docrev 0.9.13 → 0.9.14

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (126) hide show
  1. package/.claude/settings.local.json +9 -9
  2. package/.gitattributes +1 -1
  3. package/CHANGELOG.md +149 -149
  4. package/PLAN-tables-and-postprocess.md +850 -850
  5. package/README.md +391 -391
  6. package/bin/rev.js +11 -11
  7. package/bin/rev.ts +145 -145
  8. package/completions/rev.bash +127 -127
  9. package/completions/rev.ps1 +210 -210
  10. package/completions/rev.zsh +207 -207
  11. package/dev_notes/stress2/build_adversarial.ts +186 -186
  12. package/dev_notes/stress2/drift_matcher.ts +62 -62
  13. package/dev_notes/stress2/probe_anchors.ts +35 -35
  14. package/dev_notes/stress2/project/discussion.before.md +3 -3
  15. package/dev_notes/stress2/project/discussion.md +3 -3
  16. package/dev_notes/stress2/project/methods.before.md +20 -20
  17. package/dev_notes/stress2/project/methods.md +20 -20
  18. package/dev_notes/stress2/project/rev.yaml +5 -5
  19. package/dev_notes/stress2/project/sections.yaml +4 -4
  20. package/dev_notes/stress2/sections.yaml +5 -5
  21. package/dev_notes/stress2/trace_placement.ts +50 -50
  22. package/dev_notes/stresstest_boundaries.ts +27 -27
  23. package/dev_notes/stresstest_drift_apply.ts +43 -43
  24. package/dev_notes/stresstest_drift_compare.ts +43 -43
  25. package/dev_notes/stresstest_drift_v2.ts +54 -54
  26. package/dev_notes/stresstest_inspect.ts +54 -54
  27. package/dev_notes/stresstest_pstyle.ts +55 -55
  28. package/dev_notes/stresstest_section_debug.ts +23 -23
  29. package/dev_notes/stresstest_split.ts +70 -70
  30. package/dev_notes/stresstest_trace.ts +19 -19
  31. package/dev_notes/stresstest_verify_no_overwrite.ts +40 -40
  32. package/dist/lib/build.d.ts +38 -1
  33. package/dist/lib/build.d.ts.map +1 -1
  34. package/dist/lib/build.js +68 -30
  35. package/dist/lib/build.js.map +1 -1
  36. package/dist/lib/commands/build.d.ts.map +1 -1
  37. package/dist/lib/commands/build.js +38 -5
  38. package/dist/lib/commands/build.js.map +1 -1
  39. package/dist/lib/commands/utilities.js +164 -164
  40. package/dist/lib/commands/word-tools.js +8 -8
  41. package/dist/lib/grammar.js +3 -3
  42. package/dist/lib/pdf-comments.js +44 -44
  43. package/dist/lib/plugins.js +57 -57
  44. package/dist/lib/pptx-themes.js +115 -115
  45. package/dist/lib/spelling.js +2 -2
  46. package/dist/lib/templates.js +387 -387
  47. package/dist/lib/themes.js +51 -51
  48. package/eslint.config.js +27 -27
  49. package/lib/anchor-match.ts +276 -276
  50. package/lib/annotations.ts +644 -644
  51. package/lib/build.ts +1300 -1251
  52. package/lib/citations.ts +160 -160
  53. package/lib/commands/build.ts +833 -801
  54. package/lib/commands/citations.ts +515 -515
  55. package/lib/commands/comments.ts +1050 -1050
  56. package/lib/commands/context.ts +174 -174
  57. package/lib/commands/core.ts +309 -309
  58. package/lib/commands/doi.ts +435 -435
  59. package/lib/commands/file-ops.ts +372 -372
  60. package/lib/commands/history.ts +320 -320
  61. package/lib/commands/index.ts +87 -87
  62. package/lib/commands/init.ts +259 -259
  63. package/lib/commands/merge-resolve.ts +378 -378
  64. package/lib/commands/preview.ts +178 -178
  65. package/lib/commands/project-info.ts +244 -244
  66. package/lib/commands/quality.ts +517 -517
  67. package/lib/commands/response.ts +454 -454
  68. package/lib/commands/section-boundaries.ts +82 -82
  69. package/lib/commands/sections.ts +451 -451
  70. package/lib/commands/sync.ts +706 -706
  71. package/lib/commands/text-ops.ts +449 -449
  72. package/lib/commands/utilities.ts +448 -448
  73. package/lib/commands/verify-anchors.ts +272 -272
  74. package/lib/commands/word-tools.ts +340 -340
  75. package/lib/comment-realign.ts +517 -517
  76. package/lib/config.ts +84 -84
  77. package/lib/crossref.ts +781 -781
  78. package/lib/csl.ts +191 -191
  79. package/lib/dependencies.ts +98 -98
  80. package/lib/diff-engine.ts +465 -465
  81. package/lib/doi-cache.ts +115 -115
  82. package/lib/doi.ts +897 -897
