driftdetect-core 0.1.3 → 0.3.0

package/dist/dna/gene-extractors/animation-approach.js

@@ -0,0 +1,97 @@
+/**
+ * Animation Approach Gene Extractor
+ *
+ * Detects how the codebase implements animations and transitions.
+ */
+import { BaseGeneExtractor } from './base-extractor.js';
+export class AnimationApproachExtractor extends BaseGeneExtractor {
+    geneId = 'animation-approach';
+    geneName = 'Animation Approach';
+    geneDescription = 'How animations and transitions are implemented';
+    getAlleleDefinitions() {
+        return [
+            {
+                id: 'tailwind-transitions',
+                name: 'Tailwind Transitions',
+                description: 'Using Tailwind transition utilities',
+                patterns: [
+                    /className\s*=\s*["'`][^"'`]*\btransition-/,
+                    /className\s*=\s*["'`][^"'`]*\bduration-/,
+                    /className\s*=\s*["'`][^"'`]*\bease-/,
+                    /className\s*=\s*["'`][^"'`]*\banimate-/,
+                ],
+            },
+            {
+                id: 'framer-motion',
+                name: 'Framer Motion',
+                description: 'Using Framer Motion library',
+                patterns: [/<motion\./, /useAnimation\s*\(/, /useSpring\s*\(/],
+                importPatterns: [/from\s+['"]framer-motion['"]/],
+            },
+            {
+                id: 'css-animations',
+                name: 'CSS Animations',
+                description: 'Using CSS @keyframes',
+                patterns: [/@keyframes\s+\w+/, /animation\s*:\s*\w+/],
+            },
+            {
+                id: 'css-transitions',
+                name: 'CSS Transitions',
+                description: 'Using CSS transition property',
+                patterns: [/transition\s*:\s*[^;]+;/, /transition-property\s*:/],
+            },
+            {
+                id: 'react-spring',
+                name: 'React Spring',
+                description: 'Using React Spring library',
+                patterns: [/useSpring\s*\(/, /animated\./],
+                importPatterns: [/from\s+['"]@react-spring/],
+            },
+            {
+                id: 'no-animation',
+                name: 'No Animation',
+                description: 'No animation patterns detected',
+                patterns: [],
+            },
+        ];
+    }
+    extractFromFile(filePath, content, imports) {
+        const detectedAlleles = [];
+        const isComponent = this.isComponentFile(filePath, content);
+        for (const def of this.getAlleleDefinitions()) {
+            if (def.id === 'no-animation')
+                continue;
+            // Check import patterns
+            if (def.importPatterns) {
+                for (const importPattern of def.importPatterns) {
+                    if (imports.some(imp => importPattern.test(imp))) {
+                        detectedAlleles.push({
+                            alleleId: def.id,
+                            line: 1,
+                            code: imports.find(imp => importPattern.test(imp)) ?? '',
+                            confidence: 0.9,
+                        });
+                        break;
+                    }
+                }
+            }
+            // Check content patterns
+            for (const pattern of def.patterns) {
+                const match = pattern.exec(content);
+                if (match) {
+                    const ctx = this.extractContext(content, match.index);
+                    detectedAlleles.push({
+                        alleleId: def.id,
+                        line: ctx.line,
+                        code: ctx.code,
+                        confidence: 0.8,
+                        context: ctx.context,
+                    });
+                    break;
+                }
+            }
+        }
+        return { file: filePath, detectedAlleles, isComponent };
+    }
+}
+//# sourceMappingURL=animation-approach.js.map

package/dist/dna/gene-extractors/animation-approach.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"animation-approach.js","sourceRoot":"","sources":["../../../src/dna/gene-extractors/animation-approach.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAEH,OAAO,EAAE,iBAAiB,EAAyE,MAAM,qBAAqB,CAAC;AAG/H,MAAM,OAAO,0BAA2B,SAAQ,iBAAiB;IACtD,MAAM,GAAW,oBAAoB,CAAC;IACtC,QAAQ,GAAG,oBAAoB,CAAC;IAChC,eAAe,GAAG,gDAAgD,CAAC;IAE5E,oBAAoB;QAClB,OAAO;YACL;gBACE,EAAE,EAAE,sBAAsB;gBAC1B,IAAI,EAAE,sBAAsB;gBAC5B,WAAW,EAAE,qCAAqC;gBAClD,QAAQ,EAAE;oBACR,2CAA2C;oBAC3C,yCAAyC;oBACzC,qCAAqC;oBACrC,wCAAwC;iBACzC;aACF;YACD;gBACE,EAAE,EAAE,eAAe;gBACnB,IAAI,EAAE,eAAe;gBACrB,WAAW,EAAE,6BAA6B;gBAC1C,QAAQ,EAAE,CAAC,WAAW,EAAE,mBAAmB,EAAE,gBAAgB,CAAC;gBAC9D,cAAc,EAAE,CAAC,8BAA8B,CAAC;aACjD;YACD;gBACE,EAAE,EAAE,gBAAgB;gBACpB,IAAI,EAAE,gBAAgB;gBACtB,WAAW,EAAE,sBAAsB;gBACnC,QAAQ,EAAE,CAAC,kBAAkB,EAAE,qBAAqB,CAAC;aACtD;YACD;gBACE,EAAE,EAAE,iBAAiB;gBACrB,IAAI,EAAE,iBAAiB;gBACvB,WAAW,EAAE,+BAA+B;gBAC5C,QAAQ,EAAE,CAAC,yBAAyB,EAAE,yBAAyB,CAAC;aACjE;YACD;gBACE,EAAE,EAAE,cAAc;gBAClB,IAAI,EAAE,cAAc;gBACpB,WAAW,EAAE,4BAA4B;gBACzC,QAAQ,EAAE,CAAC,gBAAgB,EAAE,YAAY,CAAC;gBAC1C,cAAc,EAAE,CAAC,0BAA0B,CAAC;aAC7C;YACD;gBACE,EAAE,EAAE,cAAc;gBAClB,IAAI,EAAE,cAAc;gBACpB,WAAW,EAAE,gCAAgC;gBAC7C,QAAQ,EAAE,EAAE;aACb;SACF,CAAC;IACJ,CAAC;IAED,eAAe,CAAC,QAAgB,EAAE,OAAe,EAAE,OAAiB;QAClE,MAAM,eAAe,GAAqB,EAAE,CAAC;QAC7C,MAAM,WAAW,GAAG,IAAI,CAAC,eAAe,CAAC,QAAQ,EAAE,OAAO,CAAC,CAAC;QAE5D,KAAK,MAAM,GAAG,IAAI,IAAI,CAAC,oBAAoB,EAAE,EAAE,CAAC;YAC9C,IAAI,GAAG,CAAC,EAAE,KAAK,cAAc;gBAAE,SAAS;YAExC,wBAAwB;YACxB,IAAI,GAAG,CAAC,cAAc,EAAE,CAAC;gBACvB,KAAK,MAAM,aAAa,IAAI,GAAG,CAAC,cAAc,EAAE,CAAC;oBAC/C,IAAI,OAAO,CAAC,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,aAAa,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,EAAE,CAAC;wBACjD,eAAe,CAAC,IAAI,CAAC;4BACnB,QAAQ,EAAE,GAAG,CAAC,EAAE;4BAChB,IAAI,EAAE,CAAC;4BACP,IAAI,EAAE,OAAO,CAAC,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,aAAa,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,IAAI,EAAE;4BACxD,UAAU,EAAE,GAAG;yBAChB,CAAC,CAAC;wBACH,MAAM;oBACR,CAAC;gBACH,CAAC;YACH,CAAC;YAED,yBAAyB;YACzB,KAAK,MAAM,OAAO,IAAI,GAAG,CAAC,QAAQ,EAAE,CAAC;gBACnC,MAAM,KAAK,GAAG,OAAO,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC;gBACpC,IAAI,KAAK,EAAE,CAAC;oBACV,MAAM,GAAG,GAAG,IAAI,CAAC,cAAc,CAAC,OAAO,EAAE,KAAK,CAAC,KAAK,CAAC,CAAC;oBACtD,eAAe,CAAC,IAAI,CAAC;wBACnB,QAAQ,EAAE,GAAG,CAAC,EAAE;wBAChB,IAAI,EAAE,GAAG,CAAC,IAAI;wBACd,IAAI,EAAE,GAAG,CAAC,IAAI;wBACd,UAAU,EAAE,GAAG;wBACf,OAAO,EAAE,GAAG,CAAC,OAAO;qBACrB,CAAC,CAAC;oBACH,MAAM;gBACR,CAAC;YACH,CAAC;QACH,CAAC;QAED,OAAO,EAAE,IAAI,EAAE,QAAQ,EAAE,eAAe,EAAE,WAAW,EAAE,CAAC;IAC1D,CAAC;CACF"}

