devsmind-mcp 4.1.1 → 4.2.0

package/dist/cli/integrations/prompt.js.map

@@ -1 +1 @@
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package/dist/cli/integrations/registry.d.ts

@@ -119,7 +119,7 @@ export interface EntryContext {
  * A `global` config is different: ONE file, read by every project on the machine. Baking a single
  * project's path into it would silently point every other project at that same brain — the exact
  * bug this scope split exists to avoid. So a global entry omits `--path` entirely and leans on the
- * server's own auto-detect (`bindServerToProject` walks up from its cwd looking for `.devmind`),
+ * server's own auto-detect (`bindServerToProject` walks up from its cwd looking for `.devsmind`, or a legacy `.devmind`),
  * which works because the IDE spawns the stdio server from whichever workspace is actually open.
  * If an IDE spawns from somewhere else instead (not the common case), the server starts unbound and
  * falls back to per-call `devmind_path` — degraded, but never silently wrong.

package/dist/cli/integrations/registry.js

@@ -53,7 +53,7 @@ const path = __importStar(require("path"));
  * A `global` config is different: ONE file, read by every project on the machine. Baking a single
  * project's path into it would silently point every other project at that same brain — the exact
  * bug this scope split exists to avoid. So a global entry omits `--path` entirely and leans on the
- * server's own auto-detect (`bindServerToProject` walks up from its cwd looking for `.devmind`),
+ * server's own auto-detect (`bindServerToProject` walks up from its cwd looking for `.devsmind`, or a legacy `.devmind`),
  * which works because the IDE spawns the stdio server from whichever workspace is actually open.
  * If an IDE spawns from somewhere else instead (not the common case), the server starts unbound and
  * falls back to per-call `devmind_path` — degraded, but never silently wrong.

package/dist/cli/prune.js

@@ -41,19 +41,7 @@ const fs = __importStar(require("fs"));
 const path = __importStar(require("path"));
 const prompts_1 = __importDefault(require("prompts"));
 const database_1 = require("../db/database");
-function findDevmindDir(startDir) {
-    let current = path.resolve(startDir);
-    while (true) {
-        const candidate = path.join(current, '.devmind');
-        if (fs.existsSync(path.join(candidate, 'config.json'))) {
-            return candidate;
-        }
-        const parent = path.dirname(current);
-        if (parent === current)
-            return null;
-        current = parent;
-    }
-}
+const config_1 = require("../utils/config");
 async function handlePrune(opts) {
     const cwd = process.cwd();
     let devmindDir;
@@ -62,10 +50,10 @@ async function handlePrune(opts) {
         devmindDir = fs.existsSync(path.join(resolved, 'config.json')) ? resolved : null;
     }
     else {
-        devmindDir = findDevmindDir(cwd);
+        devmindDir = (0, config_1.findBrainDir)(cwd);
     }
     if (!devmindDir) {
-        console.error(`❌ No .devmind directory found.\n` +
+        console.error(`❌ No .devsmind directory found (nor a legacy .devmind one).\n` +
             `   Run from inside a DevsMind brain folder, or pass --path <devmind_path>.`);
         process.exit(1);
     }

package/dist/cli/prune.js.map

@@ -1 +1 @@
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package/dist/cli/view.js

@@ -38,23 +38,7 @@ const fs = __importStar(require("fs"));
 const path = __importStar(require("path"));
 const child_process_1 = require("child_process");
 const server_1 = require("../mcp/server");
-/**
- * Walk up from `startDir` until we find a `.devmind/config.json`,
- * or return null if not found.
- */
-function findDevmindDir(startDir) {
-    let current = path.resolve(startDir);
-    while (true) {
-        const candidate = path.join(current, '.devmind');
-        if (fs.existsSync(path.join(candidate, 'config.json'))) {
-            return candidate;
-        }
-        const parent = path.dirname(current);
-        if (parent === current)
-            return null; // filesystem root
-        current = parent;
-    }
-}
+const config_1 = require("../utils/config");
 async function handleView(opts) {
     const cwd = process.cwd();
     let devmindDir;
@@ -63,10 +47,10 @@ async function handleView(opts) {
         devmindDir = fs.existsSync(path.join(resolved, 'config.json')) ? resolved : null;
     }
     else {
-        devmindDir = findDevmindDir(cwd);
+        devmindDir = (0, config_1.findBrainDir)(cwd);
     }
     if (!devmindDir) {
-        console.error(`❌ No .devmind directory found.\n` +
+        console.error(`❌ No .devsmind directory found (nor a legacy .devmind one).\n` +
             `   Run from inside a DevsMind brain folder, or pass --path <devmind_path>.`);
         process.exit(1);
     }

package/dist/cli/view.js.map

@@ -1 +1 @@
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package/dist/db/analyze.d.ts

