docrev 0.11.2 → 0.12.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (205) hide show
  1. package/CHANGELOG.md +27 -0
  2. package/LICENSE +21 -0
  3. package/dist/bin/rev.js +29 -21
  4. package/dist/bin/rev.js.map +1 -1
  5. package/dist/lib/annotations.d.ts.map +1 -1
  6. package/dist/lib/annotations.js +28 -0
  7. package/dist/lib/annotations.js.map +1 -1
  8. package/dist/lib/build.d.ts +43 -0
  9. package/dist/lib/build.d.ts.map +1 -1
  10. package/dist/lib/build.js +175 -5
  11. package/dist/lib/build.js.map +1 -1
  12. package/dist/lib/commands/build.d.ts.map +1 -1
  13. package/dist/lib/commands/build.js +39 -125
  14. package/dist/lib/commands/build.js.map +1 -1
  15. package/dist/lib/commands/comments.d.ts.map +1 -1
  16. package/dist/lib/commands/comments.js +61 -31
  17. package/dist/lib/commands/comments.js.map +1 -1
  18. package/dist/lib/commands/context.d.ts +12 -0
  19. package/dist/lib/commands/context.d.ts.map +1 -1
  20. package/dist/lib/commands/context.js +34 -0
  21. package/dist/lib/commands/context.js.map +1 -1
  22. package/dist/lib/commands/core.d.ts.map +1 -1
  23. package/dist/lib/commands/core.js +25 -8
  24. package/dist/lib/commands/core.js.map +1 -1
  25. package/dist/lib/commands/merge-resolve.js +1 -1
  26. package/dist/lib/commands/merge-resolve.js.map +1 -1
  27. package/dist/lib/commands/quality.js +2 -2
  28. package/dist/lib/commands/quality.js.map +1 -1
  29. package/dist/lib/commands/response.js +1 -1
  30. package/dist/lib/commands/response.js.map +1 -1
  31. package/dist/lib/commands/sections.js +1 -1
  32. package/dist/lib/commands/sections.js.map +1 -1
  33. package/dist/lib/commands/text-ops.js +1 -1
  34. package/dist/lib/commands/text-ops.js.map +1 -1
  35. package/dist/lib/commands/utilities.d.ts.map +1 -1
  36. package/dist/lib/commands/utilities.js +5 -2
  37. package/dist/lib/commands/utilities.js.map +1 -1
  38. package/dist/lib/commands/word-tools.js +2 -2
  39. package/dist/lib/commands/word-tools.js.map +1 -1
  40. package/dist/lib/crossref.d.ts.map +1 -1
  41. package/dist/lib/crossref.js +12 -41
  42. package/dist/lib/crossref.js.map +1 -1
  43. package/dist/lib/csl.d.ts.map +1 -1
  44. package/dist/lib/csl.js +14 -22
  45. package/dist/lib/csl.js.map +1 -1
  46. package/dist/lib/diff-engine.js +1 -1
  47. package/dist/lib/diff-engine.js.map +1 -1
  48. package/dist/lib/equations.d.ts.map +1 -1
  49. package/dist/lib/equations.js +12 -3
  50. package/dist/lib/equations.js.map +1 -1
  51. package/dist/lib/errors.d.ts.map +1 -1
  52. package/dist/lib/errors.js +1 -30
  53. package/dist/lib/errors.js.map +1 -1
  54. package/dist/lib/image-registry.d.ts.map +1 -1
  55. package/dist/lib/image-registry.js +4 -0
  56. package/dist/lib/image-registry.js.map +1 -1
  57. package/dist/lib/import.d.ts +15 -1
  58. package/dist/lib/import.d.ts.map +1 -1
  59. package/dist/lib/import.js +24 -1
  60. package/dist/lib/import.js.map +1 -1
  61. package/dist/lib/input.d.ts +56 -0
  62. package/dist/lib/input.d.ts.map +1 -0
  63. package/dist/lib/input.js +129 -0
  64. package/dist/lib/input.js.map +1 -0
  65. package/dist/lib/merge.d.ts.map +1 -1