package/dist/dna/gene-extractors/base-extractor.d.ts

@@ -0,0 +1,53 @@
+/**
+ * Base Gene Extractor
+ */
+import type { Gene, GeneId, AlleleId, AlleleExample } from '../types.js';
+export interface AlleleDefinition {
+    id: AlleleId;
+    name: string;
+    description: string;
+    patterns: RegExp[];
+    keywords?: string[];
+    importPatterns?: RegExp[];
+    priority?: number;
+}
+export interface DetectedAllele {
+    alleleId: AlleleId;
+    line: number;
+    code: string;
+    confidence: number;
+    context?: string;
+}
+export interface FileExtractionResult {
+    file: string;
+    detectedAlleles: DetectedAllele[];
+    isComponent: boolean;
+    errors?: string[];
+}
+export interface AggregatedExtractionResult {
+    geneId: GeneId;
+    totalFiles: number;
+    componentFiles: number;
+    alleleCounts: Map<AlleleId, number>;
+    alleleFiles: Map<AlleleId, Set<string>>;
+    alleleExamples: Map<AlleleId, AlleleExample[]>;
+    errors: string[];
+}
+export declare abstract class BaseGeneExtractor {
+    abstract readonly geneId: GeneId;
+    abstract readonly geneName: string;
+    abstract readonly geneDescription: string;
+    abstract getAlleleDefinitions(): AlleleDefinition[];
+    abstract extractFromFile(fp: string, c: string, i: string[]): FileExtractionResult;
+    analyze(files: Map<string, string>): Promise<Gene>;
+    isComponentFile(fp: string, c: string): boolean;
+    extractImports(c: string): string[];
+    protected aggregateResults(files: Map<string, string>): AggregatedExtractionResult;
+    protected buildGene(a: AggregatedExtractionResult): Gene;
+    protected extractContext(c: string, mi: number): {
+        line: number;
+        code: string;
+        context: string;
+    };
+}
+//# sourceMappingURL=base-extractor.d.ts.map

package/dist/dna/gene-extractors/base-extractor.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"base-extractor.d.ts","sourceRoot":"","sources":["../../../src/dna/gene-extractors/base-extractor.ts"],"names":[],"mappings":"AAAA;;GAEG;AACH,OAAO,KAAK,EAAE,IAAI,EAAE,MAAM,EAAU,QAAQ,EAAE,aAAa,EAAE,MAAM,aAAa,CAAC;AAEjF,MAAM,WAAW,gBAAgB;IAC/B,EAAE,EAAE,QAAQ,CAAC;IACb,IAAI,EAAE,MAAM,CAAC;IACb,WAAW,EAAE,MAAM,CAAC;IACpB,QAAQ,EAAE,MAAM,EAAE,CAAC;IACnB,QAAQ,CAAC,EAAE,MAAM,EAAE,CAAC;IACpB,cAAc,CAAC,EAAE,MAAM,EAAE,CAAC;IAC1B,QAAQ,CAAC,EAAE,MAAM,CAAC;CACnB;AAED,MAAM,WAAW,cAAc;IAC7B,QAAQ,EAAE,QAAQ,CAAC;IACnB,IAAI,EAAE,MAAM,CAAC;IACb,IAAI,EAAE,MAAM,CAAC;IACb,UAAU,EAAE,MAAM,CAAC;IACnB,OAAO,CAAC,EAAE,MAAM,CAAC;CAClB;AAED,MAAM,WAAW,oBAAoB;IACnC,IAAI,EAAE,MAAM,CAAC;IACb,eAAe,EAAE,cAAc,EAAE,CAAC;IAClC,WAAW,EAAE,OAAO,CAAC;IACrB,MAAM,CAAC,EAAE,MAAM,EAAE,CAAC;CACnB;AAED,MAAM,WAAW,0BAA0B;IACzC,MAAM,EAAE,MAAM,CAAC;IACf,UAAU,EAAE,MAAM,CAAC;IACnB,cAAc,EAAE,MAAM,CAAC;IACvB,YAAY,EAAE,GAAG,CAAC,QAAQ,EAAE,MAAM,CAAC,CAAC;IACpC,WAAW,EAAE,GAAG,CAAC,QAAQ,EAAE,GAAG,CAAC,MAAM,CAAC,CAAC,CAAC;IACxC,cAAc,EAAE,GAAG,CAAC,QAAQ,EAAE,aAAa,EAAE,CAAC,CAAC;IAC/C,MAAM,EAAE,MAAM,EAAE,CAAC;CAClB;AAED,8BAAsB,iBAAiB;IACrC,QAAQ,CAAC,QAAQ,CAAC,MAAM,EAAE,MAAM,CAAC;IACjC,QAAQ,CAAC,QAAQ,CAAC,QAAQ,EAAE,MAAM,CAAC;IACnC,QAAQ,CAAC,QAAQ,CAAC,eAAe,EAAE,MAAM,CAAC;IAC1C,QAAQ,CAAC,oBAAoB,IAAI,gBAAgB,EAAE;IACnD,QAAQ,CAAC,eAAe,CAAC,EAAE,EAAE,MAAM,EAAE,CAAC,EAAE,MAAM,EAAE,CAAC,EAAE,MAAM,EAAE,GAAG,oBAAoB;IAE5E,OAAO,CAAC,KAAK,EAAE,GAAG,CAAC,MAAM,EAAE,MAAM,CAAC,GAAG,OAAO,CAAC,IAAI,CAAC;IAIxD,eAAe,CAAC,EAAE,EAAE,MAAM,EAAE,CAAC,EAAE,MAAM,GAAG,OAAO;IAK/C,cAAc,CAAC,CAAC,EAAE,MAAM,GAAG,MAAM,EAAE;IAInC,SAAS,CAAC,gBAAgB,CAAC,KAAK,EAAE,GAAG,CAAC,MAAM,EAAE,MAAM,CAAC,GAAG,0BAA0B;IAyBlF,SAAS,CAAC,SAAS,CAAC,CAAC,EAAE,0BAA0B,GAAG,IAAI;IAmBxD,SAAS,CAAC,cAAc,CAAC,CAAC,EAAE,MAAM,EAAE,EAAE,EAAE,MAAM,GAAG;QAAE,IAAI,EAAE,MAAM,CAAC;QAAC,IAAI,EAAE,MAAM,CAAC;QAAC,OAAO,EAAE,MAAM,CAAA;KAAE;CAMjG"}

package/dist/dna/gene-extractors/base-extractor.js

@@ -0,0 +1,76 @@
+export class BaseGeneExtractor {
+    async analyze(files) {
+        return this.buildGene(this.aggregateResults(files));
+    }
+    isComponentFile(fp, c) {
+        if (!['.tsx', '.jsx', '.vue', '.svelte'].some(e => fp.endsWith(e)))
+            return false;
+        return [/export\s+(default\s+)?function\s+\w+/, /<template>/].some(p => p.test(c));
+    }
+    extractImports(c) {
+        return c.match(/^import\s+.+$/gm) ?? [];
+    }
+    aggregateResults(files) {
+        const r = {
+            geneId: this.geneId, totalFiles: 0, componentFiles: 0,
+            alleleCounts: new Map(), alleleFiles: new Map(), alleleExamples: new Map(), errors: []
+        };
+        for (const d of this.getAlleleDefinitions()) {
+            r.alleleCounts.set(d.id, 0);
+            r.alleleFiles.set(d.id, new Set());
+            r.alleleExamples.set(d.id, []);
+        }
+        for (const [fp, c] of files) {
+            r.totalFiles++;
+            const imp = this.extractImports(c);
+            const ex = this.extractFromFile(fp, c, imp);
+            if (ex.isComponent)
+                r.componentFiles++;
+            for (const det of ex.detectedAlleles) {
+                r.alleleCounts.set(det.alleleId, (r.alleleCounts.get(det.alleleId) ?? 0) + 1);
+                r.alleleFiles.get(det.alleleId)?.add(fp);
+                const exs = r.alleleExamples.get(det.alleleId);
+                if (exs && exs.length < 5)
+                    exs.push({ file: fp, line: det.line, code: det.code, context: det.context ?? '' });
+            }
+        }
+        return r;
+    }
+    buildGene(a) {
+        const alleles = [];
+        let tot = 0;
+        for (const c of a.alleleCounts.values())
+            tot += c;
+        for (const d of this.getAlleleDefinitions()) {
+            const cnt = a.alleleCounts.get(d.id) ?? 0;
+            const fs = a.alleleFiles.get(d.id) ?? new Set();
+            if (cnt > 0)
+                alleles.push({ id: d.id, name: d.name, description: d.description, frequency: tot > 0 ? cnt / tot : 0, fileCount: fs.size, pattern: d.patterns.map(p => p.source).join('|'), examples: a.alleleExamples.get(d.id) ?? [], isDominant: false });
+        }
+        alleles.sort((x, y) => y.frequency - x.frequency);
+        let dom = null;
+        const f = alleles[0];
+        if (f && f.frequency >= 0.3) {
+            dom = f;
+            f.isDominant = true;
+        }
+        const conf = f ? Math.round(f.frequency * 100) / 100 : 0;
+        const s = alleles[1];
+        const cons = alleles.length <= 1 ? 1 : Math.round(Math.min(1, 0.5 + ((f?.frequency ?? 0) - (s?.frequency ?? 0)) * 0.5) * 100) / 100;
+        return { id: this.geneId, name: this.geneName, description: this.geneDescription, dominant: dom, alleles, confidence: conf, consistency: cons, exemplars: dom ? Array.from(a.alleleFiles.get(dom.id) ?? []).slice(0, 5) : [] };
+    }
+    extractContext(c, mi) {
+        const ls = c.split('\n');
+        let idx = 0, ln = 1;
+        for (let i = 0; i < ls.length; i++) {
+            const l = ls[i];
+            if (l && idx + l.length >= mi) {
+                ln = i + 1;
+                break;
+            }
+            idx += (l?.length ?? 0) + 1;
+        }
+        return { line: ln, code: ls[ln - 1] ?? '', context: ls.slice(Math.max(0, ln - 3), Math.min(ls.length, ln + 2)).join('\n') };
+    }
+}
+//# sourceMappingURL=base-extractor.js.map

