devlyn-cli 3.2.1 → 3.3.0

package/benchmark/auto-resolve/scripts/run-fixture.sh

@@ -1,1024 +0,0 @@
-#!/usr/bin/env bash
-# run-fixture.sh — run ONE fixture, ONE arm, end-to-end. Self-contained.
-#
-# Prepares a fresh work dir, applies setup, invokes the arm via `claude -p`
-# subprocess (isolated session), then captures artifacts + runs verification.
-#
-# Usage:
-#   run-fixture.sh --fixture <FID> --arm <variant|solo_claude|bare|l2_gated|l2_risk_probes|l2_forced> --run-id <ID>
-#   run-fixture.sh --fixture <FID> --arm <variant|solo_claude|bare|l2_gated|l2_risk_probes|l2_forced> --run-id <ID> --dry-run
-#
-# Outputs to benchmark/auto-resolve/results/<run-id>/<fixture>/<arm>/:
-#   input.md, transcript.txt, diff.patch, changed-files.txt, verify.json,
-#   timing.json, result.json, setup.log (if setup ran)
-
-set -euo pipefail
-
-usage() {
-  echo "usage: $0 --fixture <FID> --arm <variant|solo_claude|bare|l2_gated|l2_risk_probes|l2_forced> --run-id <ID> [--resolve-skill new] [--engines-config '<json>'] [--dry-run]"
-  exit 1
-}
-
-require_value() {
-  local flag="$1"
-  local value="${2:-}"
-  if [ -z "$value" ] || [[ "$value" == --* ]]; then
-    echo "$flag requires a value" >&2
-    exit 1
-  fi
-}
-
-kill_worktree_processes() {
-  local work_dir="$1"
-  local signal="$2"
-  local physical_work_dir current_pgid
-  physical_work_dir="$(cd "$work_dir" 2>/dev/null && pwd -P || printf '%s' "$work_dir")"
-  current_pgid="$(ps -o pgid= -p "$$" | tr -d ' ')"
-  ps -axo pid=,pgid=,command= \
-    | awk -v p1="$work_dir" -v p2="$physical_work_dir" -v self="$$" -v current_pgid="$current_pgid" '
-        $1 != self && $2 != current_pgid && (index($0, p1) || index($0, p2)) { print $2 }
-      ' \
-    | sort -u \
-    | while IFS= read -r pgid; do
-        [ -n "$pgid" ] || continue
-        kill "-$signal" -- "-$pgid" 2>/dev/null || true
-      done
-}
-
-FIXTURE=""; ARM=""; RUN_ID=""; DRY_RUN=0
-RESOLVE_SKILL="new"
-ENGINES_CONFIG=""
-while [ $# -gt 0 ]; do
-  case "$1" in
-    --fixture)        require_value "$1" "${2:-}"; FIXTURE="$2"; shift 2;;
-    --arm)            require_value "$1" "${2:-}"; ARM="$2";     shift 2;;
-    --run-id)         require_value "$1" "${2:-}"; RUN_ID="$2";  shift 2;;
-    --resolve-skill)  require_value "$1" "${2:-}"; RESOLVE_SKILL="$2"; shift 2;;
-    --engines-config) require_value "$1" "${2:-}"; ENGINES_CONFIG="$2"; shift 2;;
-    --dry-run)        DRY_RUN=1;    shift;;
-    *) usage;;
-  esac
-done
-[ -n "$FIXTURE" ] && [ -n "$ARM" ] && [ -n "$RUN_ID" ] || usage
-
-# iter-0038: --engines-config stages a machine-config role pin
-# (.devlyn/engines.json) into the arm worktree so engine COMBINATIONS are
-# runnable as variant-class arms without new hardcoded arm names. Existing
-# arm launch commands are untouched when the flag is absent. Fail fast on
-# malformed JSON, and refuse bare (no skills — the config would be dead
-# weight that silently mis-labels the arm as configured).
-if [ -n "$ENGINES_CONFIG" ]; then
-  if [ "$ARM" = "bare" ]; then
-    echo "--engines-config is invalid for the bare arm (no skills consume it)" >&2
-    exit 1
-  fi
-  if ! printf '%s' "$ENGINES_CONFIG" | python3 -c 'import json,sys; json.load(sys.stdin)' 2>/dev/null; then
-    echo "--engines-config is not valid JSON" >&2
-    exit 1
-  fi
-fi
-# iter-0019/0037: 3 smoke arms — variant (L2: Claude orchestrator + risk-probes pair path),
-# solo_claude (L1: Claude orchestrator, codex blocked by shim+wrapper enforcement),
-# bare (L0: direct claude -p, no skill, no codex).
