directory-indexer 0.0.15 → 0.1.0

package/dist/cli.js

@@ -4,7 +4,7 @@ import { fileURLToPath } from "url";
 import { readFileSync } from "fs";
 import { dirname, join } from "path";
 import { indexDirectories } from "./indexing.js";
-import { getFileContent, findSimilarFiles, searchContent } from "./search.js";
+import { getChunkContent, getFileContent, findSimilarFiles, searchContent } from "./search.js";
 import { loadConfig } from "./config.js";
 import { getIndexStatus } from "./storage.js";
 import { Server } from "@modelcontextprotocol/sdk/server/index.js";
@@ -17,13 +17,31 @@ const VERSION$1 = packageJson$1.version;
 const MCP_TOOLS = [
   {
     name: "index",
-    description: "Index directories for semantic search",
+    description: `Index directories to make their files searchable. Processes files to create vector embeddings for semantic search.
+
+When to use this tool:
+- User specifically requests indexing a directory as a knowledge base
+- Adding new documentation, code repositories, or file collections to search
+- Updating index when many files have changed
+
+How it works:
+- Recursively scans directories for supported file types
+- Extracts text content and splits into chunks
+- Generates vector embeddings for semantic similarity
+- Stores in database for fast retrieval
+
+Examples:
+- Index documentation: "/home/user/docs/project-wiki"
+- Index codebase: "/home/user/projects/api-server"
+- Index multiple directories: "/home/user/docs,/home/user/configs"
+
+Indexing can take several minutes for large directories. Most users will already have directories indexed and can directly use search tool. Use server_info to check current indexing status first.`,
     inputSchema: {
       type: "object",
       properties: {
         directory_path: {
           type: "string",
-          description: "Comma-separated list of directory paths to index"
+          description: 'Comma-separated list of absolute directory paths to index. Must be absolute paths since MCP server runs independently. Examples: "/home/user/projects" (Unix) or "C:\\Users\\user\\projects" (Windows)'
         }
       },
       required: ["directory_path"]
@@ -31,17 +49,50 @@ const MCP_TOOLS = [
   },
   {
     name: "search",
-    description: "Search indexed content semantically",
+    description: `Search indexed files using natural language queries. Finds files containing content semantically similar to the query.
+
+When to use this tool:
+- Find documentation, guides, or explanations about specific topics
+- Locate code files implementing certain functionality or patterns
+- Discover configuration files, scripts, or settings related to a topic
+- Search for files covering specific concepts or technologies
+
+How it works:
+- Converts query to vector embedding using semantic similarity
+- Searches all indexed file chunks for relevant content
+- Groups results by file and calculates average relevance scores
+- Returns files ranked by relevance score
+
+Examples:
+- "database configuration" - finds config files, documentation about DB setup
+- "error handling patterns" - finds code files with exception handling
+- "authentication implementation" - finds auth-related code and docs
+- "API documentation" - finds API guides, endpoint definitions
+- "deployment scripts" - finds CI/CD configs, deployment automation
+
+Returns files with similarity scores and chunk information. Use get_content to retrieve full file content or get_chunk to retrieve specific chunk content by chunk ID.
+- Groups results by file to avoid duplicates from multiple matching sections
+
+Response format:
+- Returns lightweight metadata including file paths, relevance scores, and chunk IDs
+- Use 'get_chunk' or 'get_content' tools to fetch actual content from search results
+- Chunks are sorted by relevance score within each file
+- Average similarity score calculated across all matching chunks per file
+
+Example queries:
+- "error handling patterns" (finds try/catch, error classes, logging)
+- "database migration scripts" (finds SQL, schema changes, migration files)
+- "authentication middleware" (finds auth logic, JWT handling, middleware functions)`,
     inputSchema: {
       type: "object",
       properties: {
         query: {
           type: "string",
-          description: "Search query"
+          description: "Natural language search query describing what you are looking for. Can be concepts, functionality, or specific technical terms."
         },
         limit: {
           type: "number",
-          description: "Maximum number of results (default: 10)",
+          description: "Maximum number of files to return (default: 10). Each file may contain multiple matching chunks.",
           default: 10
         }
       },
@@ -50,17 +101,36 @@ const MCP_TOOLS = [
   },
   {
     name: "similar_files",
-    description: "Find files similar to a given file",
+    description: `Find files with content similar to a reference file. Uses semantic similarity to find related documents, code files, or any text content.
+
+When to use this tool:
+- Find documentation similar to a specific guide or README
+- Locate related code files, configuration files, or scripts
+- Discover alternative implementations or approaches
+- Find files covering similar topics or concepts
+
+How it works:
+- Analyzes the semantic content of the reference file
+- Compares against all indexed files using vector similarity
+- Returns files ranked by content similarity score
+
+Examples:
+- Given "deployment-guide.md" - finds other deployment docs, CI/CD guides, infrastructure setup
+- Given "troubleshooting.md" - finds other troubleshooting guides, FAQ files, error documentation
+- Given "config.yaml" - finds other configuration files, settings, environment setups
+- Given "auth.py" - finds other authentication modules, security code, middleware
+
+Returns file paths with similarity scores. Use get_content to read full files or get_chunk for specific sections.`,
     inputSchema: {
       type: "object",
       properties: {
         file_path: {
           type: "string",
-          description: "Path to the file to find similar files for"
+          description: "Absolute or relative path to the reference file. This file must have been previously indexed."
         },
         limit: {
           type: "number",
-          description: "Maximum number of results (default: 10)",
+          description: "Maximum number of similar files to return (default: 10). Results are sorted by similarity score.",
           default: 10
         }
       },
@@ -69,28 +139,104 @@ const MCP_TOOLS = [
   },
   {
     name: "get_content",
-    description: "Get file content",
+    description: `Retrieve the full content of a file or specific chunks. Reads files directly from the filesystem.
+
+When to use this tool:
+- Get complete file content after finding files through search
+- Read documentation, code files, or configuration files for analysis
+- Extract specific sections of large files using chunk ranges
+- Access any text-based file content
+
+How it works:
+- Reads files directly from filesystem (not from search index)
+- Returns entire file by default
+- Can return specific chunk ranges for indexed files
+- Preserves original formatting and content
+
+Examples:
+- Get full file: file_path="/home/user/docs/api.md"
+- Get specific chunks: file_path="/home/user/code/main.py", chunks="2-5"
+- Get single chunk: file_path="/home/user/config.json", chunks="1"
+
+Returns file content as text. Use this after search or similar_files to read actual content.`,
     inputSchema: {
       type: "object",
       properties: {
         file_path: {
           type: "string",
-          description: "Path to the file to retrieve"
+          description: "Absolute or relative path to the file to retrieve. File must be readable and text-based."
         },
         chunks: {
           type: "string",
-          description: 'Optional chunk range (e.g., "2-5")'
+          description: 'Optional chunk range specification. Examples: "3" (single chunk), "2-5" (chunks 2 through 5), "1-3" (first three chunks). Only works for indexed files.'
         }
       },
       required: ["file_path"]
     }
   },
+  {
+    name: "get_chunk",
+    description: `Retrieve content of a specific chunk from an indexed file. Gets exact text segments identified during search.
+
+When to use this tool:
+- Get specific relevant sections after performing a search
+- Access only the most pertinent parts of large files
+- Retrieve content from high-scoring chunks identified in search results
+- Avoid reading entire files when only specific sections are needed
+
+How it works:
+- Files are split into overlapping text chunks during indexing
+- Each chunk has a sequential ID ("0", "1", "2", etc.)
+- Search results include chunk IDs for relevant sections
+- Returns the exact content that was semantically matched
+
+Examples:
+- After search returns chunk "3" from "api-docs.md" with high score
+- Get chunk content: file_path="/docs/api-docs.md", chunk_id="3"
+- Returns the specific text segment that matched your query
+
+Returns chunk content as text. Use this with chunk IDs from search results to get precise content sections.`,
+    inputSchema: {
+      type: "object",
+      properties: {
+        file_path: {
+          type: "string",
+          description: "Absolute or relative path to the indexed file containing the desired chunk."
+        },
+        chunk_id: {
+          type: "string",
+          description: 'ID of the specific chunk to retrieve. This is typically obtained from search results and is a sequential string like "0", "1", "2", etc.'
+        }
+      },
+      required: ["file_path", "chunk_id"]
+    }
+  },
   {
     name: "server_info",
-    description: "Get server information and status",
+    description: `Get information about server status and indexed content. Shows what directories and files are available for search.
+
+When to use this tool:
+- Check what content is already indexed before performing searches
+- Verify system is working properly
+- See indexing statistics and status
+- Understand scope of available searchable content
+
+How it works:
+- Reports total indexed directories, files, and chunks
+- Shows database size and last indexing time
+- Lists all indexed directories with file counts
+- Reports any errors or issues
+
+Examples:
+- Check before searching: "What content is indexed?"
+- Verify after indexing: "Did the indexing complete successfully?"
+- Monitor system: "How many files are searchable?"
+
+Returns server version, indexing statistics, directory list, and any errors. Use this to understand what content is available for search and similar_files tools.`,
     inputSchema: {
       type: "object",
-      properties: {}
+      properties: {},
+      additionalProperties: false
     }
   }
 ];
@@ -172,6 +318,20 @@ async function startMcpServer(config) {
             ]
           };
         }
+        case "get_chunk": {
+          if (!args || typeof args.file_path !== "string" || typeof args.chunk_id !== "string") {
+            throw new Error("file_path and chunk_id are required");
+          }
+          const content = await getChunkContent(args.file_path, args.chunk_id);
+          return {
+            content: [
+              {
+                type: "text",
+                text: content
+              }
+            ]
+          };
+        }
         case "server_info": {
           const status = await getIndexStatus();
           return {
@@ -219,7 +379,7 @@ async function main() {
   program.command("index").description("Index directories for semantic search").argument("<paths...>", "Directory paths to index").option("-v, --verbose", "Enable verbose logging").action(async (paths, options) => {
     try {
       const config = await loadConfig({ verbose: options.verbose });
-      console.log(`Indexing ${paths.length} directories...`);
+      console.log(`Indexing ${paths.length} ${paths.length === 1 ? "directory" : "directories"}: ${paths.join(", ")}`);
       const result = await indexDirectories(paths, config);
       console.log(`Indexed ${result.indexed} files, skipped ${result.skipped} files, ${result.errors.length} errors`);
       if (result.errors.length > 0 && config.verbose) {
@@ -230,7 +390,7 @@ async function main() {
       process.exit(1);
     }
   });
-  program.command("search").description("Search indexed content semantically").argument("<query>", "Search query").option("-l, --limit <number>", "Maximum number of results", "10").option("-v, --verbose", "Enable verbose logging").action(async (query, options) => {
+  program.command("search").description("Search indexed content semantically").argument("<query>", "Search query").option("-l, --limit <number>", "Maximum number of results", "10").option("-c, --show-chunks", "Show individual chunk scores and IDs").option("-v, --verbose", "Enable verbose logging").action(async (query, options) => {
     try {
       await loadConfig({ verbose: options.verbose });
       const results = await searchContent(query, { limit: parseInt(options.limit) });
@@ -242,9 +402,12 @@ async function main() {
 `);
       results.forEach((result, index) => {
         console.log(`${index + 1}. ${result.filePath}`);
-        console.log(`   Score: ${result.score.toFixed(3)}`);
-        if (result.content) {
-          console.log(`   Content: ${result.content.substring(0, 150)}...`);
+        console.log(`   Score: ${result.score.toFixed(3)} (${result.matchingChunks} chunks)`);
+        if (options.showChunks && result.chunks.length > 0) {
+          console.log(`   Chunks:`);
+          result.chunks.forEach((chunk) => {
+            console.log(`     - Chunk ${chunk.chunkId}: ${chunk.score.toFixed(3)}`);
+          });
         }
         console.log();
       });