package/dist/dna/gene-extractors/base-extractor.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"base-extractor.js","sourceRoot":"","sources":["../../../src/dna/gene-extractors/base-extractor.ts"],"names":[],"mappings":"AAwCA,MAAM,OAAgB,iBAAiB;IAOrC,KAAK,CAAC,OAAO,CAAC,KAA0B;QACtC,OAAO,IAAI,CAAC,SAAS,CAAC,IAAI,CAAC,gBAAgB,CAAC,KAAK,CAAC,CAAC,CAAC;IACtD,CAAC;IAED,eAAe,CAAC,EAAU,EAAE,CAAS;QACnC,IAAI,CAAC,CAAC,MAAM,EAAE,MAAM,EAAE,MAAM,EAAE,SAAS,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC;YAAE,OAAO,KAAK,CAAC;QACjF,OAAO,CAAC,sCAAsC,EAAE,YAAY,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC;IACrF,CAAC;IAED,cAAc,CAAC,CAAS;QACtB,OAAO,CAAC,CAAC,KAAK,CAAC,iBAAiB,CAAC,IAAI,EAAE,CAAC;IAC1C,CAAC;IAES,gBAAgB,CAAC,KAA0B;QACnD,MAAM,CAAC,GAA+B;YACpC,MAAM,EAAE,IAAI,CAAC,MAAM,EAAE,UAAU,EAAE,CAAC,EAAE,cAAc,EAAE,CAAC;YACrD,YAAY,EAAE,IAAI,GAAG,EAAE,EAAE,WAAW,EAAE,IAAI,GAAG,EAAE,EAAE,cAAc,EAAE,IAAI,GAAG,EAAE,EAAE,MAAM,EAAE,EAAE;SACvF,CAAC;QACF,KAAK,MAAM,CAAC,IAAI,IAAI,CAAC,oBAAoB,EAAE,EAAE,CAAC;YAC5C,CAAC,CAAC,YAAY,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC;YAC5B,CAAC,CAAC,WAAW,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,IAAI,GAAG,EAAE,CAAC,CAAC;YACnC,CAAC,CAAC,cAAc,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,EAAE,CAAC,CAAC;QACjC,CAAC;QACD,KAAK,MAAM,CAAC,EAAE,EAAE,CAAC,CAAC,IAAI,KAAK,EAAE,CAAC;YAC5B,CAAC,CAAC,UAAU,EAAE,CAAC;YACf,MAAM,GAAG,GAAG,IAAI,CAAC,cAAc,CAAC,CAAC,CAAC,CAAC;YACnC,MAAM,EAAE,GAAG,IAAI,CAAC,eAAe,CAAC,EAAE,EAAE,CAAC,EAAE,GAAG,CAAC,CAAC;YAC5C,IAAI,EAAE,CAAC,WAAW;gBAAE,CAAC,CAAC,cAAc,EAAE,CAAC;YACvC,KAAK,MAAM,GAAG,IAAI,EAAE,CAAC,eAAe,EAAE,CAAC;gBACrC,CAAC,CAAC,YAAY,CAAC,GAAG,CAAC,GAAG,CAAC,QAAQ,EAAE,CAAC,CAAC,CAAC,YAAY,CAAC,GAAG,CAAC,GAAG,CAAC,QAAQ,CAAC,IAAI,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC;gBAC9E,CAAC,CAAC,WAAW,CAAC,GAAG,CAAC,GAAG,CAAC,QAAQ,CAAC,EAAE,GAAG,CAAC,EAAE,CAAC,CAAC;gBACzC,MAAM,GAAG,GAAG,CAAC,CAAC,cAAc,CAAC,GAAG,CAAC,GAAG,CAAC,QAAQ,CAAC,CAAC;gBAC/C,IAAI,GAAG,IAAI,GAAG,CAAC,MAAM,GAAG,CAAC;oBAAE,GAAG,CAAC,IAAI,CAAC,EAAE,IAAI,EAAE,EAAE,EAAE,IAAI,EAAE,GAAG,CAAC,IAAI,EAAE,IAAI,EAAE,GAAG,CAAC,IAAI,EAAE,OAAO,EAAE,GAAG,CAAC,OAAO,IAAI,EAAE,EAAE,CAAC,CAAC;YAChH,CAAC;QACH,CAAC;QACD,OAAO,CAAC,CAAC;IACX,CAAC;IAES,SAAS,CAAC,CAA6B;QAC/C,MAAM,OAAO,GAAa,EAAE,CAAC;QAC7B,IAAI,GAAG,GAAG,CAAC,CAAC;QACZ,KAAK,MAAM,CAAC,IAAI,CAAC,CAAC,YAAY,CAAC,MAAM,EAAE;YAAE,GAAG,IAAI,CAAC,CAAC;QAClD,KAAK,MAAM,CAAC,IAAI,IAAI,CAAC,oBAAoB,EAAE,EAAE,CAAC;YAC5C,MAAM,GAAG,GAAG,CAAC,CAAC,YAAY,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,IAAI,CAAC,CAAC;YAC1C,MAAM,EAAE,GAAG,CAAC,CAAC,WAAW,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,IAAI,IAAI,GAAG,EAAE,CAAC;YAChD,IAAI,GAAG,GAAG,CAAC;gBAAE,OAAO,CAAC,IAAI,CAAC,EAAE,EAAE,EAAE,CAAC,CAAC,EAAE,EAAE,IAAI,EAAE,CAAC,CAAC,IAAI,EAAE,WAAW,EAAE,CAAC,CAAC,WAAW,EAAE,SAAS,EAAE,GAAG,GAAG,CAAC,CAAC,CAAC,CAAC,GAAG,GAAG,GAAG,CAAC,CAAC,CAAC,CAAC,EAAE,SAAS,EAAE,EAAE,CAAC,IAAI,EAAE,OAAO,EAAE,CAAC,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,MAAM,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC,EAAE,QAAQ,EAAE,CAAC,CAAC,cAAc,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,IAAI,EAAE,EAAE,UAAU,EAAE,KAAK,EAAE,CAAC,CAAC;QAC7P,CAAC;QACD,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,SAAS,GAAG,CAAC,CAAC,SAAS,CAAC,CAAC;QAClD,IAAI,GAAG,GAAkB,IAAI,CAAC;QAC9B,MAAM,CAAC,GAAG,OAAO,CAAC,CAAC,CAAC,CAAC;QACrB,IAAI,CAAC,IAAI,CAAC,CAAC,SAAS,IAAI,GAAG,EAAE,CAAC;YAAC,GAAG,GAAG,CAAC,CAAC;YAAC,CAAC,CAAC,UAAU,GAAG,IAAI,CAAC;QAAC,CAAC;QAC9D,MAAM,IAAI,GAAG,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,SAAS,GAAG,GAAG,CAAC,GAAG,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC;QACzD,MAAM,CAAC,GAAG,OAAO,CAAC,CAAC,CAAC,CAAC;QACrB,MAAM,IAAI,GAAG,OAAO,CAAC,MAAM,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,EAAE,GAAG,GAAG,CAAC,CAAC,CAAC,EAAE,SAAS,IAAI,CAAC,CAAC,GAAG,CAAC,CAAC,EAAE,SAAS,IAAI,CAAC,CAAC,CAAC,GAAG,GAAG,CAAC,GAAG,GAAG,CAAC,GAAG,GAAG,CAAC;QACpI,OAAO,EAAE,EAAE,EAAE,IAAI,CAAC,MAAM,EAAE,IAAI,EAAE,IAAI,CAAC,QAAQ,EAAE,WAAW,EAAE,IAAI,CAAC,eAAe,EAAE,QAAQ,EAAE,GAAG,EAAE,OAAO,EAAE,UAAU,EAAE,IAAI,EAAE,WAAW,EAAE,IAAI,EAAE,SAAS,EAAE,GAAG,CAAC,CAAC,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC,CAAC,WAAW,CAAC,GAAG,CAAC,GAAG,CAAC,EAAE,CAAC,IAAI,EAAE,CAAC,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC;IACjO,CAAC;IAES,cAAc,CAAC,CAAS,EAAE,EAAU;QAC5C,MAAM,EAAE,GAAG,CAAC,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC;QACzB,IAAI,GAAG,GAAG,CAAC,EAAE,EAAE,GAAG,CAAC,CAAC;QACpB,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,EAAE,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE,CAAC;YAAC,MAAM,CAAC,GAAG,EAAE,CAAC,CAAC,CAAC,CAAC;YAAC,IAAI,CAAC,IAAI,GAAG,GAAG,CAAC,CAAC,MAAM,IAAI,EAAE,EAAE,CAAC;gBAAC,EAAE,GAAG,CAAC,GAAG,CAAC,CAAC;gBAAC,MAAM;YAAC,CAAC;YAAC,GAAG,IAAI,CAAC,CAAC,EAAE,MAAM,IAAI,CAAC,CAAC,GAAG,CAAC,CAAC;QAAC,CAAC;QAC3I,OAAO,EAAE,IAAI,EAAE,EAAE,EAAE,IAAI,EAAE,EAAE,CAAC,EAAE,GAAG,CAAC,CAAC,IAAI,EAAE,EAAE,OAAO,EAAE,EAAE,CAAC,KAAK,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,EAAE,EAAE,GAAG,CAAC,CAAC,EAAE,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,MAAM,EAAE,EAAE,GAAG,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,IAAI,CAAC,EAAE,CAAC;IAC9H,CAAC;CACF"}

