dorfl 0.3.1 → 0.4.0

package/dist/scan.js.map

@@ -1 +1 @@
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package/dist/skills/convert-from-prd-to-spec/SKILL.md

@@ -17,7 +17,7 @@ It is authored for the ONE cutover that exists (`prd → spec`), not pre-general
 Run the purpose-named migration command; it owns everything deterministic and gated. Do NOT re-implement its layers in the skill — the skill CALLS the command and reads its report.
 
 1. **Preview first:** run `dorfl prd-to-spec --dry-run`. It reports exactly what each layer WOULD do, touching nothing. Read the report; proceed only if it looks right.
-2. **Apply:** run `dorfl prd-to-spec`. In ONE command it: checks quiescence (refuses loudly on a dirty tree / a held per-item lock / an in-progress work-branch, NAMING the offender); re-syncs the repo's `work/protocol/*` contract from the package-canonical source (never the target's old copy) and bumps `work/protocol/VERSION`; converts the DATA — the `work/**` folders (via `git mv`), the item frontmatter + inert path/token refs across ALL items INCLUDING terminal history (`work/tasks/done/`, `work/specs/tasked/`), the `.dorfl.json` config keys, and the inert git refs (lock refs + work-branches); and then runs its OWN forward+reverse leak scan over the converted tree as the command's acceptance gate.
+2. **Apply:** run `dorfl prd-to-spec`. In ONE command it: checks quiescence (refuses loudly on a dirty tree / a held per-item lock / an in-progress work-branch, NAMING the offender); re-syncs the repo's `work/protocol/*` contract from the package-canonical source (never the target's old copy) and bumps `work/protocol/VERSION`; converts the DATA — the `work/**` folders (via `git mv`), the item frontmatter + inert path/token refs across ALL items INCLUDING terminal history (`work/tasks/done/`, `work/specs/tasked/`), the `dorfl.json` config keys, and the inert git refs (lock refs + work-branches); and then runs its OWN forward+reverse leak scan over the converted tree as the command's acceptance gate.
 3. **Gate on green:** only proceed to Half 2 when the command reports a clean/green result (no quiescence refusal, no leaks). If it refused, resolve the named offender (commit/stash, release the lock, land/prune the branch) and re-run. The command is idempotent: a second run on an already-migrated repo is a no-op.
 
 ### Half 2 — judgement: sweep the prose the command SKIPS
@@ -46,7 +46,7 @@ The command is the FAST PATH, not a hard dependency (adopt/convert is a runner-a
 2. `resyncProtocol` — copy the canonical `work/protocol/*` contract and bump `VERSION`.
 3. `migrateFolders` — `git mv` the `work/**` lifecycle folders to the new spelling.
 4. `migrateItemContent` — rewrite the frontmatter field key + inert path/token refs across every item (including terminal history).
-5. `migrateConfig` — rename the `.dorfl.json` config keys, preserving their values.
+5. `migrateConfig` — rename the `dorfl.json` config keys, preserving their values.
 6. `migrateRefs` — rename the inert lock refs + work-branches.
 7. `scanForLeaks` — run the forward+reverse gate over the converted tree.
 