-# iter-0033c (Codex R0-infra adoption, 2026-05-02): two L2 diagnostic arms for /devlyn:resolve —
-# l2_gated (--engine claude, no --pair-verify; pair fires only on natural triggers),
-# l2_risk_probes (--engine claude --risk-probes; pair converts visible Verification bullets to executable probes before IMPLEMENT),
-# l2_forced (--engine claude --pair-verify; retired because it leaks pair-awareness before IMPLEMENT).
-[ "$ARM" = "variant" ] || [ "$ARM" = "solo_claude" ] || [ "$ARM" = "bare" ] \
-  || [ "$ARM" = "l2_gated" ] || [ "$ARM" = "l2_risk_probes" ] || [ "$ARM" = "l2_forced" ] || \
-  { echo "arm must be variant|solo_claude|bare|l2_gated|l2_risk_probes|l2_forced"; exit 1; }
-# iter-0033c (Codex R0-infra Q2): l2_* arms require NEW skill surface (only NEW
-# `/devlyn:resolve` honors --pair-verify; OLD `/devlyn:auto-resolve` would silently
-# ignore the flag and produce mis-attributed L2 numbers).
-if { [ "$ARM" = "l2_gated" ] || [ "$ARM" = "l2_risk_probes" ] || [ "$ARM" = "l2_forced" ]; } && [ "$RESOLVE_SKILL" != "new" ]; then
-  echo "l2_* arms require --resolve-skill new (got '$RESOLVE_SKILL')"; exit 1
-fi
-if [ "$ARM" = "l2_forced" ]; then
-  echo "l2_forced is retired: it puts --pair-verify in the initial prompt, so IMPLEMENT can become pair-aware before the diff is frozen. Use scripts/run-frozen-verify-pair.sh for leak-free VERIFY-pair measurement." >&2
-  exit 1
-fi
-# iter-0034 Phase 4 cutover (2026-05-03): OLD `/devlyn:auto-resolve` was
-# deleted. Only `new` (= /devlyn:resolve --spec) is supported. The flag stays
-# an accepted no-op so historical runners (run-iter-0033c.sh:137) keep working
-# unchanged. `old` is hard-errored — silently downgrading to `new` would
-# produce mis-attributed results in any pre-cutover replay attempt.
-if [ "$RESOLVE_SKILL" = "old" ]; then
-  echo "--resolve-skill old is no longer supported: /devlyn:auto-resolve was deleted in the iter-0034 Phase 4 cutover. Use --resolve-skill new (default) or omit the flag." >&2
-  exit 1
-fi
-[ "$RESOLVE_SKILL" = "new" ] || \
-  { echo "--resolve-skill must be 'new' (got '$RESOLVE_SKILL')"; exit 1; }
-
-BENCH_ROOT="$(cd "$(dirname "$0")/.." && pwd)"
-REPO_ROOT="$(cd "$BENCH_ROOT/../.." && pwd)"
-
-FIX_DIR=""
-for candidate in "$BENCH_ROOT/fixtures/$FIXTURE" "$BENCH_ROOT/shadow-fixtures/$FIXTURE"; do
-  if [ -d "$candidate" ]; then FIX_DIR="$candidate"; break; fi
-done
-[ -n "$FIX_DIR" ] || { echo "fixture not found in fixtures/ or shadow-fixtures/: $FIXTURE"; exit 1; }
-
-META="$FIX_DIR/metadata.json"
-EXPECTED="$FIX_DIR/expected.json"
-SPEC="$FIX_DIR/spec.md"
-TASK="$FIX_DIR/task.txt"
-SETUP="$FIX_DIR/setup.sh"
-for f in "$META" "$EXPECTED" "$SPEC" "$TASK"; do
-  [ -f "$f" ] || { echo "fixture missing required file: $f (see SCHEMA.md)"; exit 1; }
-done
-
-TIMEOUT=$(python3 - "$META" "$BENCH_ROOT/scripts" <<'PY'
-import pathlib
-import sys
-
-sys.path.insert(0, sys.argv[2])
-from pair_evidence_contract import loads_strict_json_object
-
-metadata = loads_strict_json_object(pathlib.Path(sys.argv[1]).read_text())
-timeout = metadata.get("timeout_seconds")
-if not isinstance(timeout, int) or isinstance(timeout, bool) or timeout <= 0:
-    raise SystemExit("metadata timeout_seconds must be a positive integer")
-print(timeout)
-PY
-)
-if [ "$ARM" = "variant" ] || [ "$ARM" = "l2_risk_probes" ]; then
-  # This arm adds a bounded Codex probe-derive phase before IMPLEMENT and a
-  # bounded Codex pair-JUDGE during VERIFY. The full-pipeline gate still
-  # enforces wall-time efficiency by pair/solo ratio; this budget prevents a
-  # false timeout before the mandatory second judge can emit its contract line.