  83. package/lib/equations.ts +506 -506
  84. package/lib/errors.ts +346 -346
  85. package/lib/format.ts +541 -541
  86. package/lib/git.ts +326 -326
  87. package/lib/grammar.ts +303 -303
  88. package/lib/image-registry.ts +180 -180
  89. package/lib/import.ts +911 -911
  90. package/lib/journals.ts +543 -543
  91. package/lib/merge.ts +633 -633
  92. package/lib/orcid.ts +144 -144
  93. package/lib/pdf-comments.ts +263 -263
  94. package/lib/pdf-import.ts +524 -524
  95. package/lib/plugins.ts +362 -362
  96. package/lib/postprocess.ts +188 -188
  97. package/lib/pptx-color-filter.lua +37 -37
  98. package/lib/pptx-template.ts +469 -469
  99. package/lib/pptx-themes.ts +483 -483
  100. package/lib/protect-restore.ts +520 -520
  101. package/lib/rate-limiter.ts +94 -94
  102. package/lib/response.ts +197 -197
  103. package/lib/restore-references.ts +240 -240
  104. package/lib/review.ts +327 -327
  105. package/lib/schema.ts +417 -417
  106. package/lib/scientific-words.ts +73 -73
  107. package/lib/sections.ts +335 -335
  108. package/lib/slides.ts +756 -756
  109. package/lib/spelling.ts +334 -334
  110. package/lib/templates.ts +526 -526
  111. package/lib/themes.ts +742 -742
  112. package/lib/trackchanges.ts +247 -247
  113. package/lib/tui.ts +450 -450
  114. package/lib/types.ts +550 -550
  115. package/lib/undo.ts +250 -250
  116. package/lib/utils.ts +69 -69
  117. package/lib/variables.ts +179 -179
  118. package/lib/word-extraction.ts +806 -806
  119. package/lib/word.ts +643 -643
  120. package/lib/wordcomments.ts +817 -817
  121. package/package.json +137 -137
  122. package/scripts/postbuild.js +28 -28
  123. package/skill/REFERENCE.md +431 -431
  124. package/skill/SKILL.md +258 -258
  125. package/tsconfig.json +26 -26
  126. package/types/index.d.ts +525 -525
@@ -1,372 +1,372 @@
1
- /**
2
- * File operation commands: backup, archive, export, clean
3
- *
4
- * Commands that create, move, or delete project files.
5
- */
6
-
7
- import type { Command } from 'commander';
8
- import {
9
- chalk,
10
- fs,
11
- path,
12
- fmt,
13
- findFiles,
14
- loadBuildConfig,
15
- } from './context.js';
16
-
17
- // Use the actual BuildConfig from build.ts which allows string|Author[]
18
- type BuildConfig = ReturnType<typeof loadBuildConfig>;
19
-
20
- interface ZipLike {
21
- addLocalFile(localPath: string, zipPath?: string): void;
22
- }
23
-
24
- /**
25
- * Recursively add directory contents to a zip archive, filtering by predicate
26
- */
27
- function addDirToZip(
28
- zip: ZipLike,
29
- dir: string,
30
- shouldInclude: (name: string) => boolean,
31
- zipPath = '',
32
- ): void {
33
- const entries = fs.readdirSync(dir, { withFileTypes: true });
34
- for (const entry of entries) {
35
- const fullPath = path.join(dir, entry.name);
36
- const entryZipPath = path.join(zipPath, entry.name);
37
-
38
- if (!shouldInclude(entry.name)) continue;
39
-
40
- if (entry.isDirectory()) {
41
- addDirToZip(zip, fullPath, shouldInclude, entryZipPath);
42
- } else {
43
- zip.addLocalFile(fullPath, zipPath || undefined);
44
- }
45
- }
46
- }
47
-
48
- // Options interfaces
49
- interface BackupOptions {
50
- name?: string;
51
- output?: string;
52
- }
53
-
54
- interface ArchiveOptions {
55
- dir?: string;
56
- by?: string;
57
- rename?: boolean;
58
- dryRun?: boolean;
59
- }
60
-
61
- interface ExportOptions {
62
- output?: string;
63
- includeOutput?: boolean;
64
- }
65
-
66
- interface CleanOptions {
67
- dryRun?: boolean;
68
- all?: boolean;
69
- }
70
-
71
- /**
72
- * Register file-ops commands with the program
73
- */
74
- export function register(program: Command): void {
75
- // ==========================================================================
76
- // BACKUP command - Timestamped project backup
77
- // ==========================================================================
78
-
79
- program
80
- .command('backup')
81
- .description('Create timestamped project backup')
82
- .option('-n, --name <name>', 'Custom backup name')
83
- .option('-o, --output <dir>', 'Output directory', '.')
