drugflow-molstar 0.3.34 → 0.3.36

package/build/drugflow-molstar-plugin-0.3.36.js.LICENSE.txt

@@ -0,0 +1,39 @@
+/**
+ * @license React
+ * react-dom.production.min.js
+ *
+ * Copyright (c) Facebook, Inc. and its affiliates.
+ *
+ * This source code is licensed under the MIT license found in the
+ * LICENSE file in the root directory of this source tree.
+ */
+
+/**
+ * @license React
+ * react-jsx-runtime.production.min.js
+ *
+ * Copyright (c) Facebook, Inc. and its affiliates.
+ *
+ * This source code is licensed under the MIT license found in the
+ * LICENSE file in the root directory of this source tree.
+ */
+
+/**
+ * @license React
+ * react.production.min.js
+ *
+ * Copyright (c) Facebook, Inc. and its affiliates.
+ *
+ * This source code is licensed under the MIT license found in the
+ * LICENSE file in the root directory of this source tree.
+ */
+
+/**
+ * @license React
+ * scheduler.production.min.js
+ *
+ * Copyright (c) Facebook, Inc. and its affiliates.
+ *
+ * This source code is licensed under the MIT license found in the
+ * LICENSE file in the root directory of this source tree.
+ */

package/lib/drugflow-molstar-component-build-0.3.35.js

@@ -0,0 +1,2 @@
+/*! For license information please see drugflow-molstar-component-build-0.3.35.js.LICENSE.txt */
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package/lib/drugflow-molstar-component-build-0.3.35.js.LICENSE.txt

@@ -0,0 +1,24 @@
+/**
+ * @license
+ * Copyright (c) 2017 The Polymer Project Authors. All rights reserved.
+ * This code may only be used under the BSD style license found at
+ * http://polymer.github.io/LICENSE.txt
+ * The complete set of authors may be found at
+ * http://polymer.github.io/AUTHORS.txt
+ * The complete set of contributors may be found at
+ * http://polymer.github.io/CONTRIBUTORS.txt
+ * Code distributed by Google as part of the polymer project is also
+ * subject to an additional IP rights grant found at
+ * http://polymer.github.io/PATENTS.txt
+ */
+
+/**
+@license
+Copyright (c) 2019 The Polymer Project Authors. All rights reserved.
+This code may only be used under the BSD style license found at
+http://polymer.github.io/LICENSE.txt The complete set of authors may be found at
+http://polymer.github.io/AUTHORS.txt The complete set of contributors may be
+found at http://polymer.github.io/CONTRIBUTORS.txt Code distributed by Google as
+part of the polymer project is also subject to an additional IP rights grant
+found at http://polymer.github.io/PATENTS.txt
+*/

package/lib/drugflow-molstar-component-build-0.3.36.js

@@ -0,0 +1,2 @@
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package/lib/drugflow-molstar-component-build-0.3.36.js.LICENSE.txt

@@ -0,0 +1,24 @@
+/**
+ * @license
+ * Copyright (c) 2017 The Polymer Project Authors. All rights reserved.
+ * This code may only be used under the BSD style license found at
+ * http://polymer.github.io/LICENSE.txt
+ * The complete set of authors may be found at
+ * http://polymer.github.io/AUTHORS.txt
+ * The complete set of contributors may be found at
+ * http://polymer.github.io/CONTRIBUTORS.txt
+ * Code distributed by Google as part of the polymer project is also
+ * subject to an additional IP rights grant found at
+ * http://polymer.github.io/PATENTS.txt
+ */
+
+/**
+@license
+Copyright (c) 2019 The Polymer Project Authors. All rights reserved.
+This code may only be used under the BSD style license found at
+http://polymer.github.io/LICENSE.txt The complete set of authors may be found at
+http://polymer.github.io/AUTHORS.txt The complete set of contributors may be
+found at http://polymer.github.io/CONTRIBUTORS.txt Code distributed by Google as
+part of the polymer project is also subject to an additional IP rights grant
+found at http://polymer.github.io/PATENTS.txt
+*/