@@ -56,6 +56,11 @@ export interface AnalysisReport {
         repo: string;
         file: string;
     }[];
+    stray_output_dirs: {
+        file_path: string;
+        target: string;
+        kind: 'graph' | 'vectors';
+    }[];
 }
 /**
  * Runs every local, zero-AI health check against the graph and — when `fix` is true —

package/dist/db/analyze.js

@@ -91,6 +91,12 @@ function runAnalysis(db, workspaceRoot, opts = {}) {
             }
         }
     }
+    // Computed here, AFTER the renamed/untracked detection loop above (not alongside
+    // findSpuriousAndMissingFileNodes near the top): it calls toRepoRelativePath internally, which
+    // calls resolveRepoPath for every distinct file_path in the graph — running it earlier would
+    // interleave those calls with the detection loop's own resolveRepoPath call, corrupting any
+    // test (or future caller) that depends on that call happening a specific number of times.
+    const stray_output_dirs = db.findStrayOutputDirs();
     if (fix) {
         // Migrate renames FIRST, before the missing-file deprecation pass below: a node whose file
         // was just `git mv`-ed has a file_path that no longer exists on disk, so
@@ -112,6 +118,21 @@ function runAnalysis(db, workspaceRoot, opts = {}) {
         for (const e of dangling_edges) {
             db.deleteDanglingEdge(e.source_node_id, e.target_node_id);
         }
+        // Remove the stray directories THEN re-trigger the write for every file they blocked, so
+        // `--fix` fully resolves this in one shot — the affected file's graph/vectors JSON exists
+        // and is current immediately, rather than only after the user remembers to run `sync` again.
+        // Safe to rmSync: every target here already passed findStrayOutputDirs' containment check,
+        // so it's strictly inside `.devmind/graph`/`.devmind/vectors` — DevsMind's own generated
+        // output, never user source.
+        const filesToRewrite = new Set();
+        for (const s of stray_output_dirs) {
+            fs.rmSync(s.target, { recursive: true, force: true });
+            filesToRewrite.add(s.file_path);
+        }
+        for (const f of filesToRewrite) {
+            db.writeGraphToDisk(f);
+            db.writeVectorsToDisk(f);
+        }
         db.setSystemMeta(LAST_ANALYSIS_KEY, new Date().toISOString());
     }
     const summary = {
@@ -126,6 +147,7 @@ function runAnalysis(db, workspaceRoot, opts = {}) {
         missing_files: missing_files.length,
         renamed_files: renamed_files.length,
         untracked_files: untracked_files.length,
+        stray_output_dirs: stray_output_dirs.length,
     };
     return {
         fixed: fix,
@@ -141,6 +163,7 @@ function runAnalysis(db, workspaceRoot, opts = {}) {
         missing_files,
         renamed_files,
         untracked_files,
+        stray_output_dirs,
     };
 }
 /** Migrates every node whose file_path resolves to `from` onto `to`, cascading the id/connections/history via `renameNode`. Returns true if anything was migrated. */

package/dist/db/analyze.js.map

@@ -1 +1 @@
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package/dist/db/database.d.ts