84
- .action(async (options: BackupOptions) => {
85
- const { default: AdmZip } = await import('adm-zip');
86
- const zip = new AdmZip();
87
-
88
- const date = new Date().toISOString().slice(0, 10);
89
- const name = options.name || `backup-${date}`;
90
- const outputPath = path.join(options.output || '.', `${name}.zip`);
91
-
92
- // Files to exclude
93
- const excludePatterns = [
94
- 'node_modules', '.git', '.DS_Store', '*.zip',
95
- 'paper.md' // Generated file
96
- ];
97
-
98
- const shouldInclude = (file: string): boolean => {
99
- for (const pattern of excludePatterns) {
100
- if (file.includes(pattern.replace('*', ''))) return false;
101
- }
102
- return true;
103
- };
104
-
105
- addDirToZip(zip, '.', shouldInclude);
106
-
107
- zip.writeZip(outputPath);
108
- console.log(fmt.status('success', `Backup created: ${outputPath}`));
109
- });
110
-
111
- // ==========================================================================
112
- // ARCHIVE command - Archive reviewer docx files
113
- // ==========================================================================
114
-
115
- program
116
- .command('archive')
117
- .description('Move reviewer .docx files to archive folder')
118
- .argument('[files...]', 'Specific files to archive (default: all .docx)')
119
- .option('-d, --dir <folder>', 'Archive folder name', 'archive')
120
- .option('--by <name>', 'Reviewer name (auto-detected if single commenter)')
121
- .option('--no-rename', 'Keep original filenames')
122
- .option('--dry-run', 'Preview without moving files')
123
- .action(async (files: string[] | undefined, options: ArchiveOptions) => {
124
- const { extractWordComments } = await import('../import.js');
125
- const { default: YAML } = await import('yaml');
126
-
127
- // Find docx files to archive
128
- let docxFiles = files && files.length > 0
129
- ? files.filter(f => f.endsWith('.docx') && fs.existsSync(f))
130
- : findFiles('.docx');
131
-
132
- // Exclude our own build outputs
133
- let projectSlug: string | null = null;
134
- const configPath = path.join(process.cwd(), 'rev.yaml');
135
- if (fs.existsSync(configPath)) {
136
- try {
137
- const config = YAML.parse(fs.readFileSync(configPath, 'utf-8'));
138
- if (config.title) {
139
- projectSlug = config.title
140
- .toLowerCase()
141
- .replace(/[^a-z0-9]+/g, '-')
142
- .replace(/^-|-$/g, '')
143
- .slice(0, 50);
144
- }
145
- } catch (e) {
146
- // Ignore config errors
147
- }
148
- }
149
-
150
- // Filter out build outputs
151
- if (projectSlug && (!files || files.length === 0)) {
152
- const buildPatterns = [
153
- `${projectSlug}.docx`,
154
- `${projectSlug}_comments.docx`,
155
- `${projectSlug}-changes.docx`,
156
- 'paper.docx',
157
- 'paper_comments.docx',
158
- 'paper-changes.docx',
159
- ];
160
- const excluded: string[] = [];
161
- docxFiles = docxFiles.filter(f => {
162
- const base = path.basename(f).toLowerCase();
163
- const isBuilt = buildPatterns.includes(base);
164
- if (isBuilt) excluded.push(f);
165
- return !isBuilt;
166
- });
167
- if (excluded.length > 0) {
168
- console.log(chalk.dim(` Skipping build outputs: ${excluded.join(', ')}`));
169
- console.log();
170
- }
171
- }
172
-
173
- if (docxFiles.length === 0) {
174
- console.log(fmt.status('info', 'No .docx files to archive.'));
175
- return;
176
- }
177
-
178
- const projectTitle = projectSlug;