package/dist/skills/drive-tasks/SKILL.md

@@ -140,7 +140,7 @@ From the READY set, order by: (a) **dependency** (a task that unlocks others fir
 dorfl do task:<slug> --isolated
 ```
 
-**`--isolated` is the one flag this skill mandates. Everything else — review mode, integration mode, harness, model — is LET TO CONFIG** (resolved `flag > env > per-repo > global > default`), so do NOT hardcode `--review`/`--propose`/`--merge` here: the repo's `.dorfl.json` decides, and `do --propose` is already the default. (`--isolated` reads the target repo's committed `.dorfl.json` from the arbiter's main, so per-repo `harness`/`verify`/`noPR`/`review` apply automatically — no `--harness`/env workaround.) **At the START of a drive, CONFIRM the run mode with the user** — do they want Gate 2 (`--review`, off by default — the human-first family default), and propose vs merge integration? — and add `--review` / `--merge` / etc. as explicit per-run OVERRIDES only when the user asks; otherwise let config drive every build of the drive.
+**`--isolated` is the one flag this skill mandates. Everything else — review mode, integration mode, harness, model — is LET TO CONFIG** (resolved `flag > env > per-repo > global > default`), so do NOT hardcode `--review`/`--propose`/`--merge` here: the repo's `dorfl.json` decides, and `do --propose` is already the default. (`--isolated` reads the target repo's committed `dorfl.json` from the arbiter's main, so per-repo `harness`/`verify`/`noPR`/`review` apply automatically — no `--harness`/env workaround.) **At the START of a drive, CONFIRM the run mode with the user** — do they want Gate 2 (`--review`, off by default — the human-first family default), and propose vs merge integration? — and add `--review` / `--merge` / etc. as explicit per-run OVERRIDES only when the user asks; otherwise let config drive every build of the drive.
 
 After a failed/aborted isolated run, a stale job worktree can linger and block the next build's mirror fetch — run `dorfl gc` (or `gc --force --yes` once you've confirmed the work is safe on the arbiter) to reap it before continuing. Use a **generous timeout** — `do` runs a build agent + the full gate + (if enabled) the Gate-2 review and can take well over an hour for a big task. If you interrupt it, KILL the spawned `do`/agent process tree explicitly (an abort of your wrapper does NOT stop the child); the isolated worktree is then reaped/recovered via `gc` + the kept arbiter branch (your checkout is untouched).
 

package/dist/skills/from-idea/SKILL.md

@@ -13,7 +13,7 @@ It is an **on-ramp** (per `work/SKILL.md`'s taxonomy — a starting situation th
 ## What it is NOT (the boundaries that keep it thin)
 
 - **NOT a spec-producer of its own.** `to-spec` writes the spec (it owns the spec shape, the `work/protocol/spec-template.md`, the launch-snapshot banner, the `specs/ready/` target, the two autonomy axes). from-idea is the FRONT DOOR that calls it. Read the two names as a pair: `from-idea` owns the on-ramp (setup + the interview); `to-spec` is the synthesis primitive it hands the conversation to. Do not reimplement any of to-spec here.
-- **NOT a scaffolder of its own.** `setup` owns the `work/` skeleton, the `work/protocol/` docs, `CONTEXT.md`, the `.dorfl.json` `verify`/`prepare` gate, and the empty-vs-populated detection. from-idea CALLS setup; it never hand-rolls a "is this a contract repo?" check or writes `CONTEXT.md` itself (that forks setup's detection and drifts). The one-way direction is fixed: **from-idea calls setup; setup never calls from-idea** (setup stays a focused adoption primitive). setup's empty-repo branch MAY _mention_ from-idea as the next step — a discoverability pointer, never an invocation.
+- **NOT a scaffolder of its own.** `setup` owns the `work/` skeleton, the `work/protocol/` docs, `CONTEXT.md`, the `dorfl.json` `verify`/`prepare` gate, and the empty-vs-populated detection. from-idea CALLS setup; it never hand-rolls a "is this a contract repo?" check or writes `CONTEXT.md` itself (that forks setup's detection and drifts). The one-way direction is fixed: **from-idea calls setup; setup never calls from-idea** (setup stays a focused adoption primitive). setup's empty-repo branch MAY _mention_ from-idea as the next step — a discoverability pointer, never an invocation.
 - **NOT adversarial grilling.** Stress-testing a plan/design before building is the personal `grilling` skill's job. from-idea clarifies only enough to be spec-worthy and DEFERS the rest (see the interview floor below). If the user wants the idea grilled, that is a separate move after the spec lands.
 
 ## The sequence (honor BOTH human checkpoints; never auto-commit)
@@ -52,7 +52,7 @@ So you interview ONCE. When setup's A2 asks "what is this repo about?", you alre
 
 **Always invoke `setup`** — do NOT hand-roll a `test -d work/` to decide whether to. setup's A1 already detects empty-vs-populated and does the right thing in each case, and re-running it on an existing contract repo **re-syncs the `work/protocol/` docs** (the one legitimate clobber) so the repo picks up protocol updates. Skipping setup would skip that refresh and fork its detection logic.
 
-- **Empty / new repo (the common from-idea case):** setup does Phase A — scaffolds `work/`, copies `work/protocol/`, writes `CONTEXT.md` (from the description you gathered in step 1) and `.dorfl.json` (the `verify`/`prepare` gate it detects, presented for confirmation at its HARD STOP). Phase B is empty.
+- **Empty / new repo (the common from-idea case):** setup does Phase A — scaffolds `work/`, copies `work/protocol/`, writes `CONTEXT.md` (from the description you gathered in step 1) and `dorfl.json` (the `verify`/`prepare` gate it detects, presented for confirmation at its HARD STOP). Phase B is empty.
 - **Existing contract repo (adding a new idea to a repo already set up):** setup's Phase A is a near-no-op + protocol re-sync; the scaffold already exists. You then go straight to step 3. **Flag the Phase-B-hijack seam:** if the repo is populated with convertible material, be explicit that the intent is "scaffold/refresh and accept a NEW idea", not "migrate everything" — do not let setup's Phase-B conversion hijack the from-idea session. (A new idea is not migration of existing material.)
 
 Honor setup's HARD STOP: present the plan, wait for confirmation, then it scaffolds. Feed it the description from step 1 so its A2 does not re-ask.

package/dist/skills/setup/SKILL.md

@@ -37,7 +37,7 @@ An **ADR** (`docs/adr/`) records a **DECISION + its why** — the rejected optio
 `ls`/glob the repo first. For EACH artifact setup would write, if it ALREADY exists, do NOT overwrite — report it and leave it (or, for `dorfl.json` / `CONTEXT.md`, offer to MERGE-in only the missing keys/sections). Only CREATE what is missing. This is what makes setup safe to run on a populated repo and idempotent to re-run.
 
 - If `work/` already has the folders → skip them. **If `work/` is on the LEGACY FLAT layout** (top-level `backlog/` / `prd/` / `observations/` / … instead of the `notes/` / `tasks/` / `specs/` umbrellas) → do NOT silently scaffold a second, parallel tree beside it; surface it and offer the documented migration mapping (see A5b).
-- **`work/protocol/` is the ONE exception to never-clobber — it is protocol-owned, not repo-owned.** The repo's `work/` _items_ (tasks/specs/notes) are sacred and never touched; but the `work/protocol/` reference docs are verbatim copies setup owns, so re-running setup **re-syncs** them (overwrite with the current canonical copies + bump `work/protocol/VERSION`). This is how a repo picks up protocol updates. Never hand-edit `work/protocol/<doc>` in a target repo — edits belong in setup's canonical `protocol/` source and propagate via re-sync.
+- **`work/protocol/` is the ONE exception to never-clobber — it is protocol-owned, not repo-owned.** The repo's `work/` _items_ (tasks/specs/notes) are sacred and never touched; but the `work/protocol/` reference docs are verbatim copies setup owns, so re-running setup **re-syncs** them (overwrite with the current canonical copies + bump `work/protocol/VERSION`). This is how a repo picks up protocol updates. (If `dorfl` is installed, `dorfl sync` is the focused, non-interactive way to do JUST this re-sync — no re-scan/conversation — and can additionally `--add-skills` to refresh the operator's packaged skills.) Never hand-edit `work/protocol/<doc>` in a target repo — edits belong in setup's canonical `protocol/` source and propagate via re-sync.
 - If `CONTEXT.md` exists → do not overwrite; offer to APPEND a "domain terms" section if absent, else leave it.
 - If `dorfl.json` exists → do not overwrite; report its `verify`/`harness` and offer to fill only ABSENT keys.
 - **Detect Phase B material — do NOT skip dotfolders that might hold meaningful content.** While inventorying, note any **convertible material**: a `tasks/` folder, a `TODO.md`, an issue-tracker export, `docs/` design notes / RFCs, plan files, and **substantial source code** (code that embodies decisions). A plain `ls` of the visible top level is NOT enough: a hidden (dot-prefixed) folder can hold real sources (design docs, plans, tasks, notes), and a missed source is silently under-routed (a rich design doc that should be a spec never gets seen). So look inside dotfolders too, and judge each by whether it _could plausibly contain documents/plans/notes_ worth converting. **Skip only the noise** — `.git/`, `node_modules/` and other dependency dirs, build output, and anything `.gitignore`d are never sources. This detection decides whether Phase B runs (see A4 / Phase B). A repo with only a README that says "clean slate" (or nothing) → Phase B is empty; finish after Phase A.
@@ -110,7 +110,7 @@ work/
   protocol/                               # the propagated protocol docs (copied below)
 ```
 