  66. package/dist/lib/merge.js +9 -1
  67. package/dist/lib/merge.js.map +1 -1
  68. package/dist/lib/ooxml.d.ts +22 -0
  69. package/dist/lib/ooxml.d.ts.map +1 -1
  70. package/dist/lib/ooxml.js +130 -0
  71. package/dist/lib/ooxml.js.map +1 -1
  72. package/dist/lib/orcid.d.ts.map +1 -1
  73. package/dist/lib/orcid.js +16 -7
  74. package/dist/lib/orcid.js.map +1 -1
  75. package/dist/lib/plugins.d.ts.map +1 -1
  76. package/dist/lib/plugins.js +8 -4
  77. package/dist/lib/plugins.js.map +1 -1
  78. package/dist/lib/protect-restore.d.ts.map +1 -1
  79. package/dist/lib/protect-restore.js +7 -5
  80. package/dist/lib/protect-restore.js.map +1 -1
  81. package/dist/lib/response.d.ts +1 -1
  82. package/dist/lib/response.d.ts.map +1 -1
  83. package/dist/lib/response.js +5 -2
  84. package/dist/lib/response.js.map +1 -1
  85. package/dist/lib/restore-references.d.ts.map +1 -1
  86. package/dist/lib/restore-references.js +25 -3
  87. package/dist/lib/restore-references.js.map +1 -1
  88. package/dist/lib/schema.d.ts.map +1 -1
  89. package/dist/lib/schema.js +1 -19
  90. package/dist/lib/schema.js.map +1 -1
  91. package/dist/lib/slides.js +1 -1
  92. package/dist/lib/slides.js.map +1 -1
  93. package/dist/lib/spelling.js +1 -1
  94. package/dist/lib/spelling.js.map +1 -1
  95. package/dist/lib/tui.js +0 -1
  96. package/dist/lib/tui.js.map +1 -1
  97. package/dist/lib/utils.d.ts +14 -0
  98. package/dist/lib/utils.d.ts.map +1 -1
  99. package/dist/lib/utils.js +41 -0
  100. package/dist/lib/utils.js.map +1 -1
  101. package/dist/lib/word-extraction.d.ts +5 -5
  102. package/dist/lib/word-extraction.d.ts.map +1 -1
  103. package/dist/lib/word-extraction.js +25 -106
  104. package/dist/lib/word-extraction.js.map +1 -1
  105. package/dist/lib/word.d.ts +14 -38
  106. package/dist/lib/word.d.ts.map +1 -1
  107. package/dist/lib/word.js +24 -179
  108. package/dist/lib/word.js.map +1 -1
  109. package/dist/lib/wordcomments.d.ts.map +1 -1
  110. package/dist/lib/wordcomments.js +9 -7
  111. package/dist/lib/wordcomments.js.map +1 -1
  112. package/package.json +17 -6
  113. package/.gitattributes +0 -1
  114. package/PLAN-tables-and-postprocess.md +0 -850
  115. package/bin/rev.ts +0 -145
  116. package/docs-src/build.py +0 -113
  117. package/docs-src/extra.css +0 -208
  118. package/docs-src/md-to-html.lua +0 -6
  119. package/docs-src/template.html +0 -116
  120. package/eslint.config.js +0 -27
  121. package/lib/anchor-match.ts +0 -307
  122. package/lib/annotations.ts +0 -664
  123. package/lib/build.ts +0 -2047
  124. package/lib/citations.ts +0 -160
  125. package/lib/commands/build.ts +0 -885
  126. package/lib/commands/citations.ts +0 -515
  127. package/lib/commands/comments.ts +0 -1050
  128. package/lib/commands/context.ts +0 -176
  129. package/lib/commands/core.ts +0 -309
  130. package/lib/commands/doi.ts +0 -451
  131. package/lib/commands/file-ops.ts +0 -372
  132. package/lib/commands/history.ts +0 -320
  133. package/lib/commands/index.ts +0 -87
  134. package/lib/commands/init.ts +0 -259
  135. package/lib/commands/merge-resolve.ts +0 -378
  136. package/lib/commands/preview.ts +0 -178