@@ -936,6 +936,29 @@ export declare class DevMindDatabase {
             file_path: string;
         }[];
     };
+    /**
+     * Finds `.devmind/graph`/`.devmind/vectors` JSON output paths that a live node's file_path
+     * still maps to, but that are occupied by a stray DIRECTORY instead of a file — the case
+     * `isDegenerateDiskJsonPath`'s existsSync+isDirectory branch refuses to write over. Left
+     * behind by some earlier node whose file_path once collapsed onto that exact path (see that
+     * method's comment for how); once the directory exists, `writeGraphToDisk`/`writeVectorsToDisk`
+     * can only skip-and-warn forever, since neither one ever deletes anything. This is what
+     * `devsmind analyze --fix` uses to actually remove the blocker and re-trigger the write, so a
+     * perfectly healthy node's file stops being warned about on every future sync.
+     *
+     * Deliberately mirrors ONLY the third of `isDegenerateDiskJsonPath`'s three checks (never the
+     * first two — an empty/trailing-slash/`..`-collapsing diskRelPath means the node's OWN
+     * file_path is degenerate, already covered by `missingFile` above and fixed by deprecating the
+     * node, not by deleting anything on disk). Skipping those here is required for safety: a
+     * collapsed diskRelPath would make `targetPath` resolve to `graphDir`/`vectorsDir` itself (or
+     * an ancestor of it), and blindly reporting that as "stray" would recommend deleting the whole
+     * output tree.
+     */
+    findStrayOutputDirs(): {
+        file_path: string;
+        target: string;
+        kind: 'graph' | 'vectors';
+    }[];
     pruneSpuriousNodes(workspaceRoot: string): {
         prunedCount: number;
         prunedNodes: string[];
@@ -993,6 +1016,18 @@ export declare class DevMindDatabase {
      * the write, never touches the node.
      */
     private isDegenerateDiskJsonPath;
+    /**
+     * True when `filePath` ITSELF can never resolve to a valid `graph/`/`vectors/` JSON target —
+     * i.e. `isDegenerateDiskJsonPath`'s first two checks (empty/trailing-slash/`..`-collapsing
+     * `diskRelPath`), never its third (existsSync+isDirectory, which is about a stray directory
+     * left on disk, not about the file_path being bad — that case is exactly what
+     * `findStrayOutputDirs` fixes, and can legitimately happen for a perfectly healthy file_path,
+     * so it must NOT be treated as permanent here). Deliberately does no filesystem I/O — pure
+     * string logic, cheap enough to call for every distinct file_path a full `syncToDisk` touches.
+     * Used to recognize a file_path that's structurally unfixable no matter how many times a write
+     * is retried, as opposed to one that's merely blocked by removable disk cruft.
+     */
+    private isFilePathStructurallyDegenerate;
     writeGraphToDisk(filePath: string): void;
     /**
      * Mirrors `writeGraphToDisk` exactly (same file-matching logic, same directory shape) but into
@@ -1012,6 +1047,16 @@ export declare class DevMindDatabase {
      * the DB, or after a past write silently failed (e.g. the directory-typed file_path bug
      * `isDegenerateDiskJsonPath` now catches) — so leaving vectors out of the force-resync
      * defeated half the point of running it.
+     *
+     * A file_path shared by at least one ACTIVE node is always re-attempted, deprecated or not —
+     * a deprecated node sharing a real file with a live one still needs its `deprecated:1` flag
+     * kept current on disk. A file_path held ONLY by deprecated nodes is skipped when it's also
+     * `isFilePathStructurallyDegenerate` (a directory rather than a file — `deprecateNode` already
+     * wrote it once, at the moment it was deprecated, so nothing new would come of retrying):
+     * without this, a node deprecated for exactly this reason produced the identical "Skipped
+     * writing graph JSON" warning on every single future `sync`, forever, since deprecating a node
+     * never clears its (already-garbage) file_path — indistinguishable from the bug never having
+     * been fixed at all.
      */
     syncToDisk(): void;
 }