179
-
180
- // Create archive folder
181
- const archiveDir = path.resolve(options.dir || 'archive');
182
- if (!options.dryRun && !fs.existsSync(archiveDir)) {
183
- fs.mkdirSync(archiveDir, { recursive: true });
184
- }
185
-
186
- console.log(fmt.header('Archive'));
187
- console.log();
188
-
189
- const moved: string[] = [];
190
- for (const file of docxFiles) {
191
- const stat = fs.statSync(file);
192
- const mtime = stat.mtime;
193
- const timestamp = mtime.toISOString().slice(0, 19).replace(/[-:]/g, '').replace('T', '_');
194
-
195
- // Determine reviewer name
196
- let reviewer: string | null = options.by || null;
197
- if (!reviewer && options.rename !== false) {
198
- try {
199
- const comments = await extractWordComments(file);
200
- const authors = [...new Set(comments.map(c => c.author).filter(a => a && a !== 'Unknown'))];
201
- if (authors.length === 1) {
202
- reviewer = authors[0].replace(/[^a-zA-Z0-9]/g, '-').replace(/^-|-$/g, '');
203
- }
204
- } catch (e) {
205
- // Ignore extraction errors
206
- }
207
- }
208
-
209
- // Generate new name
210
- let newName: string;
211
- if (options.rename === false) {
212
- newName = path.basename(file);
213
- } else {
214
- const base = path.basename(file, '.docx');
215
- if (/^\d{8}_\d{6}_/.test(base)) {
216
- newName = path.basename(file);
217
- } else {
218
- const namePart = projectTitle || base;
219
- if (reviewer) {
220
- newName = `${timestamp}_${reviewer}_${namePart}.docx`;
221
- } else {
222
- newName = `${timestamp}_${namePart}.docx`;
223
- }
224
- }
225
- }
226
-
227
- const destPath = path.join(archiveDir, newName);
228
-
229
- if (options.dryRun) {
230
- console.log(` ${chalk.dim(file)} → ${chalk.cyan(path.join(options.dir || 'archive', newName))}`);
231
- } else {
232
- // Handle name collision
233
- let finalPath = destPath;
234
- let counter = 1;
235
- while (fs.existsSync(finalPath)) {
236
- const ext = path.extname(newName);
237
- const base = path.basename(newName, ext);
238
- finalPath = path.join(archiveDir, `${base}_${counter}${ext}`);
239
- counter++;
240
- }
241
- fs.renameSync(file, finalPath);
242
- console.log(` ${chalk.dim(file)} → ${chalk.green(path.relative(process.cwd(), finalPath))}`);
243
- }
244
- moved.push(file);
245
- }
246
-
247
- console.log();
248
- if (options.dryRun) {
249
- console.log(fmt.status('info', `Would archive ${moved.length} file(s). Run without --dry-run to proceed.`));
250
- } else {
251
- console.log(fmt.status('success', `Archived ${moved.length} file(s) to ${options.dir || 'archive'}/`));
252
- }
253
- });
254
-
255
- // ==========================================================================
256
- // EXPORT command - Export project as distributable zip
257
- // ==========================================================================
258
-
259
- program
260
- .command('export')
261
- .description('Export project as distributable zip')
262
- .option('-o, --output <file>', 'Output filename')
263
- .option('--include-output', 'Include built PDF/DOCX files')
264
- .action(async (options: ExportOptions) => {
265
- const { default: AdmZip } = await import('adm-zip');
266
- const { build } = await import('../build.js');
267
-
268
- let config: Partial<BuildConfig> = {};
269
- try {
270
- config = loadBuildConfig('.') || {};
271
- } catch {
272
- // Not in a rev project, that's ok