package/dist/dna/gene-extractors/index.d.ts

@@ -0,0 +1,16 @@
+/**
+ * Gene Extractors Index
+ */
+export { BaseGeneExtractor } from './base-extractor.js';
+export type { AlleleDefinition, FileExtractionResult, DetectedAllele, AggregatedExtractionResult } from './base-extractor.js';
+export { VariantHandlingExtractor } from './variant-handling.js';
+export { ResponsiveApproachExtractor } from './responsive-approach.js';
+export { StateStylingExtractor } from './state-styling.js';
+export { ThemingExtractor } from './theming.js';
+export { SpacingPhilosophyExtractor } from './spacing-philosophy.js';
+export { AnimationApproachExtractor } from './animation-approach.js';
+import type { BaseGeneExtractor } from './base-extractor.js';
+import type { GeneId } from '../types.js';
+export declare function createAllGeneExtractors(): Map<GeneId, BaseGeneExtractor>;
+export declare function createGeneExtractor(geneId: GeneId): BaseGeneExtractor | null;
+//# sourceMappingURL=index.d.ts.map

package/dist/dna/gene-extractors/index.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../../src/dna/gene-extractors/index.ts"],"names":[],"mappings":"AAAA;;GAEG;AAEH,OAAO,EAAE,iBAAiB,EAAE,MAAM,qBAAqB,CAAC;AACxD,YAAY,EAAE,gBAAgB,EAAE,oBAAoB,EAAE,cAAc,EAAE,0BAA0B,EAAE,MAAM,qBAAqB,CAAC;AAE9H,OAAO,EAAE,wBAAwB,EAAE,MAAM,uBAAuB,CAAC;AACjE,OAAO,EAAE,2BAA2B,EAAE,MAAM,0BAA0B,CAAC;AACvE,OAAO,EAAE,qBAAqB,EAAE,MAAM,oBAAoB,CAAC;AAC3D,OAAO,EAAE,gBAAgB,EAAE,MAAM,cAAc,CAAC;AAChD,OAAO,EAAE,0BAA0B,EAAE,MAAM,yBAAyB,CAAC;AACrE,OAAO,EAAE,0BAA0B,EAAE,MAAM,yBAAyB,CAAC;AAQrE,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,qBAAqB,CAAC;AAC7D,OAAO,KAAK,EAAE,MAAM,EAAE,MAAM,aAAa,CAAC;AAE1C,wBAAgB,uBAAuB,IAAI,GAAG,CAAC,MAAM,EAAE,iBAAiB,CAAC,CASxE;AAED,wBAAgB,mBAAmB,CAAC,MAAM,EAAE,MAAM,GAAG,iBAAiB,GAAG,IAAI,CAU5E"}

package/dist/dna/gene-extractors/index.js

@@ -0,0 +1,38 @@
+/**
+ * Gene Extractors Index
+ */
+export { BaseGeneExtractor } from './base-extractor.js';
+export { VariantHandlingExtractor } from './variant-handling.js';
+export { ResponsiveApproachExtractor } from './responsive-approach.js';
+export { StateStylingExtractor } from './state-styling.js';
+export { ThemingExtractor } from './theming.js';
+export { SpacingPhilosophyExtractor } from './spacing-philosophy.js';
+export { AnimationApproachExtractor } from './animation-approach.js';
+import { VariantHandlingExtractor } from './variant-handling.js';
+import { ResponsiveApproachExtractor } from './responsive-approach.js';
+import { StateStylingExtractor } from './state-styling.js';
+import { ThemingExtractor } from './theming.js';
+import { SpacingPhilosophyExtractor } from './spacing-philosophy.js';
+import { AnimationApproachExtractor } from './animation-approach.js';
+export function createAllGeneExtractors() {
+    const extractors = new Map();
+    extractors.set('variant-handling', new VariantHandlingExtractor());
+    extractors.set('responsive-approach', new ResponsiveApproachExtractor());
+    extractors.set('state-styling', new StateStylingExtractor());
+    extractors.set('theming', new ThemingExtractor());
+    extractors.set('spacing-philosophy', new SpacingPhilosophyExtractor());
+    extractors.set('animation-approach', new AnimationApproachExtractor());
+    return extractors;
+}
+export function createGeneExtractor(geneId) {
+    switch (geneId) {
+        case 'variant-handling': return new VariantHandlingExtractor();
+        case 'responsive-approach': return new ResponsiveApproachExtractor();
+        case 'state-styling': return new StateStylingExtractor();
+        case 'theming': return new ThemingExtractor();
+        case 'spacing-philosophy': return new SpacingPhilosophyExtractor();
+        case 'animation-approach': return new AnimationApproachExtractor();
+        default: return null;
+    }
+}
+//# sourceMappingURL=index.js.map

package/dist/dna/gene-extractors/index.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../../src/dna/gene-extractors/index.ts"],"names":[],"mappings":"AAAA;;GAEG;AAEH,OAAO,EAAE,iBAAiB,EAAE,MAAM,qBAAqB,CAAC;AAGxD,OAAO,EAAE,wBAAwB,EAAE,MAAM,uBAAuB,CAAC;AACjE,OAAO,EAAE,2BAA2B,EAAE,MAAM,0BAA0B,CAAC;AACvE,OAAO,EAAE,qBAAqB,EAAE,MAAM,oBAAoB,CAAC;AAC3D,OAAO,EAAE,gBAAgB,EAAE,MAAM,cAAc,CAAC;AAChD,OAAO,EAAE,0BAA0B,EAAE,MAAM,yBAAyB,CAAC;AACrE,OAAO,EAAE,0BAA0B,EAAE,MAAM,yBAAyB,CAAC;AAErE,OAAO,EAAE,wBAAwB,EAAE,MAAM,uBAAuB,CAAC;AACjE,OAAO,EAAE,2BAA2B,EAAE,MAAM,0BAA0B,CAAC;AACvE,OAAO,EAAE,qBAAqB,EAAE,MAAM,oBAAoB,CAAC;AAC3D,OAAO,EAAE,gBAAgB,EAAE,MAAM,cAAc,CAAC;AAChD,OAAO,EAAE,0BAA0B,EAAE,MAAM,yBAAyB,CAAC;AACrE,OAAO,EAAE,0BAA0B,EAAE,MAAM,yBAAyB,CAAC;AAIrE,MAAM,UAAU,uBAAuB;IACrC,MAAM,UAAU,GAAG,IAAI,GAAG,EAA6B,CAAC;IACxD,UAAU,CAAC,GAAG,CAAC,kBAAkB,EAAE,IAAI,wBAAwB,EAAE,CAAC,CAAC;IACnE,UAAU,CAAC,GAAG,CAAC,qBAAqB,EAAE,IAAI,2BAA2B,EAAE,CAAC,CAAC;IACzE,UAAU,CAAC,GAAG,CAAC,eAAe,EAAE,IAAI,qBAAqB,EAAE,CAAC,CAAC;IAC7D,UAAU,CAAC,GAAG,CAAC,SAAS,EAAE,IAAI,gBAAgB,EAAE,CAAC,CAAC;IAClD,UAAU,CAAC,GAAG,CAAC,oBAAoB,EAAE,IAAI,0BAA0B,EAAE,CAAC,CAAC;IACvE,UAAU,CAAC,GAAG,CAAC,oBAAoB,EAAE,IAAI,0BAA0B,EAAE,CAAC,CAAC;IACvE,OAAO,UAAU,CAAC;AACpB,CAAC;AAED,MAAM,UAAU,mBAAmB,CAAC,MAAc;IAChD,QAAQ,MAAM,EAAE,CAAC;QACf,KAAK,kBAAkB,CAAC,CAAC,OAAO,IAAI,wBAAwB,EAAE,CAAC;QAC/D,KAAK,qBAAqB,CAAC,CAAC,OAAO,IAAI,2BAA2B,EAAE,CAAC;QACrE,KAAK,eAAe,CAAC,CAAC,OAAO,IAAI,qBAAqB,EAAE,CAAC;QACzD,KAAK,SAAS,CAAC,CAAC,OAAO,IAAI,gBAAgB,EAAE,CAAC;QAC9C,KAAK,oBAAoB,CAAC,CAAC,OAAO,IAAI,0BAA0B,EAAE,CAAC;QACnE,KAAK,oBAAoB,CAAC,CAAC,OAAO,IAAI,0BAA0B,EAAE,CAAC;QACnE,OAAO,CAAC,CAAC,OAAO,IAAI,CAAC;IACvB,CAAC;AACH,CAAC"}

package/dist/dna/gene-extractors/responsive-approach.d.ts

@@ -0,0 +1,10 @@
+import { BaseGeneExtractor, type AlleleDefinition, type FileExtractionResult } from './base-extractor.js';
+import type { GeneId } from '../types.js';
+export declare class ResponsiveApproachExtractor extends BaseGeneExtractor {
+    readonly geneId: GeneId;
+    readonly geneName = "Responsive Approach";
+    readonly geneDescription = "How responsive design is handled";
+    getAlleleDefinitions(): AlleleDefinition[];
+    extractFromFile(fp: string, c: string, _imp: string[]): FileExtractionResult;
+}
+//# sourceMappingURL=responsive-approach.d.ts.map

package/dist/dna/gene-extractors/responsive-approach.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"responsive-approach.d.ts","sourceRoot":"","sources":["../../../src/dna/gene-extractors/responsive-approach.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,iBAAiB,EAAE,KAAK,gBAAgB,EAAE,KAAK,oBAAoB,EAAuB,MAAM,qBAAqB,CAAC;AAC/H,OAAO,KAAK,EAAE,MAAM,EAAE,MAAM,aAAa,CAAC;AAE1C,qBAAa,2BAA4B,SAAQ,iBAAiB;IAChE,QAAQ,CAAC,MAAM,EAAE,MAAM,CAAyB;IAChD,QAAQ,CAAC,QAAQ,yBAAyB;IAC1C,QAAQ,CAAC,eAAe,sCAAsC;IAE9D,oBAAoB,IAAI,gBAAgB,EAAE;IAU1C,eAAe,CAAC,EAAE,EAAE,MAAM,EAAE,CAAC,EAAE,MAAM,EAAE,IAAI,EAAE,MAAM,EAAE,GAAG,oBAAoB;CAO7E"}