  137. package/lib/commands/project-info.ts +0 -244
  138. package/lib/commands/quality.ts +0 -517
  139. package/lib/commands/response.ts +0 -454
  140. package/lib/commands/section-boundaries.ts +0 -82
  141. package/lib/commands/sections.ts +0 -451
  142. package/lib/commands/sync.ts +0 -689
  143. package/lib/commands/text-ops.ts +0 -449
  144. package/lib/commands/utilities.ts +0 -448
  145. package/lib/commands/verify-anchors.ts +0 -272
  146. package/lib/commands/word-tools.ts +0 -340
  147. package/lib/comment-realign.ts +0 -99
  148. package/lib/config.ts +0 -84
  149. package/lib/crossref.ts +0 -781
  150. package/lib/csl.ts +0 -191
  151. package/lib/dependencies.ts +0 -132
  152. package/lib/diff-engine.ts +0 -465
  153. package/lib/doi-cache.ts +0 -115
  154. package/lib/doi.ts +0 -879
  155. package/lib/equations.ts +0 -506
  156. package/lib/errors.ts +0 -350
  157. package/lib/format.ts +0 -541
  158. package/lib/git.ts +0 -326
  159. package/lib/grammar.ts +0 -303
  160. package/lib/image-registry.ts +0 -180
  161. package/lib/import.ts +0 -906
  162. package/lib/journals.ts +0 -543
  163. package/lib/macro-filter.lua +0 -201
  164. package/lib/macros.ts +0 -273
  165. package/lib/merge.ts +0 -633
  166. package/lib/ooxml.ts +0 -768
  167. package/lib/orcid.ts +0 -144
  168. package/lib/pdf-comments.ts +0 -263
  169. package/lib/pdf-import.ts +0 -524
  170. package/lib/plugins.ts +0 -362
  171. package/lib/postprocess.ts +0 -188
  172. package/lib/pptx-color-filter.lua +0 -37
  173. package/lib/pptx-template.ts +0 -469
  174. package/lib/pptx-themes/academic.pptx +0 -0
  175. package/lib/pptx-themes/corporate.pptx +0 -0
  176. package/lib/pptx-themes/dark.pptx +0 -0
  177. package/lib/pptx-themes/default.pptx +0 -0
  178. package/lib/pptx-themes/minimal.pptx +0 -0
  179. package/lib/pptx-themes/plant.pptx +0 -0
  180. package/lib/pptx-themes.ts +0 -483
  181. package/lib/protect-restore.ts +0 -520
  182. package/lib/rate-limiter.ts +0 -127
  183. package/lib/response.ts +0 -197
  184. package/lib/restore-references.ts +0 -240
  185. package/lib/review.ts +0 -327
  186. package/lib/schema.ts +0 -494
  187. package/lib/scientific-words.ts +0 -73
  188. package/lib/sections.ts +0 -428
  189. package/lib/slides.ts +0 -756
  190. package/lib/spelling.ts +0 -334
  191. package/lib/templates.ts +0 -526
  192. package/lib/themes.ts +0 -742
  193. package/lib/trackchanges.ts +0 -166
  194. package/lib/tui.ts +0 -450
  195. package/lib/types.ts +0 -546
  196. package/lib/undo.ts +0 -250
  197. package/lib/utils.ts +0 -69
  198. package/lib/variables.ts +0 -179
  199. package/lib/word-extraction.ts +0 -525
  200. package/lib/word.ts +0 -526
  201. package/lib/wordcomments.ts +0 -789
  202. package/mkdocs.yml +0 -64
  203. package/scripts/postbuild.js +0 -47
  204. package/tsconfig.json +0 -26
  205. package/types/index.d.ts +0 -531
@@ -1,307 +0,0 @@
1
- /**
2
- * Anchor matching primitives shared between sync (insertion) and
3
- * verify-anchors (drift reporting). The functions are pure: given an
4
- * anchor string and surrounding context, locate candidate positions in
5
- * a target text using progressively looser strategies.
