IAElC,YAAY,IAAkB,EAAE,OAAe,EAAE,IAAa;QAC5D,KAAK,CAAC,OAAO,CAAC,CAAC;QACf,IAAI,CAAC,IAAI,GAAG,UAAU,CAAC;QACvB,IAAI,CAAC,IAAI,GAAG,IAAI,CAAC;QACjB,IAAI,CAAC,IAAI,GAAG,IAAI,CAAC;IACnB,CAAC;CACF"}

package/dist/edf/header.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"header.d.ts","sourceRoot":"","sources":["../../src/edf/header.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;;;;;;;;;GA6BG;AAGH,OAAO,KAAK,EAAE,UAAU,EAAE,MAAM,aAAa,CAAC;AAG9C,gEAAgE;AAChE,eAAO,MAAM,iBAAiB,oBAAoB,CAAC;AACnD,uDAAuD;AACvD,eAAO,MAAM,qBAAqB,oBAAoB,CAAC;AAEvD,eAAO,MAAM,kBAAkB,MAAM,CAAC;AACtC,eAAO,MAAM,mBAAmB,MAAM,CAAC;AAEvC,MAAM,WAAW,SAAS;IACxB,sEAAsE;IACtE,KAAK,EAAE,MAAM,CAAC;IACd,KAAK,EAAE,MAAM,CAAC;IACd,UAAU,EAAE,MAAM,CAAC;IACnB,iBAAiB,EAAE,MAAM,CAAC;IAC1B,WAAW,EAAE,MAAM,CAAC;IACpB,WAAW,EAAE,MAAM,CAAC;IACpB,UAAU,EAAE,MAAM,CAAC;IACnB,UAAU,EAAE,MAAM,CAAC;IACnB,YAAY,EAAE,MAAM,CAAC;IACrB,gBAAgB,EAAE,MAAM,CAAC;IACzB,QAAQ,EAAE,MAAM,CAAC;IACjB,mFAAmF;IACnF,aAAa,EAAE,OAAO,CAAC;IACvB,gDAAgD;IAChD,YAAY,EAAE,MAAM,CAAC;IACrB,mEAAmE;IACnE,kBAAkB,EAAE,MAAM,CAAC;CAC5B;AAED,MAAM,WAAW,SAAS;IACxB,OAAO,EAAE,MAAM,CAAC;IAChB,SAAS,EAAE,MAAM,CAAC;IAClB,WAAW,EAAE,MAAM,CAAC;IACpB,6CAA6C;IAC7C,YAAY,EAAE,MAAM,CAAC;IACrB,6CAA6C;IAC7C,YAAY,EAAE,MAAM,CAAC;IACrB,qFAAqF;IACrF,aAAa,EAAE,IAAI,GAAG,IAAI,CAAC;IAC3B,WAAW,EAAE,MAAM,CAAC;IACpB,QAAQ,EAAE,MAAM,CAAC;IACjB,SAAS,EAAE,OAAO,CAAC;IACnB,gFAAgF;IAChF,KAAK,EAAE,OAAO,CAAC;IACf,wEAAwE;IACxE,UAAU,EAAE,OAAO,GAAG,OAAO,GAAG,IAAI,CAAC;IACrC,6EAA6E;IAC7E,mBAAmB,EAAE,MAAM,CAAC;IAC5B,cAAc,EAAE,MAAM,CAAC;IACvB,WAAW,EAAE,MAAM,CAAC;IACpB,OAAO,EAAE,SAAS,EAAE,CAAC;IACrB,cAAc,EAAE,MAAM,CAAC;IACvB,WAAW,EAAE,MAAM,CAAC;CACrB;AAED,4EAA4E;AAC5E,MAAM,WAAW,aAAa;IAC5B,MAAM,EAAE,SAAS,CAAC;IAClB,mFAAmF;IACnF,WAAW,EAAE,MAAM,CAAC;IACpB,iDAAiD;IACjD,aAAa,EAAE,MAAM,CAAC;IACtB,WAAW,EAAE,UAAU,EAAE,CAAC;CAC3B;AAgED;;;;;GAKG;AACH,wBAAgB,WAAW,CAAC,GAAG,EAAE,UAAU,EAAE,QAAQ,EAAE,MAAM,GAAG,aAAa,CAiV5E;AAED;;;;;;;;;;GAUG;AACH,wBAAgB,eAAe,CAAC,IAAI,EAAE,IAAI,GAAG,IAAI,GAAG,MAAM,GAAG,IAAI,CAGhE;AAED,oDAAoD;AACpD,wBAAgB,cAAc,CAAC,MAAM,EAAE,SAAS,GAAG,MAAM,CAIxD;AAED,qEAAqE;AACrE,wBAAgB,UAAU,CAAC,EAAE,EAAE,MAAM,GAAG,MAAM,CAS7C"}