273
- }
274
-
275
- // Build first if including output
276
- if (options.includeOutput) {
277
- console.log(chalk.dim('Building documents...'));
278
- await build('.', ['pdf', 'docx']);
279
- }
280
-
281
- const zip = new AdmZip();
282
- const projectName = config.title?.replace(/[^a-zA-Z0-9]/g, '-').toLowerCase() || 'project';
283
- const outputPath = options.output || `${projectName}-export.zip`;
284
-
285
- const exclude = ['node_modules', '.git', '.DS_Store', '*.zip'];
286
-
287
- const shouldInclude = (name: string): boolean => {
288
- if (!options.includeOutput && (name.endsWith('.pdf') || name.endsWith('.docx'))) {
289
- return false;
290
- }
291
- for (const pattern of exclude) {
292
- if (name === pattern || name.includes(pattern.replace('*', ''))) return false;
293
- }
294
- return true;
295
- };
296
-
297
- addDirToZip(zip, '.', shouldInclude);
298
-
299
- zip.writeZip(outputPath);
300
- console.log(fmt.status('success', `Exported: ${outputPath}`));
301
- });
302
-
303
- // ==========================================================================
304
- // CLEAN command - Remove generated files
305
- // ==========================================================================
306
-
307
- program
308
- .command('clean')
309
- .description('Remove generated files (paper.md, PDFs, DOCXs)')
310
- .option('-n, --dry-run', 'Show what would be deleted without deleting')
311
- .option('--all', 'Also remove backup and export zips')
312
- .action((options: CleanOptions) => {
313
- let config: Partial<BuildConfig> = {};
314
- try {
315
- config = loadBuildConfig('.') || {};
316
- } catch {
317
- // Not in a rev project, that's ok
318
- }
319
-
320
- const projectName = config.title?.toLowerCase().replace(/\s+/g, '-') || 'paper';
321
-
322
- // Files to clean
323
- const patterns = [
324
- 'paper.md',
325
- '*.pdf',
326
- `${projectName}.docx`,
327
- `${projectName}.pdf`,
328
- `${projectName}.tex`,
329
- '.paper-*.md', // Temp build files
330
- ];
331
-
332
- if (options.all) {
333
- patterns.push('*.zip', 'backup-*.zip', '*-export.zip');
334
- }
335
-
336
- const toDelete: string[] = [];
337
-
338
- for (const pattern of patterns) {
339
- if (pattern.includes('*')) {
340
- const regex = new RegExp('^' + pattern.replace(/\./g, '\\.').replace(/\*/g, '.*') + '$');
341
- const files = fs.readdirSync('.').filter(f => regex.test(f));
342
- toDelete.push(...files);
343
- } else if (fs.existsSync(pattern)) {
344
- toDelete.push(pattern);
345
- }
346
- }
347
-
348
- if (toDelete.length === 0) {
349
- console.log(chalk.dim('No generated files to clean.'));
350
- return;
351
- }
352
-
353
- console.log(fmt.header('Clean'));
354
- console.log();
355
-
356
- for (const file of toDelete) {
357
- if (options.dryRun) {
358
- console.log(chalk.dim(` Would delete: ${file}`));
359
- } else {
360
- fs.unlinkSync(file);
361
- console.log(chalk.red(` Deleted: ${file}`));
362
- }
363
- }
364
-
365
- console.log();
366
- if (options.dryRun) {
367
- console.log(chalk.dim(`Would delete ${toDelete.length} file(s). Run without --dry-run to delete.`));
368
- } else {
369
- console.log(fmt.status('success', `Cleaned ${toDelete.length} file(s)`));
370
- }
371
- });
372
- }
1
+ /**
2
+ * File operation commands: backup, archive, export, clean
3
+ *
4
+ * Commands that create, move, or delete project files.