-The two won't-proceed terminals are deliberately named DIFFERENTLY per regime (`tasks/cancelled/` vs `specs/dropped/`) — a slug-collision correctness fix (a dropped task and a dropped spec sharing a slug must not collide on one bare-slug path); see `work/protocol/WORK-CONTRACT.md`. Then **copy the protocol docs verbatim into `work/protocol/`** from this skill's `protocol/` directory (`WORK-CONTRACT.md`, `CLAIM-PROTOCOL.md`, `REVIEW-PROTOCOL.md`, `task-template.md`, `spec-template.md`, `ADR-FORMAT.md`) and write `work/protocol/VERSION` — creating them if absent, RE-SYNCING (overwriting) them if present (protocol-owned, per A1); write `CONTEXT.md` and `dorfl.json` if absent (or merge-in missing keys per A1). NOTE: `dorfl.json` (plain, non-dotfile) is the name setup CREATES and dorfl PREFERS; a repo that already committed the legacy `.dorfl.json` (dotfile) is still honoured on READ (dorfl falls back to it), so on a re-run against a legacy repo, MERGE-into the existing `.dorfl.json` in place rather than creating a second `dorfl.json` (do not end up with both).
+The two won't-proceed terminals are deliberately named DIFFERENTLY per regime (`tasks/cancelled/` vs `specs/dropped/`) — a slug-collision correctness fix (a dropped task and a dropped spec sharing a slug must not collide on one bare-slug path); see `work/protocol/WORK-CONTRACT.md`. Then **copy the protocol docs verbatim into `work/protocol/`** from this skill's `protocol/` directory (`WORK-CONTRACT.md`, `CLAIM-PROTOCOL.md`, `REVIEW-PROTOCOL.md`, `task-template.md`, `spec-template.md`, `ADR-FORMAT.md`) and write `work/protocol/VERSION` — creating them if absent, RE-SYNCING (overwriting) them if present (protocol-owned, per A1); write `CONTEXT.md` and `dorfl.json` if absent (or merge-in missing keys per A1). NOTE: `dorfl.json` (plain, non-dotfile) is the name setup CREATES and dorfl PREFERS; a repo that already committed the legacy `dorfl.json` (dotfile) is still honoured on READ (dorfl falls back to it), so on a re-run against a legacy repo, MERGE-into the existing `dorfl.json` in place rather than creating a second `dorfl.json` (do not end up with both).
 
 **Run the gate ONCE and report (catch a wrong `verify` immediately).** After writing `dorfl.json`, actually EXECUTE the `verify` command once and report green/red — the cheapest moment to discover the gate is wrong (a typo, a missing script, deps not installed), instead of at first build. If red, say WHY (e.g. "`format:check` failed — run `format` first" / "`build` needs deps installed") and offer to adjust the gate or note the prep step; do NOT silently leave a red gate. (Deps clearly not installed = the env-prep gap — that is what the `prepare` field is FOR: put the install in `prepare` (A3b), do NOT contort `verify` to hide it.)
 