package/dist/dna/gene-extractors/responsive-approach.js

@@ -0,0 +1,30 @@
+import { BaseGeneExtractor } from './base-extractor.js';
+export class ResponsiveApproachExtractor extends BaseGeneExtractor {
+    geneId = 'responsive-approach';
+    geneName = 'Responsive Approach';
+    geneDescription = 'How responsive design is handled';
+    getAlleleDefinitions() {
+        return [
+            { id: 'tailwind-mobile-first', name: 'Tailwind Mobile-First', description: 'sm:, md:, lg: breakpoints', patterns: [/className\s*=\s*["'`][^"'`]*\b(sm|md|lg|xl):/] },
+            { id: 'tailwind-desktop-first', name: 'Tailwind Desktop-First', description: 'max-* variants', patterns: [/className\s*=\s*["'`][^"'`]*\bmax-(sm|md|lg):/] },
+            { id: 'css-media-queries', name: 'CSS Media Queries', description: '@media queries', patterns: [/@media\s*\([^)]*width/] },
+            { id: 'container-queries', name: 'Container Queries', description: '@container', patterns: [/@container/] },
+            { id: 'js-responsive', name: 'JS Responsive', description: 'useMediaQuery hooks', patterns: [/useMediaQuery\s*\(/, /useBreakpoint\s*\(/] },
+        ];
+    }
+    extractFromFile(fp, c, _imp) {
+        const det = [];
+        for (const d of this.getAlleleDefinitions()) {
+            for (const p of d.patterns) {
+                const m = p.exec(c);
+                if (m) {
+                    const ctx = this.extractContext(c, m.index);
+                    det.push({ alleleId: d.id, line: ctx.line, code: ctx.code, confidence: 0.8, context: ctx.context });
+                    break;
+                }
+            }
+        }
+        return { file: fp, detectedAlleles: det, isComponent: this.isComponentFile(fp, c) };
+    }
+}
+//# sourceMappingURL=responsive-approach.js.map

package/dist/dna/gene-extractors/responsive-approach.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"responsive-approach.js","sourceRoot":"","sources":["../../../src/dna/gene-extractors/responsive-approach.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,iBAAiB,EAAyE,MAAM,qBAAqB,CAAC;AAG/H,MAAM,OAAO,2BAA4B,SAAQ,iBAAiB;IACvD,MAAM,GAAW,qBAAqB,CAAC;IACvC,QAAQ,GAAG,qBAAqB,CAAC;IACjC,eAAe,GAAG,kCAAkC,CAAC;IAE9D,oBAAoB;QAClB,OAAO;YACL,EAAE,EAAE,EAAE,uBAAuB,EAAE,IAAI,EAAE,uBAAuB,EAAE,WAAW,EAAE,2BAA2B,EAAE,QAAQ,EAAE,CAAC,8CAA8C,CAAC,EAAE;YACpK,EAAE,EAAE,EAAE,wBAAwB,EAAE,IAAI,EAAE,wBAAwB,EAAE,WAAW,EAAE,gBAAgB,EAAE,QAAQ,EAAE,CAAC,+CAA+C,CAAC,EAAE;YAC5J,EAAE,EAAE,EAAE,mBAAmB,EAAE,IAAI,EAAE,mBAAmB,EAAE,WAAW,EAAE,gBAAgB,EAAE,QAAQ,EAAE,CAAC,uBAAuB,CAAC,EAAE;YAC1H,EAAE,EAAE,EAAE,mBAAmB,EAAE,IAAI,EAAE,mBAAmB,EAAE,WAAW,EAAE,YAAY,EAAE,QAAQ,EAAE,CAAC,YAAY,CAAC,EAAE;YAC3G,EAAE,EAAE,EAAE,eAAe,EAAE,IAAI,EAAE,eAAe,EAAE,WAAW,EAAE,qBAAqB,EAAE,QAAQ,EAAE,CAAC,oBAAoB,EAAE,oBAAoB,CAAC,EAAE;SAC3I,CAAC;IACJ,CAAC;IAED,eAAe,CAAC,EAAU,EAAE,CAAS,EAAE,IAAc;QACnD,MAAM,GAAG,GAAqB,EAAE,CAAC;QACjC,KAAK,MAAM,CAAC,IAAI,IAAI,CAAC,oBAAoB,EAAE,EAAE,CAAC;YAC5C,KAAK,MAAM,CAAC,IAAI,CAAC,CAAC,QAAQ,EAAE,CAAC;gBAAC,MAAM,CAAC,GAAG,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;gBAAC,IAAI,CAAC,EAAE,CAAC;oBAAC,MAAM,GAAG,GAAG,IAAI,CAAC,cAAc,CAAC,CAAC,EAAE,CAAC,CAAC,KAAK,CAAC,CAAC;oBAAC,GAAG,CAAC,IAAI,CAAC,EAAE,QAAQ,EAAE,CAAC,CAAC,EAAE,EAAE,IAAI,EAAE,GAAG,CAAC,IAAI,EAAE,IAAI,EAAE,GAAG,CAAC,IAAI,EAAE,UAAU,EAAE,GAAG,EAAE,OAAO,EAAE,GAAG,CAAC,OAAO,EAAE,CAAC,CAAC;oBAAC,MAAM;gBAAC,CAAC;YAAC,CAAC;QAC1N,CAAC;QACD,OAAO,EAAE,IAAI,EAAE,EAAE,EAAE,eAAe,EAAE,GAAG,EAAE,WAAW,EAAE,IAAI,CAAC,eAAe,CAAC,EAAE,EAAE,CAAC,CAAC,EAAE,CAAC;IACtF,CAAC;CACF"}

package/dist/dna/gene-extractors/spacing-philosophy.d.ts

@@ -0,0 +1,10 @@
+import { BaseGeneExtractor, type AlleleDefinition, type FileExtractionResult } from './base-extractor.js';
+import type { GeneId } from '../types.js';
+export declare class SpacingPhilosophyExtractor extends BaseGeneExtractor {
+    readonly geneId: GeneId;
+    readonly geneName = "Spacing Philosophy";
+    readonly geneDescription = "How spacing is managed";
+    getAlleleDefinitions(): AlleleDefinition[];
+    extractFromFile(fp: string, c: string, _imp: string[]): FileExtractionResult;
+}
+//# sourceMappingURL=spacing-philosophy.d.ts.map

package/dist/dna/gene-extractors/spacing-philosophy.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"spacing-philosophy.d.ts","sourceRoot":"","sources":["../../../src/dna/gene-extractors/spacing-philosophy.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,iBAAiB,EAAE,KAAK,gBAAgB,EAAE,KAAK,oBAAoB,EAAuB,MAAM,qBAAqB,CAAC;AAC/H,OAAO,KAAK,EAAE,MAAM,EAAE,MAAM,aAAa,CAAC;AAE1C,qBAAa,0BAA2B,SAAQ,iBAAiB;IAC/D,QAAQ,CAAC,MAAM,EAAE,MAAM,CAAwB;IAC/C,QAAQ,CAAC,QAAQ,wBAAwB;IACzC,QAAQ,CAAC,eAAe,4BAA4B;IAEpD,oBAAoB,IAAI,gBAAgB,EAAE;IAU1C,eAAe,CAAC,EAAE,EAAE,MAAM,EAAE,CAAC,EAAE,MAAM,EAAE,IAAI,EAAE,MAAM,EAAE,GAAG,oBAAoB;CAO7E"}

package/dist/dna/gene-extractors/spacing-philosophy.js

@@ -0,0 +1,30 @@
+import { BaseGeneExtractor } from './base-extractor.js';
+export class SpacingPhilosophyExtractor extends BaseGeneExtractor {
+    geneId = 'spacing-philosophy';
+    geneName = 'Spacing Philosophy';
+    geneDescription = 'How spacing is managed';
+    getAlleleDefinitions() {
+        return [
+            { id: 'tailwind-scale', name: 'Tailwind Scale', description: 'p-4, m-2, gap-6', patterns: [/className\s*=\s*["'`][^"'`]*\b[pm][trblxy]?-\d+/, /className\s*=\s*["'`][^"'`]*\bgap-\d+/] },
+            { id: 'tailwind-arbitrary', name: 'Tailwind Arbitrary', description: 'p-[13px]', patterns: [/className\s*=\s*["'`][^"'`]*\b[pm][trblxy]?-\[\d+/] },
+            { id: 'design-tokens', name: 'Design Tokens', description: 'var(--spacing-*)', patterns: [/var\s*\(\s*--spacing/] },
+            { id: 'hardcoded', name: 'Hardcoded', description: 'padding: 16px', patterns: [/padding\s*:\s*\d+px/, /margin\s*:\s*\d+px/] },
+            { id: 'spacing-components', name: 'Spacing Components', description: 'Stack, Box', patterns: [/<Stack\s+spacing/, /<Box\s+[pm]=/] },
+        ];
+    }
+    extractFromFile(fp, c, _imp) {
+        const det = [];
+        for (const d of this.getAlleleDefinitions()) {
+            for (const p of d.patterns) {
+                const m = p.exec(c);
+                if (m) {
+                    const ctx = this.extractContext(c, m.index);
+                    det.push({ alleleId: d.id, line: ctx.line, code: ctx.code, confidence: 0.8, context: ctx.context });
+                    break;
+                }
+            }
+        }
+        return { file: fp, detectedAlleles: det, isComponent: this.isComponentFile(fp, c) };
+    }
+}
+//# sourceMappingURL=spacing-philosophy.js.map