5
+ */
6
+
7
+ import type { Command } from 'commander';
8
+ import {
9
+ chalk,
10
+ fs,
11
+ path,
12
+ fmt,
13
+ findFiles,
14
+ loadBuildConfig,
15
+ } from './context.js';
16
+
17
+ // Use the actual BuildConfig from build.ts which allows string|Author[]
18
+ type BuildConfig = ReturnType<typeof loadBuildConfig>;
19
+
20
+ interface ZipLike {
21
+ addLocalFile(localPath: string, zipPath?: string): void;
22
+ }
23
+
24
+ /**
25
+ * Recursively add directory contents to a zip archive, filtering by predicate
26
+ */
27
+ function addDirToZip(
28
+ zip: ZipLike,
29
+ dir: string,
30
+ shouldInclude: (name: string) => boolean,
31
+ zipPath = '',
32
+ ): void {
33
+ const entries = fs.readdirSync(dir, { withFileTypes: true });
34
+ for (const entry of entries) {
35
+ const fullPath = path.join(dir, entry.name);
36
+ const entryZipPath = path.join(zipPath, entry.name);
37
+
38
+ if (!shouldInclude(entry.name)) continue;
39
+
40
+ if (entry.isDirectory()) {
41
+ addDirToZip(zip, fullPath, shouldInclude, entryZipPath);
42
+ } else {
43
+ zip.addLocalFile(fullPath, zipPath || undefined);
44
+ }
45
+ }
46
+ }
47
+
48
+ // Options interfaces
49
+ interface BackupOptions {
50
+ name?: string;
51
+ output?: string;
52
+ }
53
+
54
+ interface ArchiveOptions {
55
+ dir?: string;
56
+ by?: string;
57
+ rename?: boolean;
58
+ dryRun?: boolean;
59
+ }
60
+
61
+ interface ExportOptions {
62
+ output?: string;
63
+ includeOutput?: boolean;
64
+ }
65
+
66
+ interface CleanOptions {
67
+ dryRun?: boolean;
68
+ all?: boolean;
69
+ }
70
+
71
+ /**
72
+ * Register file-ops commands with the program
73
+ */
74
+ export function register(program: Command): void {
75
+ // ==========================================================================
76
+ // BACKUP command - Timestamped project backup
77
+ // ==========================================================================
78
+
79
+ program
80
+ .command('backup')
81
+ .description('Create timestamped project backup')
82
+ .option('-n, --name <name>', 'Custom backup name')
83
+ .option('-o, --output <dir>', 'Output directory', '.')
84
+ .action(async (options: BackupOptions) => {
85
+ const { default: AdmZip } = await import('adm-zip');
86
+ const zip = new AdmZip();
87
+
88
+ const date = new Date().toISOString().slice(0, 10);
89
+ const name = options.name || `backup-${date}`;
90
+ const outputPath = path.join(options.output || '.', `${name}.zip`);
91
+
92
+ // Files to exclude
93
+ const excludePatterns = [
94
+ 'node_modules', '.git', '.DS_Store', '*.zip',
95
+ 'paper.md' // Generated file
96
+ ];
97
+
98
+ const shouldInclude = (file: string): boolean => {
99
+ for (const pattern of excludePatterns) {
100
+ if (file.includes(pattern.replace('*', ''))) return false;
101
+ }
102
+ return true;
103
+ };
104
+
105
+ addDirToZip(zip, '.', shouldInclude);
106
+
107
+ zip.writeZip(outputPath);
108
+ console.log(fmt.status('success', `Backup created: ${outputPath}`));
109
+ });
110
+
111
+ // ==========================================================================
112
+ // ARCHIVE command - Archive reviewer docx files
113
+ // ==========================================================================
114
+
115
+ program
116
+ .command('archive')
117
+ .description('Move reviewer .docx files to archive folder')
118
+ .argument('[files...]', 'Specific files to archive (default: all .docx)')
119
+ .option('-d, --dir <folder>', 'Archive folder name', 'archive')
120
+ .option('--by <name>', 'Reviewer name (auto-detected if single commenter)')
121
+ .option('--no-rename', 'Keep original filenames')
122
+ .option('--dry-run', 'Preview without moving files')
123
+ .action(async (files: string[] | undefined, options: ArchiveOptions) => {
124
+ const { extractWordComments } = await import('../import.js');
125
+ const { default: YAML } = await import('yaml');
126
+
127
+ // Find docx files to archive
128
+ let docxFiles = files && files.length > 0
129
+ ? files.filter(f => f.endsWith('.docx') && fs.existsSync(f))