package/dist/skills/setup/protocol/WORK-CONTRACT.md

@@ -210,7 +210,7 @@ The autonomy gate is TWO orthogonal binary fields (both default to omitted = fal
 - **`humanOnly: true` — the DECIDED axis.** _Should a human drive this, regardless of how complete the spec is?_ A product/design/security/judgement call, or an `AGENTS.md`-type rule. Driven by a decision (in the spec conversation, or the tasker's own judgement). On a SPEC it means "a human must drive the tasking". On a TASK it is the NARROW "never-for-agents BY NATURE" guard (secrets/release/security) that **survives even when the task resides in the agent pool `work/tasks/ready/`**. Task `humanOnly` is NOT the tool for ordinary "a human should review this before the agent builds it" — that job belongs to POSITION (the runner births the task STAGED in `work/tasks/backlog/`; a human promotes the approved ones into the pool `work/tasks/ready/`). See "Task `humanOnly` is NARROW" below.
 - **`needsAnswers: true` — the DISCOVERED axis.** _Are there unresolved questions blocking autonomous progress?_ The spec is incomplete; **the open questions live in the body**. Once answered, the flag is cleared and an agent may proceed.
 - They are **orthogonal** — four honest states. e.g. `humanOnly:true, needsAnswers:false` = fully specified but a human must own it; `humanOnly:false, needsAnswers:true` = anyone can do it once the questions are answered.
-- **Repo policy `autoBuild`** answers the question the _repo_ owns: _may agents auto-build undeclared items here?_ The build member of the symmetric per-action gate family (`autoBuild`/`autoTask`/`observationTriage`). Per-repo config key (`.dorfl.json`), resolved like `integration`: **CLI flag (`--auto-build` / `--no-auto-build`) > env (`DORFL_AUTO_BUILD`) > per-repo config > global config > built-in default (`false`)**.
+- **Repo policy `autoBuild`** answers the question the _repo_ owns: _may agents auto-build undeclared items here?_ The build member of the symmetric per-action gate family (`autoBuild`/`autoTask`/`observationTriage`). Per-repo config key (`dorfl.json`), resolved like `integration`: **CLI flag (`--auto-build` / `--no-auto-build`) > env (`DORFL_AUTO_BUILD`) > per-repo config > global config > built-in default (`false`)**.
 
 **Predicate (same shape at both levels):** an item is **auto-eligible** iff `needsAnswers` is not `true` AND `humanOnly` is not `true` AND `autoBuild` is `true`. A human is never bound by it (a human may task/build a flagged item — the gate binds the agent, like the runner-vs-human stance on `verify`).
 

package/dist/verify-workflow-template.d.ts

@@ -13,7 +13,7 @@
  *
  * The workflow is deliberately thin: it wires the same composite setup action
  * the other capabilities use, then runs `dorfl verify` — the deterministic shell
- * gate the repo declares in `.dorfl.json`. No agent, no provider secrets, no
+ * gate the repo declares in `dorfl.json`. No agent, no provider secrets, no
  * `gh` mutation; it is read-only with respect to `work/`.
  *
  * `merge_group` is present (with no extra wiring) so a follow-on Tier-2 task

package/dist/verify-workflow-template.js

@@ -13,7 +13,7 @@
  *
  * The workflow is deliberately thin: it wires the same composite setup action
  * the other capabilities use, then runs `dorfl verify` — the deterministic shell
- * gate the repo declares in `.dorfl.json`. No agent, no provider secrets, no
+ * gate the repo declares in `dorfl.json`. No agent, no provider secrets, no
  * `gh` mutation; it is read-only with respect to `work/`.
  *
  * `merge_group` is present (with no extra wiring) so a follow-on Tier-2 task

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "dorfl",
-  "version": "0.3.1",
+  "version": "0.4.0",
   "repository": {
     "type": "git",
     "url": "git+https://github.com/wighawag/dorfl.git",

package/src/advance-drivers.ts

@@ -93,7 +93,7 @@ export interface PerformAdvanceMultiOptions extends SharedAdvanceContext {
 	/**
 	 * The per-machine {@link ConfigOverrideMap}. Threaded into the in-place pool
 	 * scan (`scanRepoPaths`) so the per-machine override applies to advance
-	 * autopick eligibility — WITHOUT it the committed `.dorfl.json` silently
+	 * autopick eligibility — WITHOUT it the committed `dorfl.json` silently
 	 * beats the override on this path (the in-place advance autopick mirror of the
 	 * `do` autopick defect).
 	 */

package/src/advance-lifecycle-template.ts

@@ -176,7 +176,7 @@ on:
       # Override an engine gate for THIS manual run only, riding the env layer of
       # flag > env > per-repo > global > default. Modelled as \`type: choice\` with a
       # BLANK first option (not \`type: boolean\`, which cannot represent "unset"):
-      # blank ⇒ emit NOTHING (the committed .dorfl.json wins, today's
+      # blank ⇒ emit NOTHING (the committed dorfl.json wins, today's
       # behaviour); a non-blank choice ⇒ export the matching DORFL_* for this
       # run. The blank is load-bearing: env-config coercion THROWS on an empty
       # string, so the per-job step below only writes when the input is non-blank.
@@ -247,11 +247,11 @@ env:
   # ── The engine GATE FAMILY is resolved FROM CONFIG, not carried here ─────────
   # CI is NOT a special policy surface (ADR ci-config-policy-and-gate-family §5):
   # it runs the SAME engine gates, resolved through flag > env > per-repo > global
-  # > default. The SAME .dorfl.json the laptop uses applies here. This
+  # > default. The SAME dorfl.json the laptop uses applies here. This
   # workflow emits NO DORFL_AUTO_BUILD / DORFL_AUTO_TASK /
   # DORFL_OBSERVATION_TRIAGE / DORFL_SURFACE_BLOCKERS line on a
   # SCHEDULE/PUSH tick, so the env layer carries NO defaults there — your committed
-  # .dorfl.json wins (then the global config, then the strict built-in
+  # dorfl.json wins (then the global config, then the strict built-in
   # defaults autoBuild:false / autoTask:false / observationTriage:'off' /
   # surfaceBlockers:false). The ONE exception is a manual \`workflow_dispatch\` where
   # you fill a gate override input (above): the per-job step then exports that ONE
@@ -260,7 +260,7 @@ env:
   # \`enumerate\` scan (it gates the matrix pools via observationTriage/surfaceBlockers
   # /autoTask/autoBuild), not just the agent-running jobs — or the override is inert
   # for the very pools it targets. To enable CI autonomy durably, set the gate(s) in
-  # .dorfl.json (applies everywhere) — NOT by re-running install-ci (ADR §6:
+  # dorfl.json (applies everywhere) — NOT by re-running install-ci (ADR §6:
   # install-ci is one-time).
 