package/dist/dna/gene-extractors/spacing-philosophy.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"spacing-philosophy.js","sourceRoot":"","sources":["../../../src/dna/gene-extractors/spacing-philosophy.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,iBAAiB,EAAyE,MAAM,qBAAqB,CAAC;AAG/H,MAAM,OAAO,0BAA2B,SAAQ,iBAAiB;IACtD,MAAM,GAAW,oBAAoB,CAAC;IACtC,QAAQ,GAAG,oBAAoB,CAAC;IAChC,eAAe,GAAG,wBAAwB,CAAC;IAEpD,oBAAoB;QAClB,OAAO;YACL,EAAE,EAAE,EAAE,gBAAgB,EAAE,IAAI,EAAE,gBAAgB,EAAE,WAAW,EAAE,iBAAiB,EAAE,QAAQ,EAAE,CAAC,iDAAiD,EAAE,uCAAuC,CAAC,EAAE;YACxL,EAAE,EAAE,EAAE,oBAAoB,EAAE,IAAI,EAAE,oBAAoB,EAAE,WAAW,EAAE,UAAU,EAAE,QAAQ,EAAE,CAAC,mDAAmD,CAAC,EAAE;YAClJ,EAAE,EAAE,EAAE,eAAe,EAAE,IAAI,EAAE,eAAe,EAAE,WAAW,EAAE,kBAAkB,EAAE,QAAQ,EAAE,CAAC,sBAAsB,CAAC,EAAE;YACnH,EAAE,EAAE,EAAE,WAAW,EAAE,IAAI,EAAE,WAAW,EAAE,WAAW,EAAE,eAAe,EAAE,QAAQ,EAAE,CAAC,qBAAqB,EAAE,oBAAoB,CAAC,EAAE;YAC7H,EAAE,EAAE,EAAE,oBAAoB,EAAE,IAAI,EAAE,oBAAoB,EAAE,WAAW,EAAE,YAAY,EAAE,QAAQ,EAAE,CAAC,kBAAkB,EAAE,cAAc,CAAC,EAAE;SACpI,CAAC;IACJ,CAAC;IAED,eAAe,CAAC,EAAU,EAAE,CAAS,EAAE,IAAc;QACnD,MAAM,GAAG,GAAqB,EAAE,CAAC;QACjC,KAAK,MAAM,CAAC,IAAI,IAAI,CAAC,oBAAoB,EAAE,EAAE,CAAC;YAC5C,KAAK,MAAM,CAAC,IAAI,CAAC,CAAC,QAAQ,EAAE,CAAC;gBAAC,MAAM,CAAC,GAAG,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;gBAAC,IAAI,CAAC,EAAE,CAAC;oBAAC,MAAM,GAAG,GAAG,IAAI,CAAC,cAAc,CAAC,CAAC,EAAE,CAAC,CAAC,KAAK,CAAC,CAAC;oBAAC,GAAG,CAAC,IAAI,CAAC,EAAE,QAAQ,EAAE,CAAC,CAAC,EAAE,EAAE,IAAI,EAAE,GAAG,CAAC,IAAI,EAAE,IAAI,EAAE,GAAG,CAAC,IAAI,EAAE,UAAU,EAAE,GAAG,EAAE,OAAO,EAAE,GAAG,CAAC,OAAO,EAAE,CAAC,CAAC;oBAAC,MAAM;gBAAC,CAAC;YAAC,CAAC;QAC1N,CAAC;QACD,OAAO,EAAE,IAAI,EAAE,EAAE,EAAE,eAAe,EAAE,GAAG,EAAE,WAAW,EAAE,IAAI,CAAC,eAAe,CAAC,EAAE,EAAE,CAAC,CAAC,EAAE,CAAC;IACtF,CAAC;CACF"}

package/dist/dna/gene-extractors/state-styling.d.ts

@@ -0,0 +1,10 @@
+import { BaseGeneExtractor, type AlleleDefinition, type FileExtractionResult } from './base-extractor.js';
+import type { GeneId } from '../types.js';
+export declare class StateStylingExtractor extends BaseGeneExtractor {
+    readonly geneId: GeneId;
+    readonly geneName = "State Styling";
+    readonly geneDescription = "How interactive states are styled";
+    getAlleleDefinitions(): AlleleDefinition[];
+    extractFromFile(fp: string, c: string, _imp: string[]): FileExtractionResult;
+}
+//# sourceMappingURL=state-styling.d.ts.map

package/dist/dna/gene-extractors/state-styling.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"state-styling.d.ts","sourceRoot":"","sources":["../../../src/dna/gene-extractors/state-styling.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,iBAAiB,EAAE,KAAK,gBAAgB,EAAE,KAAK,oBAAoB,EAAuB,MAAM,qBAAqB,CAAC;AAC/H,OAAO,KAAK,EAAE,MAAM,EAAE,MAAM,aAAa,CAAC;AAE1C,qBAAa,qBAAsB,SAAQ,iBAAiB;IAC1D,QAAQ,CAAC,MAAM,EAAE,MAAM,CAAmB;IAC1C,QAAQ,CAAC,QAAQ,mBAAmB;IACpC,QAAQ,CAAC,eAAe,uCAAuC;IAE/D,oBAAoB,IAAI,gBAAgB,EAAE;IAS1C,eAAe,CAAC,EAAE,EAAE,MAAM,EAAE,CAAC,EAAE,MAAM,EAAE,IAAI,EAAE,MAAM,EAAE,GAAG,oBAAoB;CAO7E"}

package/dist/dna/gene-extractors/state-styling.js

@@ -0,0 +1,29 @@
+import { BaseGeneExtractor } from './base-extractor.js';
+export class StateStylingExtractor extends BaseGeneExtractor {
+    geneId = 'state-styling';
+    geneName = 'State Styling';
+    geneDescription = 'How interactive states are styled';
+    getAlleleDefinitions() {
+        return [
+            { id: 'tailwind-variants', name: 'Tailwind State Variants', description: 'hover:, focus:, disabled:', patterns: [/className\s*=\s*["'`][^"'`]*\bhover:/, /className\s*=\s*["'`][^"'`]*\bfocus:/] },
+            { id: 'css-pseudo', name: 'CSS Pseudo Classes', description: ':hover, :focus', patterns: [/:hover\s*\{/, /:focus\s*\{/] },
+            { id: 'state-props', name: 'State Props', description: 'isHovered, isFocused', patterns: [/isHovered\s*[?&|]/, /isFocused\s*[?&|]/] },
+            { id: 'data-state', name: 'Data State', description: 'data-state attributes', patterns: [/data-state\s*=/] },
+        ];
+    }
+    extractFromFile(fp, c, _imp) {
+        const det = [];
+        for (const d of this.getAlleleDefinitions()) {
+            for (const p of d.patterns) {
+                const m = p.exec(c);
+                if (m) {
+                    const ctx = this.extractContext(c, m.index);
+                    det.push({ alleleId: d.id, line: ctx.line, code: ctx.code, confidence: 0.8, context: ctx.context });
+                    break;
+                }
+            }
+        }
+        return { file: fp, detectedAlleles: det, isComponent: this.isComponentFile(fp, c) };
+    }
+}
+//# sourceMappingURL=state-styling.js.map

package/dist/dna/gene-extractors/state-styling.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"state-styling.js","sourceRoot":"","sources":["../../../src/dna/gene-extractors/state-styling.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,iBAAiB,EAAyE,MAAM,qBAAqB,CAAC;AAG/H,MAAM,OAAO,qBAAsB,SAAQ,iBAAiB;IACjD,MAAM,GAAW,eAAe,CAAC;IACjC,QAAQ,GAAG,eAAe,CAAC;IAC3B,eAAe,GAAG,mCAAmC,CAAC;IAE/D,oBAAoB;QAClB,OAAO;YACL,EAAE,EAAE,EAAE,mBAAmB,EAAE,IAAI,EAAE,yBAAyB,EAAE,WAAW,EAAE,2BAA2B,EAAE,QAAQ,EAAE,CAAC,sCAAsC,EAAE,sCAAsC,CAAC,EAAE;YAClM,EAAE,EAAE,EAAE,YAAY,EAAE,IAAI,EAAE,oBAAoB,EAAE,WAAW,EAAE,gBAAgB,EAAE,QAAQ,EAAE,CAAC,aAAa,EAAE,aAAa,CAAC,EAAE;YACzH,EAAE,EAAE,EAAE,aAAa,EAAE,IAAI,EAAE,aAAa,EAAE,WAAW,EAAE,sBAAsB,EAAE,QAAQ,EAAE,CAAC,mBAAmB,EAAE,mBAAmB,CAAC,EAAE;YACrI,EAAE,EAAE,EAAE,YAAY,EAAE,IAAI,EAAE,YAAY,EAAE,WAAW,EAAE,uBAAuB,EAAE,QAAQ,EAAE,CAAC,gBAAgB,CAAC,EAAE;SAC7G,CAAC;IACJ,CAAC;IAED,eAAe,CAAC,EAAU,EAAE,CAAS,EAAE,IAAc;QACnD,MAAM,GAAG,GAAqB,EAAE,CAAC;QACjC,KAAK,MAAM,CAAC,IAAI,IAAI,CAAC,oBAAoB,EAAE,EAAE,CAAC;YAC5C,KAAK,MAAM,CAAC,IAAI,CAAC,CAAC,QAAQ,EAAE,CAAC;gBAAC,MAAM,CAAC,GAAG,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;gBAAC,IAAI,CAAC,EAAE,CAAC;oBAAC,MAAM,GAAG,GAAG,IAAI,CAAC,cAAc,CAAC,CAAC,EAAE,CAAC,CAAC,KAAK,CAAC,CAAC;oBAAC,GAAG,CAAC,IAAI,CAAC,EAAE,QAAQ,EAAE,CAAC,CAAC,EAAE,EAAE,IAAI,EAAE,GAAG,CAAC,IAAI,EAAE,IAAI,EAAE,GAAG,CAAC,IAAI,EAAE,UAAU,EAAE,GAAG,EAAE,OAAO,EAAE,GAAG,CAAC,OAAO,EAAE,CAAC,CAAC;oBAAC,MAAM;gBAAC,CAAC;YAAC,CAAC;QAC1N,CAAC;QACD,OAAO,EAAE,IAAI,EAAE,EAAE,EAAE,eAAe,EAAE,GAAG,EAAE,WAAW,EAAE,IAAI,CAAC,eAAe,CAAC,EAAE,EAAE,CAAC,CAAC,EAAE,CAAC;IACtF,CAAC;CACF"}