130
+ : findFiles('.docx');
131
+
132
+ // Exclude our own build outputs
133
+ let projectSlug: string | null = null;
134
+ const configPath = path.join(process.cwd(), 'rev.yaml');
135
+ if (fs.existsSync(configPath)) {
136
+ try {
137
+ const config = YAML.parse(fs.readFileSync(configPath, 'utf-8'));
138
+ if (config.title) {
139
+ projectSlug = config.title
140
+ .toLowerCase()
141
+ .replace(/[^a-z0-9]+/g, '-')
142
+ .replace(/^-|-$/g, '')
143
+ .slice(0, 50);
144
+ }
145
+ } catch (e) {
146
+ // Ignore config errors
147
+ }
148
+ }
149
+
150
+ // Filter out build outputs
151
+ if (projectSlug && (!files || files.length === 0)) {
152
+ const buildPatterns = [
153
+ `${projectSlug}.docx`,
154
+ `${projectSlug}_comments.docx`,
155
+ `${projectSlug}-changes.docx`,
156
+ 'paper.docx',
157
+ 'paper_comments.docx',
158
+ 'paper-changes.docx',
159
+ ];
160
+ const excluded: string[] = [];
161
+ docxFiles = docxFiles.filter(f => {
162
+ const base = path.basename(f).toLowerCase();
163
+ const isBuilt = buildPatterns.includes(base);
164
+ if (isBuilt) excluded.push(f);
165
+ return !isBuilt;
166
+ });
167
+ if (excluded.length > 0) {
168
+ console.log(chalk.dim(` Skipping build outputs: ${excluded.join(', ')}`));
169
+ console.log();
170
+ }
171
+ }
172
+
173
+ if (docxFiles.length === 0) {
174
+ console.log(fmt.status('info', 'No .docx files to archive.'));
175
+ return;
176
+ }
177
+
178
+ const projectTitle = projectSlug;
179
+
180
+ // Create archive folder
181
+ const archiveDir = path.resolve(options.dir || 'archive');
182
+ if (!options.dryRun && !fs.existsSync(archiveDir)) {
183
+ fs.mkdirSync(archiveDir, { recursive: true });
184
+ }
185
+
186
+ console.log(fmt.header('Archive'));
187
+ console.log();
188
+
189
+ const moved: string[] = [];
190
+ for (const file of docxFiles) {
191
+ const stat = fs.statSync(file);
192
+ const mtime = stat.mtime;
193
+ const timestamp = mtime.toISOString().slice(0, 19).replace(/[-:]/g, '').replace('T', '_');
194
+
195
+ // Determine reviewer name
196
+ let reviewer: string | null = options.by || null;
197
+ if (!reviewer && options.rename !== false) {
198
+ try {
199
+ const comments = await extractWordComments(file);
200
+ const authors = [...new Set(comments.map(c => c.author).filter(a => a && a !== 'Unknown'))];
201
+ if (authors.length === 1) {
202
+ reviewer = authors[0].replace(/[^a-zA-Z0-9]/g, '-').replace(/^-|-$/g, '');
203
+ }
204
+ } catch (e) {
205
+ // Ignore extraction errors
206
+ }
207
+ }
208
+
209
+ // Generate new name
210
+ let newName: string;
211
+ if (options.rename === false) {
212
+ newName = path.basename(file);
213
+ } else {
214
+ const base = path.basename(file, '.docx');
215
+ if (/^\d{8}_\d{6}_/.test(base)) {
216
+ newName = path.basename(file);
217
+ } else {
218
+ const namePart = projectTitle || base;
219
+ if (reviewer) {
220
+ newName = `${timestamp}_${reviewer}_${namePart}.docx`;
221
+ } else {
222
+ newName = `${timestamp}_${namePart}.docx`;
223
+ }
224
+ }
225
+ }
226
+
227
+ const destPath = path.join(archiveDir, newName);
228
+
229
+ if (options.dryRun) {
230
+ console.log(` ${chalk.dim(file)} → ${chalk.cyan(path.join(options.dir || 'archive', newName))}`);
231
+ } else {
232
+ // Handle name collision
233
+ let finalPath = destPath;
234
+ let counter = 1;
235
+ while (fs.existsSync(finalPath)) {
236
+ const ext = path.extname(newName);
237
+ const base = path.basename(newName, ext);
238
+ finalPath = path.join(archiveDir, `${base}_${counter}${ext}`);
239
+ counter++;
240
+ }
241
+ fs.renameSync(file, finalPath);
242
+ console.log(` ${chalk.dim(file)} → ${chalk.green(path.relative(process.cwd(), finalPath))}`);
243
+ }
244
+ moved.push(file);
245
+ }
246
+
247
+ console.log();
248
+ if (options.dryRun) {
249
+ console.log(fmt.status('info', `Would archive ${moved.length} file(s). Run without --dry-run to proceed.`));
250
+ } else {
251
+ console.log(fmt.status('success', `Archived ${moved.length} file(s) to ${options.dir || 'archive'}/`));
252