-  TIMEOUT=$((TIMEOUT + 600))
-fi
-
-RESULT_DIR="$BENCH_ROOT/results/$RUN_ID/$FIXTURE/$ARM"
-mkdir -p "$RESULT_DIR"
-
-# Fresh copy of test-repo — order matters. We copy arm-env files (skills,
-# CLAUDE.md) BEFORE the baseline commit so they do NOT appear in the diff
-# the arm produces. That keeps diff.patch focused on the arm's actual code
-# changes, so forbidden-pattern scans and judge rubrics see only real work.
-WORK_DIR="/tmp/bench-${RUN_ID}-${FIXTURE}-${ARM}"
-rm -rf "$WORK_DIR"
-cp -R "$BENCH_ROOT/fixtures/test-repo" "$WORK_DIR"
-
-# All skill-driven arms (variant / solo_claude / l2_gated / l2_risk_probes /
-# l2_forced) get devlyn skills + project CLAUDE.md pre-baseline + codex shim
-# + monitored wrapper. Bare gets nothing (no skill, no shim, no env).
-#
-# iter-0019: solo_claude (L1) shares variant-arm staging because the L1 arm
-# runs the same orchestrator on the same skills — only difference is codex
-# is blocked. Shim catches PATH resolution; wrapper catches direct-path
-# invocations.
-# iter-0033c/0037 (Codex R0-infra Q6 + risk probes): pair arms share variant
-# staging (codex unblocked, shim+wrapper routing). The smoke `variant` arm now
-# follows the current measured risk-probes path rather than an older
-# auto-engine implement route.
-if [ "$ARM" = "variant" ] || [ "$ARM" = "solo_claude" ] \
-   || [ "$ARM" = "l2_gated" ] || [ "$ARM" = "l2_risk_probes" ] || [ "$ARM" = "l2_forced" ]; then
-  mkdir -p "$WORK_DIR/.claude"
-  if [ -d "$REPO_ROOT/.claude/skills" ]; then
-    cp -R "$REPO_ROOT/.claude/skills" "$WORK_DIR/.claude/skills"
-  else
-    echo "warning: $REPO_ROOT/.claude/skills missing — $ARM may lack project skills" >&2
-  fi
-  if [ -f "$REPO_ROOT/CLAUDE.md" ]; then
-    cp "$REPO_ROOT/CLAUDE.md" "$WORK_DIR/CLAUDE.md"
-  fi
-  # iter-0038: stage the engine role pin (validated above) pre-baseline.
-  # test-repo/.gitignore covers .devlyn, so it never enters scaffold commits
-  # or arm diffs. A verbatim copy lands in RESULT_DIR as run evidence.
-  if [ -n "$ENGINES_CONFIG" ]; then
-    mkdir -p "$WORK_DIR/.devlyn"
-    printf '%s\n' "$ENGINES_CONFIG" > "$WORK_DIR/.devlyn/engines.json"
-    printf '%s\n' "$ENGINES_CONFIG" > "$RESULT_DIR/engines-config.json"
-  fi
-  # Stage the codex PATH shim. Required for both variant (route to monitored
-  # wrapper) and solo_claude (CODEX_BLOCKED enforcement at PATH layer).
-  if command -v codex >/dev/null 2>&1; then
-    CODEX_REAL_BIN="$(command -v codex)"
-    SHIM_SRC="$REPO_ROOT/scripts/codex-shim/codex"
-    WRAPPER_SRC="$REPO_ROOT/config/skills/_shared/codex-monitored.sh"
-    if [ ! -x "$SHIM_SRC" ] || [ ! -r "$WRAPPER_SRC" ]; then
-      echo "fatal: iter-0009 shim/wrapper missing at $SHIM_SRC / $WRAPPER_SRC" >&2
-      exit 1
-    fi
-    mkdir -p "$WORK_DIR/.devlyn-bin"
-    cp "$SHIM_SRC" "$WORK_DIR/.devlyn-bin/codex"
-    chmod +x "$WORK_DIR/.devlyn-bin/codex"
-    CODEX_MONITORED_PATH="$WORK_DIR/.claude/skills/_shared/codex-monitored.sh"
-    [ -r "$CODEX_MONITORED_PATH" ] || {
-      echo "fatal: codex-monitored.sh not present in staged skills at $CODEX_MONITORED_PATH" >&2
-      exit 1
-    }
-    export CODEX_REAL_BIN CODEX_MONITORED_PATH
-    SNAPSHOT_PATH=$(grep -m1 '^export PATH=' \
-      "$HOME/.claude/shell-snapshots/snapshot-zsh-"*.sh 2>/dev/null \
-      | head -1 | sed 's/^[^=]*=//' | tr -d '"' || true)
-    [ -n "$SNAPSHOT_PATH" ] || SNAPSHOT_PATH="$PATH"
-    INJECTED_PATH="$WORK_DIR/.devlyn-bin:$SNAPSHOT_PATH"
-    # iter-0019: arm-specific env. variant gets the codex routing pair;
-    # solo_claude gets CODEX_BLOCKED=1 (shim + wrapper both refuse).