package/dist/cli.js.map

@@ -1 +1 @@
-{"version":3,"file":"cli.js","sources":["../src/mcp.ts","../src/cli.ts"],"sourcesContent":["import { Server } from '@modelcontextprotocol/sdk/server/index.js';\nimport { StdioServerTransport } from '@modelcontextprotocol/sdk/server/stdio.js';\nimport { \n  CallToolRequestSchema, \n  ListToolsRequestSchema,\n  Tool\n} from '@modelcontextprotocol/sdk/types.js';\nimport { readFileSync } from 'fs';\nimport { join, dirname } from 'path';\nimport { fileURLToPath } from 'url';\nimport { Config } from './config.js';\nimport { indexDirectories } from './indexing.js';\nimport { searchContent, findSimilarFiles, getFileContent } from './search.js';\nimport { getIndexStatus } from './storage.js';\n\n// Read version from package.json\nconst __dirname = dirname(fileURLToPath(import.meta.url));\nconst packageJsonPath = join(__dirname, '../package.json');\nconst packageJson = JSON.parse(readFileSync(packageJsonPath, 'utf-8'));\nconst VERSION = packageJson.version;\n\nconst MCP_TOOLS: Tool[] = [\n  {\n    name: 'index',\n    description: 'Index directories for semantic search',\n    inputSchema: {\n      type: 'object',\n      properties: {\n        directory_path: {\n          type: 'string',\n          description: 'Comma-separated list of directory paths to index'\n        }\n      },\n      required: ['directory_path']\n    }\n  },\n  {\n    name: 'search',\n    description: 'Search indexed content semantically',\n    inputSchema: {\n      type: 'object',\n      properties: {\n        query: {\n          type: 'string',\n          description: 'Search query'\n        },\n        limit: {\n          type: 'number',\n          description: 'Maximum number of results (default: 10)',\n          default: 10\n        }\n      },\n      required: ['query']\n    }\n  },\n  {\n    name: 'similar_files',\n    description: 'Find files similar to a given file',\n    inputSchema: {\n      type: 'object',\n      properties: {\n        file_path: {\n          type: 'string',\n          description: 'Path to the file to find similar files for'\n        },\n        limit: {\n          type: 'number',\n          description: 'Maximum number of results (default: 10)',\n          default: 10\n        }\n      },\n      required: ['file_path']\n    }\n  },\n  {\n    name: 'get_content',\n    description: 'Get file content',\n    inputSchema: {\n      type: 'object',\n      properties: {\n        file_path: {\n          type: 'string',\n          description: 'Path to the file to retrieve'\n        },\n        chunks: {\n          type: 'string',\n          description: 'Optional chunk range (e.g., \"2-5\")'\n        }\n      },\n      required: ['file_path']\n    }\n  },\n  {\n    name: 'server_info',\n    description: 'Get server information and status',\n    inputSchema: {\n      type: 'object',\n      properties: {}\n    }\n  }\n];\n\nexport async function startMcpServer(config: Config): Promise<void> {\n  const server = new Server(\n    {\n      name: 'directory-indexer',\n      version: VERSION\n    },\n    {\n      capabilities: {\n        tools: {}\n      }\n    }\n  );\n\n  server.setRequestHandler(ListToolsRequestSchema, async () => {\n    return {\n      tools: MCP_TOOLS\n    };\n  });\n\n  server.setRequestHandler(CallToolRequestSchema, async (request) => {\n    const { name, arguments: args } = request.params;\n\n    try {\n      switch (name) {\n        case 'index': {\n          if (!args || typeof args.directory_path !== 'string') {\n            throw new Error('directory_path is required');\n          }\n          const paths = args.directory_path.split(',').map((p: string) => p.trim());\n          const result = await indexDirectories(paths, config);\n          return {\n            content: [\n              {\n                type: 'text',\n                text: `Indexed ${result.indexed} files, skipped ${result.skipped} files, ${result.errors.length} errors`\n              }\n            ]\n          };\n        }\n\n        case 'search': {\n          if (!args || typeof args.query !== 'string') {\n            throw new Error('query is required');\n          }\n          const results = await searchContent(args.query, { limit: (args.limit as number) || 10 });\n          return {\n            content: [\n              {\n                type: 'text',\n                text: JSON.stringify(results, null, 2)\n              }\n            ]\n          };\n        }\n\n        case 'similar_files': {\n          if (!args || typeof args.file_path !== 'string') {\n            throw new Error('file_path is required');\n          }\n          const results = await findSimilarFiles(args.file_path, (args.limit as number) || 10);\n          return {\n            content: [\n              {\n                type: 'text',\n                text: JSON.stringify(results, null, 2)\n              }\n            ]\n          };\n        }\n\n        case 'get_content': {\n          if (!args || typeof args.file_path !== 'string') {\n            throw new Error('file_path is required');\n          }\n          const content = await getFileContent(args.file_path, args.chunks as string);\n          return {\n            content: [\n              {\n                type: 'text',\n                text: content\n              }\n            ]\n          };\n        }\n\n        case 'server_info': {\n          const status = await getIndexStatus();\n          return {\n            content: [\n              {\n                type: 'text',\n                text: JSON.stringify({\n                  name: 'directory-indexer',\n                  version: VERSION,\n                  status: status\n                }, null, 2)\n              }\n            ]\n          };\n        }\n\n        default:\n          throw new Error(`Unknown tool: ${name}`);\n      }\n    } catch (error) {\n      const errorMessage = error instanceof Error ? error.message : 'Unknown error';\n      return {\n        content: [\n          {\n            type: 'text',\n            text: `Error: ${errorMessage}`\n          }\n        ],\n        isError: true\n      };\n    }\n  });\n\n  const transport = new StdioServerTransport();\n  await server.connect(transport);\n  \n  if (config.verbose) {\n    console.error('MCP server started successfully');\n  }\n}","#!/usr/bin/env node\n\nimport { Command } from 'commander';\nimport { fileURLToPath } from 'url';\nimport { readFileSync } from 'fs';\nimport { join, dirname } from 'path';\nimport { indexDirectories } from './indexing.js';\nimport { searchContent, findSimilarFiles, getFileContent } from './search.js';\nimport { loadConfig } from './config.js';\nimport { getIndexStatus } from './storage.js';\nimport { startMcpServer } from './mcp.js';\n\n// Read version from package.json\nconst __dirname = dirname(fileURLToPath(import.meta.url));\nconst packageJsonPath = join(__dirname, '../package.json');\nconst packageJson = JSON.parse(readFileSync(packageJsonPath, 'utf-8'));\nconst VERSION = packageJson.version;\n\nexport async function main() {\n  const program = new Command();\n  \n  program\n    .name('directory-indexer')\n    .description('AI-powered directory indexing with semantic search')\n    .version(VERSION);\n\n  program\n    .command('index')\n    .description('Index directories for semantic search')\n    .argument('<paths...>', 'Directory paths to index')\n    .option('-v, --verbose', 'Enable verbose logging')\n    .action(async (paths: string[], options) => {\n      try {\n        const config = await loadConfig({ verbose: options.verbose });\n        console.log(`Indexing ${paths.length} directories...`);\n        const result = await indexDirectories(paths, config);\n        console.log(`Indexed ${result.indexed} files, skipped ${result.skipped} files, ${result.errors.length} errors`);\n        if (result.errors.length > 0 && config.verbose) {\n          console.log('Errors:', result.errors);\n        }\n      } catch (error) {\n        console.error('Error indexing directories:', error);\n        process.exit(1);\n      }\n    });\n\n  program\n    .command('search')\n    .description('Search indexed content semantically')\n    .argument('<query>', 'Search query')\n    .option('-l, --limit <number>', 'Maximum number of results', '10')\n    .option('-v, --verbose', 'Enable verbose logging')\n    .action(async (query: string, options) => {\n      try {\n        await loadConfig({ verbose: options.verbose });\n        const results = await searchContent(query, { limit: parseInt(options.limit) });\n        \n        if (results.length === 0) {\n          console.log('No results found');\n          return;\n        }\n\n        console.log(`Found ${results.length} results:\\n`);\n        results.forEach((result, index) => {\n          console.log(`${index + 1}. ${result.filePath}`);\n          console.log(`   Score: ${result.score.toFixed(3)}`);\n          if (result.content) {\n            console.log(`   Content: ${result.content.substring(0, 150)}...`);\n          }\n          console.log();\n        });\n      } catch (error) {\n        console.error('Error searching content:', error);\n        process.exit(1);\n      }\n    });\n\n  program\n    .command('similar')\n    .description('Find files similar to a given file')\n    .argument('<file>', 'File path to find similar files for')\n    .option('-l, --limit <number>', 'Maximum number of results', '10')\n    .option('-v, --verbose', 'Enable verbose logging')\n    .action(async (filePath: string, options) => {\n      try {\n        await loadConfig({ verbose: options.verbose });\n        const results = await findSimilarFiles(filePath, parseInt(options.limit));\n        \n        if (results.length === 0) {\n          console.log('No similar files found');\n          return;\n        }\n\n        console.log(`Found ${results.length} similar files:\\n`);\n        results.forEach((result, index) => {\n          console.log(`${index + 1}. ${result.filePath}`);\n          console.log(`   Similarity: ${result.score.toFixed(3)}`);\n          console.log();\n        });\n      } catch (error) {\n        console.error('Error finding similar files:', error);\n        process.exit(1);\n      }\n    });\n\n  program\n    .command('get')\n    .description('Get file content')\n    .argument('<file>', 'File path to retrieve')\n    .option('-c, --chunks <range>', 'Chunk range (e.g., \"2-5\")')\n    .option('-v, --verbose', 'Enable verbose logging')\n    .action(async (filePath: string, options) => {\n      try {\n        await loadConfig({ verbose: options.verbose });\n        const content = await getFileContent(filePath, options.chunks);\n        console.log(content);\n      } catch (error) {\n        console.error('Error getting file content:', error);\n        process.exit(1);\n      }\n    });\n\n  program\n    .command('serve')\n    .description('Start MCP server')\n    .option('-v, --verbose', 'Enable verbose logging')\n    .action(async (options) => {\n      try {\n        const config = await loadConfig({ verbose: options.verbose });\n        await startMcpServer(config);\n      } catch (error) {\n        console.error('Error starting MCP server:', error);\n        process.exit(1);\n      }\n    });\n\n  program\n    .command('status')\n    .description('Show indexing status')\n    .option('-v, --verbose', 'Enable verbose logging')\n    .action(async (options) => {\n      try {\n        await loadConfig({ verbose: options.verbose });\n        const status = await getIndexStatus();\n        \n        console.log('Directory Indexer Status Report');\n        console.log('=====================================');\n        console.log('');\n        console.log('OVERVIEW:');\n        console.log(`  • ${status.directoriesIndexed} directories have been indexed`);\n        console.log(`  • ${status.filesIndexed} files processed for semantic search`);\n        console.log(`  • ${status.chunksIndexed} text chunks available for AI search`);\n        console.log(`  • Database storage: ${status.databaseSize}`);\n        console.log(`  • Most recent indexing: ${status.lastIndexed || 'No indexing performed yet'}`);\n        \n        if (status.errors.length > 0) {\n          console.log(`  • Processing errors encountered: ${status.errors.length}`);\n          if (options.verbose) {\n            console.log('');\n            console.log('RECENT ERRORS:');\n            status.errors.slice(0, 5).forEach(error => {\n              console.log(`  - ${error}`);\n            });\n          }\n        }\n        \n        console.log('');\n        console.log('INDEXED DIRECTORIES:');\n        if (status.directories.length === 0) {\n          console.log('  No directories have been indexed yet.');\n          console.log('  Run \"directory-indexer index <path>\" to start indexing.');\n        } else {\n          status.directories.forEach(dir => {\n            console.log('');\n            console.log(`  Directory: ${dir.path}`);\n            console.log(`    • Indexing status: ${dir.status}`);\n            console.log(`    • Files processed: ${dir.filesCount}`);\n            console.log(`    • Searchable chunks: ${dir.chunksCount}`);\n            console.log(`    • Last indexed: ${dir.lastIndexed || 'Never completed'}`);\n            if (dir.errors.length > 0) {\n              console.log(`    • Files with errors: ${dir.errors.length}`);\n              if (options.verbose) {\n                console.log('    • Recent errors:');\n                dir.errors.slice(0, 3).forEach(error => {\n                  console.log(`      - ${error}`);\n                });\n              }\n            }\n          });\n        }\n        \n        if (!status.qdrantConsistency.isConsistent) {\n          console.log('');\n          console.log('SYSTEM STATUS:');\n          status.qdrantConsistency.issues.forEach(issue => {\n            console.log(`  • ${issue}`);\n          });\n          console.log('');\n          console.log('ℹ️  Note: Status messages above may be normal during setup or active indexing.');\n        } else {\n          console.log('');\n          console.log('SYSTEM STATUS:');\n          console.log('  • All systems operational - ready for AI-powered search');\n        }\n      } catch (error) {\n        console.error('Error getting status:', error);\n        process.exit(1);\n      }\n    });\n\n  await program.parseAsync();\n}\n\n// Main function is already exported above"],"names":["__dirname","packageJsonPath","packageJson","VERSION"],"mappings":";;;;;;;;;;;;AAgBA,MAAMA,cAAY,QAAQ,cAAc,YAAY,GAAG,CAAC;AACxD,MAAMC,oBAAkB,KAAKD,aAAW,iBAAiB;AACzD,MAAME,gBAAc,KAAK,MAAM,aAAaD,mBAAiB,OAAO,CAAC;AACrE,MAAME,YAAUD,cAAY;AAE5B,MAAM,YAAoB;AAAA,EACxB;AAAA,IACE,MAAM;AAAA,IACN,aAAa;AAAA,IACb,aAAa;AAAA,MACX,MAAM;AAAA,MACN,YAAY;AAAA,QACV,gBAAgB;AAAA,UACd,MAAM;AAAA,UACN,aAAa;AAAA,QAAA;AAAA,MACf;AAAA,MAEF,UAAU,CAAC,gBAAgB;AAAA,IAAA;AAAA,EAC7B;AAAA,EAEF;AAAA,IACE,MAAM;AAAA,IACN,aAAa;AAAA,IACb,aAAa;AAAA,MACX,MAAM;AAAA,MACN,YAAY;AAAA,QACV,OAAO;AAAA,UACL,MAAM;AAAA,UACN,aAAa;AAAA,QAAA;AAAA,QAEf,OAAO;AAAA,UACL,MAAM;AAAA,UACN,aAAa;AAAA,UACb,SAAS;AAAA,QAAA;AAAA,MACX;AAAA,MAEF,UAAU,CAAC,OAAO;AAAA,IAAA;AAAA,EACpB;AAAA,EAEF;AAAA,IACE,MAAM;AAAA,IACN,aAAa;AAAA,IACb,aAAa;AAAA,MACX,MAAM;AAAA,MACN,YAAY;AAAA,QACV,WAAW;AAAA,UACT,MAAM;AAAA,UACN,aAAa;AAAA,QAAA;AAAA,QAEf,OAAO;AAAA,UACL,MAAM;AAAA,UACN,aAAa;AAAA,UACb,SAAS;AAAA,QAAA;AAAA,MACX;AAAA,MAEF,UAAU,CAAC,WAAW;AAAA,IAAA;AAAA,EACxB;AAAA,EAEF;AAAA,IACE,MAAM;AAAA,IACN,aAAa;AAAA,IACb,aAAa;AAAA,MACX,MAAM;AAAA,MACN,YAAY;AAAA,QACV,WAAW;AAAA,UACT,MAAM;AAAA,UACN,aAAa;AAAA,QAAA;AAAA,QAEf,QAAQ;AAAA,UACN,MAAM;AAAA,UACN,aAAa;AAAA,QAAA;AAAA,MACf;AAAA,MAEF,UAAU,CAAC,WAAW;AAAA,IAAA;AAAA,EACxB;AAAA,EAEF;AAAA,IACE,MAAM;AAAA,IACN,aAAa;AAAA,IACb,aAAa;AAAA,MACX,MAAM;AAAA,MACN,YAAY,CAAA;AAAA,IAAC;AAAA,EACf;AAEJ;AAEA,eAAsB,eAAe,QAA+B;AAClE,QAAM,SAAS,IAAI;AAAA,IACjB;AAAA,MACE,MAAM;AAAA,MACN,SAASC;AAAAA,IAAA;AAAA,IAEX;AAAA,MACE,cAAc;AAAA,QACZ,OAAO,CAAA;AAAA,MAAC;AAAA,IACV;AAAA,EACF;AAGF,SAAO,kBAAkB,wBAAwB,YAAY;AAC3D,WAAO;AAAA,MACL,OAAO;AAAA,IAAA;AAAA,EAEX,CAAC;AAED,SAAO,kBAAkB,uBAAuB,OAAO,YAAY;AACjE,UAAM,EAAE,MAAM,WAAW,KAAA,IAAS,QAAQ;AAE1C,QAAI;AACF,cAAQ,MAAA;AAAA,QACN,KAAK,SAAS;AACZ,cAAI,CAAC,QAAQ,OAAO,KAAK,mBAAmB,UAAU;AACpD,kBAAM,IAAI,MAAM,4BAA4B;AAAA,UAC9C;AACA,gBAAM,QAAQ,KAAK,eAAe,MAAM,GAAG,EAAE,IAAI,CAAC,MAAc,EAAE,KAAA,CAAM;AACxE,gBAAM,SAAS,MAAM,iBAAiB,OAAO,MAAM;AACnD,iBAAO;AAAA,YACL,SAAS;AAAA,cACP;AAAA,gBACE,MAAM;AAAA,gBACN,MAAM,WAAW,OAAO,OAAO,mBAAmB,OAAO,OAAO,WAAW,OAAO,OAAO,MAAM;AAAA,cAAA;AAAA,YACjG;AAAA,UACF;AAAA,QAEJ;AAAA,QAEA,KAAK,UAAU;AACb,cAAI,CAAC,QAAQ,OAAO,KAAK,UAAU,UAAU;AAC3C,kBAAM,IAAI,MAAM,mBAAmB;AAAA,UACrC;AACA,gBAAM,UAAU,MAAM,cAAc,KAAK,OAAO,EAAE,OAAQ,KAAK,SAAoB,IAAI;AACvF,iBAAO;AAAA,YACL,SAAS;AAAA,cACP;AAAA,gBACE,MAAM;AAAA,gBACN,MAAM,KAAK,UAAU,SAAS,MAAM,CAAC;AAAA,cAAA;AAAA,YACvC;AAAA,UACF;AAAA,QAEJ;AAAA,QAEA,KAAK,iBAAiB;AACpB,cAAI,CAAC,QAAQ,OAAO,KAAK,cAAc,UAAU;AAC/C,kBAAM,IAAI,MAAM,uBAAuB;AAAA,UACzC;AACA,gBAAM,UAAU,MAAM,iBAAiB,KAAK,WAAY,KAAK,SAAoB,EAAE;AACnF,iBAAO;AAAA,YACL,SAAS;AAAA,cACP;AAAA,gBACE,MAAM;AAAA,gBACN,MAAM,KAAK,UAAU,SAAS,MAAM,CAAC;AAAA,cAAA;AAAA,YACvC;AAAA,UACF;AAAA,QAEJ;AAAA,QAEA,KAAK,eAAe;AAClB,cAAI,CAAC,QAAQ,OAAO,KAAK,cAAc,UAAU;AAC/C,kBAAM,IAAI,MAAM,uBAAuB;AAAA,UACzC;AACA,gBAAM,UAAU,MAAM,eAAe,KAAK,WAAW,KAAK,MAAgB;AAC1E,iBAAO;AAAA,YACL,SAAS;AAAA,cACP;AAAA,gBACE,MAAM;AAAA,gBACN,MAAM;AAAA,cAAA;AAAA,YACR;AAAA,UACF;AAAA,QAEJ;AAAA,QAEA,KAAK,eAAe;AAClB,gBAAM,SAAS,MAAM,eAAA;AACrB,iBAAO;AAAA,YACL,SAAS;AAAA,cACP;AAAA,gBACE,MAAM;AAAA,gBACN,MAAM,KAAK,UAAU;AAAA,kBACnB,MAAM;AAAA,kBACN,SAASA;AAAAA,kBACT;AAAA,gBAAA,GACC,MAAM,CAAC;AAAA,cAAA;AAAA,YACZ;AAAA,UACF;AAAA,QAEJ;AAAA,QAEA;AACE,gBAAM,IAAI,MAAM,iBAAiB,IAAI,EAAE;AAAA,MAAA;AAAA,IAE7C,SAAS,OAAO;AACd,YAAM,eAAe,iBAAiB,QAAQ,MAAM,UAAU;AAC9D,aAAO;AAAA,QACL,SAAS;AAAA,UACP;AAAA,YACE,MAAM;AAAA,YACN,MAAM,UAAU,YAAY;AAAA,UAAA;AAAA,QAC9B;AAAA,QAEF,SAAS;AAAA,MAAA;AAAA,IAEb;AAAA,EACF,CAAC;AAED,QAAM,YAAY,IAAI,qBAAA;AACtB,QAAM,OAAO,QAAQ,SAAS;AAE9B,MAAI,OAAO,SAAS;AAClB,YAAQ,MAAM,iCAAiC;AAAA,EACjD;AACF;ACrNA,MAAM,YAAY,QAAQ,cAAc,YAAY,GAAG,CAAC;AACxD,MAAM,kBAAkB,KAAK,WAAW,iBAAiB;AACzD,MAAM,cAAc,KAAK,MAAM,aAAa,iBAAiB,OAAO,CAAC;AACrE,MAAM,UAAU,YAAY;AAE5B,eAAsB,OAAO;AAC3B,QAAM,UAAU,IAAI,QAAA;AAEpB,UACG,KAAK,mBAAmB,EACxB,YAAY,oDAAoD,EAChE,QAAQ,OAAO;AAElB,UACG,QAAQ,OAAO,EACf,YAAY,uCAAuC,EACnD,SAAS,cAAc,0BAA0B,EACjD,OAAO,iBAAiB,wBAAwB,EAChD,OAAO,OAAO,OAAiB,YAAY;AAC1C,QAAI;AACF,YAAM,SAAS,MAAM,WAAW,EAAE,SAAS,QAAQ,SAAS;AAC5D,cAAQ,IAAI,YAAY,MAAM,MAAM,iBAAiB;AACrD,YAAM,SAAS,MAAM,iBAAiB,OAAO,MAAM;AACnD,cAAQ,IAAI,WAAW,OAAO,OAAO,mBAAmB,OAAO,OAAO,WAAW,OAAO,OAAO,MAAM,SAAS;AAC9G,UAAI,OAAO,OAAO,SAAS,KAAK,OAAO,SAAS;AAC9C,gBAAQ,IAAI,WAAW,OAAO,MAAM;AAAA,MACtC;AAAA,IACF,SAAS,OAAO;AACd,cAAQ,MAAM,+BAA+B,KAAK;AAClD,cAAQ,KAAK,CAAC;AAAA,IAChB;AAAA,EACF,CAAC;AAEH,UACG,QAAQ,QAAQ,EAChB,YAAY,qCAAqC,EACjD,SAAS,WAAW,cAAc,EAClC,OAAO,wBAAwB,6BAA6B,IAAI,EAChE,OAAO,iBAAiB,wBAAwB,EAChD,OAAO,OAAO,OAAe,YAAY;AACxC,QAAI;AACF,YAAM,WAAW,EAAE,SAAS,QAAQ,SAAS;AAC7C,YAAM,UAAU,MAAM,cAAc,OAAO,EAAE,OAAO,SAAS,QAAQ,KAAK,GAAG;AAE7E,UAAI,QAAQ,WAAW,GAAG;AACxB,gBAAQ,IAAI,kBAAkB;AAC9B;AAAA,MACF;AAEA,cAAQ,IAAI,SAAS,QAAQ,MAAM;AAAA,CAAa;AAChD,cAAQ,QAAQ,CAAC,QAAQ,UAAU;AACjC,gBAAQ,IAAI,GAAG,QAAQ,CAAC,KAAK,OAAO,QAAQ,EAAE;AAC9C,gBAAQ,IAAI,aAAa,OAAO,MAAM,QAAQ,CAAC,CAAC,EAAE;AAClD,YAAI,OAAO,SAAS;AAClB,kBAAQ,IAAI,eAAe,OAAO,QAAQ,UAAU,GAAG,GAAG,CAAC,KAAK;AAAA,QAClE;AACA,gBAAQ,IAAA;AAAA,MACV,CAAC;AAAA,IACH,SAAS,OAAO;AACd,cAAQ,MAAM,4BAA4B,KAAK;AAC/C,cAAQ,KAAK,CAAC;AAAA,IAChB;AAAA,EACF,CAAC;AAEH,UACG,QAAQ,SAAS,EACjB,YAAY,oCAAoC,EAChD,SAAS,UAAU,qCAAqC,EACxD,OAAO,wBAAwB,6BAA6B,IAAI,EAChE,OAAO,iBAAiB,wBAAwB,EAChD,OAAO,OAAO,UAAkB,YAAY;AAC3C,QAAI;AACF,YAAM,WAAW,EAAE,SAAS,QAAQ,SAAS;AAC7C,YAAM,UAAU,MAAM,iBAAiB,UAAU,SAAS,QAAQ,KAAK,CAAC;AAExE,UAAI,QAAQ,WAAW,GAAG;AACxB,gBAAQ,IAAI,wBAAwB;AACpC;AAAA,MACF;AAEA,cAAQ,IAAI,SAAS,QAAQ,MAAM;AAAA,CAAmB;AACtD,cAAQ,QAAQ,CAAC,QAAQ,UAAU;AACjC,gBAAQ,IAAI,GAAG,QAAQ,CAAC,KAAK,OAAO,QAAQ,EAAE;AAC9C,gBAAQ,IAAI,kBAAkB,OAAO,MAAM,QAAQ,CAAC,CAAC,EAAE;AACvD,gBAAQ,IAAA;AAAA,MACV,CAAC;AAAA,IACH,SAAS,OAAO;AACd,cAAQ,MAAM,gCAAgC,KAAK;AACnD,cAAQ,KAAK,CAAC;AAAA,IAChB;AAAA,EACF,CAAC;AAEH,UACG,QAAQ,KAAK,EACb,YAAY,kBAAkB,EAC9B,SAAS,UAAU,uBAAuB,EAC1C,OAAO,wBAAwB,2BAA2B,EAC1D,OAAO,iBAAiB,wBAAwB,EAChD,OAAO,OAAO,UAAkB,YAAY;AAC3C,QAAI;AACF,YAAM,WAAW,EAAE,SAAS,QAAQ,SAAS;AAC7C,YAAM,UAAU,MAAM,eAAe,UAAU,QAAQ,MAAM;AAC7D,cAAQ,IAAI,OAAO;AAAA,IACrB,SAAS,OAAO;AACd,cAAQ,MAAM,+BAA+B,KAAK;AAClD,cAAQ,KAAK,CAAC;AAAA,IAChB;AAAA,EACF,CAAC;AAEH,UACG,QAAQ,OAAO,EACf,YAAY,kBAAkB,EAC9B,OAAO,iBAAiB,wBAAwB,EAChD,OAAO,OAAO,YAAY;AACzB,QAAI;AACF,YAAM,SAAS,MAAM,WAAW,EAAE,SAAS,QAAQ,SAAS;AAC5D,YAAM,eAAe,MAAM;AAAA,IAC7B,SAAS,OAAO;AACd,cAAQ,MAAM,8BAA8B,KAAK;AACjD,cAAQ,KAAK,CAAC;AAAA,IAChB;AAAA,EACF,CAAC;AAEH,UACG,QAAQ,QAAQ,EAChB,YAAY,sBAAsB,EAClC,OAAO,iBAAiB,wBAAwB,EAChD,OAAO,OAAO,YAAY;AACzB,QAAI;AACF,YAAM,WAAW,EAAE,SAAS,QAAQ,SAAS;AAC7C,YAAM,SAAS,MAAM,eAAA;AAErB,cAAQ,IAAI,iCAAiC;AAC7C,cAAQ,IAAI,uCAAuC;AACnD,cAAQ,IAAI,EAAE;AACd,cAAQ,IAAI,WAAW;AACvB,cAAQ,IAAI,OAAO,OAAO,kBAAkB,gCAAgC;AAC5E,cAAQ,IAAI,OAAO,OAAO,YAAY,sCAAsC;AAC5E,cAAQ,IAAI,OAAO,OAAO,aAAa,sCAAsC;AAC7E,cAAQ,IAAI,yBAAyB,OAAO,YAAY,EAAE;AAC1D,cAAQ,IAAI,6BAA6B,OAAO,eAAe,2BAA2B,EAAE;AAE5F,UAAI,OAAO,OAAO,SAAS,GAAG;AAC5B,gBAAQ,IAAI,sCAAsC,OAAO,OAAO,MAAM,EAAE;AACxE,YAAI,QAAQ,SAAS;AACnB,kBAAQ,IAAI,EAAE;AACd,kBAAQ,IAAI,gBAAgB;AAC5B,iBAAO,OAAO,MAAM,GAAG,CAAC,EAAE,QAAQ,CAAA,UAAS;AACzC,oBAAQ,IAAI,OAAO,KAAK,EAAE;AAAA,UAC5B,CAAC;AAAA,QACH;AAAA,MACF;AAEA,cAAQ,IAAI,EAAE;AACd,cAAQ,IAAI,sBAAsB;AAClC,UAAI,OAAO,YAAY,WAAW,GAAG;AACnC,gBAAQ,IAAI,yCAAyC;AACrD,gBAAQ,IAAI,2DAA2D;AAAA,MACzE,OAAO;AACL,eAAO,YAAY,QAAQ,CAAA,QAAO;AAChC,kBAAQ,IAAI,EAAE;AACd,kBAAQ,IAAI,gBAAgB,IAAI,IAAI,EAAE;AACtC,kBAAQ,IAAI,0BAA0B,IAAI,MAAM,EAAE;AAClD,kBAAQ,IAAI,0BAA0B,IAAI,UAAU,EAAE;AACtD,kBAAQ,IAAI,4BAA4B,IAAI,WAAW,EAAE;AACzD,kBAAQ,IAAI,uBAAuB,IAAI,eAAe,iBAAiB,EAAE;AACzE,cAAI,IAAI,OAAO,SAAS,GAAG;AACzB,oBAAQ,IAAI,4BAA4B,IAAI,OAAO,MAAM,EAAE;AAC3D,gBAAI,QAAQ,SAAS;AACnB,sBAAQ,IAAI,sBAAsB;AAClC,kBAAI,OAAO,MAAM,GAAG,CAAC,EAAE,QAAQ,CAAA,UAAS;AACtC,wBAAQ,IAAI,WAAW,KAAK,EAAE;AAAA,cAChC,CAAC;AAAA,YACH;AAAA,UACF;AAAA,QACF,CAAC;AAAA,MACH;AAEA,UAAI,CAAC,OAAO,kBAAkB,cAAc;AAC1C,gBAAQ,IAAI,EAAE;AACd,gBAAQ,IAAI,gBAAgB;AAC5B,eAAO,kBAAkB,OAAO,QAAQ,CAAA,UAAS;AAC/C,kBAAQ,IAAI,OAAO,KAAK,EAAE;AAAA,QAC5B,CAAC;AACD,gBAAQ,IAAI,EAAE;AACd,gBAAQ,IAAI,gFAAgF;AAAA,MAC9F,OAAO;AACL,gBAAQ,IAAI,EAAE;AACd,gBAAQ,IAAI,gBAAgB;AAC5B,gBAAQ,IAAI,2DAA2D;AAAA,MACzE;AAAA,IACF,SAAS,OAAO;AACd,cAAQ,MAAM,yBAAyB,KAAK;AAC5C,cAAQ,KAAK,CAAC;AAAA,IAChB;AAAA,EACF,CAAC;AAEH,QAAM,QAAQ,WAAA;AAChB;"}
+{"version":3,"file":"cli.js","sources":["../src/mcp.ts","../src/cli.ts"],"sourcesContent":["import { Server } from '@modelcontextprotocol/sdk/server/index.js';\nimport { StdioServerTransport } from '@modelcontextprotocol/sdk/server/stdio.js';\nimport { \n  CallToolRequestSchema, \n  ListToolsRequestSchema,\n  Tool\n} from '@modelcontextprotocol/sdk/types.js';\nimport { readFileSync } from 'fs';\nimport { join, dirname } from 'path';\nimport { fileURLToPath } from 'url';\nimport { Config } from './config.js';\nimport { indexDirectories } from './indexing.js';\nimport { searchContent, findSimilarFiles, getFileContent, getChunkContent } from './search.js';\nimport { getIndexStatus } from './storage.js';\n\n// Read version from package.json\nconst __dirname = dirname(fileURLToPath(import.meta.url));\nconst packageJsonPath = join(__dirname, '../package.json');\nconst packageJson = JSON.parse(readFileSync(packageJsonPath, 'utf-8'));\nconst VERSION = packageJson.version;\n\nconst MCP_TOOLS: Tool[] = [\n  {\n    name: 'index',\n    description: `Index directories to make their files searchable. Processes files to create vector embeddings for semantic search.\n\nWhen to use this tool:\n- User specifically requests indexing a directory as a knowledge base\n- Adding new documentation, code repositories, or file collections to search\n- Updating index when many files have changed\n\nHow it works:\n- Recursively scans directories for supported file types\n- Extracts text content and splits into chunks\n- Generates vector embeddings for semantic similarity\n- Stores in database for fast retrieval\n\nExamples:\n- Index documentation: \"/home/user/docs/project-wiki\"\n- Index codebase: \"/home/user/projects/api-server\"\n- Index multiple directories: \"/home/user/docs,/home/user/configs\"\n\nIndexing can take several minutes for large directories. Most users will already have directories indexed and can directly use search tool. Use server_info to check current indexing status first.`,\n    inputSchema: {\n      type: 'object',\n      properties: {\n        directory_path: {\n          type: 'string',\n          description: 'Comma-separated list of absolute directory paths to index. Must be absolute paths since MCP server runs independently. Examples: \"/home/user/projects\" (Unix) or \"C:\\\\Users\\\\user\\\\projects\" (Windows)'\n        }\n      },\n      required: ['directory_path']\n    }\n  },\n  {\n    name: 'search',\n    description: `Search indexed files using natural language queries. Finds files containing content semantically similar to the query.\n\nWhen to use this tool:\n- Find documentation, guides, or explanations about specific topics\n- Locate code files implementing certain functionality or patterns\n- Discover configuration files, scripts, or settings related to a topic\n- Search for files covering specific concepts or technologies\n\nHow it works:\n- Converts query to vector embedding using semantic similarity\n- Searches all indexed file chunks for relevant content\n- Groups results by file and calculates average relevance scores\n- Returns files ranked by relevance score\n\nExamples:\n- \"database configuration\" - finds config files, documentation about DB setup\n- \"error handling patterns\" - finds code files with exception handling\n- \"authentication implementation\" - finds auth-related code and docs\n- \"API documentation\" - finds API guides, endpoint definitions\n- \"deployment scripts\" - finds CI/CD configs, deployment automation\n\nReturns files with similarity scores and chunk information. Use get_content to retrieve full file content or get_chunk to retrieve specific chunk content by chunk ID.\n- Groups results by file to avoid duplicates from multiple matching sections\n\nResponse format:\n- Returns lightweight metadata including file paths, relevance scores, and chunk IDs\n- Use 'get_chunk' or 'get_content' tools to fetch actual content from search results\n- Chunks are sorted by relevance score within each file\n- Average similarity score calculated across all matching chunks per file\n\nExample queries:\n- \"error handling patterns\" (finds try/catch, error classes, logging)\n- \"database migration scripts\" (finds SQL, schema changes, migration files)\n- \"authentication middleware\" (finds auth logic, JWT handling, middleware functions)`,\n    inputSchema: {\n      type: 'object',\n      properties: {\n        query: {\n          type: 'string',\n          description: 'Natural language search query describing what you are looking for. Can be concepts, functionality, or specific technical terms.'\n        },\n        limit: {\n          type: 'number',\n          description: 'Maximum number of files to return (default: 10). Each file may contain multiple matching chunks.',\n          default: 10\n        }\n      },\n      required: ['query']\n    }\n  },\n  {\n    name: 'similar_files',\n    description: `Find files with content similar to a reference file. Uses semantic similarity to find related documents, code files, or any text content.\n\nWhen to use this tool:\n- Find documentation similar to a specific guide or README\n- Locate related code files, configuration files, or scripts\n- Discover alternative implementations or approaches\n- Find files covering similar topics or concepts\n\nHow it works:\n- Analyzes the semantic content of the reference file\n- Compares against all indexed files using vector similarity\n- Returns files ranked by content similarity score\n\nExamples:\n- Given \"deployment-guide.md\" - finds other deployment docs, CI/CD guides, infrastructure setup\n- Given \"troubleshooting.md\" - finds other troubleshooting guides, FAQ files, error documentation\n- Given \"config.yaml\" - finds other configuration files, settings, environment setups\n- Given \"auth.py\" - finds other authentication modules, security code, middleware\n\nReturns file paths with similarity scores. Use get_content to read full files or get_chunk for specific sections.`,\n    inputSchema: {\n      type: 'object',\n      properties: {\n        file_path: {\n          type: 'string',\n          description: 'Absolute or relative path to the reference file. This file must have been previously indexed.'\n        },\n        limit: {\n          type: 'number',\n          description: 'Maximum number of similar files to return (default: 10). Results are sorted by similarity score.',\n          default: 10\n        }\n      },\n      required: ['file_path']\n    }\n  },\n  {\n    name: 'get_content',\n    description: `Retrieve the full content of a file or specific chunks. Reads files directly from the filesystem.\n\nWhen to use this tool:\n- Get complete file content after finding files through search\n- Read documentation, code files, or configuration files for analysis\n- Extract specific sections of large files using chunk ranges\n- Access any text-based file content\n\nHow it works:\n- Reads files directly from filesystem (not from search index)\n- Returns entire file by default\n- Can return specific chunk ranges for indexed files\n- Preserves original formatting and content\n\nExamples:\n- Get full file: file_path=\"/home/user/docs/api.md\"\n- Get specific chunks: file_path=\"/home/user/code/main.py\", chunks=\"2-5\"\n- Get single chunk: file_path=\"/home/user/config.json\", chunks=\"1\"\n\nReturns file content as text. Use this after search or similar_files to read actual content.`,\n    inputSchema: {\n      type: 'object',\n      properties: {\n        file_path: {\n          type: 'string',\n          description: 'Absolute or relative path to the file to retrieve. File must be readable and text-based.'\n        },\n        chunks: {\n          type: 'string',\n          description: 'Optional chunk range specification. Examples: \"3\" (single chunk), \"2-5\" (chunks 2 through 5), \"1-3\" (first three chunks). Only works for indexed files.'\n        }\n      },\n      required: ['file_path']\n    }\n  },\n  {\n    name: 'get_chunk',\n    description: `Retrieve content of a specific chunk from an indexed file. Gets exact text segments identified during search.\n\nWhen to use this tool:\n- Get specific relevant sections after performing a search\n- Access only the most pertinent parts of large files\n- Retrieve content from high-scoring chunks identified in search results\n- Avoid reading entire files when only specific sections are needed\n\nHow it works:\n- Files are split into overlapping text chunks during indexing\n- Each chunk has a sequential ID (\"0\", \"1\", \"2\", etc.)\n- Search results include chunk IDs for relevant sections\n- Returns the exact content that was semantically matched\n\nExamples:\n- After search returns chunk \"3\" from \"api-docs.md\" with high score\n- Get chunk content: file_path=\"/docs/api-docs.md\", chunk_id=\"3\"\n- Returns the specific text segment that matched your query\n\nReturns chunk content as text. Use this with chunk IDs from search results to get precise content sections.`,\n    inputSchema: {\n      type: 'object',\n      properties: {\n        file_path: {\n          type: 'string',\n          description: 'Absolute or relative path to the indexed file containing the desired chunk.'\n        },\n        chunk_id: {\n          type: 'string',\n          description: 'ID of the specific chunk to retrieve. This is typically obtained from search results and is a sequential string like \"0\", \"1\", \"2\", etc.'\n        }\n      },\n      required: ['file_path', 'chunk_id']\n    }\n  },\n  {\n    name: 'server_info',\n    description: `Get information about server status and indexed content. Shows what directories and files are available for search.\n\nWhen to use this tool:\n- Check what content is already indexed before performing searches\n- Verify system is working properly\n- See indexing statistics and status\n- Understand scope of available searchable content\n\nHow it works:\n- Reports total indexed directories, files, and chunks\n- Shows database size and last indexing time\n- Lists all indexed directories with file counts\n- Reports any errors or issues\n\nExamples:\n- Check before searching: \"What content is indexed?\"\n- Verify after indexing: \"Did the indexing complete successfully?\"\n- Monitor system: \"How many files are searchable?\"\n\nReturns server version, indexing statistics, directory list, and any errors. Use this to understand what content is available for search and similar_files tools.`,\n    inputSchema: {\n      type: 'object',\n      properties: {},\n      additionalProperties: false\n    }\n  }\n];\n\nexport async function startMcpServer(config: Config): Promise<void> {\n  const server = new Server(\n    {\n      name: 'directory-indexer',\n      version: VERSION\n    },\n    {\n      capabilities: {\n        tools: {}\n      }\n    }\n  );\n\n  server.setRequestHandler(ListToolsRequestSchema, async () => {\n    return {\n      tools: MCP_TOOLS\n    };\n  });\n\n  server.setRequestHandler(CallToolRequestSchema, async (request) => {\n    const { name, arguments: args } = request.params;\n\n    try {\n      switch (name) {\n        case 'index': {\n          if (!args || typeof args.directory_path !== 'string') {\n            throw new Error('directory_path is required');\n          }\n          const paths = args.directory_path.split(',').map((p: string) => p.trim());\n          const result = await indexDirectories(paths, config);\n          return {\n            content: [\n              {\n                type: 'text',\n                text: `Indexed ${result.indexed} files, skipped ${result.skipped} files, ${result.errors.length} errors`\n              }\n            ]\n          };\n        }\n\n        case 'search': {\n          if (!args || typeof args.query !== 'string') {\n            throw new Error('query is required');\n          }\n          const results = await searchContent(args.query, { limit: (args.limit as number) || 10 });\n          return {\n            content: [\n              {\n                type: 'text',\n                text: JSON.stringify(results, null, 2)\n              }\n            ]\n          };\n        }\n\n        case 'similar_files': {\n          if (!args || typeof args.file_path !== 'string') {\n            throw new Error('file_path is required');\n          }\n          const results = await findSimilarFiles(args.file_path, (args.limit as number) || 10);\n          return {\n            content: [\n              {\n                type: 'text',\n                text: JSON.stringify(results, null, 2)\n              }\n            ]\n          };\n        }\n\n        case 'get_content': {\n          if (!args || typeof args.file_path !== 'string') {\n            throw new Error('file_path is required');\n          }\n          const content = await getFileContent(args.file_path, args.chunks as string);\n          return {\n            content: [\n              {\n                type: 'text',\n                text: content\n              }\n            ]\n          };\n        }\n\n        case 'get_chunk': {\n          if (!args || typeof args.file_path !== 'string' || typeof args.chunk_id !== 'string') {\n            throw new Error('file_path and chunk_id are required');\n          }\n          const content = await getChunkContent(args.file_path, args.chunk_id);\n          return {\n            content: [\n              {\n                type: 'text',\n                text: content\n              }\n            ]\n          };\n        }\n\n        case 'server_info': {\n          const status = await getIndexStatus();\n          return {\n            content: [\n              {\n                type: 'text',\n                text: JSON.stringify({\n                  name: 'directory-indexer',\n                  version: VERSION,\n                  status: status\n                }, null, 2)\n              }\n            ]\n          };\n        }\n\n        default:\n          throw new Error(`Unknown tool: ${name}`);\n      }\n    } catch (error) {\n      const errorMessage = error instanceof Error ? error.message : 'Unknown error';\n      return {\n        content: [\n          {\n            type: 'text',\n            text: `Error: ${errorMessage}`\n          }\n        ],\n        isError: true\n      };\n    }\n  });\n\n  const transport = new StdioServerTransport();\n  await server.connect(transport);\n  \n  if (config.verbose) {\n    console.error('MCP server started successfully');\n  }\n}","#!