package/lib/index.js

@@ -544,6 +544,36 @@ var DrugflowMolstarPlugin = /** @class */ (function () {
                 var loci = _this.getLociForParams(params, structureNumber);
                 _this.plugin.managers.camera.focusLoci(loci);
             },
+            get_current_loci: function () { return tslib_1.__awaiter(_this, void 0, void 0, function () {
+                var current_query, data, ret;
+                var _this = this;
+                return tslib_1.__generator(this, function (_b) {
+                    switch (_b.label) {
+                        case 0:
+                            current_query = structure_selection_query_1.StructureSelectionQueries.current;
+                            data = this.plugin.state.data.select(this.assemblyRef)[0].obj.data;
+                            ret = loci_1.EmptyLoci;
+                            return [4 /*yield*/, this.plugin.runTask(mol_task_1.Task.create('Structure Selection', function (runtime) { return tslib_1.__awaiter(_this, void 0, void 0, function () {
+                                    var current_selection;
+                                    return tslib_1.__generator(this, function (_b) {
+                                        switch (_b.label) {
+                                            case 0: return [4 /*yield*/, current_query.getSelection(this.plugin, runtime, data)];
+                                            case 1:
+                                                current_selection = _b.sent();
+                                                ret = structure_1.StructureSelection.toLociWithSourceUnits(current_selection);
+                                                return [2 /*return*/];
+                                        }
+                                    });
+                                }); }))];
+                        case 1:
+                            _b.sent();
+                            return [2 /*return*/, ret];
+                    }
+                });
+            }); },
+            focus_loci: function (loci) {
+                _this.plugin.managers.camera.focusLoci(loci);
+            },
             focus_now: function () { return tslib_1.__awaiter(_this, void 0, void 0, function () {
                 var current_query, data;
                 var _this = this;
@@ -790,15 +820,14 @@ var DrugflowMolstarPlugin = /** @class */ (function () {
             });
         });
     };
-    DrugflowMolstarPlugin.prototype.create_tmp_surf_comp = function () {
+    DrugflowMolstarPlugin.prototype.create_surf_comp = function (name) {
+        if (name === void 0) { name = 'tmp'; }
         return tslib_1.__awaiter(this, void 0, void 0, function () {
             var current_query, data;
             var _this = this;
             return tslib_1.__generator(this, function (_b) {
                 switch (_b.label) {
-                    case 0: return [4 /*yield*/, this.remove_tmp_comp('Surface_tmp')];
-                    case 1:
-                        _b.sent();
+                    case 0:
                         current_query = structure_selection_query_1.StructureSelectionQueries.current;
                         data = this.plugin.state.data.select(this.assemblyRef)[0].obj.data;
                         return [4 /*yield*/, this.plugin.runTask(mol_task_1.Task.create('Create Surface', function (runtime) { return tslib_1.__awaiter(_this, void 0, void 0, function () {
@@ -812,7 +841,7 @@ var DrugflowMolstarPlugin = /** @class */ (function () {
                                             selection = _b.sent();
                                             loci = structure_1.StructureSelection.toLociWithSourceUnits(selection);
                                             expression = structure_2.StructureElement.Loci.toExpression(loci);
-                                            s_new.apply(transforms_1.StateTransforms.Model.StructureComponent, { type: { name: 'expression', params: expression } }, { ref: 'Surface_tmp' });
+                                            s_new.apply(transforms_1.StateTransforms.Model.StructureComponent, { type: { name: 'expression', params: expression } }, { ref: 'Surface_' + name });
                                             return [4 /*yield*/, this.applyState(s_new)];
                                         case 2:
                                             _b.sent();
@@ -820,7 +849,7 @@ var DrugflowMolstarPlugin = /** @class */ (function () {
                                     }
                                 });
                             }); }))];
-                    case 2:
+                    case 1:
                         _b.sent();
                         return [2 /*return*/];
                 }

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "drugflow-molstar",
-  "version": "0.3.34",
+  "version": "0.3.36",
   "description": "Molstar implementation for DrugFlow",
   "main": "index.js",
   "scripts": {