 jobs:
@@ -477,7 +477,7 @@ jobs:
       - name: advance one item in-place (merge ⇒ rebase + CAS land on main)
         # In-place (no --isolated/--remote). \`--merge\` ties the integration mode
         # to THIS (matrix) shape: it sits at the top of the precedence chain, so
-        # the workflow mode always wins over the repo's \`.dorfl.json\` default.
+        # the workflow mode always wins over the repo's \`dorfl.json\` default.
         # Cross-job land safety comes from the engine's CAS-retry loop, not from
         # this workflow's job shape. \`gh\` (merge / PR housekeeping) reads
         # \`GH_TOKEN\` from the env.
@@ -644,7 +644,7 @@ export function validateAdvanceLifecycleWorkflow(
 	// The workflow emits NO active gate env line for any of AUTO_BUILD / AUTO_TASK
 	// / OBSERVATION_TRIAGE / SURFACE_BLOCKERS: the env layer is the OPTIONAL CI-only
 	// override layer, NOT the carrier of defaults. Emitting any of them would FORCE
-	// env to win over the repo's own .dorfl.json (the precedence is
+	// env to win over the repo's own dorfl.json (the precedence is
 	// flag > env > per-repo > global > default), silently shadowing per-repo gate
 	// config in CI — exactly the bug this task closes. A user who genuinely wants a
 	// CI-SPECIFIC override adds the env var themselves (the opt-in CI override the

package/src/brand.ts

@@ -8,7 +8,7 @@
  *
  *   - the `DORFL_` env-var prefix (a missed one is read as "unset" — the
  *     worst kind of failure: silent);
- *   - the `.dorfl.json` per-repo config filename;
+ *   - the `dorfl.json` per-repo config filename;
  *   - the `~/.dorfl/` workspaces-dir default + the `dorfl` config
  *     dir name;
  *   - the `.dorfl-job.json` per-job record filename;

package/src/cli.ts

@@ -114,6 +114,7 @@ import {
 	type PrdToSpecResult,
 	type DataLeak,
 } from './prd-to-spec.js';
+import {resyncProtocol, type ResyncResult} from './resync-protocol.js';
 import {sweepRemoteMergedBranches} from './reap-branches.js';
 import {sweepOrphanSidecars} from './orphan-sidecar.js';
 import {sweepLedgerDuplicates, formatLedgerSweep} from './ledger-lint.js';
@@ -232,7 +233,7 @@ function loadGlobalAndOverride(configPath: string | undefined): {
 
 /**
  * Resolve the effective config for a `do --remote <r>` run, layering the target
- * repo's COMMITTED `.dorfl.json` (read from `<arbiter>/main` via the hub
+ * repo's COMMITTED `dorfl.json` (read from `<arbiter>/main` via the hub
  * mirror) into the SAME `flag > env > per-repo > global > default` chain in-place
  * `do` uses. This is the no-checkout analogue of {@link resolveRepoConfig}: there
  * is no working tree, so the bytes come from the arbiter's `main` instead of the
@@ -247,7 +248,7 @@ function loadGlobalAndOverride(configPath: string | undefined): {
  * the arbiter was momentarily offline.
  *
  * The config read uses {@link ensureMirrorMain} (main-only, NO-prune), NOT the
- * all-heads pruning {@link ensureMirror}: `git show main:.dorfl.json` only
+ * all-heads pruning {@link ensureMirror}: `git show main:dorfl.json` only
  * needs `main`, and the all-heads `+refs/heads/*:refs/heads/*` fetch would let a
  * `work/<slug>` branch CHECKED OUT in some stale job worktree block it (git
  * refuses to fetch into a checked-out branch), throwing the read into its
@@ -493,7 +494,7 @@ function resolveDefaultArbiterForCwd(
 	// The SAME per-repo config read in-place `do` uses (`resolveRepoConfig` on the
 	// cwd), so `--isolated` resolves the arbiter remote NAME (`defaultArbiter`)
 	// through the identical `flag > env > per-repo > global > default` chain. An
-	// absent `.dorfl.json` falls back to the global/default (`origin`).
+	// absent `dorfl.json` falls back to the global/default (`origin`).
 	return resolveRepoConfig({repoPath: cwd, global, flags, override}).config
 		.defaultArbiter;
 }
@@ -910,6 +911,91 @@ function printLeak(leak: DataLeak): void {
 	);
 }
 