+{"version":3,"file":"header.d.ts","sourceRoot":"","sources":["../../src/edf/header.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;;;;;;;;;GA6BG;AAGH,OAAO,KAAK,EAAE,UAAU,EAAE,MAAM,aAAa,CAAC;AAG9C,gEAAgE;AAChE,eAAO,MAAM,iBAAiB,oBAAoB,CAAC;AACnD,uDAAuD;AACvD,eAAO,MAAM,qBAAqB,oBAAoB,CAAC;AAEvD,eAAO,MAAM,kBAAkB,MAAM,CAAC;AACtC,eAAO,MAAM,mBAAmB,MAAM,CAAC;AAEvC,MAAM,WAAW,SAAS;IACxB,sEAAsE;IACtE,KAAK,EAAE,MAAM,CAAC;IACd,KAAK,EAAE,MAAM,CAAC;IACd,UAAU,EAAE,MAAM,CAAC;IACnB,iBAAiB,EAAE,MAAM,CAAC;IAC1B,WAAW,EAAE,MAAM,CAAC;IACpB,WAAW,EAAE,MAAM,CAAC;IACpB,UAAU,EAAE,MAAM,CAAC;IACnB,UAAU,EAAE,MAAM,CAAC;IACnB,YAAY,EAAE,MAAM,CAAC;IACrB,gBAAgB,EAAE,MAAM,CAAC;IACzB,QAAQ,EAAE,MAAM,CAAC;IACjB,mFAAmF;IACnF,aAAa,EAAE,OAAO,CAAC;IACvB,gDAAgD;IAChD,YAAY,EAAE,MAAM,CAAC;IACrB,mEAAmE;IACnE,kBAAkB,EAAE,MAAM,CAAC;CAC5B;AAED,MAAM,WAAW,SAAS;IACxB,OAAO,EAAE,MAAM,CAAC;IAChB,SAAS,EAAE,MAAM,CAAC;IAClB,WAAW,EAAE,MAAM,CAAC;IACpB,6CAA6C;IAC7C,YAAY,EAAE,MAAM,CAAC;IACrB,6CAA6C;IAC7C,YAAY,EAAE,MAAM,CAAC;IACrB,qFAAqF;IACrF,aAAa,EAAE,IAAI,GAAG,IAAI,CAAC;IAC3B,WAAW,EAAE,MAAM,CAAC;IACpB,QAAQ,EAAE,MAAM,CAAC;IACjB,SAAS,EAAE,OAAO,CAAC;IACnB,gFAAgF;IAChF,KAAK,EAAE,OAAO,CAAC;IACf,wEAAwE;IACxE,UAAU,EAAE,OAAO,GAAG,OAAO,GAAG,IAAI,CAAC;IACrC,6EAA6E;IAC7E,mBAAmB,EAAE,MAAM,CAAC;IAC5B,cAAc,EAAE,MAAM,CAAC;IACvB,WAAW,EAAE,MAAM,CAAC;IACpB,OAAO,EAAE,SAAS,EAAE,CAAC;IACrB,cAAc,EAAE,MAAM,CAAC;IACvB,WAAW,EAAE,MAAM,CAAC;CACrB;AAED,4EAA4E;AAC5E,MAAM,WAAW,aAAa;IAC5B,MAAM,EAAE,SAAS,CAAC;IAClB,mFAAmF;IACnF,WAAW,EAAE,MAAM,CAAC;IACpB,iDAAiD;IACjD,aAAa,EAAE,MAAM,CAAC;IACtB,WAAW,EAAE,UAAU,EAAE,CAAC;CAC3B;AAgED;;;;;GAKG;AACH,wBAAgB,WAAW,CAAC,GAAG,EAAE,UAAU,EAAE,QAAQ,EAAE,MAAM,GAAG,aAAa,CA0V5E;AAED;;;;;;;;;;GAUG;AACH,wBAAgB,eAAe,CAAC,IAAI,EAAE,IAAI,GAAG,IAAI,GAAG,MAAM,GAAG,IAAI,CAGhE;AAED,oDAAoD;AACpD,wBAAgB,cAAc,CAAC,MAAM,EAAE,SAAS,GAAG,MAAM,CAIxD;AAED,qEAAqE;AACrE,wBAAgB,UAAU,CAAC,EAAE,EAAE,MAAM,GAAG,MAAM,CAS7C"}