/usr/bin/env node\n\nimport { Command } from 'commander';\nimport { fileURLToPath } from 'url';\nimport { readFileSync } from 'fs';\nimport { join, dirname } from 'path';\nimport { indexDirectories } from './indexing.js';\nimport { searchContent, findSimilarFiles, getFileContent } from './search.js';\nimport { loadConfig } from './config.js';\nimport { getIndexStatus } from './storage.js';\nimport { startMcpServer } from './mcp.js';\n\n// Read version from package.json\nconst __dirname = dirname(fileURLToPath(import.meta.url));\nconst packageJsonPath = join(__dirname, '../package.json');\nconst packageJson = JSON.parse(readFileSync(packageJsonPath, 'utf-8'));\nconst VERSION = packageJson.version;\n\nexport async function main() {\n  const program = new Command();\n  \n  program\n    .name('directory-indexer')\n    .description('AI-powered directory indexing with semantic search')\n    .version(VERSION);\n\n  program\n    .command('index')\n    .description('Index directories for semantic search')\n    .argument('<paths...>', 'Directory paths to index')\n    .option('-v, --verbose', 'Enable verbose logging')\n    .action(async (paths: string[], options) => {\n      try {\n        const config = await loadConfig({ verbose: options.verbose });\n        console.log(`Indexing ${paths.length} ${paths.length === 1 ? 'directory' : 'directories'}: ${paths.join(', ')}`);\n        const result = await indexDirectories(paths, config);\n        console.log(`Indexed ${result.indexed} files, skipped ${result.skipped} files, ${result.errors.length} errors`);\n        if (result.errors.length > 0 && config.verbose) {\n          console.log('Errors:', result.errors);\n        }\n      } catch (error) {\n        console.error('Error indexing directories:', error);\n        process.exit(1);\n      }\n    });\n\n  program\n    .command('search')\n    .description('Search indexed content semantically')\n    .argument('<query>', 'Search query')\n    .option('-l, --limit <number>', 'Maximum number of results', '10')\n    .option('-c, --show-chunks', 'Show individual chunk scores and IDs')\n    .option('-v, --verbose', 'Enable verbose logging')\n    .action(async (query: string, options) => {\n      try {\n        await loadConfig({ verbose: options.verbose });\n        const results = await searchContent(query, { limit: parseInt(options.limit) });\n        \n        if (results.length === 0) {\n          console.log('No results found');\n          return;\n        }\n\n        console.log(`Found ${results.length} results:\\n`);\n        results.forEach((result, index) => {\n          console.log(`${index + 1}. ${result.filePath}`);\n          console.log(`   Score: ${result.score.toFixed(3)} (${result.matchingChunks} chunks)`);\n          \n          if (options.showChunks && result.chunks.length > 0) {\n            console.log(`   Chunks:`);\n            result.chunks.forEach(chunk => {\n              console.log(`     - Chunk ${chunk.chunkId}: ${chunk.score.toFixed(3)}`);\n            });\n          }\n          \n          console.log();\n        });\n      } catch (error) {\n        console.error('Error searching content:', error);\n        process.exit(1);\n      }\n    });\n\n  program\n    .command('similar')\n    .description('Find files similar to a given file')\n    .argument('<file>', 'File path to find similar files for')\n    .option('-l, --limit <number>', 'Maximum number of results', '10')\n    .option('-v, --verbose', 'Enable verbose logging')\n    .action(async (filePath: string, options) => {\n      try {\n        await loadConfig({ verbose: options.verbose });\n        const results = await findSimilarFiles(filePath, parseInt(options.limit));\n        \n        if (results.length === 0) {\n          console.log('No similar files found');\n          return;\n        }\n\n        console.log(`Found ${results.length} similar files:\\n`);\n        results.forEach((result, index) => {\n          console.log(`${index + 1}. ${result.filePath}`);\n          console.log(`   Similarity: ${result.score.toFixed(3)}`);\n          console.log();\n        });\n      } catch (error) {\n        console.error('Error finding similar files:', error);\n        process.exit(1);\n      }\n    });\n\n  program\n    .command('get')\n    .description('Get file content')\n    .argument('<file>', 'File path to retrieve')\n    .option('-c, --chunks <range>', 'Chunk range (e.g., \"2-5\")')\n    .option('-v, --verbose', 'Enable verbose logging')\n    .action(async (filePath: string, options) => {\n      try {\n        await loadConfig({ verbose: options.verbose });\n        const content = await getFileContent(filePath, options.chunks);\n        console.log(content);\n      } catch (error) {\n        console.error('Error getting file content:', error);\n        process.exit(1);\n      }\n    });\n\n  program\n    .command('serve')\n    .description('Start MCP server')\n    .option('-v, --verbose', 'Enable verbose logging')\n    .action(async (options) => {\n      try {\n        const config = await loadConfig({ verbose: options.verbose });\n        await startMcpServer(config);\n      } catch (error) {\n        console.error('Error starting MCP server:', error);\n        process.exit(1);\n      }\n    });\n\n  program\n    .command('status')\n    .description('Show indexing status')\n    .option('-v, --verbose', 'Enable verbose logging')\n    .action(async (options) => {\n      try {\n        await loadConfig({ verbose: options.verbose });\n        const status = await getIndexStatus();\n        \n        console.log('Directory Indexer Status Report');\n        console.log('=====================================');\n        console.log('');\n        console.log('OVERVIEW:');\n        console.log(`  • ${status.directoriesIndexed} directories have been indexed`);\n        console.log(`  • ${status.filesIndexed} files processed for semantic search`);\n        console.log(`  • ${status.chunksIndexed} text chunks available for AI search`);\n        console.log(`  • Database storage: ${status.databaseSize}`);\n        console.log(`  • Most recent indexing: ${status.lastIndexed || 'No indexing performed yet'}`);\n        \n        if (status.errors.length > 0) {\n          console.log(`  • Processing errors encountered: ${status.errors.length}`);\n          if (options.verbose) {\n            console.log('');\n            console.log('RECENT ERRORS:');\n            status.errors.slice(0, 5).forEach(error => {\n              console.log(`  - ${error}`);\n            });\n          }\n        }\n        \n        console.log('');\n        console.log('INDEXED DIRECTORIES:');\n        if (status.directories.length === 0) {\n          console.log('  No directories have been indexed yet.');\n          console.log('  Run \"directory-indexer index <path>\" to start indexing.');\n        } else {\n          status.directories.forEach(dir => {\n            console.log('');\n            console.log(`  Directory: ${dir.path}`);\n            console.log(`    • Indexing status: ${dir.status}`);\n            console.log(`    • Files processed: ${dir.filesCount}`);\n            console.log(`    • Searchable chunks: ${dir.chunksCount}`);\n            console.log(`    • Last indexed: ${dir.lastIndexed || 'Never completed'}`);\n            if (dir.errors.length > 0) {\n              console.log(`    • Files with errors: ${dir.errors.length}`);\n              if (options.verbose) {\n                console.log('    • Recent errors:');\n                dir.errors.slice(0, 3).forEach(error => {\n                  console.log(`      - ${error}`);\n                });\n              }\n            }\n          });\n        }\n        \n        if (!status.qdrantConsistency.isConsistent) {\n          console.log('');\n          console.log('SYSTEM STATUS:');\n          status.qdrantConsistency.issues.forEach(issue => {\n            console.log(`  • ${issue}`);\n          });\n          console.log('');\n          console.log('ℹ️  Note: Status messages above may be normal during setup or active indexing.');\n        } else {\n          console.log('');\n          console.log('SYSTEM STATUS:');\n          console.log('  • All systems operational - ready for AI-powered search');\n        }\n      } catch (error) {\n        console.error('Error getting status:', error);\n        process.exit(1);\n      }\n    });\n\n  await program.parseAsync();\n}\n\n// Main function is already exported above"],"names":["__dirname","packageJsonPath","packageJson","VERSION"],"mappings":";;;;;;;;;;;;AAgBA,MAAMA,cAAY,QAAQ,cAAc,YAAY,GAAG,CAAC;AACxD,MAAMC,oBAAkB,KAAKD,aAAW,iBAAiB;AACzD,MAAME,gBAAc,KAAK,MAAM,aAAaD,mBAAiB,OAAO,CAAC;AACrE,MAAME,YAAUD,cAAY;AAE5B,MAAM,YAAoB;AAAA,EACxB;AAAA,IACE,MAAM;AAAA,IACN,aAAa;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA,IAmBb,aAAa;AAAA,MACX,MAAM;AAAA,MACN,YAAY;AAAA,QACV,gBAAgB;AAAA,UACd,MAAM;AAAA,UACN,aAAa;AAAA,QAAA;AAAA,MACf;AAAA,MAEF,UAAU,CAAC,gBAAgB;AAAA,IAAA;AAAA,EAC7B;AAAA,EAEF;AAAA,IACE,MAAM;AAAA,IACN,aAAa;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA,IAkCb,aAAa;AAAA,MACX,MAAM;AAAA,MACN,YAAY;AAAA,QACV,OAAO;AAAA,UACL,MAAM;AAAA,UACN,aAAa;AAAA,QAAA;AAAA,QAEf,OAAO;AAAA,UACL,MAAM;AAAA,UACN,aAAa;AAAA,UACb,SAAS;AAAA,QAAA;AAAA,MACX;AAAA,MAEF,UAAU,CAAC,OAAO;AAAA,IAAA;AAAA,EACpB;AAAA,EAEF;AAAA,IACE,MAAM;AAAA,IACN,aAAa;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA,IAoBb,aAAa;AAAA,MACX,MAAM;AAAA,MACN,YAAY;AAAA,QACV,WAAW;AAAA,UACT,MAAM;AAAA,UACN,aAAa;AAAA,QAAA;AAAA,QAEf,OAAO;AAAA,UACL,MAAM;AAAA,UACN,aAAa;AAAA,UACb,SAAS;AAAA,QAAA;AAAA,MACX;AAAA,MAEF,UAAU,CAAC,WAAW;AAAA,IAAA;AAAA,EACxB;AAAA,EAEF;AAAA,IACE,MAAM;AAAA,IACN,aAAa;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA,IAoBb,aAAa;AAAA,MACX,MAAM;AAAA,MACN,YAAY;AAAA,QACV,WAAW;AAAA,UACT,MAAM;AAAA,UACN,aAAa;AAAA,QAAA;AAAA,QAEf,QAAQ;AAAA,UACN,MAAM;AAAA,UACN,aAAa;AAAA,QAAA;AAAA,MACf;AAAA,MAEF,UAAU,CAAC,WAAW;AAAA,IAAA;AAAA,EACxB;AAAA,EAEF;AAAA,IACE,MAAM;AAAA,IACN,aAAa;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA,IAoBb,aAAa;AAAA,MACX,MAAM;AAAA,MACN,YAAY;AAAA,QACV,WAAW;AAAA,UACT,MAAM;AAAA,UACN,aAAa;AAAA,QAAA;AAAA,QAEf,UAAU;AAAA,UACR,MAAM;AAAA,UACN,aAAa;AAAA,QAAA;AAAA,MACf;AAAA,MAEF,UAAU,CAAC,aAAa,UAAU;AAAA,IAAA;AAAA,EACpC;AAAA,EAEF;AAAA,IACE,MAAM;AAAA,IACN,aAAa;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA,IAoBb,aAAa;AAAA,MACX,MAAM;AAAA,MACN,YAAY,CAAA;AAAA,MACZ,sBAAsB;AAAA,IAAA;AAAA,EACxB;AAEJ;AAEA,eAAsB,eAAe,QAA+B;AAClE,QAAM,SAAS,IAAI;AAAA,IACjB;AAAA,MACE,MAAM;AAAA,MACN,SAASC;AAAAA,IAAA;AAAA,IAEX;AAAA,MACE,cAAc;AAAA,QACZ,OAAO,CAAA;AAAA,MAAC;AAAA,IACV;AAAA,EACF;AAGF,SAAO,kBAAkB,wBAAwB,YAAY;AAC3D,WAAO;AAAA,MACL,OAAO;AAAA,IAAA;AAAA,EAEX,CAAC;AAED,SAAO,kBAAkB,uBAAuB,OAAO,YAAY;AACjE,UAAM,EAAE,MAAM,WAAW,KAAA,IAAS,QAAQ;AAE1C,QAAI;AACF,cAAQ,MAAA;AAAA,QACN,KAAK,SAAS;AACZ,cAAI,CAAC,QAAQ,OAAO,KAAK,mBAAmB,UAAU;AACpD,kBAAM,IAAI,MAAM,4BAA4B;AAAA,UAC9C;AACA,gBAAM,QAAQ,KAAK,eAAe,MAAM,GAAG,EAAE,IAAI,CAAC,MAAc,EAAE,KAAA,CAAM;AACxE,gBAAM,SAAS,MAAM,iBAAiB,OAAO,MAAM;AACnD,iBAAO;AAAA,YACL,SAAS;AAAA,cACP;AAAA,gBACE,MAAM;AAAA,gBACN,MAAM,WAAW,OAAO,OAAO,mBAAmB,OAAO,OAAO,WAAW,OAAO,OAAO,MAAM;AAAA,cAAA;AAAA,YACjG;AAAA,UACF;AAAA,QAEJ;AAAA,QAEA,KAAK,UAAU;AACb,cAAI,CAAC,QAAQ,OAAO,KAAK,UAAU,UAAU;AAC3C,kBAAM,IAAI,MAAM,mBAAmB;AAAA,UACrC;AACA,gBAAM,UAAU,MAAM,cAAc,KAAK,OAAO,EAAE,OAAQ,KAAK,SAAoB,IAAI;AACvF,iBAAO;AAAA,YACL,SAAS;AAAA,cACP;AAAA,gBACE,MAAM;AAAA,gBACN,MAAM,KAAK,UAAU,SAAS,MAAM,CAAC;AAAA,cAAA;AAAA,YACvC;AAAA,UACF;AAAA,QAEJ;AAAA,QAEA,KAAK,iBAAiB;AACpB,cAAI,CAAC,QAAQ,OAAO,KAAK,cAAc,UAAU;AAC/C,kBAAM,IAAI,MAAM,uBAAuB;AAAA,UACzC;AACA,gBAAM,UAAU,MAAM,iBAAiB,KAAK,WAAY,KAAK,SAAoB,EAAE;AACnF,iBAAO;AAAA,YACL,SAAS;AAAA,cACP;AAAA,gBACE,MAAM;AAAA,gBACN,MAAM,KAAK,UAAU,SAAS,MAAM,CAAC;AAAA,cAAA;AAAA,YACvC;AAAA,UACF;AAAA,QAEJ;AAAA,QAEA,KAAK,eAAe;AAClB,cAAI,CAAC,QAAQ,OAAO,KAAK,cAAc,UAAU;AAC/C,kBAAM,IAAI,MAAM,uBAAuB;AAAA,UACzC;AACA,gBAAM,UAAU,MAAM,eAAe,KAAK,WAAW,KAAK,MAAgB;AAC1E,iBAAO;AAAA,YACL,SAAS;AAAA,cACP;AAAA,gBACE,MAAM;AAAA,gBACN,MAAM;AAAA,cAAA;AAAA,YACR;AAAA,UACF;AAAA,QAEJ;AAAA,QAEA,KAAK,aAAa;AAChB,cAAI,CAAC,QAAQ,OAAO,KAAK,cAAc,YAAY,OAAO,KAAK,aAAa,UAAU;AACpF,kBAAM,IAAI,MAAM,qCAAqC;AAAA,UACvD;AACA,gBAAM,UAAU,MAAM,gBAAgB,KAAK,WAAW,KAAK,QAAQ;AACnE,iBAAO;AAAA,YACL,SAAS;AAAA,cACP;AAAA,gBACE,MAAM;AAAA,gBACN,MAAM;AAAA,cAAA;AAAA,YACR;AAAA,UACF;AAAA,QAEJ;AAAA,QAEA,KAAK,eAAe;AAClB,gBAAM,SAAS,MAAM,eAAA;AACrB,iBAAO;AAAA,YACL,SAAS;AAAA,cACP;AAAA,gBACE,MAAM;AAAA,gBACN,MAAM,KAAK,UAAU;AAAA,kBACnB,MAAM;AAAA,kBACN,SAASA;AAAAA,kBACT;AAAA,gBAAA,GACC,MAAM,CAAC;AAAA,cAAA;AAAA,YACZ;AAAA,UACF;AAAA,QAEJ;AAAA,QAEA;AACE,gBAAM,IAAI,MAAM,iBAAiB,IAAI,EAAE;AAAA,MAAA;AAAA,IAE7C,SAAS,OAAO;AACd,YAAM,eAAe,iBAAiB,QAAQ,MAAM,UAAU;AAC9D,aAAO;AAAA,QACL,SAAS;AAAA,UACP;AAAA,YACE,MAAM;AAAA,YACN,MAAM,UAAU,YAAY;AAAA,UAAA;AAAA,QAC9B;AAAA,QAEF,SAAS;AAAA,MAAA;AAAA,IAEb;AAAA,EACF,CAAC;AAED,QAAM,YAAY,IAAI,qBAAA;AACtB,QAAM,OAAO,QAAQ,SAAS;AAE9B,MAAI,OAAO,SAAS;AAClB,YAAQ,MAAM,iCAAiC;AAAA,EACjD;AACF;ACtXA,MAAM,YAAY,QAAQ,cAAc,YAAY,GAAG,CAAC;AACxD,MAAM,kBAAkB,KAAK,WAAW,iBAAiB;AACzD,MAAM,cAAc,KAAK,MAAM,aAAa,iBAAiB,OAAO,CAAC;AACrE,MAAM,UAAU,YAAY;AAE5B,eAAsB,OAAO;AAC3B,QAAM,UAAU,IAAI,QAAA;AAEpB,UACG,KAAK,mBAAmB,EACxB,YAAY,oDAAoD,EAChE,QAAQ,OAAO;AAElB,UACG,QAAQ,OAAO,EACf,YAAY,uCAAuC,EACnD,SAAS,cAAc,0BAA0B,EACjD,OAAO,iBAAiB,wBAAwB,EAChD,OAAO,OAAO,OAAiB,YAAY;AAC1C,QAAI;AACF,YAAM,SAAS,MAAM,WAAW,EAAE,SAAS,QAAQ,SAAS;AAC5D,cAAQ,IAAI,YAAY,MAAM,MAAM,IAAI,MAAM,WAAW,IAAI,cAAc,aAAa,KAAK,MAAM,KAAK,IAAI,CAAC,EAAE;AAC/G,YAAM,SAAS,MAAM,iBAAiB,OAAO,MAAM;AACnD,cAAQ,IAAI,WAAW,OAAO,OAAO,mBAAmB,OAAO,OAAO,WAAW,OAAO,OAAO,MAAM,SAAS;AAC9G,UAAI,OAAO,OAAO,SAAS,KAAK,OAAO,SAAS;AAC9C,gBAAQ,IAAI,WAAW,OAAO,MAAM;AAAA,MACtC;AAAA,IACF,SAAS,OAAO;AACd,cAAQ,MAAM,+BAA+B,KAAK;AAClD,cAAQ,KAAK,CAAC;AAAA,IAChB;AAAA,EACF,CAAC;AAEH,UACG,QAAQ,QAAQ,EAChB,YAAY,qCAAqC,EACjD,SAAS,WAAW,cAAc,EAClC,OAAO,wBAAwB,6BAA6B,IAAI,EAChE,OAAO,qBAAqB,sCAAsC,EAClE,OAAO,iBAAiB,wBAAwB,EAChD,OAAO,OAAO,OAAe,YAAY;AACxC,QAAI;AACF,YAAM,WAAW,EAAE,SAAS,QAAQ,SAAS;AAC7C,YAAM,UAAU,MAAM,cAAc,OAAO,EAAE,OAAO,SAAS,QAAQ,KAAK,GAAG;AAE7E,UAAI,QAAQ,WAAW,GAAG;AACxB,gBAAQ,IAAI,kBAAkB;AAC9B;AAAA,MACF;AAEA,cAAQ,IAAI,SAAS,QAAQ,MAAM;AAAA,CAAa;AAChD,cAAQ,QAAQ,CAAC,QAAQ,UAAU;AACjC,gBAAQ,IAAI,GAAG,QAAQ,CAAC,KAAK,OAAO,QAAQ,EAAE;AAC9C,gBAAQ,IAAI,aAAa,OAAO,MAAM,QAAQ,CAAC,CAAC,KAAK,OAAO,cAAc,UAAU;AAEpF,YAAI,QAAQ,cAAc,OAAO,OAAO,SAAS,GAAG;AAClD,kBAAQ,IAAI,YAAY;AACxB,iBAAO,OAAO,QAAQ,CAAA,UAAS;AAC7B,oBAAQ,IAAI,gBAAgB,MAAM,OAAO,KAAK,MAAM,MAAM,QAAQ,CAAC,CAAC,EAAE;AAAA,UACxE,CAAC;AAAA,QACH;AAEA,gBAAQ,IAAA;AAAA,MACV,CAAC;AAAA,IACH,SAAS,OAAO;AACd,cAAQ,MAAM,4BAA4B,KAAK;AAC/C,cAAQ,KAAK,CAAC;AAAA,IAChB;AAAA,EACF,CAAC;AAEH,UACG,QAAQ,SAAS,EACjB,YAAY,oCAAoC,EAChD,SAAS,UAAU,qCAAqC,EACxD,OAAO,wBAAwB,6BAA6B,IAAI,EAChE,OAAO,iBAAiB,wBAAwB,EAChD,OAAO,OAAO,UAAkB,YAAY;AAC3C,QAAI;AACF,YAAM,WAAW,EAAE,SAAS,QAAQ,SAAS;AAC7C,YAAM,UAAU,MAAM,iBAAiB,UAAU,SAAS,QAAQ,KAAK,CAAC;AAExE,UAAI,QAAQ,WAAW,GAAG;AACxB,gBAAQ,IAAI,wBAAwB;AACpC;AAAA,MACF;AAEA,cAAQ,IAAI,SAAS,QAAQ,MAAM;AAAA,CAAmB;AACtD,cAAQ,QAAQ,CAAC,QAAQ,UAAU;AACjC,gBAAQ,IAAI,GAAG,QAAQ,CAAC,KAAK,OAAO,QAAQ,EAAE;AAC9C,gBAAQ,IAAI,kBAAkB,OAAO,MAAM,QAAQ,CAAC,CAAC,EAAE;AACvD,gBAAQ,IAAA;AAAA,MACV,CAAC;AAAA,IACH,SAAS,OAAO;AACd,cAAQ,MAAM,gCAAgC,KAAK;AACnD,cAAQ,KAAK,CAAC;AAAA,IAChB;AAAA,EACF,CAAC;AAEH,UACG,QAAQ,KAAK,EACb,YAAY,kBAAkB,EAC9B,SAAS,UAAU,uBAAuB,EAC1C,OAAO,wBAAwB,2BAA2B,EAC1D,OAAO,iBAAiB,wBAAwB,EAChD,OAAO,OAAO,UAAkB,YAAY;AAC3C,QAAI;AACF,YAAM,WAAW,EAAE,SAAS,QAAQ,SAAS;AAC7C,YAAM,UAAU,MAAM,eAAe,UAAU,QAAQ,MAAM;AAC7D,cAAQ,IAAI,OAAO;AAAA,IACrB,SAAS,OAAO;AACd,cAAQ,MAAM,+BAA+B,KAAK;AAClD,cAAQ,KAAK,CAAC;AAAA,IAChB;AAAA,EACF,CAAC;AAEH,UACG,QAAQ,OAAO,EACf,YAAY,kBAAkB,EAC9B,OAAO,iBAAiB,wBAAwB,EAChD,OAAO,OAAO,YAAY;AACzB,QAAI;AACF,YAAM,SAAS,MAAM,WAAW,EAAE,SAAS,QAAQ,SAAS;AAC5D,YAAM,eAAe,MAAM;AAAA,IAC7B,SAAS,OAAO;AACd,cAAQ,MAAM,8BAA8B,KAAK;AACjD,cAAQ,KAAK,CAAC;AAAA,IAChB;AAAA,EACF,CAAC;AAEH,UACG,QAAQ,QAAQ,EAChB,YAAY,sBAAsB,EAClC,OAAO,iBAAiB,wBAAwB,EAChD,OAAO,OAAO,YAAY;AACzB,QAAI;AACF,YAAM,WAAW,EAAE,SAAS,QAAQ,SAAS;AAC7C,YAAM,SAAS,MAAM,eAAA;AAErB,cAAQ,IAAI,iCAAiC;AAC7C,cAAQ,IAAI,uCAAuC;AACnD,cAAQ,IAAI,EAAE;AACd,cAAQ,IAAI,WAAW;AACvB,cAAQ,IAAI,OAAO,OAAO,kBAAkB,gCAAgC;AAC5E,cAAQ,IAAI,OAAO,OAAO,YAAY,sCAAsC;AAC5E,cAAQ,IAAI,OAAO,OAAO,aAAa,sCAAsC;AAC7E,cAAQ,IAAI,yBAAyB,OAAO,YAAY,EAAE;AAC1D,cAAQ,IAAI,6BAA6B,OAAO,eAAe,2BAA2B,EAAE;AAE5F,UAAI,OAAO,OAAO,SAAS,GAAG;AAC5B,gBAAQ,IAAI,sCAAsC,OAAO,OAAO,MAAM,EAAE;AACxE,YAAI,QAAQ,SAAS;AACnB,kBAAQ,IAAI,EAAE;AACd,kBAAQ,IAAI,gBAAgB;AAC5B,iBAAO,OAAO,MAAM,GAAG,CAAC,EAAE,QAAQ,CAAA,UAAS;AACzC,oBAAQ,IAAI,OAAO,KAAK,EAAE;AAAA,UAC5B,CAAC;AAAA,QACH;AAAA,MACF;AAEA,cAAQ,IAAI,EAAE;AACd,cAAQ,IAAI,sBAAsB;AAClC,UAAI,OAAO,YAAY,WAAW,GAAG;AACnC,gBAAQ,IAAI,yCAAyC;AACrD,gBAAQ,IAAI,2DAA2D;AAAA,MACzE,OAAO;AACL,eAAO,YAAY,QAAQ,CAAA,QAAO;AAChC,kBAAQ,IAAI,EAAE;AACd,kBAAQ,IAAI,gBAAgB,IAAI,IAAI,EAAE;AACtC,kBAAQ,IAAI,0BAA0B,IAAI,MAAM,EAAE;AAClD,kBAAQ,IAAI,0BAA0B,IAAI,UAAU,EAAE;AACtD,kBAAQ,IAAI,4BAA4B,IAAI,WAAW,EAAE;AACzD,kBAAQ,IAAI,uBAAuB,IAAI,eAAe,iBAAiB,EAAE;AACzE,cAAI,IAAI,OAAO,SAAS,GAAG;AACzB,oBAAQ,IAAI,4BAA4B,IAAI,OAAO,MAAM,EAAE;AAC3D,gBAAI,QAAQ,SAAS;AACnB,sBAAQ,IAAI,sBAAsB;AAClC,kBAAI,OAAO,MAAM,GAAG,CAAC,EAAE,QAAQ,CAAA,UAAS;AACtC,wBAAQ,IAAI,WAAW,KAAK,EAAE;AAAA,cAChC,CAAC;AAAA,YACH;AAAA,UACF;AAAA,QACF,CAAC;AAAA,MACH;AAEA,UAAI,CAAC,OAAO,kBAAkB,cAAc;AAC1C,gBAAQ,IAAI,EAAE;AACd,gBAAQ,IAAI,gBAAgB;AAC5B,eAAO,kBAAkB,OAAO,QAAQ,CAAA,UAAS;AAC/C,kBAAQ,IAAI,OAAO,KAAK,EAAE;AAAA,QAC5B,CAAC;AACD,gBAAQ,IAAI,EAAE;AACd,gBAAQ,IAAI,gFAAgF;AAAA,MAC9F,OAAO;AACL,gBAAQ,IAAI,EAAE;AACd,gBAAQ,IAAI,gBAAgB;AAC5B,gBAAQ,IAAI,2DAA2D;AAAA,MACzE;AAAA,IACF,SAAS,OAAO;AACd,cAAQ,MAAM,yBAAyB,KAAK;AAC5C,cAAQ,KAAK,CAAC;AAAA,IAChB;AAAA,EACF,CAAC;AAEH,QAAM,QAAQ,WAAA;AAChB;"}