+/**
+ * A minimal interactive yes/no confirmation (default NO). Prompts on stderr
+ * (stdout stays reserved for machine/report output) and reads one line from
+ * stdin. Callers only reach this on an interactive (TTY) session — a non-TTY
+ * path decides WITHOUT prompting (so a scripted run never hangs). Returns true
+ * only for an explicit `y`/`yes`.
+ */
+function confirmYesNo(message: string): Promise<boolean> {
+	return new Promise((resolvePrompt) => {
+		const rl = createInterface({input: process.stdin, output: process.stderr});
+		rl.question(`${message} [y/N] `, (answer) => {
+			rl.close();
+			const a = answer.trim().toLowerCase();
+			resolvePrompt(a === 'y' || a === 'yes');
+		});
+	});
+}
+
+interface SyncFlags {
+	/** The repo working-tree root to sync (default: cwd). */
+	repo?: string;
+	/** Report what WOULD change, touching nothing. */
+	dryRun?: boolean;
+	/**
+	 * ALSO (re-)install the packaged dorfl skills into the operator's own harness
+	 * dir(s), NON-INTERACTIVELY. This flag IS the confirmation: it BYPASSES the
+	 * interactive ask. Without it, an interactive (TTY) session PROMPTS once
+	 * before installing, and a non-TTY session skips the skills step entirely
+	 * (so a scripted `sync` never hangs). Either way, the protocol re-sync half
+	 * always runs.
+	 */
+	addSkills?: boolean;
+	/** With `--add-skills` (or a confirmed prompt): scope the skills install to <cwd>/.agents/skills/ instead of the global default. */
+	local?: boolean;
+	json?: boolean;
+}
+
+/**
+ * Human-readable report for the deterministic protocol re-sync half of
+ * `dorfl sync`. Groups the docs into changed / unchanged / skipped and names the
+ * VERSION file. `dryRun` reframes it as "WOULD" so a preview reads honestly.
+ * A SKIPPED doc (unresolvable source) is surfaced LOUDLY — the contract in the
+ * target repo is incomplete for that doc.
+ */
+export function formatSyncReport(
+	result: ResyncResult,
+	dryRun: boolean,
+): string {
+	const lines: string[] = [];
+	const changed = result.docs.filter((d) => !d.unchanged && !d.skipped);
+	const unchanged = result.docs.filter((d) => d.unchanged);
+	const skipped = result.docs.filter((d) => d.skipped);
+	const verb = dryRun ? 'WOULD sync' : 'Synced';
+	lines.push(
+		dryRun
+			? '=== dorfl sync (DRY RUN — nothing written) ==='
+			: '=== dorfl sync ===',
+	);
+	lines.push(
+		`Protocol: ${verb} ${result.docs.length} doc(s) — ` +
+			`${changed.length} changed, ${unchanged.length} unchanged, ` +
+			`${skipped.length} skipped.`,
+	);
+	for (const d of changed) {
+		lines.push(`  ~ ${d.dest}`);
+	}
+	for (const d of skipped) {
+		lines.push(
+			`  !! ${d.name}: SOURCE could not be resolved — NOT copied ` +
+				'(the contract doc is missing in the package).',
+		);
+	}
+	if (changed.length > 0 || skipped.length === result.docs.length) {
+		lines.push(
+			`VERSION: ${dryRun ? 'WOULD bump' : 'bumped'} ${result.versionPath}` +
+				(skipped.length === result.docs.length
+					? ' (no doc synced — no bump)'
+					: '.'),
+		);
+	} else {
+		lines.push(`VERSION: unchanged (${result.versionPath} — already current).`);
+	}
+	return lines.join('\n');
+}
+
 interface StatusFlags {
 	config?: string;
 	workspace?: string;
@@ -1893,7 +1979,7 @@ export function buildProgram(): Command {
 			const slug = resolveTaskOnlySlug(rawSlug);
 			// Resolve the `promptGuidance` NUDGE namespace through the SAME chain the
 			// gate family uses (env > per-repo > global > default), so e.g. a
-			// `promptGuidance.testFirst:true` in `.dorfl.json` strengthens the
+			// `promptGuidance.testFirst:true` in `dorfl.json` strengthens the
 			// wrapper line for `dorfl prompt` exactly as it would in `do`/`run`.
 			const cwd = process.cwd();
 			const global = loadConfig();
@@ -2052,7 +2138,7 @@ export function buildProgram(): Command {
 			}
 