package/dist/edf/header.js

@@ -216,7 +216,16 @@ export function parseHeader(buf, fileSize) {
                     hint: 'It is described in channels.csv but left out of the converted data.',
                 });
             }
-            if (digitalMax === digitalMin) {
+            if (!Number.isFinite(physicalMax - physicalMin)) {
+                diagnostics.push({
+                    code: 'UNUSABLE_PHYSICAL_RANGE',
+                    severity: 'warning',
+                    message: `Signal ${i} ("${label}") declares a physical range from ${physicalMin} to ` +
+                        `${physicalMax}, whose span is too large to represent, so its values cannot be scaled.`,
+                    hint: 'Its cells are left empty rather than filled with a value the header cannot justify.',
+                });
+            }
+            else if (digitalMax === digitalMin) {
                 diagnostics.push({
                     code: 'DEGENERATE_DIGITAL_RANGE',
                     severity: 'warning',

package/dist/edf/header.js.map

@@ -1 +1 @@
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package/dist/edf/scale.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"scale.d.ts","sourceRoot":"","sources":["../../src/edf/scale.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;;;;GAwBG;AAEH,OAAO,KAAK,EAAE,SAAS,EAAE,MAAM,aAAa,CAAC;AAE7C,MAAM,MAAM,MAAM,GAAG,CAAC,OAAO,EAAE,MAAM,KAAK,MAAM,CAAC;AAEjD,wBAAgB,UAAU,CAAC,MAAM,EAAE,SAAS,GAAG,MAAM,CA8BpD;AAED;;;GAGG;AACH,wBAAgB,gBAAgB,CAAC,MAAM,EAAE,SAAS,GAAG,MAAM,CAI1D;AAED;;;;;;;;;;GAUG;AACH,wBAAgB,iBAAiB,CAAC,MAAM,EAAE,SAAS,EAAE,GAAG,SAAK,GAAG,MAAM,CAKrE"}
+{"version":3,"file":"scale.d.ts","sourceRoot":"","sources":["../../src/edf/scale.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;;;;GAwBG;AAEH,OAAO,KAAK,EAAE,SAAS,EAAE,MAAM,aAAa,CAAC;AAE7C,MAAM,MAAM,MAAM,GAAG,CAAC,OAAO,EAAE,MAAM,KAAK,MAAM,CAAC;AAEjD,wBAAgB,UAAU,CAAC,MAAM,EAAE,SAAS,GAAG,MAAM,CAqCpD;AAED;;;GAGG;AACH,wBAAgB,gBAAgB,CAAC,MAAM,EAAE,SAAS,GAAG,MAAM,CAI1D;AAED;;;;;;;;;;GAUG;AACH,wBAAgB,iBAAiB,CAAC,MAAM,EAAE,SAAS,EAAE,GAAG,SAAK,GAAG,MAAM,CAKrE"}

package/dist/edf/scale.js

@@ -38,9 +38,16 @@ export function makeScaler(signal) {
         return () => NaN;
     const gain = (physicalMax - physicalMin) / (digitalMax - digitalMin);
     // A flat physical range makes every sample the same value, and would divide by
-    // zero in the offset below.
-    if (gain === 0 || !Number.isFinite(gain))
+    // zero in the offset below. That mapping is defined, so its constant is written.
+    if (gain === 0)
         return () => physicalMin;
+    // A non-finite gain is a different thing: the physical span overflowed a double, so
+    // there is no mapping at all. Returning physicalMin filled the column with one enormous
+    // constant — every distinct sample rendered as the same 300-digit number — and raised
+    // nothing. NaN takes the same route as a degenerate digital range: empty cells, plus
+    // UNUSABLE_PHYSICAL_RANGE from the header parser.
+    if (!Number.isFinite(gain))
+        return () => NaN;
     // Deriving the offset divides by the gain. For every realistic calibration that is
     // both safe and more accurate, but an absurd header (a huge physical range over a
     // near-zero gain) could overflow it, so fall back to the specification's own

package/dist/edf/scale.js.map

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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "edf2csv",
-  "version": "0.2.14",
+  "version": "0.2.15",
   "description": "Convert EDF, EDF+ and BDF biosignal recordings (European Data Format) to CSV from the command line. Local, streaming, and never resamples or alters units.",
   "keywords": [
     "edf",