package/dist/config.js

@@ -36,13 +36,13 @@ function loadConfig(options = {}) {
   const config = {
     storage: {
       sqlitePath: join(dataDir, dbFileName),
-      qdrantEndpoint: process.env.QDRANT_ENDPOINT || "http://localhost:6333",
+      qdrantEndpoint: process.env.QDRANT_ENDPOINT || "http://127.0.0.1:6333",
       qdrantCollection: process.env.DIRECTORY_INDEXER_QDRANT_COLLECTION || defaultCollection
     },
     embedding: {
       provider: process.env.EMBEDDING_PROVIDER || "ollama",
       model: process.env.EMBEDDING_MODEL || "nomic-embed-text",
-      endpoint: process.env.OLLAMA_ENDPOINT || "http://localhost:11434"
+      endpoint: process.env.OLLAMA_ENDPOINT || "http://127.0.0.1:11434"
     },
     indexing: {
       chunkSize: parseInt(process.env.CHUNK_SIZE || "512"),

package/dist/config.js.map

@@ -1 +1 @@
-{"version":3,"file":"config.js","sources":["../src/config.ts"],"sourcesContent":["import { homedir } from 'os';\nimport { join } from 'path';\nimport { z } from 'zod';\n\nconst ConfigSchema = z.object({\n  storage: z.object({\n    sqlitePath: z.string(),\n    qdrantEndpoint: z.string().url(),\n    qdrantCollection: z.string(),\n  }),\n  embedding: z.object({\n    provider: z.enum(['ollama', 'openai', 'mock']),\n    model: z.string(),\n    endpoint: z.string().url(),\n  }),\n  indexing: z.object({\n    chunkSize: z.number().positive(),\n    chunkOverlap: z.number().nonnegative(),\n    maxFileSize: z.number().positive(),\n    ignorePatterns: z.array(z.string()),\n  }),\n  dataDir: z.string(),\n  verbose: z.boolean(),\n});\n\nexport type Config = z.infer<typeof ConfigSchema>;\n\nexport class ConfigError extends Error {\n  constructor(message: string, public override cause?: Error) {\n    super(message);\n    this.name = 'ConfigError';\n  }\n}\n\nexport function loadConfig(options: { verbose?: boolean } = {}): Config {\n  const dataDir = process.env.DIRECTORY_INDEXER_DATA_DIR || join(homedir(), '.directory-indexer');\n  \n  // Use separate database file and collection for tests to avoid contaminating main data\n  const isTest = process.env.NODE_ENV === 'test' || process.env.VITEST === 'true';\n  const dbFileName = isTest ? 'test-data.db' : 'data.db';\n  const defaultCollection = isTest ? 'directory-indexer-test' : 'directory-indexer';\n  \n  const config = {\n    storage: {\n      sqlitePath: join(dataDir, dbFileName),\n      qdrantEndpoint: process.env.QDRANT_ENDPOINT || 'http://localhost:6333',\n      qdrantCollection: process.env.DIRECTORY_INDEXER_QDRANT_COLLECTION || defaultCollection,\n    },\n    embedding: {\n      provider: (process.env.EMBEDDING_PROVIDER as Config['embedding']['provider']) || 'ollama',\n      model: process.env.EMBEDDING_MODEL || 'nomic-embed-text',\n      endpoint: process.env.OLLAMA_ENDPOINT || 'http://localhost:11434',\n    },\n    indexing: {\n      chunkSize: parseInt(process.env.CHUNK_SIZE || '512'),\n      chunkOverlap: parseInt(process.env.CHUNK_OVERLAP || '50'),\n      maxFileSize: parseInt(process.env.MAX_FILE_SIZE || '10485760'),\n      ignorePatterns: ['.git', 'node_modules', 'target', '.DS_Store'],\n    },\n    dataDir,\n    verbose: options.verbose ?? (process.env.VERBOSE === 'true'),\n  };\n\n  try {\n    return ConfigSchema.parse(config);\n  } catch (error) {\n    if (error instanceof z.ZodError) {\n      const messages = error.errors.map(e => `${e.path.join('.')}: ${e.message}`);\n      throw new ConfigError(`Configuration validation failed: ${messages.join(', ')}`, error);\n    }\n    throw new ConfigError('Failed to load configuration', error as Error);\n  }\n}"],"names":[],"mappings":";;;AAIA,MAAM,eAAe,EAAE,OAAO;AAAA,EAC5B,SAAS,EAAE,OAAO;AAAA,IAChB,YAAY,EAAE,OAAA;AAAA,IACd,gBAAgB,EAAE,OAAA,EAAS,IAAA;AAAA,IAC3B,kBAAkB,EAAE,OAAA;AAAA,EAAO,CAC5B;AAAA,EACD,WAAW,EAAE,OAAO;AAAA,IAClB,UAAU,EAAE,KAAK,CAAC,UAAU,UAAU,MAAM,CAAC;AAAA,IAC7C,OAAO,EAAE,OAAA;AAAA,IACT,UAAU,EAAE,OAAA,EAAS,IAAA;AAAA,EAAI,CAC1B;AAAA,EACD,UAAU,EAAE,OAAO;AAAA,IACjB,WAAW,EAAE,OAAA,EAAS,SAAA;AAAA,IACtB,cAAc,EAAE,OAAA,EAAS,YAAA;AAAA,IACzB,aAAa,EAAE,OAAA,EAAS,SAAA;AAAA,IACxB,gBAAgB,EAAE,MAAM,EAAE,QAAQ;AAAA,EAAA,CACnC;AAAA,EACD,SAAS,EAAE,OAAA;AAAA,EACX,SAAS,EAAE,QAAA;AACb,CAAC;AAIM,MAAM,oBAAoB,MAAM;AAAA,EACrC,YAAY,SAAiC,OAAe;AAC1D,UAAM,OAAO;AAD8B,SAAA,QAAA;AAE3C,SAAK,OAAO;AAAA,EACd;AACF;AAEO,SAAS,WAAW,UAAiC,IAAY;AACtE,QAAM,UAAU,QAAQ,IAAI,8BAA8B,KAAK,QAAA,GAAW,oBAAoB;AAG9F,QAAM,SAAS,QAAQ,IAAI,aAAa,UAAU,QAAQ,IAAI,WAAW;AACzE,QAAM,aAAa,SAAS,iBAAiB;AAC7C,QAAM,oBAAoB,SAAS,2BAA2B;AAE9D,QAAM,SAAS;AAAA,IACb,SAAS;AAAA,MACP,YAAY,KAAK,SAAS,UAAU;AAAA,MACpC,gBAAgB,QAAQ,IAAI,mBAAmB;AAAA,MAC/C,kBAAkB,QAAQ,IAAI,uCAAuC;AAAA,IAAA;AAAA,IAEvE,WAAW;AAAA,MACT,UAAW,QAAQ,IAAI,sBAA0D;AAAA,MACjF,OAAO,QAAQ,IAAI,mBAAmB;AAAA,MACtC,UAAU,QAAQ,IAAI,mBAAmB;AAAA,IAAA;AAAA,IAE3C,UAAU;AAAA,MACR,WAAW,SAAS,QAAQ,IAAI,cAAc,KAAK;AAAA,MACnD,cAAc,SAAS,QAAQ,IAAI,iBAAiB,IAAI;AAAA,MACxD,aAAa,SAAS,QAAQ,IAAI,iBAAiB,UAAU;AAAA,MAC7D,gBAAgB,CAAC,QAAQ,gBAAgB,UAAU,WAAW;AAAA,IAAA;AAAA,IAEhE;AAAA,IACA,SAAS,QAAQ,WAAY,QAAQ,IAAI,YAAY;AAAA,EAAA;AAGvD,MAAI;AACF,WAAO,aAAa,MAAM,MAAM;AAAA,EAClC,SAAS,OAAO;AACd,QAAI,iBAAiB,EAAE,UAAU;AAC/B,YAAM,WAAW,MAAM,OAAO,IAAI,OAAK,GAAG,EAAE,KAAK,KAAK,GAAG,CAAC,KAAK,EAAE,OAAO,EAAE;AAC1E,YAAM,IAAI,YAAY,oCAAoC,SAAS,KAAK,IAAI,CAAC,IAAI,KAAK;AAAA,IACxF;AACA,UAAM,IAAI,YAAY,gCAAgC,KAAc;AAAA,EACtE;AACF;"}
+{"version":3,"file":"config.js","sources":["../src/config.ts"],"sourcesContent":["import { homedir } from 'os';\nimport { join } from 'path';\nimport { z } from 'zod';\n\nconst ConfigSchema = z.object({\n  storage: z.object({\n    sqlitePath: z.string(),\n    qdrantEndpoint: z.string().url(),\n    qdrantCollection: z.string(),\n  }),\n  embedding: z.object({\n    provider: z.enum(['ollama', 'openai', 'mock']),\n    model: z.string(),\n    endpoint: z.string().url(),\n  }),\n  indexing: z.object({\n    chunkSize: z.number().positive(),\n    chunkOverlap: z.number().nonnegative(),\n    maxFileSize: z.number().positive(),\n    ignorePatterns: z.array(z.string()),\n  }),\n  dataDir: z.string(),\n  verbose: z.boolean(),\n});\n\nexport type Config = z.infer<typeof ConfigSchema>;\n\nexport class ConfigError extends Error {\n  constructor(message: string, public override cause?: Error) {\n    super(message);\n    this.name = 'ConfigError';\n  }\n}\n\nexport function loadConfig(options: { verbose?: boolean } = {}): Config {\n  const dataDir = process.env.DIRECTORY_INDEXER_DATA_DIR || join(homedir(), '.directory-indexer');\n  \n  // Use separate database file and collection for tests to avoid contaminating main data\n  const isTest = process.env.NODE_ENV === 'test' || process.env.VITEST === 'true';\n  const dbFileName = isTest ? 'test-data.db' : 'data.db';\n  const defaultCollection = isTest ? 'directory-indexer-test' : 'directory-indexer';\n  \n  const config = {\n    storage: {\n      sqlitePath: join(dataDir, dbFileName),\n      qdrantEndpoint: process.env.QDRANT_ENDPOINT || 'http://127.0.0.1:6333',\n      qdrantCollection: process.env.DIRECTORY_INDEXER_QDRANT_COLLECTION || defaultCollection,\n    },\n    embedding: {\n      provider: (process.env.EMBEDDING_PROVIDER as Config['embedding']['provider']) || 'ollama',\n      model: process.env.EMBEDDING_MODEL || 'nomic-embed-text',\n      endpoint: process.env.OLLAMA_ENDPOINT || 'http://127.0.0.1:11434',\n    },\n    indexing: {\n      chunkSize: parseInt(process.env.CHUNK_SIZE || '512'),\n      chunkOverlap: parseInt(process.env.CHUNK_OVERLAP || '50'),\n      maxFileSize: parseInt(process.env.MAX_FILE_SIZE || '10485760'),\n      ignorePatterns: ['.git', 'node_modules', 'target', '.DS_Store'],\n    },\n    dataDir,\n    verbose: options.verbose ?? (process.env.VERBOSE === 'true'),\n  };\n\n  try {\n    return ConfigSchema.parse(config);\n  } catch (error) {\n    if (error instanceof z.ZodError) {\n      const messages = error.errors.map(e => `${e.path.join('.')}: ${e.message}`);\n      throw new ConfigError(`Configuration validation failed: ${messages.join(', ')}`, error);\n    }\n    throw new ConfigError('Failed to load configuration', error as Error);\n  }\n}"],"names":[],"mappings":";;;AAIA,MAAM,eAAe,EAAE,OAAO;AAAA,EAC5B,SAAS,EAAE,OAAO;AAAA,IAChB,YAAY,EAAE,OAAA;AAAA,IACd,gBAAgB,EAAE,OAAA,EAAS,IAAA;AAAA,IAC3B,kBAAkB,EAAE,OAAA;AAAA,EAAO,CAC5B;AAAA,EACD,WAAW,EAAE,OAAO;AAAA,IAClB,UAAU,EAAE,KAAK,CAAC,UAAU,UAAU,MAAM,CAAC;AAAA,IAC7C,OAAO,EAAE,OAAA;AAAA,IACT,UAAU,EAAE,OAAA,EAAS,IAAA;AAAA,EAAI,CAC1B;AAAA,EACD,UAAU,EAAE,OAAO;AAAA,IACjB,WAAW,EAAE,OAAA,EAAS,SAAA;AAAA,IACtB,cAAc,EAAE,OAAA,EAAS,YAAA;AAAA,IACzB,aAAa,EAAE,OAAA,EAAS,SAAA;AAAA,IACxB,gBAAgB,EAAE,MAAM,EAAE,QAAQ;AAAA,EAAA,CACnC;AAAA,EACD,SAAS,EAAE,OAAA;AAAA,EACX,SAAS,EAAE,QAAA;AACb,CAAC;AAIM,MAAM,oBAAoB,MAAM;AAAA,EACrC,YAAY,SAAiC,OAAe;AAC1D,UAAM,OAAO;AAD8B,SAAA,QAAA;AAE3C,SAAK,OAAO;AAAA,EACd;AACF;AAEO,SAAS,WAAW,UAAiC,IAAY;AACtE,QAAM,UAAU,QAAQ,IAAI,8BAA8B,KAAK,QAAA,GAAW,oBAAoB;AAG9F,QAAM,SAAS,QAAQ,IAAI,aAAa,UAAU,QAAQ,IAAI,WAAW;AACzE,QAAM,aAAa,SAAS,iBAAiB;AAC7C,QAAM,oBAAoB,SAAS,2BAA2B;AAE9D,QAAM,SAAS;AAAA,IACb,SAAS;AAAA,MACP,YAAY,KAAK,SAAS,UAAU;AAAA,MACpC,gBAAgB,QAAQ,IAAI,mBAAmB;AAAA,MAC/C,kBAAkB,QAAQ,IAAI,uCAAuC;AAAA,IAAA;AAAA,IAEvE,WAAW;AAAA,MACT,UAAW,QAAQ,IAAI,sBAA0D;AAAA,MACjF,OAAO,QAAQ,IAAI,mBAAmB;AAAA,MACtC,UAAU,QAAQ,IAAI,mBAAmB;AAAA,IAAA;AAAA,IAE3C,UAAU;AAAA,MACR,WAAW,SAAS,QAAQ,IAAI,cAAc,KAAK;AAAA,MACnD,cAAc,SAAS,QAAQ,IAAI,iBAAiB,IAAI;AAAA,MACxD,aAAa,SAAS,QAAQ,IAAI,iBAAiB,UAAU;AAAA,MAC7D,gBAAgB,CAAC,QAAQ,gBAAgB,UAAU,WAAW;AAAA,IAAA;AAAA,IAEhE;AAAA,IACA,SAAS,QAAQ,WAAY,QAAQ,IAAI,YAAY;AAAA,EAAA;AAGvD,MAAI;AACF,WAAO,aAAa,MAAM,MAAM;AAAA,EAClC,SAAS,OAAO;AACd,QAAI,iBAAiB,EAAE,UAAU;AAC/B,YAAM,WAAW,MAAM,OAAO,IAAI,OAAK,GAAG,EAAE,KAAK,KAAK,GAAG,CAAC,KAAK,EAAE,OAAO,EAAE;AAC1E,YAAM,IAAI,YAAY,oCAAoC,SAAS,KAAK,IAAI,CAAC,IAAI,KAAK;AAAA,IACxF;AACA,UAAM,IAAI,YAAY,gCAAgC,KAAc;AAAA,EACtE;AACF;"}

package/dist/indexing.js

@@ -120,6 +120,23 @@ async function indexDirectories(paths, config) {
     maxFileSize: config.indexing.maxFileSize
   };
   const { sqlite, qdrant } = await initializeStorage(config);
+  let totalFiles = 0;
+  for (const path of paths) {
+    try {
+      if (config.verbose) {
+        console.log(`Scanning directory: ${path}`);
+      }
+      const files = await scanDirectory(path, scanOptions);
+      totalFiles += files.length;
+      if (config.verbose) {
+        console.log(`Found ${files.length} files to process in ${path}`);
+      }
+    } catch {
+    }
+  }
+  if (!config.verbose && totalFiles > 0) {
+    console.log(`Processing ${totalFiles} files...`);
+  }
   for (const path of paths) {
     try {
       const normalizedPath = normalizePath(path);
@@ -158,6 +175,9 @@ async function indexDirectories(paths, config) {
             await qdrant.upsertPoints([point]);
           }
           indexed++;
+          if (config.verbose) {
+            console.log(`  Indexed: ${file.path} (${chunks.length} chunks)`);
+          }
         } catch (error) {
           const errorMessage = error instanceof Error ? error.message : String(error);
           const causeMessage = error instanceof Error && error.cause ? `: ${error.cause.message}` : "";