6
- */
7
-
8
- import { stripAnnotations } from './annotations.js';
9
-
10
- export type AnchorStrategy =
11
- | 'direct'
12
- | 'normalized'
13
- | 'stripped'
14
- | 'partial-start'
15
- | 'partial-start-stripped'
16
- | 'partial-window'
17
- | 'partial-window-stripped'
18
- | 'context-both'
19
- | 'context-before'
20
- | 'context-after'
21
- | 'split-match'
22
- | 'empty-anchor'
23
- | 'failed';
24
-
25
- export interface AnchorSearchResult {
26
- occurrences: number[];
27
- matchedAnchor: string | null;
28
- strategy: AnchorStrategy;
29
- stripped?: boolean;
30
- }
31
-
32
- /**
33
- * Strip CriticMarkup so the matcher sees plain prose instead of
34
- * `{++inserted++}`/`{--deleted--}`/etc. Used when an anchor lives
35
- * underneath previously imported track changes. Delegates to the single
36
- * annotation stripper so the matcher and the build path resolve markup the
37
- * same way — a payload containing `+`, `-`, or `~` is handled correctly.
38
- */
39
- export function stripCriticMarkup(text: string): string {
40
- return stripAnnotations(text);
41
- }
42
-
43
- /**
44
- * Return every starting index where `needle` occurs in `haystack`.
45
- * Empty needles return no occurrences (empty matches are not useful
46
- * for anchor placement).
47
- */
48
- /**
49
- * Score how well the docx-side `before` / `after` context matches the
50
- * surroundings of a candidate position in the target text. Used by
51
- * `verify-anchors` to tell apart "multiple hits but context picks one
52
- * cleanly" (sync will place it correctly) from "multiple hits, context
53
- * doesn't help" (truly ambiguous, needs human placement).
54
- *
55
- * Returns 0 if no context was provided.
56
- */
57
- export function scoreContextAt(
58
- pos: number,
59
- text: string,
60
- before: string,
61
- after: string,
62
- anchorLen: number,
63
- ): number {
64
- let score = 0;
65
- if (before) {
66
- const contextBefore = text.slice(Math.max(0, pos - before.length - 20), pos).toLowerCase();
67
- const beforeLower = before.toLowerCase();
68
- const beforeWords = beforeLower.split(/\s+/).filter(w => w.length > 3);
69
- for (const word of beforeWords) {
70
- if (contextBefore.includes(word)) score += 2;
71
- }
72
- if (contextBefore.includes(beforeLower.slice(-30))) score += 5;
73
- }
74
- if (after) {
75
- const contextAfter = text.slice(pos + anchorLen, pos + anchorLen + after.length + 20).toLowerCase();
76
- const afterLower = after.toLowerCase();
77
- const afterWords = afterLower.split(/\s+/).filter(w => w.length > 3);
78
- for (const word of afterWords) {
79
- if (contextAfter.includes(word)) score += 2;
80
- }
81
- if (contextAfter.includes(afterLower.slice(0, 30))) score += 5;
82
- }
83
- return score;
84
- }
85
-
86
- export function findAllOccurrences(haystack: string, needle: string): number[] {
87
- if (!needle || needle.length === 0) return [];
88
- const occurrences: number[] = [];
89
- let idx = 0;
90
- while ((idx = haystack.indexOf(needle, idx)) !== -1) {
91
- occurrences.push(idx);
92
- idx += 1;
93
- }
94
- return occurrences;
95
- }
96
-
97
- /**
98
- * Find candidate positions for `anchor` in `text`, falling back through
99
- * progressively looser strategies (whitespace normalization, stripped
100
- * CriticMarkup, partial-prefix, surrounding context, word splitting).
101
- *
102
- * The returned `strategy` lets callers distinguish a clean direct hit
103
- * from a fuzzy approximation — useful for drift reporting.