 			// Resolve the integration mode at completion time, highest first:
-			//   --merge/--propose flag > per-repo .dorfl.json > global > default.
+			//   --merge/--propose flag > per-repo dorfl.json > global > default.
 			// The flag sits at the TOP of the same chain the autonomous runner uses
 			// (per-repo > global > default), so human and autonomous paths agree.
 			const flagMode = integrationFromFlags(flags);
@@ -2296,7 +2382,7 @@ export function buildProgram(): Command {
 			const cwd = process.cwd();
 			const {global, override} = loadGlobalAndOverride(flags.config);
 			// Resolve the integration mode at integrate-time, highest first:
-			//   --merge/--propose flag > per-repo .dorfl.json > global > default.
+			//   --merge/--propose flag > per-repo dorfl.json > global > default.
 			// (Same chain `complete` uses — `do` is the autonomous twin.)
 			let flagMode;
 			try {
@@ -2320,7 +2406,7 @@ export function buildProgram(): Command {
 			// ORTHOGONAL: `--isolated` + `--remote` is REDUNDANT (a foreign `--remote` is
 			// already isolated), so we accept it and `--remote` WINS (see `## Decisions`).
 			//
-			// In BOTH cases the repo's COMMITTED `.dorfl.json` is reachable on
+			// In BOTH cases the repo's COMMITTED `dorfl.json` is reachable on
 			// `<arbiter>/main` (the mirror), so we layer it — `flag > env > per-repo >
 			// global > default` parity with in-place `do` (task
 			// `remote-do-reads-per-repo-config-from-arbiter-main`). Only the whitelisted
@@ -2440,7 +2526,7 @@ export function buildProgram(): Command {
 				// mirror fetch runs under). These are host-only by definition (rejected
 				// per-repo), so reading them from global+flags first is correct and stable.
 				const bootstrap = resolveGlobalConfig(global, remoteFlags);
-				// Source the committed `.dorfl.json` from `<arbiter>/main` via the
+				// Source the committed `dorfl.json` from `<arbiter>/main` via the
 				// hub mirror, then layer ONLY its whitelisted keys through the EXISTING
 				// per-repo machinery. The read refreshes ONLY `main` (no-prune), so a
 				// `work/<slug>` branch checked out in a stale worktree can never block it,
@@ -2495,7 +2581,7 @@ export function buildProgram(): Command {
 					// Single-job build path: gate the REBASED tip (the default) unconditionally.
 					freshWorktreeGate: remoteConfig.freshWorktreeGate,
 					// Cross-job merge-serialiser CAS-retry cap (resolved through the per-repo
-					// chain on the arbiter-side `.dorfl.json` too) — spec
+					// chain on the arbiter-side `dorfl.json` too) — spec
 					// `land-time-reverify-and-parallel-merge-ceiling` Story 5.
 					mergeRetries: remoteConfig.mergeRetries,
 					noPR: remoteConfig.noPR,
@@ -2895,7 +2981,7 @@ export function buildProgram(): Command {
 			const cwd = process.cwd();
 			const {global, override} = loadGlobalAndOverride(flags.config);
 			// Resolve the integration mode this invocation asks for, highest first:
-			//   --merge/--propose flag > per-repo .dorfl.json > global > default.
+			//   --merge/--propose flag > per-repo dorfl.json > global > default.
 			// The SAME chain `do`/`complete` use (via `integrationFromFlags`), so the
 			// human, the autonomous runner, and the CI workflow all resolve the SAME
 			// order. This is what ties the CI dispatch `integrationMode` to the actual
@@ -2959,7 +3045,7 @@ export function buildProgram(): Command {
 					);
 					process.exit(1);
 				}
-				// Source the arbiter's COMMITTED `.dorfl.json` from `<arbiter>/main`
+				// Source the arbiter's COMMITTED `dorfl.json` from `<arbiter>/main`
 				// via the hub mirror + layer ONLY its whitelisted keys — the SAME
 				// resolution `do --isolated` uses, so the gate family (autoBuild/autoTask/
 				// observationTriage/surfaceBlockers) + selectionOrder + integration resolve
@@ -3541,6 +3627,77 @@ export function buildProgram(): Command {
 			);
 		});
 
+	// `dorfl sync`: bring an already-onboarded repo up to the CURRENT protocol.
+	// Always re-syncs `work/protocol/*` + bumps VERSION (the deterministic slice of
+	// `setup`, shared with `prd-to-spec` via `resync-protocol.ts`). `--add-skills`
+	// ADDITIONALLY (re-)installs the packaged skills into the operator's harness
+	// dir(s), NON-INTERACTIVELY (the flag IS the confirmation); without it an
+	// interactive session PROMPTS once and a non-TTY session skips skills.
+	program
+		.command('sync')
+		.helpGroup(HEADLINE_GROUP)
+		.description(
+			"Bring THIS repo up to the current dorfl protocol: re-sync work/protocol/* from the package's canonical contract docs and bump work/protocol/VERSION (idempotent — a no-op when already current). This is how a repo that adopted an older protocol picks up the latest. Optionally ALSO (re-)installs the packaged dorfl skills into your own harness: pass --add-skills to do it non-interactively (the flag bypasses the ask), otherwise an interactive run prompts once (a non-TTY run skips skills). Runs IN-PLACE (no git commit/push — the human commits the result).",
+		)
+		.option('--repo <dir>', 'the repo working-tree root to sync (default: cwd)')
+		.option(
+			'--dry-run',
+			'REPORT what the protocol re-sync WOULD change, touching nothing (no writes; skills are never installed under --dry-run)',
+		)
+		.option(
+			'--add-skills',
+			'ALSO (re-)install the packaged dorfl skills into your own harness dir(s), non-interactively. This flag IS the confirmation — it bypasses the interactive ask.',
+		)
+		.option(
+			'--local',
+			'with skills install: scope to <cwd>/.agents/skills/ instead of the global ~/.agents/skills/ default',
+		)
+		.option('--json', 'output the raw protocol re-sync result as JSON')
+		.action(async (flags: SyncFlags) => {
+			const repoPath = flags.repo ?? process.cwd();
+			const dryRun = flags.dryRun === true;
+
+			// 1. The deterministic protocol re-sync (always runs).
+			const resync = resyncProtocol(repoPath, {
+				dryRun,
+				sourceCommit: 'dorfl sync',
+			});
+			if (flags.json) {
+				console.log(JSON.stringify(resync, null, 2));
+			} else {
+				console.log(formatSyncReport(resync, dryRun));
+			}
+
+			// A doc whose source could not be resolved is a broken package — exit
+			// non-zero so a scripted `sync` notices the incomplete contract.
+			const anySkipped = resync.docs.some((d) => d.skipped);
+
+			// 2. The OPTIONAL skills install. Never under --dry-run (a preview writes
+			//    nothing). `--add-skills` authorises it directly (bypasses the ask);
+			//    otherwise an interactive TTY prompts once, and a non-TTY skips.
+			if (!dryRun) {
+				let doSkills = flags.addSkills === true;
+				if (!doSkills && process.stdin.isTTY) {
+					const scope = flags.local === true ? 'project-local' : 'global';
+					doSkills = await confirmYesNo(
+						`Also (re-)install the packaged dorfl skills into your ${scope} harness dir(s)?`,
+					);
+				}
+				if (doSkills) {
+					const result = installSkills({global: flags.local !== true});
+					console.log(formatSkillsAddReport(result, flags.local === true));
+				} else if (flags.addSkills !== true && !process.stdin.isTTY) {
+					console.error(
+						'>> Skills not installed (non-interactive run; pass --add-skills to install them).',
+					);
+				}
+			}
+
+			if (anySkipped) {
+				process.exit(1);
+			}
+		});
+
 	program
 		.command('prd-to-spec')
 		.helpGroup(ADVANCED_GROUP)