package/dist/indexing.js.map

@@ -1 +1 @@
-{"version":3,"file":"indexing.js","sources":["../src/indexing.ts"],"sourcesContent":["import { promises as fs } from 'fs';\nimport { join } from 'path';\nimport { Config } from './config.js';\nimport { \n  FileInfo, \n  ChunkInfo, \n  normalizePath, \n  getFileInfo, \n  shouldIgnoreFile, \n  isSupportedFileType,\n  isDirectory,\n  isFile\n} from './utils.js';\nimport { generateEmbedding } from './embedding.js';\nimport { initializeStorage, FileRecord } from './storage.js';\n\nexport interface ScanOptions {\n  ignorePatterns: string[];\n  maxFileSize: number;\n}\n\nexport interface IndexResult {\n  indexed: number;\n  skipped: number;\n  errors: string[];\n}\n\nexport class IndexingError extends Error {\n  constructor(message: string, public override cause?: Error) {\n    super(message);\n    this.name = 'IndexingError';\n  }\n}\n\nexport function chunkText(content: string, chunkSize: number, overlap: number): ChunkInfo[] {\n  if (content.length <= chunkSize) {\n    return [{\n      id: '0',\n      content,\n      startIndex: 0,\n      endIndex: content.length\n    }];\n  }\n  \n  const chunks: ChunkInfo[] = [];\n  let startIndex = 0;\n  let chunkId = 0;\n  \n  while (startIndex < content.length) {\n    const endIndex = Math.min(startIndex + chunkSize, content.length);\n    const chunkContent = content.slice(startIndex, endIndex);\n    \n    chunks.push({\n      id: chunkId.toString(),\n      content: chunkContent,\n      startIndex,\n      endIndex\n    });\n    \n    chunkId++;\n    const nextStart = endIndex - overlap;\n    \n    if (nextStart <= startIndex) {\n      startIndex = startIndex + Math.max(1, chunkSize - overlap);\n    } else {\n      startIndex = nextStart;\n    }\n    \n    if (startIndex >= content.length) break;\n  }\n  \n  return chunks;\n}\n\nexport async function scanDirectory(dirPath: string, options: ScanOptions): Promise<FileInfo[]> {\n  const files: FileInfo[] = [];\n  const visited = new Set<string>();\n  \n  async function walkDirectory(currentPath: string): Promise<void> {\n    const normalizedPath = normalizePath(currentPath);\n    \n    if (visited.has(normalizedPath)) {\n      return;\n    }\n    visited.add(normalizedPath);\n    \n    try {\n      if (shouldIgnoreFile(normalizedPath, options.ignorePatterns)) {\n        return;\n      }\n      \n      if (await isDirectory(normalizedPath)) {\n        const entries = await fs.readdir(normalizedPath);\n        \n        for (const entry of entries) {\n          const fullPath = join(normalizedPath, entry);\n          await walkDirectory(fullPath);\n        }\n      } else if (await isFile(normalizedPath)) {\n        if (!isSupportedFileType(normalizedPath)) {\n          return;\n        }\n        \n        const stats = await fs.stat(normalizedPath);\n        if (stats.size > options.maxFileSize) {\n          return;\n        }\n        \n        const fileInfo = await getFileInfo(normalizedPath);\n        files.push(fileInfo);\n      }\n    } catch (error) {\n      throw new IndexingError(`Failed to scan directory: ${normalizedPath}`, error as Error);\n    }\n  }\n  \n  await walkDirectory(dirPath);\n  return files;\n}\n\nexport async function getFileMetadata(filePath: string): Promise<FileInfo> {\n  try {\n    return await getFileInfo(filePath);\n  } catch (error) {\n    throw new IndexingError(`Failed to get file metadata`, error as Error);\n  }\n}\n\nasync function shouldReprocessFile(filePath: string, existingRecord: FileRecord, config: Config): Promise<boolean> {\n  try {\n    const fs = await import('fs/promises');\n    \n    // Try modtime check first (fast path)\n    const currentStats = await fs.stat(filePath);\n    const existingModTime = new Date(existingRecord.modifiedTime);\n    \n    // If modtime is clearly older, likely unchanged\n    if (currentStats.mtime <= existingModTime) {\n      return false; // Skip processing\n    }\n    \n    // If modtime suggests change, verify with hash\n    const currentFileInfo = await getFileInfo(filePath);\n    return currentFileInfo.hash !== existingRecord.hash;\n    \n  } catch (modtimeError) {\n    // Graceful fallback: skip modtime, use hash only\n    if (config.verbose) {\n      console.log(`Warning: Could not check modification time for ${filePath}:`, modtimeError);\n    }\n    try {\n      const currentFileInfo = await getFileInfo(filePath);\n      return currentFileInfo.hash !== existingRecord.hash;\n    } catch (hashError) {\n      // If we can't hash either, assume changed to be safe\n      if (config.verbose) {\n        console.log(`Warning: Could not compute hash for ${filePath}:`, hashError);\n      }\n      return true;\n    }\n  }\n}\n\nexport async function indexDirectories(paths: string[], config: Config): Promise<IndexResult> {\n  let indexed = 0;\n  let skipped = 0;\n  const errors: string[] = [];\n  \n  const scanOptions: ScanOptions = {\n    ignorePatterns: config.indexing.ignorePatterns,\n    maxFileSize: config.indexing.maxFileSize\n  };\n  \n  // Initialize storage\n  const { sqlite, qdrant } = await initializeStorage(config);\n  \n  for (const path of paths) {\n    try {\n      // Mark directory as indexing\n      const normalizedPath = normalizePath(path);\n      await sqlite.upsertDirectory(normalizedPath, 'indexing');\n      \n      const files = await scanDirectory(path, scanOptions);\n      \n      for (const file of files) {\n        try {\n          // Check if file already exists and needs reprocessing\n          const existingFile = await sqlite.getFile(file.path);\n          \n          if (existingFile) {\n            const needsReprocessing = await shouldReprocessFile(file.path, existingFile, config);\n            if (!needsReprocessing) {\n              skipped++;\n              continue; // Skip unchanged file\n            }\n            \n            // File changed - clean up old vectors first\n            await qdrant.deletePointsByFileHash(existingFile.hash);\n          }\n          \n          const content = await fs.readFile(file.path, 'utf-8');\n          const chunks = chunkText(content, config.indexing.chunkSize, config.indexing.chunkOverlap);\n          \n          // Store file metadata in SQLite\n          await sqlite.upsertFile(file, chunks);\n          \n          // Generate embeddings and store in Qdrant\n          for (let i = 0; i < chunks.length; i++) {\n            const chunk = chunks[i];\n            const embedding = await generateEmbedding(chunk.content, config);\n            // Generate a unique integer ID by combining hash and chunk index\n            const hashNum = parseInt(file.hash.slice(0, 8), 16);\n            const pointId = (hashNum % 1000000) * 1000 + parseInt(chunk.id);\n            const point = {\n              id: pointId,\n              vector: embedding,\n              payload: {\n                filePath: file.path,\n                chunkId: chunk.id,\n                fileHash: file.hash,\n                content: chunk.content,\n                parentDirectories: file.parentDirs\n              }\n            };\n            await qdrant.upsertPoints([point]);\n          }\n          \n          indexed++;\n        } catch (error) {\n          const errorMessage = error instanceof Error ? error.message : String(error);\n          const causeMessage = error instanceof Error && error.cause ? `: ${(error.cause as Error).message}` : '';\n          errors.push(`Failed to process ${file.path}: ${errorMessage}${causeMessage}`);\n        }\n      }\n      \n      // Mark directory as completed if no errors for this directory\n      const directoryErrors = errors.filter(err => err.includes(path));\n      const directoryStatus = directoryErrors.length > 0 ? 'failed' : 'completed';\n      await sqlite.upsertDirectory(normalizedPath, directoryStatus);\n      \n    } catch (error) {\n      const normalizedPath = normalizePath(path);\n      await sqlite.upsertDirectory(normalizedPath, 'failed');\n      errors.push(`Failed to scan directory ${path}: ${(error as Error).message}`);\n    }\n  }\n  \n  return { indexed, skipped, errors };\n}"],"names":["fs"],"mappings":";;;;;AA2BO,MAAM,sBAAsB,MAAM;AAAA,EACvC,YAAY,SAAiC,OAAe;AAC1D,UAAM,OAAO;AAD8B,SAAA,QAAA;AAE3C,SAAK,OAAO;AAAA,EACd;AACF;AAEO,SAAS,UAAU,SAAiB,WAAmB,SAA8B;AAC1F,MAAI,QAAQ,UAAU,WAAW;AAC/B,WAAO,CAAC;AAAA,MACN,IAAI;AAAA,MACJ;AAAA,MACA,YAAY;AAAA,MACZ,UAAU,QAAQ;AAAA,IAAA,CACnB;AAAA,EACH;AAEA,QAAM,SAAsB,CAAA;AAC5B,MAAI,aAAa;AACjB,MAAI,UAAU;AAEd,SAAO,aAAa,QAAQ,QAAQ;AAClC,UAAM,WAAW,KAAK,IAAI,aAAa,WAAW,QAAQ,MAAM;AAChE,UAAM,eAAe,QAAQ,MAAM,YAAY,QAAQ;AAEvD,WAAO,KAAK;AAAA,MACV,IAAI,QAAQ,SAAA;AAAA,MACZ,SAAS;AAAA,MACT;AAAA,MACA;AAAA,IAAA,CACD;AAED;AACA,UAAM,YAAY,WAAW;AAE7B,QAAI,aAAa,YAAY;AAC3B,mBAAa,aAAa,KAAK,IAAI,GAAG,YAAY,OAAO;AAAA,IAC3D,OAAO;AACL,mBAAa;AAAA,IACf;AAEA,QAAI,cAAc,QAAQ,OAAQ;AAAA,EACpC;AAEA,SAAO;AACT;AAEA,eAAsB,cAAc,SAAiB,SAA2C;AAC9F,QAAM,QAAoB,CAAA;AAC1B,QAAM,8BAAc,IAAA;AAEpB,iBAAe,cAAc,aAAoC;AAC/D,UAAM,iBAAiB,cAAc,WAAW;AAEhD,QAAI,QAAQ,IAAI,cAAc,GAAG;AAC/B;AAAA,IACF;AACA,YAAQ,IAAI,cAAc;AAE1B,QAAI;AACF,UAAI,iBAAiB,gBAAgB,QAAQ,cAAc,GAAG;AAC5D;AAAA,MACF;AAEA,UAAI,MAAM,YAAY,cAAc,GAAG;AACrC,cAAM,UAAU,MAAMA,SAAG,QAAQ,cAAc;AAE/C,mBAAW,SAAS,SAAS;AAC3B,gBAAM,WAAW,KAAK,gBAAgB,KAAK;AAC3C,gBAAM,cAAc,QAAQ;AAAA,QAC9B;AAAA,MACF,WAAW,MAAM,OAAO,cAAc,GAAG;AACvC,YAAI,CAAC,oBAAoB,cAAc,GAAG;AACxC;AAAA,QACF;AAEA,cAAM,QAAQ,MAAMA,SAAG,KAAK,cAAc;AAC1C,YAAI,MAAM,OAAO,QAAQ,aAAa;AACpC;AAAA,QACF;AAEA,cAAM,WAAW,MAAM,YAAY,cAAc;AACjD,cAAM,KAAK,QAAQ;AAAA,MACrB;AAAA,IACF,SAAS,OAAO;AACd,YAAM,IAAI,cAAc,6BAA6B,cAAc,IAAI,KAAc;AAAA,IACvF;AAAA,EACF;AAEA,QAAM,cAAc,OAAO;AAC3B,SAAO;AACT;AAEA,eAAsB,gBAAgB,UAAqC;AACzE,MAAI;AACF,WAAO,MAAM,YAAY,QAAQ;AAAA,EACnC,SAAS,OAAO;AACd,UAAM,IAAI,cAAc,+BAA+B,KAAc;AAAA,EACvE;AACF;AAEA,eAAe,oBAAoB,UAAkB,gBAA4B,QAAkC;AACjH,MAAI;AACF,UAAMA,MAAK,MAAM,OAAO,aAAa;AAGrC,UAAM,eAAe,MAAMA,IAAG,KAAK,QAAQ;AAC3C,UAAM,kBAAkB,IAAI,KAAK,eAAe,YAAY;AAG5D,QAAI,aAAa,SAAS,iBAAiB;AACzC,aAAO;AAAA,IACT;AAGA,UAAM,kBAAkB,MAAM,YAAY,QAAQ;AAClD,WAAO,gBAAgB,SAAS,eAAe;AAAA,EAEjD,SAAS,cAAc;AAErB,QAAI,OAAO,SAAS;AAClB,cAAQ,IAAI,kDAAkD,QAAQ,KAAK,YAAY;AAAA,IACzF;AACA,QAAI;AACF,YAAM,kBAAkB,MAAM,YAAY,QAAQ;AAClD,aAAO,gBAAgB,SAAS,eAAe;AAAA,IACjD,SAAS,WAAW;AAElB,UAAI,OAAO,SAAS;AAClB,gBAAQ,IAAI,uCAAuC,QAAQ,KAAK,SAAS;AAAA,MAC3E;AACA,aAAO;AAAA,IACT;AAAA,EACF;AACF;AAEA,eAAsB,iBAAiB,OAAiB,QAAsC;AAC5F,MAAI,UAAU;AACd,MAAI,UAAU;AACd,QAAM,SAAmB,CAAA;AAEzB,QAAM,cAA2B;AAAA,IAC/B,gBAAgB,OAAO,SAAS;AAAA,IAChC,aAAa,OAAO,SAAS;AAAA,EAAA;AAI/B,QAAM,EAAE,QAAQ,OAAA,IAAW,MAAM,kBAAkB,MAAM;AAEzD,aAAW,QAAQ,OAAO;AACxB,QAAI;AAEF,YAAM,iBAAiB,cAAc,IAAI;AACzC,YAAM,OAAO,gBAAgB,gBAAgB,UAAU;AAEvD,YAAM,QAAQ,MAAM,cAAc,MAAM,WAAW;AAEnD,iBAAW,QAAQ,OAAO;AACxB,YAAI;AAEF,gBAAM,eAAe,MAAM,OAAO,QAAQ,KAAK,IAAI;AAEnD,cAAI,cAAc;AAChB,kBAAM,oBAAoB,MAAM,oBAAoB,KAAK,MAAM,cAAc,MAAM;AACnF,gBAAI,CAAC,mBAAmB;AACtB;AACA;AAAA,YACF;AAGA,kBAAM,OAAO,uBAAuB,aAAa,IAAI;AAAA,UACvD;AAEA,gBAAM,UAAU,MAAMA,SAAG,SAAS,KAAK,MAAM,OAAO;AACpD,gBAAM,SAAS,UAAU,SAAS,OAAO,SAAS,WAAW,OAAO,SAAS,YAAY;AAGzF,gBAAM,OAAO,WAAW,MAAM,MAAM;AAGpC,mBAAS,IAAI,GAAG,IAAI,OAAO,QAAQ,KAAK;AACtC,kBAAM,QAAQ,OAAO,CAAC;AACtB,kBAAM,YAAY,MAAM,kBAAkB,MAAM,SAAS,MAAM;AAE/D,kBAAM,UAAU,SAAS,KAAK,KAAK,MAAM,GAAG,CAAC,GAAG,EAAE;AAClD,kBAAM,UAAW,UAAU,MAAW,MAAO,SAAS,MAAM,EAAE;AAC9D,kBAAM,QAAQ;AAAA,cACZ,IAAI;AAAA,cACJ,QAAQ;AAAA,cACR,SAAS;AAAA,gBACP,UAAU,KAAK;AAAA,gBACf,SAAS,MAAM;AAAA,gBACf,UAAU,KAAK;AAAA,gBACf,SAAS,MAAM;AAAA,gBACf,mBAAmB,KAAK;AAAA,cAAA;AAAA,YAC1B;AAEF,kBAAM,OAAO,aAAa,CAAC,KAAK,CAAC;AAAA,UACnC;AAEA;AAAA,QACF,SAAS,OAAO;AACd,gBAAM,eAAe,iBAAiB,QAAQ,MAAM,UAAU,OAAO,KAAK;AAC1E,gBAAM,eAAe,iBAAiB,SAAS,MAAM,QAAQ,KAAM,MAAM,MAAgB,OAAO,KAAK;AACrG,iBAAO,KAAK,qBAAqB,KAAK,IAAI,KAAK,YAAY,GAAG,YAAY,EAAE;AAAA,QAC9E;AAAA,MACF;AAGA,YAAM,kBAAkB,OAAO,OAAO,SAAO,IAAI,SAAS,IAAI,CAAC;AAC/D,YAAM,kBAAkB,gBAAgB,SAAS,IAAI,WAAW;AAChE,YAAM,OAAO,gBAAgB,gBAAgB,eAAe;AAAA,IAE9D,SAAS,OAAO;AACd,YAAM,iBAAiB,cAAc,IAAI;AACzC,YAAM,OAAO,gBAAgB,gBAAgB,QAAQ;AACrD,aAAO,KAAK,4BAA4B,IAAI,KAAM,MAAgB,OAAO,EAAE;AAAA,IAC7E;AAAA,EACF;AAEA,SAAO,EAAE,SAAS,SAAS,OAAA;AAC7B;"}
+{"version":3,"file":"indexing.js","sources":["../src/indexing.ts"],"sourcesContent":["import { promises as fs } from 'fs';\nimport { join } from 'path';\nimport { Config } from './config.js';\nimport { \n  FileInfo, \n  ChunkInfo, \n  normalizePath, \n  getFileInfo, \n  shouldIgnoreFile, \n  isSupportedFileType,\n  isDirectory,\n  isFile\n} from './utils.js';\nimport { generateEmbedding } from './embedding.js';\nimport { initializeStorage, FileRecord } from './storage.js';\n\nexport interface ScanOptions {\n  ignorePatterns: string[];\n  maxFileSize: number;\n}\n\nexport interface IndexResult {\n  indexed: number;\n  skipped: number;\n  errors: string[];\n}\n\nexport class IndexingError extends Error {\n  constructor(message: string, public override cause?: Error) {\n    super(message);\n    this.name = 'IndexingError';\n  }\n}\n\nexport function chunkText(content: string, chunkSize: number, overlap: number): ChunkInfo[] {\n  if (content.length <= chunkSize) {\n    return [{\n      id: '0',\n      content,\n      startIndex: 0,\n      endIndex: content.length\n    }];\n  }\n  \n  const chunks: ChunkInfo[] = [];\n  let startIndex = 0;\n  let chunkId = 0;\n  \n  while (startIndex < content.length) {\n    const endIndex = Math.min(startIndex + chunkSize, content.length);\n    const chunkContent = content.slice(startIndex, endIndex);\n    \n    chunks.push({\n      id: chunkId.toString(),\n      content: chunkContent,\n      startIndex,\n      endIndex\n    });\n    \n    chunkId++;\n    const nextStart = endIndex - overlap;\n    \n    if (nextStart <= startIndex) {\n      startIndex = startIndex + Math.max(1, chunkSize - overlap);\n    } else {\n      startIndex = nextStart;\n    }\n    \n    if (startIndex >= content.length) break;\n  }\n  \n  return chunks;\n}\n\nexport async function scanDirectory(dirPath: string, options: ScanOptions): Promise<FileInfo[]> {\n  const files: FileInfo[] = [];\n  const visited = new Set<string>();\n  \n  async function walkDirectory(currentPath: string): Promise<void> {\n    const normalizedPath = normalizePath(currentPath);\n    \n    if (visited.has(normalizedPath)) {\n      return;\n    }\n    visited.add(normalizedPath);\n    \n    try {\n      if (shouldIgnoreFile(normalizedPath, options.ignorePatterns)) {\n        return;\n      }\n      \n      if (await isDirectory(normalizedPath)) {\n        const entries = await fs.readdir(normalizedPath);\n        \n        for (const entry of entries) {\n          const fullPath = join(normalizedPath, entry);\n          await walkDirectory(fullPath);\n        }\n      } else if (await isFile(normalizedPath)) {\n        if (!isSupportedFileType(normalizedPath)) {\n          return;\n        }\n        \n        const stats = await fs.stat(normalizedPath);\n        if (stats.size > options.maxFileSize) {\n          return;\n        }\n        \n        const fileInfo = await getFileInfo(normalizedPath);\n        files.push(fileInfo);\n      }\n    } catch (error) {\n      throw new IndexingError(`Failed to scan directory: ${normalizedPath}`, error as Error);\n    }\n  }\n  \n  await walkDirectory(dirPath);\n  return files;\n}\n\nexport async function getFileMetadata(filePath: string): Promise<FileInfo> {\n  try {\n    return await getFileInfo(filePath);\n  } catch (error) {\n    throw new IndexingError(`Failed to get file metadata`, error as Error);\n  }\n}\n\nasync function shouldReprocessFile(filePath: string, existingRecord: FileRecord, config: Config): Promise<boolean> {\n  try {\n    const fs = await import('fs/promises');\n    \n    // Try modtime check first (fast path)\n    const currentStats = await fs.stat(filePath);\n    const existingModTime = new Date(existingRecord.modifiedTime);\n    \n    // If modtime is clearly older, likely unchanged\n    if (currentStats.mtime <= existingModTime) {\n      return false; // Skip processing\n    }\n    \n    // If modtime suggests change, verify with hash\n    const currentFileInfo = await getFileInfo(filePath);\n    return currentFileInfo.hash !== existingRecord.hash;\n    \n  } catch (modtimeError) {\n    // Graceful fallback: skip modtime, use hash only\n    if (config.verbose) {\n      console.log(`Warning: Could not check modification time for ${filePath}:`, modtimeError);\n    }\n    try {\n      const currentFileInfo = await getFileInfo(filePath);\n      return currentFileInfo.hash !== existingRecord.hash;\n    } catch (hashError) {\n      // If we can't hash either, assume changed to be safe\n      if (config.verbose) {\n        console.log(`Warning: Could not compute hash for ${filePath}:`, hashError);\n      }\n      return true;\n    }\n  }\n}\n\nexport async function indexDirectories(paths: string[], config: Config): Promise<IndexResult> {\n  let indexed = 0;\n  let skipped = 0;\n  const errors: string[] = [];\n  \n  const scanOptions: ScanOptions = {\n    ignorePatterns: config.indexing.ignorePatterns,\n    maxFileSize: config.indexing.maxFileSize\n  };\n  \n  // Initialize storage\n  const { sqlite, qdrant } = await initializeStorage(config);\n  \n  // First pass: scan all directories to get total file count\n  let totalFiles = 0;\n  for (const path of paths) {\n    try {\n      if (config.verbose) {\n        console.log(`Scanning directory: ${path}`);\n      }\n      const files = await scanDirectory(path, scanOptions);\n      totalFiles += files.length;\n      if (config.verbose) {\n        console.log(`Found ${files.length} files to process in ${path}`);\n      }\n    } catch {\n      // Continue with other directories even if one fails to scan\n    }\n  }\n  \n  if (!config.verbose && totalFiles > 0) {\n    console.log(`Processing ${totalFiles} files...`);\n  }\n  \n  for (const path of paths) {\n    try {\n      // Mark directory as indexing\n      const normalizedPath = normalizePath(path);\n      await sqlite.upsertDirectory(normalizedPath, 'indexing');\n      \n      const files = await scanDirectory(path, scanOptions);\n      \n      for (const file of files) {\n        try {\n          // Check if file already exists and needs reprocessing\n          const existingFile = await sqlite.getFile(file.path);\n          \n          if (existingFile) {\n            const needsReprocessing = await shouldReprocessFile(file.path, existingFile, config);\n            if (!needsReprocessing) {\n              skipped++;\n              continue; // Skip unchanged file\n            }\n            \n            // File changed - clean up old vectors first\n            await qdrant.deletePointsByFileHash(existingFile.hash);\n          }\n          \n          const content = await fs.readFile(file.path, 'utf-8');\n          const chunks = chunkText(content, config.indexing.chunkSize, config.indexing.chunkOverlap);\n          \n          // Store file metadata in SQLite\n          await sqlite.upsertFile(file, chunks);\n          \n          // Generate embeddings and store in Qdrant\n          for (let i = 0; i < chunks.length; i++) {\n            const chunk = chunks[i];\n            const embedding = await generateEmbedding(chunk.content, config);\n            // Generate a unique integer ID by combining hash and chunk index\n            const hashNum = parseInt(file.hash.slice(0, 8), 16);\n            const pointId = (hashNum % 1000000) * 1000 + parseInt(chunk.id);\n            const point = {\n              id: pointId,\n              vector: embedding,\n              payload: {\n                filePath: file.path,\n                chunkId: chunk.id,\n                fileHash: file.hash,\n                content: chunk.content,\n                parentDirectories: file.parentDirs\n              }\n            };\n            await qdrant.upsertPoints([point]);\n          }\n          \n          indexed++;\n          if (config.verbose) {\n            console.log(`  Indexed: ${file.path} (${chunks.length} chunks)`);\n          }\n        } catch (error) {\n          const errorMessage = error instanceof Error ? error.message : String(error);\n          const causeMessage = error instanceof Error && error.cause ? `: ${(error.cause as Error).message}` : '';\n          errors.push(`Failed to process ${file.path}: ${errorMessage}${causeMessage}`);\n        }\n      }\n      \n      // Mark directory as completed if no errors for this directory\n      const directoryErrors = errors.filter(err => err.includes(path));\n      const directoryStatus = directoryErrors.length > 0 ? 'failed' : 'completed';\n      await sqlite.upsertDirectory(normalizedPath, directoryStatus);\n      \n    } catch (error) {\n      const normalizedPath = normalizePath(path);\n      await sqlite.upsertDirectory(normalizedPath, 'failed');\n      errors.push(`Failed to scan directory ${path}: ${(error as Error).message}`);\n    }\n  }\n  \n  return { indexed, skipped, errors };\n}"],"names":["fs"],"mappings":";;;;;AA2BO,MAAM,sBAAsB,MAAM;AAAA,EACvC,YAAY,SAAiC,OAAe;AAC1D,UAAM,OAAO;AAD8B,SAAA,QAAA;AAE3C,SAAK,OAAO;AAAA,EACd;AACF;AAEO,SAAS,UAAU,SAAiB,WAAmB,SAA8B;AAC1F,MAAI,QAAQ,UAAU,WAAW;AAC/B,WAAO,CAAC;AAAA,MACN,IAAI;AAAA,MACJ;AAAA,MACA,YAAY;AAAA,MACZ,UAAU,QAAQ;AAAA,IAAA,CACnB;AAAA,EACH;AAEA,QAAM,SAAsB,CAAA;AAC5B,MAAI,aAAa;AACjB,MAAI,UAAU;AAEd,SAAO,aAAa,QAAQ,QAAQ;AAClC,UAAM,WAAW,KAAK,IAAI,aAAa,WAAW,QAAQ,MAAM;AAChE,UAAM,eAAe,QAAQ,MAAM,YAAY,QAAQ;AAEvD,WAAO,KAAK;AAAA,MACV,IAAI,QAAQ,SAAA;AAAA,MACZ,SAAS;AAAA,MACT;AAAA,MACA;AAAA,IAAA,CACD;AAED;AACA,UAAM,YAAY,WAAW;AAE7B,QAAI,aAAa,YAAY;AAC3B,mBAAa,aAAa,KAAK,IAAI,GAAG,YAAY,OAAO;AAAA,IAC3D,OAAO;AACL,mBAAa;AAAA,IACf;AAEA,QAAI,cAAc,QAAQ,OAAQ;AAAA,EACpC;AAEA,SAAO;AACT;AAEA,eAAsB,cAAc,SAAiB,SAA2C;AAC9F,QAAM,QAAoB,CAAA;AAC1B,QAAM,8BAAc,IAAA;AAEpB,iBAAe,cAAc,aAAoC;AAC/D,UAAM,iBAAiB,cAAc,WAAW;AAEhD,QAAI,QAAQ,IAAI,cAAc,GAAG;AAC/B;AAAA,IACF;AACA,YAAQ,IAAI,cAAc;AAE1B,QAAI;AACF,UAAI,iBAAiB,gBAAgB,QAAQ,cAAc,GAAG;AAC5D;AAAA,MACF;AAEA,UAAI,MAAM,YAAY,cAAc,GAAG;AACrC,cAAM,UAAU,MAAMA,SAAG,QAAQ,cAAc;AAE/C,mBAAW,SAAS,SAAS;AAC3B,gBAAM,WAAW,KAAK,gBAAgB,KAAK;AAC3C,gBAAM,cAAc,QAAQ;AAAA,QAC9B;AAAA,MACF,WAAW,MAAM,OAAO,cAAc,GAAG;AACvC,YAAI,CAAC,oBAAoB,cAAc,GAAG;AACxC;AAAA,QACF;AAEA,cAAM,QAAQ,MAAMA,SAAG,KAAK,cAAc;AAC1C,YAAI,MAAM,OAAO,QAAQ,aAAa;AACpC;AAAA,QACF;AAEA,cAAM,WAAW,MAAM,YAAY,cAAc;AACjD,cAAM,KAAK,QAAQ;AAAA,MACrB;AAAA,IACF,SAAS,OAAO;AACd,YAAM,IAAI,cAAc,6BAA6B,cAAc,IAAI,KAAc;AAAA,IACvF;AAAA,EACF;AAEA,QAAM,cAAc,OAAO;AAC3B,SAAO;AACT;AAEA,eAAsB,gBAAgB,UAAqC;AACzE,MAAI;AACF,WAAO,MAAM,YAAY,QAAQ;AAAA,EACnC,SAAS,OAAO;AACd,UAAM,IAAI,cAAc,+BAA+B,KAAc;AAAA,EACvE;AACF;AAEA,eAAe,oBAAoB,UAAkB,gBAA4B,QAAkC;AACjH,MAAI;AACF,UAAMA,MAAK,MAAM,OAAO,aAAa;AAGrC,UAAM,eAAe,MAAMA,IAAG,KAAK,QAAQ;AAC3C,UAAM,kBAAkB,IAAI,KAAK,eAAe,YAAY;AAG5D,QAAI,aAAa,SAAS,iBAAiB;AACzC,aAAO;AAAA,IACT;AAGA,UAAM,kBAAkB,MAAM,YAAY,QAAQ;AAClD,WAAO,gBAAgB,SAAS,eAAe;AAAA,EAEjD,SAAS,cAAc;AAErB,QAAI,OAAO,SAAS;AAClB,cAAQ,IAAI,kDAAkD,QAAQ,KAAK,YAAY;AAAA,IACzF;AACA,QAAI;AACF,YAAM,kBAAkB,MAAM,YAAY,QAAQ;AAClD,aAAO,gBAAgB,SAAS,eAAe;AAAA,IACjD,SAAS,WAAW;AAElB,UAAI,OAAO,SAAS;AAClB,gBAAQ,IAAI,uCAAuC,QAAQ,KAAK,SAAS;AAAA,MAC3E;AACA,aAAO;AAAA,IACT;AAAA,EACF;AACF;AAEA,eAAsB,iBAAiB,OAAiB,QAAsC;AAC5F,MAAI,UAAU;AACd,MAAI,UAAU;AACd,QAAM,SAAmB,CAAA;AAEzB,QAAM,cAA2B;AAAA,IAC/B,gBAAgB,OAAO,SAAS;AAAA,IAChC,aAAa,OAAO,SAAS;AAAA,EAAA;AAI/B,QAAM,EAAE,QAAQ,OAAA,IAAW,MAAM,kBAAkB,MAAM;AAGzD,MAAI,aAAa;AACjB,aAAW,QAAQ,OAAO;AACxB,QAAI;AACF,UAAI,OAAO,SAAS;AAClB,gBAAQ,IAAI,uBAAuB,IAAI,EAAE;AAAA,MAC3C;AACA,YAAM,QAAQ,MAAM,cAAc,MAAM,WAAW;AACnD,oBAAc,MAAM;AACpB,UAAI,OAAO,SAAS;AAClB,gBAAQ,IAAI,SAAS,MAAM,MAAM,wBAAwB,IAAI,EAAE;AAAA,MACjE;AAAA,IACF,QAAQ;AAAA,IAER;AAAA,EACF;AAEA,MAAI,CAAC,OAAO,WAAW,aAAa,GAAG;AACrC,YAAQ,IAAI,cAAc,UAAU,WAAW;AAAA,EACjD;AAEA,aAAW,QAAQ,OAAO;AACxB,QAAI;AAEF,YAAM,iBAAiB,cAAc,IAAI;AACzC,YAAM,OAAO,gBAAgB,gBAAgB,UAAU;AAEvD,YAAM,QAAQ,MAAM,cAAc,MAAM,WAAW;AAEnD,iBAAW,QAAQ,OAAO;AACxB,YAAI;AAEF,gBAAM,eAAe,MAAM,OAAO,QAAQ,KAAK,IAAI;AAEnD,cAAI,cAAc;AAChB,kBAAM,oBAAoB,MAAM,oBAAoB,KAAK,MAAM,cAAc,MAAM;AACnF,gBAAI,CAAC,mBAAmB;AACtB;AACA;AAAA,YACF;AAGA,kBAAM,OAAO,uBAAuB,aAAa,IAAI;AAAA,UACvD;AAEA,gBAAM,UAAU,MAAMA,SAAG,SAAS,KAAK,MAAM,OAAO;AACpD,gBAAM,SAAS,UAAU,SAAS,OAAO,SAAS,WAAW,OAAO,SAAS,YAAY;AAGzF,gBAAM,OAAO,WAAW,MAAM,MAAM;AAGpC,mBAAS,IAAI,GAAG,IAAI,OAAO,QAAQ,KAAK;AACtC,kBAAM,QAAQ,OAAO,CAAC;AACtB,kBAAM,YAAY,MAAM,kBAAkB,MAAM,SAAS,MAAM;AAE/D,kBAAM,UAAU,SAAS,KAAK,KAAK,MAAM,GAAG,CAAC,GAAG,EAAE;AAClD,kBAAM,UAAW,UAAU,MAAW,MAAO,SAAS,MAAM,EAAE;AAC9D,kBAAM,QAAQ;AAAA,cACZ,IAAI;AAAA,cACJ,QAAQ;AAAA,cACR,SAAS;AAAA,gBACP,UAAU,KAAK;AAAA,gBACf,SAAS,MAAM;AAAA,gBACf,UAAU,KAAK;AAAA,gBACf,SAAS,MAAM;AAAA,gBACf,mBAAmB,KAAK;AAAA,cAAA;AAAA,YAC1B;AAEF,kBAAM,OAAO,aAAa,CAAC,KAAK,CAAC;AAAA,UACnC;AAEA;AACA,cAAI,OAAO,SAAS;AAClB,oBAAQ,IAAI,cAAc,KAAK,IAAI,KAAK,OAAO,MAAM,UAAU;AAAA,UACjE;AAAA,QACF,SAAS,OAAO;AACd,gBAAM,eAAe,iBAAiB,QAAQ,MAAM,UAAU,OAAO,KAAK;AAC1E,gBAAM,eAAe,iBAAiB,SAAS,MAAM,QAAQ,KAAM,MAAM,MAAgB,OAAO,KAAK;AACrG,iBAAO,KAAK,qBAAqB,KAAK,IAAI,KAAK,YAAY,GAAG,YAAY,EAAE;AAAA,QAC9E;AAAA,MACF;AAGA,YAAM,kBAAkB,OAAO,OAAO,SAAO,IAAI,SAAS,IAAI,CAAC;AAC/D,YAAM,kBAAkB,gBAAgB,SAAS,IAAI,WAAW;AAChE,YAAM,OAAO,gBAAgB,gBAAgB,eAAe;AAAA,IAE9D,SAAS,OAAO;AACd,YAAM,iBAAiB,cAAc,IAAI;AACzC,YAAM,OAAO,gBAAgB,gBAAgB,QAAQ;AACrD,aAAO,KAAK,4BAA4B,IAAI,KAAM,MAAgB,OAAO,EAAE;AAAA,IAC7E;AAAA,EACF;AAEA,SAAO,EAAE,SAAS,SAAS,OAAA;AAC7B;"}