package/dist/dna/gene-extractors/theming.d.ts

@@ -0,0 +1,10 @@
+import { BaseGeneExtractor, type AlleleDefinition, type FileExtractionResult } from './base-extractor.js';
+import type { GeneId } from '../types.js';
+export declare class ThemingExtractor extends BaseGeneExtractor {
+    readonly geneId: GeneId;
+    readonly geneName = "Theming";
+    readonly geneDescription = "How theming/dark mode is implemented";
+    getAlleleDefinitions(): AlleleDefinition[];
+    extractFromFile(fp: string, c: string, _imp: string[]): FileExtractionResult;
+}
+//# sourceMappingURL=theming.d.ts.map

package/dist/dna/gene-extractors/theming.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"theming.d.ts","sourceRoot":"","sources":["../../../src/dna/gene-extractors/theming.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,iBAAiB,EAAE,KAAK,gBAAgB,EAAE,KAAK,oBAAoB,EAAuB,MAAM,qBAAqB,CAAC;AAC/H,OAAO,KAAK,EAAE,MAAM,EAAE,MAAM,aAAa,CAAC;AAE1C,qBAAa,gBAAiB,SAAQ,iBAAiB;IACrD,QAAQ,CAAC,MAAM,EAAE,MAAM,CAAa;IACpC,QAAQ,CAAC,QAAQ,aAAa;IAC9B,QAAQ,CAAC,eAAe,0CAA0C;IAElE,oBAAoB,IAAI,gBAAgB,EAAE;IAU1C,eAAe,CAAC,EAAE,EAAE,MAAM,EAAE,CAAC,EAAE,MAAM,EAAE,IAAI,EAAE,MAAM,EAAE,GAAG,oBAAoB;CAO7E"}

package/dist/dna/gene-extractors/theming.js

@@ -0,0 +1,30 @@
+import { BaseGeneExtractor } from './base-extractor.js';
+export class ThemingExtractor extends BaseGeneExtractor {
+    geneId = 'theming';
+    geneName = 'Theming';
+    geneDescription = 'How theming/dark mode is implemented';
+    getAlleleDefinitions() {
+        return [
+            { id: 'tailwind-dark', name: 'Tailwind Dark Mode', description: 'dark: prefix', patterns: [/className\s*=\s*["'`][^"'`]*\bdark:/] },
+            { id: 'css-variables', name: 'CSS Variables', description: 'var(--*)', patterns: [/var\s*\(\s*--/] },
+            { id: 'theme-context', name: 'Theme Context', description: 'useTheme/ThemeProvider', patterns: [/useTheme\s*\(/, /ThemeProvider/] },
+            { id: 'styled-theming', name: 'Styled Theming', description: 'props.theme', patterns: [/props\.theme\./] },
+            { id: 'data-theme', name: 'Data Theme', description: 'data-theme attribute', patterns: [/data-theme\s*=/] },
+        ];
+    }
+    extractFromFile(fp, c, _imp) {
+        const det = [];
+        for (const d of this.getAlleleDefinitions()) {
+            for (const p of d.patterns) {
+                const m = p.exec(c);
+                if (m) {
+                    const ctx = this.extractContext(c, m.index);
+                    det.push({ alleleId: d.id, line: ctx.line, code: ctx.code, confidence: 0.8, context: ctx.context });
+                    break;
+                }
+            }
+        }
+        return { file: fp, detectedAlleles: det, isComponent: this.isComponentFile(fp, c) };
+    }
+}
+//# sourceMappingURL=theming.js.map

package/dist/dna/gene-extractors/theming.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"theming.js","sourceRoot":"","sources":["../../../src/dna/gene-extractors/theming.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,iBAAiB,EAAyE,MAAM,qBAAqB,CAAC;AAG/H,MAAM,OAAO,gBAAiB,SAAQ,iBAAiB;IAC5C,MAAM,GAAW,SAAS,CAAC;IAC3B,QAAQ,GAAG,SAAS,CAAC;IACrB,eAAe,GAAG,sCAAsC,CAAC;IAElE,oBAAoB;QAClB,OAAO;YACL,EAAE,EAAE,EAAE,eAAe,EAAE,IAAI,EAAE,oBAAoB,EAAE,WAAW,EAAE,cAAc,EAAE,QAAQ,EAAE,CAAC,qCAAqC,CAAC,EAAE;YACnI,EAAE,EAAE,EAAE,eAAe,EAAE,IAAI,EAAE,eAAe,EAAE,WAAW,EAAE,UAAU,EAAE,QAAQ,EAAE,CAAC,eAAe,CAAC,EAAE;YACpG,EAAE,EAAE,EAAE,eAAe,EAAE,IAAI,EAAE,eAAe,EAAE,WAAW,EAAE,wBAAwB,EAAE,QAAQ,EAAE,CAAC,eAAe,EAAE,eAAe,CAAC,EAAE;YACnI,EAAE,EAAE,EAAE,gBAAgB,EAAE,IAAI,EAAE,gBAAgB,EAAE,WAAW,EAAE,aAAa,EAAE,QAAQ,EAAE,CAAC,gBAAgB,CAAC,EAAE;YAC1G,EAAE,EAAE,EAAE,YAAY,EAAE,IAAI,EAAE,YAAY,EAAE,WAAW,EAAE,sBAAsB,EAAE,QAAQ,EAAE,CAAC,gBAAgB,CAAC,EAAE;SAC5G,CAAC;IACJ,CAAC;IAED,eAAe,CAAC,EAAU,EAAE,CAAS,EAAE,IAAc;QACnD,MAAM,GAAG,GAAqB,EAAE,CAAC;QACjC,KAAK,MAAM,CAAC,IAAI,IAAI,CAAC,oBAAoB,EAAE,EAAE,CAAC;YAC5C,KAAK,MAAM,CAAC,IAAI,CAAC,CAAC,QAAQ,EAAE,CAAC;gBAAC,MAAM,CAAC,GAAG,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;gBAAC,IAAI,CAAC,EAAE,CAAC;oBAAC,MAAM,GAAG,GAAG,IAAI,CAAC,cAAc,CAAC,CAAC,EAAE,CAAC,CAAC,KAAK,CAAC,CAAC;oBAAC,GAAG,CAAC,IAAI,CAAC,EAAE,QAAQ,EAAE,CAAC,CAAC,EAAE,EAAE,IAAI,EAAE,GAAG,CAAC,IAAI,EAAE,IAAI,EAAE,GAAG,CAAC,IAAI,EAAE,UAAU,EAAE,GAAG,EAAE,OAAO,EAAE,GAAG,CAAC,OAAO,EAAE,CAAC,CAAC;oBAAC,MAAM;gBAAC,CAAC;YAAC,CAAC;QAC1N,CAAC;QACD,OAAO,EAAE,IAAI,EAAE,EAAE,EAAE,eAAe,EAAE,GAAG,EAAE,WAAW,EAAE,IAAI,CAAC,eAAe,CAAC,EAAE,EAAE,CAAC,CAAC,EAAE,CAAC;IACtF,CAAC;CACF"}

package/dist/dna/gene-extractors/variant-handling.d.ts

@@ -0,0 +1,13 @@
+/**
+ * Variant Handling Gene Extractor
+ */
+import { BaseGeneExtractor, type AlleleDefinition, type FileExtractionResult } from './base-extractor.js';
+import type { GeneId } from '../types.js';
+export declare class VariantHandlingExtractor extends BaseGeneExtractor {
+    readonly geneId: GeneId;
+    readonly geneName = "Variant Handling";
+    readonly geneDescription = "How component variants are implemented";
+    getAlleleDefinitions(): AlleleDefinition[];
+    extractFromFile(fp: string, c: string, imp: string[]): FileExtractionResult;
+}
+//# sourceMappingURL=variant-handling.d.ts.map

package/dist/dna/gene-extractors/variant-handling.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"variant-handling.d.ts","sourceRoot":"","sources":["../../../src/dna/gene-extractors/variant-handling.ts"],"names":[],"mappings":"AAAA;;GAEG;AAEH,OAAO,EAAE,iBAAiB,EAAE,KAAK,gBAAgB,EAAE,KAAK,oBAAoB,EAAuB,MAAM,qBAAqB,CAAC;AAC/H,OAAO,KAAK,EAAE,MAAM,EAAE,MAAM,aAAa,CAAC;AAE1C,qBAAa,wBAAyB,SAAQ,iBAAiB;IAC7D,QAAQ,CAAC,MAAM,EAAE,MAAM,CAAsB;IAC7C,QAAQ,CAAC,QAAQ,sBAAsB;IACvC,QAAQ,CAAC,eAAe,4CAA4C;IAEpE,oBAAoB,IAAI,gBAAgB,EAAE;IAU1C,eAAe,CAAC,EAAE,EAAE,MAAM,EAAE,CAAC,EAAE,MAAM,EAAE,GAAG,EAAE,MAAM,EAAE,GAAG,oBAAoB;CAS5E"}