package/src/config-override.ts

@@ -6,7 +6,7 @@ import {defaultConfigPath, type PartialConfig} from './config.js';
  * The **per-machine config override layer** (ADR
  * `per-machine-config-override-layer`): a single file at
  * `<configDir>/config.override.json` (sibling of `config.json`) that overrides
- * the COMMITTED per-repo `.dorfl.json` but is itself overridden by env
+ * the COMMITTED per-repo `dorfl.json` but is itself overridden by env
  * and flags. It gives the laptop a stable, file-based, high-precedence per-
  * machine lever symmetric to CI's `DORFL_*` env, fixing "I can't make
  * this checkout override what the repo committed without an env var whose

package/src/do-autopick.ts

@@ -52,7 +52,7 @@ export interface PerformDoMultiOptions extends SharedDoOptions {
 	 * The per-machine {@link ConfigOverrideMap}. Threaded into the in-place pool
 	 * scan (`scanRepoPaths`) so the override applies to autopick eligibility just
 	 * as it does to the single-`do` resolution — WITHOUT it the committed
-	 * `.dorfl.json` silently beats the per-machine override on this path.
+	 * `dorfl.json` silently beats the per-machine override on this path.
 	 */
 	override?: ConfigOverrideMap;
 	/**

package/src/do-config.ts

@@ -539,7 +539,7 @@ export function doNeedsAgentCmd(config: Config): boolean {
  */
 export const NO_AGENT_CMD_MESSAGE =
 	'no harness configured and no agentCmd set — nothing would run. Pass ' +
-	'--harness pi (or set harness/agentCmd in .dorfl.json or global config).';
+	'--harness pi (or set harness/agentCmd in dorfl.json or global config).';
 
 /**
  * The shared up-front message for the PR-INTENT pre-flight refusal: a `propose`

package/src/env-config.ts

@@ -7,7 +7,7 @@ import {brand, constantCase} from './brand.js';
  * A per-machine context (a CI job, a developer's shell) can set ANY {@link Config}
  * key via an `DORFL_*` environment variable WITHOUT committing a file —
  * including the host-only keys (`piBin`, `agentCmd`, …) that the per-repo
- * `.dorfl.json` deliberately rejects.
+ * `dorfl.json` deliberately rejects.
  *
  * Env is a legitimate *per-machine source* — exactly like a CLI flag or the
  * global `~/.config/dorfl/config.json` — so it is NOT subject to the

package/src/identity.ts

@@ -76,7 +76,7 @@ export interface IdentityProviders {
  * A configured runner identity (a bot). The WHOLE block is optional — absent ⇒
  * fully ambient (today's behaviour, byte-for-byte). When present, `auth` is
  * MANDATORY (both transports stated); `name`/`email` default in; `providers` is
- * optional. HOST-ONLY: rejected in a per-repo `.dorfl.json` (it carries
+ * optional. HOST-ONLY: rejected in a per-repo `dorfl.json` (it carries
  * secrets and is per-machine), so it lives only in the global config.
  */
 export interface Identity {

package/src/install-ci.ts

@@ -300,11 +300,11 @@ export async function installCI(
 	log("CI autonomy is OFF by default (the engine's strict default).");
 	log(
 		'The emitted advance workflow sets NO DORFL_* gate env, so your\n' +
-			'  committed .dorfl.json wins (precedence: flag > env > per-repo > global > default).',
+			'  committed dorfl.json wins (precedence: flag > env > per-repo > global > default).',
 	);
 	log('To enable CI autonomy, EITHER:');
 	log(
-		'  - set the gate(s) in `.dorfl.json` (applies everywhere), e.g.\n' +
+		'  - set the gate(s) in `dorfl.json` (applies everywhere), e.g.\n' +
 			'      { "autoBuild": true, "autoTask": true }',
 	);
 	log(

package/src/intake-trigger-template.ts

@@ -295,9 +295,9 @@ env:
   # ── The engine GATE FAMILY, surfaced as the DORFL_* env block ─────────
   # CI is NOT a special policy surface (ADR ci-config-policy-and-gate-family §5):
   # it runs the SAME engine gates, resolved through flag > env > per-repo > global
-  # > default. The SAME .dorfl.json the laptop uses applies here; this env
+  # > default. The SAME dorfl.json the laptop uses applies here; this env
   # block is the optional CI-only override. Change behaviour by editing these
-  # values (or a GitHub repo variable / .dorfl.json key) — NOT by re-running
+  # values (or a GitHub repo variable / dorfl.json key) — NOT by re-running
   # install-ci (ADR §6: install-ci is one-time).
   #
   # \`intake\` itself is GATE-FREE (the explicit invocation is its own

package/src/lifecycle-pools.ts

@@ -116,7 +116,7 @@ export interface LifecyclePoolGates {
 	 *    `LifecyclePoolGates`. Placement acknowledged above; ratified as intentional
 	 *    so the gate colocates with its sibling create-side gates.
 	 * 4. **`surfaceStaging` in `REPO_ALLOWED_KEYS` is intentional** so a repo's
-	 *    `.dorfl.json` can flip it via the normal resolution chain.
+	 *    `dorfl.json` can flip it via the normal resolution chain.
 	 */
 	surfaceStaging?: boolean;
 }