package/dist/search.js

@@ -15,14 +15,38 @@ async function searchContent(query, options = {}) {
     const config = (await import("./config.js")).loadConfig();
     const { qdrant } = await initializeStorage(config);
     const queryEmbedding = await generateEmbedding(query, config);
-    const points = await qdrant.searchPoints(queryEmbedding, limit);
-    return points.filter((point) => (point.score ?? 0) >= threshold).map((point) => ({
-      filePath: point.payload.filePath,
-      chunkId: point.payload.chunkId,
-      content: "",
-      score: point.score ?? 0,
-      parentDirectories: point.payload.parentDirectories
-    }));
+    const points = await qdrant.searchPoints(queryEmbedding, limit * 5);
+    const fileGroups = /* @__PURE__ */ new Map();
+    for (const point of points) {
+      const score = point.score ?? 0;
+      if (score < threshold) continue;
+      const filePath = point.payload.filePath;
+      if (!fileGroups.has(filePath)) {
+        fileGroups.set(filePath, []);
+      }
+      fileGroups.get(filePath).push({
+        score,
+        chunkId: point.payload.chunkId,
+        parentDirectories: point.payload.parentDirectories
+      });
+    }
+    const results = [];
+    for (const [filePath, chunks] of fileGroups.entries()) {
+      const avgScore = chunks.reduce((sum, chunk) => sum + chunk.score, 0) / chunks.length;
+      const sortedChunks = chunks.sort((a, b) => b.score - a.score);
+      const chunkMatches = sortedChunks.map((chunk) => ({
+        chunkId: chunk.chunkId,
+        score: chunk.score
+      }));
+      results.push({
+        filePath,
+        score: avgScore,
+        matchingChunks: chunks.length,
+        parentDirectories: sortedChunks[0].parentDirectories,
+        chunks: chunkMatches
+      });
+    }
+    return results.sort((a, b) => b.score - a.score).slice(0, limit);
   } catch (error) {
     throw new SearchError(`Failed to search content`, error);
   }
@@ -56,6 +80,26 @@ async function findSimilarFiles(filePath, limit = 5) {
     throw new SearchError(`Failed to find similar files`, error);
   }
 }
+async function getChunkContent(filePath, chunkId) {
+  try {
+    if (!await fileExists(filePath)) {
+      throw new Error(`File not found: ${filePath}`);
+    }
+    const config = (await import("./config.js")).loadConfig();
+    const { sqlite } = await initializeStorage(config);
+    const fileRecord = await sqlite.getFile(filePath);
+    if (!fileRecord || fileRecord.chunks.length === 0) {
+      throw new Error(`File not indexed: ${filePath}`);
+    }
+    const chunk = fileRecord.chunks.find((c) => c.id === chunkId);
+    if (!chunk) {
+      throw new Error(`Chunk ${chunkId} not found in file: ${filePath}`);
+    }
+    return chunk.content;
+  } catch (error) {
+    throw new SearchError(`Failed to get chunk content`, error);
+  }
+}
 async function getFileContent(filePath, chunks) {
   try {
     if (!await fileExists(filePath)) {
@@ -91,6 +135,7 @@ function parseChunkRange(chunks) {
 export {
   SearchError,
   findSimilarFiles,
+  getChunkContent,
   getFileContent,
   searchContent
 };