package/dist/dna/gene-extractors/variant-handling.js

@@ -0,0 +1,38 @@
+/**
+ * Variant Handling Gene Extractor
+ */
+import { BaseGeneExtractor } from './base-extractor.js';
+export class VariantHandlingExtractor extends BaseGeneExtractor {
+    geneId = 'variant-handling';
+    geneName = 'Variant Handling';
+    geneDescription = 'How component variants are implemented';
+    getAlleleDefinitions() {
+        return [
+            { id: 'classname-composition', name: 'className Composition', description: 'Using variant objects', patterns: [/const\s+variants\s*=\s*\{/, /className\s*=\s*\{?\s*variants\[/] },
+            { id: 'cva', name: 'CVA', description: 'Class Variance Authority', patterns: [/cva\s*\(/], importPatterns: [/class-variance-authority/] },
+            { id: 'conditional-classes', name: 'Conditional Classes', description: 'clsx/cn utilities', patterns: [/clsx\s*\(/, /\bcn\s*\(/] },
+            { id: 'styled-variants', name: 'Styled Variants', description: 'styled-components', patterns: [/styled\.\w+`[^`]*\$\{props/] },
+            { id: 'data-attributes', name: 'Data Attributes', description: 'data-variant', patterns: [/data-variant\s*=/] },
+        ];
+    }
+    extractFromFile(fp, c, imp) {
+        const det = [];
+        const isComp = this.isComponentFile(fp, c);
+        for (const d of this.getAlleleDefinitions()) {
+            if (d.importPatterns?.some(p => imp.some(i => p.test(i)))) {
+                det.push({ alleleId: d.id, line: 1, code: '', confidence: 0.9 });
+                continue;
+            }
+            for (const p of d.patterns) {
+                const m = p.exec(c);
+                if (m) {
+                    const ctx = this.extractContext(c, m.index);
+                    det.push({ alleleId: d.id, line: ctx.line, code: ctx.code, confidence: 0.8, context: ctx.context });
+                    break;
+                }
+            }
+        }
+        return { file: fp, detectedAlleles: det, isComponent: isComp };
+    }
+}
+//# sourceMappingURL=variant-handling.js.map

package/dist/dna/gene-extractors/variant-handling.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"variant-handling.js","sourceRoot":"","sources":["../../../src/dna/gene-extractors/variant-handling.ts"],"names":[],"mappings":"AAAA;;GAEG;AAEH,OAAO,EAAE,iBAAiB,EAAyE,MAAM,qBAAqB,CAAC;AAG/H,MAAM,OAAO,wBAAyB,SAAQ,iBAAiB;IACpD,MAAM,GAAW,kBAAkB,CAAC;IACpC,QAAQ,GAAG,kBAAkB,CAAC;IAC9B,eAAe,GAAG,wCAAwC,CAAC;IAEpE,oBAAoB;QAClB,OAAO;YACL,EAAE,EAAE,EAAE,uBAAuB,EAAE,IAAI,EAAE,uBAAuB,EAAE,WAAW,EAAE,uBAAuB,EAAE,QAAQ,EAAE,CAAC,2BAA2B,EAAE,kCAAkC,CAAC,EAAE;YACjL,EAAE,EAAE,EAAE,KAAK,EAAE,IAAI,EAAE,KAAK,EAAE,WAAW,EAAE,0BAA0B,EAAE,QAAQ,EAAE,CAAC,UAAU,CAAC,EAAE,cAAc,EAAE,CAAC,0BAA0B,CAAC,EAAE;YACzI,EAAE,EAAE,EAAE,qBAAqB,EAAE,IAAI,EAAE,qBAAqB,EAAE,WAAW,EAAE,mBAAmB,EAAE,QAAQ,EAAE,CAAC,WAAW,EAAE,WAAW,CAAC,EAAE;YAClI,EAAE,EAAE,EAAE,iBAAiB,EAAE,IAAI,EAAE,iBAAiB,EAAE,WAAW,EAAE,mBAAmB,EAAE,QAAQ,EAAE,CAAC,4BAA4B,CAAC,EAAE;YAC9H,EAAE,EAAE,EAAE,iBAAiB,EAAE,IAAI,EAAE,iBAAiB,EAAE,WAAW,EAAE,cAAc,EAAE,QAAQ,EAAE,CAAC,kBAAkB,CAAC,EAAE;SAChH,CAAC;IACJ,CAAC;IAED,eAAe,CAAC,EAAU,EAAE,CAAS,EAAE,GAAa;QAClD,MAAM,GAAG,GAAqB,EAAE,CAAC;QACjC,MAAM,MAAM,GAAG,IAAI,CAAC,eAAe,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC;QAC3C,KAAK,MAAM,CAAC,IAAI,IAAI,CAAC,oBAAoB,EAAE,EAAE,CAAC;YAC5C,IAAI,CAAC,CAAC,cAAc,EAAE,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,GAAG,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC;gBAAC,GAAG,CAAC,IAAI,CAAC,EAAE,QAAQ,EAAE,CAAC,CAAC,EAAE,EAAE,IAAI,EAAE,CAAC,EAAE,IAAI,EAAE,EAAE,EAAE,UAAU,EAAE,GAAG,EAAE,CAAC,CAAC;gBAAC,SAAS;YAAC,CAAC;YAC1I,KAAK,MAAM,CAAC,IAAI,CAAC,CAAC,QAAQ,EAAE,CAAC;gBAAC,MAAM,CAAC,GAAG,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;gBAAC,IAAI,CAAC,EAAE,CAAC;oBAAC,MAAM,GAAG,GAAG,IAAI,CAAC,cAAc,CAAC,CAAC,EAAE,CAAC,CAAC,KAAK,CAAC,CAAC;oBAAC,GAAG,CAAC,IAAI,CAAC,EAAE,QAAQ,EAAE,CAAC,CAAC,EAAE,EAAE,IAAI,EAAE,GAAG,CAAC,IAAI,EAAE,IAAI,EAAE,GAAG,CAAC,IAAI,EAAE,UAAU,EAAE,GAAG,EAAE,OAAO,EAAE,GAAG,CAAC,OAAO,EAAE,CAAC,CAAC;oBAAC,MAAM;gBAAC,CAAC;YAAC,CAAC;QAC1N,CAAC;QACD,OAAO,EAAE,IAAI,EAAE,EAAE,EAAE,eAAe,EAAE,GAAG,EAAE,WAAW,EAAE,MAAM,EAAE,CAAC;IACjE,CAAC;CACF"}

package/dist/dna/health-calculator.d.ts

@@ -0,0 +1,21 @@
+/**
+ * Health Calculator
+ *
+ * Calculates the health score and genetic diversity metrics for a DNA profile.
+ */
+import type { Gene, GeneId, Mutation, DNAThresholds } from './types.js';
+export declare class HealthCalculator {
+    private readonly thresholds;
+    constructor(thresholds?: Partial<DNAThresholds>);
+    calculateHealthScore(genes: Record<GeneId, Gene>, mutations: Mutation[]): number;
+    calculateGeneticDiversity(genes: Record<GeneId, Gene>): number;
+    private calculateAverageConsistency;
+    private calculateAverageConfidence;
+    private calculateMutationPenalty;
+    private calculateDominantCoverage;
+    private calculateEntropy;
+    getHealthLevel(score: number): 'excellent' | 'good' | 'fair' | 'poor';
+    isWarning(score: number): boolean;
+    isCritical(score: number): boolean;
+}
+//# sourceMappingURL=health-calculator.d.ts.map

package/dist/dna/health-calculator.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"health-calculator.d.ts","sourceRoot":"","sources":["../../src/dna/health-calculator.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAEH,OAAO,KAAK,EAAE,IAAI,EAAE,MAAM,EAAE,QAAQ,EAAE,aAAa,EAAE,MAAM,YAAY,CAAC;AAGxE,qBAAa,gBAAgB;IAC3B,OAAO,CAAC,QAAQ,CAAC,UAAU,CAAgB;gBAE/B,UAAU,GAAE,OAAO,CAAC,aAAa,CAAM;IAInD,oBAAoB,CAAC,KAAK,EAAE,MAAM,CAAC,MAAM,EAAE,IAAI,CAAC,EAAE,SAAS,EAAE,QAAQ,EAAE,GAAG,MAAM;IAoBhF,yBAAyB,CAAC,KAAK,EAAE,MAAM,CAAC,MAAM,EAAE,IAAI,CAAC,GAAG,MAAM;IAmB9D,OAAO,CAAC,2BAA2B;IAKnC,OAAO,CAAC,0BAA0B;IAKlC,OAAO,CAAC,wBAAwB;IAsBhC,OAAO,CAAC,yBAAyB;IAQjC,OAAO,CAAC,gBAAgB;IAQxB,cAAc,CAAC,KAAK,EAAE,MAAM,GAAG,WAAW,GAAG,MAAM,GAAG,MAAM,GAAG,MAAM;IAOrE,SAAS,CAAC,KAAK,EAAE,MAAM,GAAG,OAAO;IAIjC,UAAU,CAAC,KAAK,EAAE,MAAM,GAAG,OAAO;CAGnC"}