+ }
253
+ });
254
+
255
+ // ==========================================================================
256
+ // EXPORT command - Export project as distributable zip
257
+ // ==========================================================================
258
+
259
+ program
260
+ .command('export')
261
+ .description('Export project as distributable zip')
262
+ .option('-o, --output <file>', 'Output filename')
263
+ .option('--include-output', 'Include built PDF/DOCX files')
264
+ .action(async (options: ExportOptions) => {
265
+ const { default: AdmZip } = await import('adm-zip');
266
+ const { build } = await import('../build.js');
267
+
268
+ let config: Partial<BuildConfig> = {};
269
+ try {
270
+ config = loadBuildConfig('.') || {};
271
+ } catch {
272
+ // Not in a rev project, that's ok
273
+ }
274
+
275
+ // Build first if including output
276
+ if (options.includeOutput) {
277
+ console.log(chalk.dim('Building documents...'));
278
+ await build('.', ['pdf', 'docx']);
279
+ }
280
+
281
+ const zip = new AdmZip();
282
+ const projectName = config.title?.replace(/[^a-zA-Z0-9]/g, '-').toLowerCase() || 'project';
283
+ const outputPath = options.output || `${projectName}-export.zip`;
284
+
285
+ const exclude = ['node_modules', '.git', '.DS_Store', '*.zip'];
286
+
287
+ const shouldInclude = (name: string): boolean => {
288
+ if (!options.includeOutput && (name.endsWith('.pdf') || name.endsWith('.docx'))) {
289
+ return false;
290
+ }
291
+ for (const pattern of exclude) {
292
+ if (name === pattern || name.includes(pattern.replace('*', ''))) return false;
293
+ }
294
+ return true;
295
+ };
296
+
297
+ addDirToZip(zip, '.', shouldInclude);
298
+
299
+ zip.writeZip(outputPath);
300
+ console.log(fmt.status('success', `Exported: ${outputPath}`));
301
+ });
302
+
303
+ // ==========================================================================
304
+ // CLEAN command - Remove generated files
305
+ // ==========================================================================
306
+
307
+ program
308
+ .command('clean')
309
+ .description('Remove generated files (paper.md, PDFs, DOCXs)')
310
+ .option('-n, --dry-run', 'Show what would be deleted without deleting')
311
+ .option('--all', 'Also remove backup and export zips')
312
+ .action((options: CleanOptions) => {
313
+ let config: Partial<BuildConfig> = {};
314
+ try {
315
+ config = loadBuildConfig('.') || {};
316
+ } catch {
317
+ // Not in a rev project, that's ok
318
+ }
319
+
320
+ const projectName = config.title?.toLowerCase().replace(/\s+/g, '-') || 'paper';
321
+
322
+ // Files to clean
323
+ const patterns = [
324
+ 'paper.md',
325
+ '*.pdf',
326
+ `${projectName}.docx`,
327
+ `${projectName}.pdf`,
328
+ `${projectName}.tex`,
329
+ '.paper-*.md', // Temp build files
330
+ ];
331
+
332
+ if (options.all) {
333
+ patterns.push('*.zip', 'backup-*.zip', '*-export.zip');
334
+ }
335
+
336
+ const toDelete: string[] = [];
337
+
338
+ for (const pattern of patterns) {
339
+ if (pattern.includes('*')) {
340
+ const regex = new RegExp('^' + pattern.replace(/\./g, '\\.').replace(/\*/g, '.*') + '$');
341
+ const files = fs.readdirSync('.').filter(f => regex.test(f));
342
+ toDelete.push(...files);
343
+ } else if (fs.existsSync(pattern)) {
344
+ toDelete.push(pattern);
345
+ }
346
+ }
347
+
348
+ if (toDelete.length === 0) {
349
+ console.log(chalk.dim('No generated files to clean.'));
350
+ return;
351
+ }
352
+
353
+ console.log(fmt.header('Clean'));
354
+ console.log();
355
+
356
+ for (const file of toDelete) {
357
+ if (options.dryRun) {
358
+ console.log(chalk.dim(` Would delete: ${file}`));
359
+ } else {
360
+ fs.unlinkSync(file);
361
+ console.log(chalk.red(` Deleted: ${file}`));
362
+ }
363
+ }
364
+
365
+ console.log();
366
+ if (options.dryRun) {
367
+ console.log(chalk.dim(`Would delete ${toDelete.length} file(s). Run without --dry-run to delete.`));
368
+ } else {
369
+ console.log(fmt.status('success', `Cleaned ${toDelete.length} file(s)`));
370
+ }
371
+ });
372
+ }