package/dist/db/database.js

@@ -2822,6 +2822,58 @@ class DevMindDatabase {
         }
         return { spurious, missingFile };
     }
+    /**
+     * Finds `.devmind/graph`/`.devmind/vectors` JSON output paths that a live node's file_path
+     * still maps to, but that are occupied by a stray DIRECTORY instead of a file — the case
+     * `isDegenerateDiskJsonPath`'s existsSync+isDirectory branch refuses to write over. Left
+     * behind by some earlier node whose file_path once collapsed onto that exact path (see that
+     * method's comment for how); once the directory exists, `writeGraphToDisk`/`writeVectorsToDisk`
+     * can only skip-and-warn forever, since neither one ever deletes anything. This is what
+     * `devsmind analyze --fix` uses to actually remove the blocker and re-trigger the write, so a
+     * perfectly healthy node's file stops being warned about on every future sync.
+     *
+     * Deliberately mirrors ONLY the third of `isDegenerateDiskJsonPath`'s three checks (never the
+     * first two — an empty/trailing-slash/`..`-collapsing diskRelPath means the node's OWN
+     * file_path is degenerate, already covered by `missingFile` above and fixed by deprecating the
+     * node, not by deleting anything on disk). Skipping those here is required for safety: a
+     * collapsed diskRelPath would make `targetPath` resolve to `graphDir`/`vectorsDir` itself (or
+     * an ancestor of it), and blindly reporting that as "stray" would recommend deleting the whole
+     * output tree.
+     */
+    findStrayOutputDirs() {
+        const rows = this.db.prepare('SELECT DISTINCT file_path FROM nodes').all();
+        const filePaths = new Set();
+        for (const row of rows) {
+            if (row.file_path) {
+                for (const p of row.file_path.split(',').map(s => s.trim()).filter(Boolean)) {
+                    filePaths.add(p);
+                }
+            }
+        }
+        const workspaceRoot = (0, config_1.canonicalizePath)(path.dirname(this.dbPath));
+        const dirsByKind = [
+            { dir: path.join(workspaceRoot, 'graph'), kind: 'graph' },
+            { dir: path.join(workspaceRoot, 'vectors'), kind: 'vectors' },
+        ];
+        const results = [];
+        for (const filePath of filePaths) {
+            const absPath = (0, config_1.canonicalizePath)(filePath);
+            const repoRelPath = this.toRepoRelativePath(absPath);
+            const diskRelPath = repoRelPath.replace(/^\{([^}]+)\}/, '$1').replace(/\.[^/.]+$/, '.json');
+            if (!diskRelPath || diskRelPath.endsWith('/') || diskRelPath.endsWith('\\'))
+                continue;
+            for (const { dir, kind } of dirsByKind) {
+                const targetPath = path.join(dir, diskRelPath);
+                const relToContainer = path.relative(dir, targetPath);
+                if (relToContainer === '' || relToContainer.startsWith('..'))
+                    continue;
+                if (fs.existsSync(targetPath) && fs.statSync(targetPath).isDirectory()) {
+                    results.push({ file_path: filePath, target: targetPath, kind });
+                }
+            }
+        }
+        return results;
+    }
     pruneSpuriousNodes(workspaceRoot) {
         const { spurious, missingFile } = this.findSpuriousAndMissingFileNodes(workspaceRoot);
         const candidates = [...spurious, ...missingFile];
@@ -3393,6 +3445,28 @@ class DevMindDatabase {
             return true;
         return fs.existsSync(targetPath) && fs.statSync(targetPath).isDirectory();
     }
+    /**
+     * True when `filePath` ITSELF can never resolve to a valid `graph/`/`vectors/` JSON target —
+     * i.e. `isDegenerateDiskJsonPath`'s first two checks (empty/trailing-slash/`..`-collapsing
+     * `diskRelPath`), never its third (existsSync+isDirectory, which is about a stray directory
+     * left on disk, not about the file_path being bad — that case is exactly what
+     * `findStrayOutputDirs` fixes, and can legitimately happen for a perfectly healthy file_path,
+     * so it must NOT be treated as permanent here). Deliberately does no filesystem I/O — pure
+     * string logic, cheap enough to call for every distinct file_path a full `syncToDisk` touches.
+     * Used to recognize a file_path that's structurally unfixable no matter how many times a write
+     * is retried, as opposed to one that's merely blocked by removable disk cruft.
+     */
+    isFilePathStructurallyDegenerate(filePath) {
+        const workspaceRoot = (0, config_1.canonicalizePath)(path.dirname(this.dbPath));
+        const absPath = (0, config_1.canonicalizePath)(filePath);
+        const repoRelPath = this.toRepoRelativePath(absPath);
+        const diskRelPath = repoRelPath.replace(/^\{([^}]+)\}/, '$1').replace(/\.[^/.]+$/, '.json');
+        if (!diskRelPath || diskRelPath.endsWith('/') || diskRelPath.endsWith('\\'))
+            return true;
+        const graphDir = path.join(workspaceRoot, 'graph');
+        const relToContainer = path.relative(graphDir, path.join(graphDir, diskRelPath));
+        return relToContainer === '' || relToContainer.startsWith('..');
+    }
     writeGraphToDisk(filePath) {
         try {
             if (!filePath)
@@ -3538,16 +3612,35 @@ class DevMindDatabase {
      * the DB, or after a past write silently failed (e.g. the directory-typed file_path bug
      * `isDegenerateDiskJsonPath` now catches) — so leaving vectors out of the force-resync
      * defeated half the point of running it.
+     *
+     * A file_path shared by at least one ACTIVE node is always re-attempted, deprecated or not —
+     * a deprecated node sharing a real file with a live one still needs its `deprecated:1` flag
+     * kept current on disk. A file_path held ONLY by deprecated nodes is skipped when it's also
+     * `isFilePathStructurallyDegenerate` (a directory rather than a file — `deprecateNode` already
+     * wrote it once, at the moment it was deprecated, so nothing new would come of retrying):
+     * without this, a node deprecated for exactly this reason produced the identical "Skipped
+     * writing graph JSON" warning on every single future `sync`, forever, since deprecating a node
+     * never clears its (already-garbage) file_path — indistinguishable from the bug never having
+     * been fixed at all.
      */
     syncToDisk() {
         try {
-            const rows = this.db.prepare('SELECT DISTINCT file_path FROM nodes').all();
-            const filePaths = new Set();
+            const rows = this.db.prepare('SELECT DISTINCT file_path, deprecated FROM nodes').all();
+            const activeFilePaths = new Set();
+            const allFilePaths = new Set();
             for (const row of rows) {
-                if (row.file_path) {
-                    for (const p of row.file_path.split(',').map(s => s.trim()).filter(Boolean)) {
-                        filePaths.add(p);
-                    }
+                if (!row.file_path)
+                    continue;
+                for (const p of row.file_path.split(',').map(s => s.trim()).filter(Boolean)) {
+                    allFilePaths.add(p);
+                    if (!row.deprecated)
+                        activeFilePaths.add(p);
+                }
+            }
+            const filePaths = new Set();
+            for (const p of allFilePaths) {
+                if (activeFilePaths.has(p) || !this.isFilePathStructurallyDegenerate(p)) {
+                    filePaths.add(p);
                 }
             }
             for (const filePath of filePaths) {