package/dist/search.js.map

@@ -1 +1 @@
-{"version":3,"file":"search.js","sources":["../src/search.ts"],"sourcesContent":["import { promises as fs } from 'fs';\nimport { generateEmbedding } from './embedding.js';\nimport { initializeStorage } from './storage.js';\nimport { fileExists } from './utils.js';\n\nexport interface SearchOptions {\n  limit?: number;\n  threshold?: number;\n  directoryPath?: string;\n}\n\nexport interface SearchResult {\n  filePath: string;\n  chunkId: string;\n  content: string;\n  score: number;\n  parentDirectories: string[];\n}\n\nexport interface SimilarFile {\n  filePath: string;\n  score: number;\n  parentDirectories: string[];\n}\n\nexport class SearchError extends Error {\n  constructor(message: string, public override cause?: Error) {\n    super(message);\n    this.name = 'SearchError';\n  }\n}\n\nexport async function searchContent(query: string, options: SearchOptions = {}): Promise<SearchResult[]> {\n  const { limit = 10, threshold = 0.0 } = options;\n  \n  try {\n    const config = (await import('./config.js')).loadConfig();\n    const { qdrant } = await initializeStorage(config);\n    \n    const queryEmbedding = await generateEmbedding(query, config);\n    const points = await qdrant.searchPoints(queryEmbedding, limit);\n    \n    return points\n      .filter(point => (point.score ?? 0) >= threshold)\n      .map(point => ({\n        filePath: point.payload.filePath,\n        chunkId: point.payload.chunkId,\n        content: '',\n        score: point.score ?? 0,\n        parentDirectories: point.payload.parentDirectories\n      }));\n  } catch (error) {\n    throw new SearchError(`Failed to search content`, error as Error);\n  }\n}\n\nexport async function findSimilarFiles(filePath: string, limit: number = 5): Promise<SimilarFile[]> {\n  try {\n    if (!await fileExists(filePath)) {\n      throw new Error(`File not found: ${filePath}`);\n    }\n    \n    const config = (await import('./config.js')).loadConfig();\n    const { sqlite, qdrant } = await initializeStorage(config);\n    \n    const fileRecord = await sqlite.getFile(filePath);\n    if (!fileRecord || fileRecord.chunks.length === 0) {\n      const content = await fs.readFile(filePath, 'utf-8');\n      const embedding = await generateEmbedding(content, config);\n      const points = await qdrant.searchPoints(embedding, limit + 1);\n      \n      return points\n        .filter(point => point.payload.filePath !== filePath)\n        .slice(0, limit)\n        .map(point => ({\n          filePath: point.payload.filePath,\n          score: point.score ?? 0,\n          parentDirectories: point.payload.parentDirectories\n        }));\n    }\n    \n    const firstChunkEmbedding = await generateEmbedding(fileRecord.chunks[0].content, config);\n    const points = await qdrant.searchPoints(firstChunkEmbedding, limit + 1);\n    \n    return points\n      .filter(point => point.payload.filePath !== filePath)\n      .slice(0, limit)\n      .map(point => ({\n        filePath: point.payload.filePath,\n        score: point.score ?? 0,\n        parentDirectories: point.payload.parentDirectories\n      }));\n  } catch (error) {\n    throw new SearchError(`Failed to find similar files`, error as Error);\n  }\n}\n\nexport async function getFileContent(filePath: string, chunks?: string): Promise<string> {\n  try {\n    if (!await fileExists(filePath)) {\n      throw new Error(`File not found: ${filePath}`);\n    }\n    \n    const config = (await import('./config.js')).loadConfig();\n    const { sqlite } = await initializeStorage(config);\n    \n    const fileRecord = await sqlite.getFile(filePath);\n    \n    if (!chunks) {\n      return await fs.readFile(filePath, 'utf-8');\n    }\n    \n    if (!fileRecord || fileRecord.chunks.length === 0) {\n      return await fs.readFile(filePath, 'utf-8');\n    }\n    \n    const chunkRange = parseChunkRange(chunks);\n    const selectedChunks = fileRecord.chunks.filter(chunk => {\n      const chunkNum = parseInt(chunk.id);\n      return chunkNum >= chunkRange.start && chunkNum <= chunkRange.end;\n    });\n    \n    return selectedChunks.map(chunk => chunk.content).join('');\n  } catch (error) {\n    throw new SearchError(`Failed to get file content`, error as Error);\n  }\n}\n\nfunction parseChunkRange(chunks: string): { start: number; end: number } {\n  if (chunks.includes('-')) {\n    const [start, end] = chunks.split('-').map(num => parseInt(num.trim()));\n    return { start: start || 0, end: end || start || 0 };\n  }\n  \n  const num = parseInt(chunks);\n  return { start: num, end: num };\n}"],"names":["fs","points","num"],"mappings":";;;;AAyBO,MAAM,oBAAoB,MAAM;AAAA,EACrC,YAAY,SAAiC,OAAe;AAC1D,UAAM,OAAO;AAD8B,SAAA,QAAA;AAE3C,SAAK,OAAO;AAAA,EACd;AACF;AAEA,eAAsB,cAAc,OAAe,UAAyB,IAA6B;AACvG,QAAM,EAAE,QAAQ,IAAI,YAAY,MAAQ;AAExC,MAAI;AACF,UAAM,UAAU,MAAM,OAAO,aAAa,GAAG,WAAA;AAC7C,UAAM,EAAE,OAAA,IAAW,MAAM,kBAAkB,MAAM;AAEjD,UAAM,iBAAiB,MAAM,kBAAkB,OAAO,MAAM;AAC5D,UAAM,SAAS,MAAM,OAAO,aAAa,gBAAgB,KAAK;AAE9D,WAAO,OACJ,OAAO,CAAA,WAAU,MAAM,SAAS,MAAM,SAAS,EAC/C,IAAI,CAAA,WAAU;AAAA,MACb,UAAU,MAAM,QAAQ;AAAA,MACxB,SAAS,MAAM,QAAQ;AAAA,MACvB,SAAS;AAAA,MACT,OAAO,MAAM,SAAS;AAAA,MACtB,mBAAmB,MAAM,QAAQ;AAAA,IAAA,EACjC;AAAA,EACN,SAAS,OAAO;AACd,UAAM,IAAI,YAAY,4BAA4B,KAAc;AAAA,EAClE;AACF;AAEA,eAAsB,iBAAiB,UAAkB,QAAgB,GAA2B;AAClG,MAAI;AACF,QAAI,CAAC,MAAM,WAAW,QAAQ,GAAG;AAC/B,YAAM,IAAI,MAAM,mBAAmB,QAAQ,EAAE;AAAA,IAC/C;AAEA,UAAM,UAAU,MAAM,OAAO,aAAa,GAAG,WAAA;AAC7C,UAAM,EAAE,QAAQ,OAAA,IAAW,MAAM,kBAAkB,MAAM;AAEzD,UAAM,aAAa,MAAM,OAAO,QAAQ,QAAQ;AAChD,QAAI,CAAC,cAAc,WAAW,OAAO,WAAW,GAAG;AACjD,YAAM,UAAU,MAAMA,SAAG,SAAS,UAAU,OAAO;AACnD,YAAM,YAAY,MAAM,kBAAkB,SAAS,MAAM;AACzD,YAAMC,UAAS,MAAM,OAAO,aAAa,WAAW,QAAQ,CAAC;AAE7D,aAAOA,QACJ,OAAO,CAAA,UAAS,MAAM,QAAQ,aAAa,QAAQ,EACnD,MAAM,GAAG,KAAK,EACd,IAAI,CAAA,WAAU;AAAA,QACb,UAAU,MAAM,QAAQ;AAAA,QACxB,OAAO,MAAM,SAAS;AAAA,QACtB,mBAAmB,MAAM,QAAQ;AAAA,MAAA,EACjC;AAAA,IACN;AAEA,UAAM,sBAAsB,MAAM,kBAAkB,WAAW,OAAO,CAAC,EAAE,SAAS,MAAM;AACxF,UAAM,SAAS,MAAM,OAAO,aAAa,qBAAqB,QAAQ,CAAC;AAEvE,WAAO,OACJ,OAAO,CAAA,UAAS,MAAM,QAAQ,aAAa,QAAQ,EACnD,MAAM,GAAG,KAAK,EACd,IAAI,CAAA,WAAU;AAAA,MACb,UAAU,MAAM,QAAQ;AAAA,MACxB,OAAO,MAAM,SAAS;AAAA,MACtB,mBAAmB,MAAM,QAAQ;AAAA,IAAA,EACjC;AAAA,EACN,SAAS,OAAO;AACd,UAAM,IAAI,YAAY,gCAAgC,KAAc;AAAA,EACtE;AACF;AAEA,eAAsB,eAAe,UAAkB,QAAkC;AACvF,MAAI;AACF,QAAI,CAAC,MAAM,WAAW,QAAQ,GAAG;AAC/B,YAAM,IAAI,MAAM,mBAAmB,QAAQ,EAAE;AAAA,IAC/C;AAEA,UAAM,UAAU,MAAM,OAAO,aAAa,GAAG,WAAA;AAC7C,UAAM,EAAE,OAAA,IAAW,MAAM,kBAAkB,MAAM;AAEjD,UAAM,aAAa,MAAM,OAAO,QAAQ,QAAQ;AAEhD,QAAI,CAAC,QAAQ;AACX,aAAO,MAAMD,SAAG,SAAS,UAAU,OAAO;AAAA,IAC5C;AAEA,QAAI,CAAC,cAAc,WAAW,OAAO,WAAW,GAAG;AACjD,aAAO,MAAMA,SAAG,SAAS,UAAU,OAAO;AAAA,IAC5C;AAEA,UAAM,aAAa,gBAAgB,MAAM;AACzC,UAAM,iBAAiB,WAAW,OAAO,OAAO,CAAA,UAAS;AACvD,YAAM,WAAW,SAAS,MAAM,EAAE;AAClC,aAAO,YAAY,WAAW,SAAS,YAAY,WAAW;AAAA,IAChE,CAAC;AAED,WAAO,eAAe,IAAI,CAAA,UAAS,MAAM,OAAO,EAAE,KAAK,EAAE;AAAA,EAC3D,SAAS,OAAO;AACd,UAAM,IAAI,YAAY,8BAA8B,KAAc;AAAA,EACpE;AACF;AAEA,SAAS,gBAAgB,QAAgD;AACvE,MAAI,OAAO,SAAS,GAAG,GAAG;AACxB,UAAM,CAAC,OAAO,GAAG,IAAI,OAAO,MAAM,GAAG,EAAE,IAAI,CAAAE,SAAO,SAASA,KAAI,KAAA,CAAM,CAAC;AACtE,WAAO,EAAE,OAAO,SAAS,GAAG,KAAK,OAAO,SAAS,EAAA;AAAA,EACnD;AAEA,QAAM,MAAM,SAAS,MAAM;AAC3B,SAAO,EAAE,OAAO,KAAK,KAAK,IAAA;AAC5B;"}
+{"version":3,"file":"search.js","sources":["../src/search.ts"],"sourcesContent":["import { promises as fs } from 'fs';\nimport { generateEmbedding } from './embedding.js';\nimport { initializeStorage } from './storage.js';\nimport { fileExists } from './utils.js';\n\nexport interface SearchOptions {\n  limit?: number;\n  threshold?: number;\n  directoryPath?: string;\n}\n\nexport interface ChunkMatch {\n  chunkId: string;\n  score: number;\n}\n\nexport interface SearchResult {\n  filePath: string;\n  score: number;\n  matchingChunks: number;\n  parentDirectories: string[];\n  chunks: ChunkMatch[];\n}\n\nexport interface SimilarFile {\n  filePath: string;\n  score: number;\n  parentDirectories: string[];\n}\n\nexport class SearchError extends Error {\n  constructor(message: string, public override cause?: Error) {\n    super(message);\n    this.name = 'SearchError';\n  }\n}\n\nexport async function searchContent(query: string, options: SearchOptions = {}): Promise<SearchResult[]> {\n  const { limit = 10, threshold = 0.0 } = options;\n  \n  try {\n    const config = (await import('./config.js')).loadConfig();\n    const { qdrant } = await initializeStorage(config);\n    \n    const queryEmbedding = await generateEmbedding(query, config);\n    // Get more points initially since we'll group by file\n    const points = await qdrant.searchPoints(queryEmbedding, limit * 5);\n    \n    // Group points by file path\n    const fileGroups = new Map<string, Array<{ score: number; chunkId: string; parentDirectories: string[] }>>();\n    \n    for (const point of points) {\n      const score = point.score ?? 0;\n      if (score < threshold) continue;\n      \n      const filePath = point.payload.filePath;\n      if (!fileGroups.has(filePath)) {\n        fileGroups.set(filePath, []);\n      }\n      \n      fileGroups.get(filePath)!.push({\n        score,\n        chunkId: point.payload.chunkId,\n        parentDirectories: point.payload.parentDirectories\n      });\n    }\n    \n    // Calculate average score per file and sort\n    const results: SearchResult[] = [];\n    for (const [filePath, chunks] of fileGroups.entries()) {\n      const avgScore = chunks.reduce((sum, chunk) => sum + chunk.score, 0) / chunks.length;\n      \n      // Sort chunks by score (best first) and create chunk matches\n      const sortedChunks = chunks.sort((a, b) => b.score - a.score);\n      const chunkMatches: ChunkMatch[] = sortedChunks.map(chunk => ({\n        chunkId: chunk.chunkId,\n        score: chunk.score\n      }));\n      \n      results.push({\n        filePath,\n        score: avgScore,\n        matchingChunks: chunks.length,\n        parentDirectories: sortedChunks[0].parentDirectories,\n        chunks: chunkMatches\n      });\n    }\n    \n    // Sort by average score and return top results\n    return results\n      .sort((a, b) => b.score - a.score)\n      .slice(0, limit);\n  } catch (error) {\n    throw new SearchError(`Failed to search content`, error as Error);\n  }\n}\n\nexport async function findSimilarFiles(filePath: string, limit: number = 5): Promise<SimilarFile[]> {\n  try {\n    if (!await fileExists(filePath)) {\n      throw new Error(`File not found: ${filePath}`);\n    }\n    \n    const config = (await import('./config.js')).loadConfig();\n    const { sqlite, qdrant } = await initializeStorage(config);\n    \n    const fileRecord = await sqlite.getFile(filePath);\n    if (!fileRecord || fileRecord.chunks.length === 0) {\n      const content = await fs.readFile(filePath, 'utf-8');\n      const embedding = await generateEmbedding(content, config);\n      const points = await qdrant.searchPoints(embedding, limit + 1);\n      \n      return points\n        .filter(point => point.payload.filePath !== filePath)\n        .slice(0, limit)\n        .map(point => ({\n          filePath: point.payload.filePath,\n          score: point.score ?? 0,\n          parentDirectories: point.payload.parentDirectories\n        }));\n    }\n    \n    const firstChunkEmbedding = await generateEmbedding(fileRecord.chunks[0].content, config);\n    const points = await qdrant.searchPoints(firstChunkEmbedding, limit + 1);\n    \n    return points\n      .filter(point => point.payload.filePath !== filePath)\n      .slice(0, limit)\n      .map(point => ({\n        filePath: point.payload.filePath,\n        score: point.score ?? 0,\n        parentDirectories: point.payload.parentDirectories\n      }));\n  } catch (error) {\n    throw new SearchError(`Failed to find similar files`, error as Error);\n  }\n}\n\nexport async function getChunkContent(filePath: string, chunkId: string): Promise<string> {\n  try {\n    if (!await fileExists(filePath)) {\n      throw new Error(`File not found: ${filePath}`);\n    }\n    \n    const config = (await import('./config.js')).loadConfig();\n    const { sqlite } = await initializeStorage(config);\n    \n    const fileRecord = await sqlite.getFile(filePath);\n    if (!fileRecord || fileRecord.chunks.length === 0) {\n      throw new Error(`File not indexed: ${filePath}`);\n    }\n    \n    const chunk = fileRecord.chunks.find(c => c.id === chunkId);\n    if (!chunk) {\n      throw new Error(`Chunk ${chunkId} not found in file: ${filePath}`);\n    }\n    \n    return chunk.content;\n  } catch (error) {\n    throw new SearchError(`Failed to get chunk content`, error as Error);\n  }\n}\n\nexport async function getFileContent(filePath: string, chunks?: string): Promise<string> {\n  try {\n    if (!await fileExists(filePath)) {\n      throw new Error(`File not found: ${filePath}`);\n    }\n    \n    const config = (await import('./config.js')).loadConfig();\n    const { sqlite } = await initializeStorage(config);\n    \n    const fileRecord = await sqlite.getFile(filePath);\n    \n    if (!chunks) {\n      return await fs.readFile(filePath, 'utf-8');\n    }\n    \n    if (!fileRecord || fileRecord.chunks.length === 0) {\n      return await fs.readFile(filePath, 'utf-8');\n    }\n    \n    const chunkRange = parseChunkRange(chunks);\n    const selectedChunks = fileRecord.chunks.filter(chunk => {\n      const chunkNum = parseInt(chunk.id);\n      return chunkNum >= chunkRange.start && chunkNum <= chunkRange.end;\n    });\n    \n    return selectedChunks.map(chunk => chunk.content).join('');\n  } catch (error) {\n    throw new SearchError(`Failed to get file content`, error as Error);\n  }\n}\n\nfunction parseChunkRange(chunks: string): { start: number; end: number } {\n  if (chunks.includes('-')) {\n    const [start, end] = chunks.split('-').map(num => parseInt(num.trim()));\n    return { start: start || 0, end: end || start || 0 };\n  }\n  \n  const num = parseInt(chunks);\n  return { start: num, end: num };\n}"],"names":["fs","points","num"],"mappings":";;;;AA8BO,MAAM,oBAAoB,MAAM;AAAA,EACrC,YAAY,SAAiC,OAAe;AAC1D,UAAM,OAAO;AAD8B,SAAA,QAAA;AAE3C,SAAK,OAAO;AAAA,EACd;AACF;AAEA,eAAsB,cAAc,OAAe,UAAyB,IAA6B;AACvG,QAAM,EAAE,QAAQ,IAAI,YAAY,MAAQ;AAExC,MAAI;AACF,UAAM,UAAU,MAAM,OAAO,aAAa,GAAG,WAAA;AAC7C,UAAM,EAAE,OAAA,IAAW,MAAM,kBAAkB,MAAM;AAEjD,UAAM,iBAAiB,MAAM,kBAAkB,OAAO,MAAM;AAE5D,UAAM,SAAS,MAAM,OAAO,aAAa,gBAAgB,QAAQ,CAAC;AAGlE,UAAM,iCAAiB,IAAA;AAEvB,eAAW,SAAS,QAAQ;AAC1B,YAAM,QAAQ,MAAM,SAAS;AAC7B,UAAI,QAAQ,UAAW;AAEvB,YAAM,WAAW,MAAM,QAAQ;AAC/B,UAAI,CAAC,WAAW,IAAI,QAAQ,GAAG;AAC7B,mBAAW,IAAI,UAAU,EAAE;AAAA,MAC7B;AAEA,iBAAW,IAAI,QAAQ,EAAG,KAAK;AAAA,QAC7B;AAAA,QACA,SAAS,MAAM,QAAQ;AAAA,QACvB,mBAAmB,MAAM,QAAQ;AAAA,MAAA,CAClC;AAAA,IACH;AAGA,UAAM,UAA0B,CAAA;AAChC,eAAW,CAAC,UAAU,MAAM,KAAK,WAAW,WAAW;AACrD,YAAM,WAAW,OAAO,OAAO,CAAC,KAAK,UAAU,MAAM,MAAM,OAAO,CAAC,IAAI,OAAO;AAG9E,YAAM,eAAe,OAAO,KAAK,CAAC,GAAG,MAAM,EAAE,QAAQ,EAAE,KAAK;AAC5D,YAAM,eAA6B,aAAa,IAAI,CAAA,WAAU;AAAA,QAC5D,SAAS,MAAM;AAAA,QACf,OAAO,MAAM;AAAA,MAAA,EACb;AAEF,cAAQ,KAAK;AAAA,QACX;AAAA,QACA,OAAO;AAAA,QACP,gBAAgB,OAAO;AAAA,QACvB,mBAAmB,aAAa,CAAC,EAAE;AAAA,QACnC,QAAQ;AAAA,MAAA,CACT;AAAA,IACH;AAGA,WAAO,QACJ,KAAK,CAAC,GAAG,MAAM,EAAE,QAAQ,EAAE,KAAK,EAChC,MAAM,GAAG,KAAK;AAAA,EACnB,SAAS,OAAO;AACd,UAAM,IAAI,YAAY,4BAA4B,KAAc;AAAA,EAClE;AACF;AAEA,eAAsB,iBAAiB,UAAkB,QAAgB,GAA2B;AAClG,MAAI;AACF,QAAI,CAAC,MAAM,WAAW,QAAQ,GAAG;AAC/B,YAAM,IAAI,MAAM,mBAAmB,QAAQ,EAAE;AAAA,IAC/C;AAEA,UAAM,UAAU,MAAM,OAAO,aAAa,GAAG,WAAA;AAC7C,UAAM,EAAE,QAAQ,OAAA,IAAW,MAAM,kBAAkB,MAAM;AAEzD,UAAM,aAAa,MAAM,OAAO,QAAQ,QAAQ;AAChD,QAAI,CAAC,cAAc,WAAW,OAAO,WAAW,GAAG;AACjD,YAAM,UAAU,MAAMA,SAAG,SAAS,UAAU,OAAO;AACnD,YAAM,YAAY,MAAM,kBAAkB,SAAS,MAAM;AACzD,YAAMC,UAAS,MAAM,OAAO,aAAa,WAAW,QAAQ,CAAC;AAE7D,aAAOA,QACJ,OAAO,CAAA,UAAS,MAAM,QAAQ,aAAa,QAAQ,EACnD,MAAM,GAAG,KAAK,EACd,IAAI,CAAA,WAAU;AAAA,QACb,UAAU,MAAM,QAAQ;AAAA,QACxB,OAAO,MAAM,SAAS;AAAA,QACtB,mBAAmB,MAAM,QAAQ;AAAA,MAAA,EACjC;AAAA,IACN;AAEA,UAAM,sBAAsB,MAAM,kBAAkB,WAAW,OAAO,CAAC,EAAE,SAAS,MAAM;AACxF,UAAM,SAAS,MAAM,OAAO,aAAa,qBAAqB,QAAQ,CAAC;AAEvE,WAAO,OACJ,OAAO,CAAA,UAAS,MAAM,QAAQ,aAAa,QAAQ,EACnD,MAAM,GAAG,KAAK,EACd,IAAI,CAAA,WAAU;AAAA,MACb,UAAU,MAAM,QAAQ;AAAA,MACxB,OAAO,MAAM,SAAS;AAAA,MACtB,mBAAmB,MAAM,QAAQ;AAAA,IAAA,EACjC;AAAA,EACN,SAAS,OAAO;AACd,UAAM,IAAI,YAAY,gCAAgC,KAAc;AAAA,EACtE;AACF;AAEA,eAAsB,gBAAgB,UAAkB,SAAkC;AACxF,MAAI;AACF,QAAI,CAAC,MAAM,WAAW,QAAQ,GAAG;AAC/B,YAAM,IAAI,MAAM,mBAAmB,QAAQ,EAAE;AAAA,IAC/C;AAEA,UAAM,UAAU,MAAM,OAAO,aAAa,GAAG,WAAA;AAC7C,UAAM,EAAE,OAAA,IAAW,MAAM,kBAAkB,MAAM;AAEjD,UAAM,aAAa,MAAM,OAAO,QAAQ,QAAQ;AAChD,QAAI,CAAC,cAAc,WAAW,OAAO,WAAW,GAAG;AACjD,YAAM,IAAI,MAAM,qBAAqB,QAAQ,EAAE;AAAA,IACjD;AAEA,UAAM,QAAQ,WAAW,OAAO,KAAK,CAAA,MAAK,EAAE,OAAO,OAAO;AAC1D,QAAI,CAAC,OAAO;AACV,YAAM,IAAI,MAAM,SAAS,OAAO,uBAAuB,QAAQ,EAAE;AAAA,IACnE;AAEA,WAAO,MAAM;AAAA,EACf,SAAS,OAAO;AACd,UAAM,IAAI,YAAY,+BAA+B,KAAc;AAAA,EACrE;AACF;AAEA,eAAsB,eAAe,UAAkB,QAAkC;AACvF,MAAI;AACF,QAAI,CAAC,MAAM,WAAW,QAAQ,GAAG;AAC/B,YAAM,IAAI,MAAM,mBAAmB,QAAQ,EAAE;AAAA,IAC/C;AAEA,UAAM,UAAU,MAAM,OAAO,aAAa,GAAG,WAAA;AAC7C,UAAM,EAAE,OAAA,IAAW,MAAM,kBAAkB,MAAM;AAEjD,UAAM,aAAa,MAAM,OAAO,QAAQ,QAAQ;AAEhD,QAAI,CAAC,QAAQ;AACX,aAAO,MAAMD,SAAG,SAAS,UAAU,OAAO;AAAA,IAC5C;AAEA,QAAI,CAAC,cAAc,WAAW,OAAO,WAAW,GAAG;AACjD,aAAO,MAAMA,SAAG,SAAS,UAAU,OAAO;AAAA,IAC5C;AAEA,UAAM,aAAa,gBAAgB,MAAM;AACzC,UAAM,iBAAiB,WAAW,OAAO,OAAO,CAAA,UAAS;AACvD,YAAM,WAAW,SAAS,MAAM,EAAE;AAClC,aAAO,YAAY,WAAW,SAAS,YAAY,WAAW;AAAA,IAChE,CAAC;AAED,WAAO,eAAe,IAAI,CAAA,UAAS,MAAM,OAAO,EAAE,KAAK,EAAE;AAAA,EAC3D,SAAS,OAAO;AACd,UAAM,IAAI,YAAY,8BAA8B,KAAc;AAAA,EACpE;AACF;AAEA,SAAS,gBAAgB,QAAgD;AACvE,MAAI,OAAO,SAAS,GAAG,GAAG;AACxB,UAAM,CAAC,OAAO,GAAG,IAAI,OAAO,MAAM,GAAG,EAAE,IAAI,CAAAE,SAAO,SAASA,KAAI,KAAA,CAAM,CAAC;AACtE,WAAO,EAAE,OAAO,SAAS,GAAG,KAAK,OAAO,SAAS,EAAA;AAAA,EACnD;AAEA,QAAM,MAAM,SAAS,MAAM;AAC3B,SAAO,EAAE,OAAO,KAAK,KAAK,IAAA;AAC5B;"}

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "directory-indexer",
-  "version": "0.0.15",
+  "version": "0.1.0",
   "description": "AI-powered directory indexing with semantic search for MCP servers",
   "main": "dist/cli.js",
   "bin": {