104
- */
105
- export function findAnchorInText(
106
- anchor: string,
107
- text: string,
108
- before: string = '',
109
- after: string = ''
110
- ): AnchorSearchResult {
111
- // Empty anchor: skip directly to context-based matching
112
- if (!anchor || anchor.trim().length === 0) {
113
- if (before || after) {
114
- const beforeLower = (before || '').toLowerCase();
115
- const afterLower = (after || '').toLowerCase();
116
- const textLower = text.toLowerCase();
117
-
118
- if (before && after) {
119
- const beforeIdx = textLower.indexOf(beforeLower.slice(-50));
120
- if (beforeIdx !== -1) {
121
- const searchStart = beforeIdx + beforeLower.slice(-50).length;
122
- const afterIdx = textLower.indexOf(afterLower.slice(0, 50), searchStart);
123
- if (afterIdx !== -1 && afterIdx - searchStart < 500) {
124
- return { occurrences: [searchStart], matchedAnchor: null, strategy: 'context-both' };
125
- }
126
- }
127
- }
128
-
129
- if (before) {
130
- const beforeIdx = textLower.lastIndexOf(beforeLower.slice(-30));
131
- if (beforeIdx !== -1) {
132
- return {
133
- occurrences: [beforeIdx + beforeLower.slice(-30).length],
134
- matchedAnchor: null,
135
- strategy: 'context-before',
136
- };
137
- }
138
- }
139
-
140
- if (after) {
141
- const afterIdx = textLower.indexOf(afterLower.slice(0, 30));
142
- if (afterIdx !== -1) {
143
- return { occurrences: [afterIdx], matchedAnchor: null, strategy: 'context-after' };
144
- }
145
- }
146
- }
147
- return { occurrences: [], matchedAnchor: null, strategy: 'empty-anchor' };
148
- }
149
-
150
- const anchorLower = anchor.toLowerCase();
151
- const textLower = text.toLowerCase();
152
-
153
- // Strategy 1: direct match
154
- let occurrences = findAllOccurrences(textLower, anchorLower);
155
- if (occurrences.length > 0) {
156
- return { occurrences, matchedAnchor: anchor, strategy: 'direct' };
157
- }
158
-
159
- // Strategy 2: normalized whitespace
160
- const normalizedAnchor = anchor.replace(/\s+/g, ' ').toLowerCase();
161
- const normalizedText = text.replace(/\s+/g, ' ').toLowerCase();
162
- const idx = normalizedText.indexOf(normalizedAnchor);
163
- if (idx !== -1) {
164
- return { occurrences: [idx], matchedAnchor: anchor, strategy: 'normalized' };
165
- }
166
-
167
- // Strategy 3: match in stripped CriticMarkup version
168
- const strippedText = stripCriticMarkup(text);
169
- const strippedLower = strippedText.toLowerCase();
170
- occurrences = findAllOccurrences(strippedLower, anchorLower);
171
- if (occurrences.length > 0) {
172
- return { occurrences, matchedAnchor: anchor, strategy: 'stripped', stripped: true };
173
- }
174
-
175
- // Strategy 4: word window from anchor (prefix or interior).
176
- // Sliding the window across the anchor catches the case where the
177
- // anchor's prefix has been edited but a chunk in the middle/end
178
- // survived intact (e.g. "Sensitivity analyses were performed by
179
- // perturbing the prior variance" → drifted "Sensitivity analyses
180
- // perturbed the prior variance" still contains "the prior variance").
181
- const words = anchor.split(/\s+/);
182
- if (words.length > 3) {
183
- for (let n = Math.min(6, words.length); n >= 3; n--) {
184
- for (let start = 0; start + n <= words.length; start++) {
185
- const window = words.slice(start, start + n).join(' ');
186
- const windowLower = window.toLowerCase();
187
- if (windowLower.length < 15) continue;
188
-
189
- let occ = findAllOccurrences(textLower, windowLower);
190
- if (occ.length > 0) {
191
- const strategy: AnchorStrategy = start === 0 ? 'partial-start' : 'partial-window';
192
- return { occurrences: occ, matchedAnchor: window, strategy };
193
- }
194
- occ = findAllOccurrences(strippedLower, windowLower);
195
- if (occ.length > 0) {
196
- const strategy: AnchorStrategy = start === 0 ? 'partial-start-stripped' : 'partial-window-stripped';
197
- return { occurrences: occ, matchedAnchor: window, strategy, stripped: true };
198
- }
199
- }
200
- }
201
- }
202
-
203
- // Strategy 5: context (before/after) only.
204
- //
205
- // For a non-empty anchor that already failed every text-based strategy
206
- // above, we treat context as a degraded placement: classify it
207
- // 'context-only' so callers can warn the user. We also reject
208
- // implausible brackets — if both contexts match but the gap between
209
- // them is far too small to contain the anchor (e.g. the anchored
210
- // sentence was deleted), do not silently land the comment between
211
- // the surviving sentences. Return 'failed' so the user is told to
212
- // place it manually.
213
- if (before || after) {
214
- const beforeLower = before.toLowerCase();
215
- const afterLower = after.toLowerCase();
216
- const anchorLen = anchor.length;
217
-
218
- if (before && after) {
219
- const beforeIdx = textLower.indexOf(beforeLower.slice(-50));
220
- if (beforeIdx !== -1) {
221
- const searchStart = beforeIdx + beforeLower.slice(-50).length;
222
- const afterIdx = textLower.indexOf(afterLower.slice(0, 50), searchStart);
223
- if (afterIdx !== -1) {
224
- const gap = afterIdx - searchStart;
225
- // Require the bracket to plausibly contain a remnant of the anchor.
226
- // Below 30% of anchor length: anchor was deleted — refuse to place.
227
- // Above 2× anchor length + slack: brackets are too far apart, the
228
- // matcher has latched onto unrelated repeats of common context.
229
- const minGap = Math.floor(anchorLen * 0.3);
230
- const maxGap = Math.min(500, anchorLen * 2 + 50);
231
- if (gap >= minGap && gap <= maxGap) {
232
- return { occurrences: [searchStart], matchedAnchor: null, strategy: 'context-both' };
233
- }
234
- // Both brackets found but gap implausible: anchor likely deleted.
235
- // Don't fall back to single-side context — that would silently
236
- // place the comment in the wrong location.
237
- return { occurrences: [], matchedAnchor: null, strategy: 'failed' };
238
- }
239
- }
240
- }
241
-
242
- if (before) {
243
- const beforeIdx = textLower.lastIndexOf(beforeLower.slice(-30));
244
- if (beforeIdx !== -1) {
245
- return {
246
- occurrences: [beforeIdx + beforeLower.slice(-30).length],
247
- matchedAnchor: null,
248
- strategy: 'context-before',
249
- };
250
- }
251
- }
252
-
253
- if (after) {
254
- const afterIdx = textLower.indexOf(afterLower.slice(0, 30));
255
- if (afterIdx !== -1) {
256
- return { occurrences: [afterIdx], matchedAnchor: null, strategy: 'context-after' };
257
- }
258
- }
259
- }
260
-
261
- // Strategy 6: split anchor on transition characters
262
- const splitPatterns = [' ', ', ', '. ', ' - ', ' – '];
263
- for (const sep of splitPatterns) {
264
- if (anchor.includes(sep)) {
265
- const parts = anchor.split(sep).filter(p => p.length >= 4);
266
- for (const part of parts) {
267
- const partLower = part.toLowerCase();
268
- occurrences = findAllOccurrences(textLower, partLower);
269
- if (occurrences.length > 0 && occurrences.length < 5) {
270
- return { occurrences, matchedAnchor: part, strategy: 'split-match' };
271
- }
272
- }
273
- }
274
- }
275
-
276
- return { occurrences: [], matchedAnchor: null, strategy: 'failed' };
277
- }
278
-
279
- /**
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- * Classify a strategy as a clean hit, a fuzzy/drifted hit, or no hit.
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- * Used by `verify-anchors` to summarize per-comment match quality.
282
- */
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- export type AnchorMatchQuality = 'clean' | 'drift' | 'context-only' | 'unmatched';
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-
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- export function classifyStrategy(strategy: AnchorStrategy, occurrences: number): AnchorMatchQuality {
286
- if (occurrences === 0) return 'unmatched';
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- switch (strategy) {
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- case 'direct':
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- case 'normalized':
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- return 'clean';
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- case 'stripped':
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- case 'partial-start':
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- case 'partial-start-stripped':
294
- case 'partial-window':
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- case 'partial-window-stripped':
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- case 'split-match':
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- return 'drift';
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- case 'context-both':
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- case 'context-before':
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- case 'context-after':
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- return 'context-only';
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- case 'empty-anchor':
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- case 'failed':
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- default:
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- return 'unmatched';
306
- }
307
- }