-    # iter-0019.5 (Codex R1, 2026-04-28): when ARM=solo_claude, OMIT
-    # CODEX_REAL_BIN + CODEX_MONITORED_PATH from the env block. Reason: the
-    # absolute path to the real codex binary in CODEX_REAL_BIN is itself
-    # the bypass weapon — the orchestrator could `Bash("$CODEX_REAL_BIN
-    # exec ...")` and reach real codex, defeating both shim (PATH lookup
-    # bypassed) and wrapper (codex-monitored.sh not invoked). With the
-    # var absent: shim's BLOCKED check fires before it needs CODEX_REAL_BIN
-    # so removing it doesn't break the shim path; if CODEX_BLOCKED is
-    # somehow unset later, the shim now FAILS CLOSED (no real binary to
-    # delegate to) rather than silently delegating. The earlier "diagnostic
-    # visibility" justification was inverted — it handed the orchestrator
-    # the bypass weapon. Across iter-0019 paid 5-fixture run the bypass
-    # was OPEN but never exercised; this closes the surface preemptively
-    # before iter-0020's 9-fixture L0/L1/L2 run.
-    # iter-0033c/0037 (Codex R0-infra Q5 + risk probes): l2_* arms are codex-UNBLOCKED
-    # (codex must be reachable for VERIFY pair-JUDGE). They take the variant
-    # path: ARM_CODEX_BLOCKED=0 → python writer omits CODEX_BLOCKED from env
-    # entirely (the shim refuses on any non-empty value, so 0 ≠ unset).
-    if [ "$ARM" = "solo_claude" ]; then
-      ARM_CODEX_BLOCKED=1
-    else
-      ARM_CODEX_BLOCKED=0
-    fi
-    python3 - "$WORK_DIR/.claude/settings.json" \
-      "$INJECTED_PATH" "$CODEX_REAL_BIN" "$CODEX_MONITORED_PATH" "$ARM_CODEX_BLOCKED" "$ARM" <<'PY'
-import json, sys
-out_path, path_val, real_bin, monitored, codex_blocked, arm = sys.argv[1:7]
-env = {
-    "CLAUDE_CODE_EXPERIMENTAL_AGENT_TEAMS": "1",
-    "CLAUDE_CODE_DISABLE_NONESSENTIAL_TRAFFIC": "1",
-    "DISABLE_AUTOUPDATER": "1",
-    "PATH": path_val,
-}
-if codex_blocked == "1":
-    # iter-0019.5: solo_claude (L1 arm) — codex blocked at binary layer.
-    # Do NOT export CODEX_REAL_BIN / CODEX_MONITORED_PATH to the
-    # orchestrator subshell; those vars become bypass weapons under any
-    # CODEX_BLOCKED enforcement gap.
-    env["CODEX_BLOCKED"] = "1"
-else:
-    # variant / pair arms — codex routes through wrapper for risk-probe
-    # derivation and VERIFY pair-JUDGE; both vars are required by the
-    # shim/wrapper handshake.
-    env["CODEX_REAL_BIN"] = real_bin
-    env["CODEX_MONITORED_PATH"] = monitored
-    if arm in ("variant", "l2_risk_probes"):
-        # Risk-probe derivation is a bounded contract-conversion step. A long
-        # Codex run is a harness failure, not useful extra quality signal.
-        env["CODEX_MONITORED_TIMEOUT_SEC"] = "300"
-data = {"env": env}
-with open(out_path, "w") as f:
-    json.dump(data, f, indent=2)
-    f.write("\n")
-PY
-  else
-    echo "warning: codex not on PATH — $ARM cannot exercise iter-0009 wrapper / iter-0019 BLOCKED enforcement" >&2
-    CODEX_REAL_BIN=""
-    CODEX_MONITORED_PATH=""
-  fi
-fi
-
-(cd "$WORK_DIR" \
-   && git init -q \
-   && git add -A \
-   && git -c user.email=b@b -c user.name=b commit -q -m baseline) \
-  || { echo "baseline git init failed"; exit 1; }
-
-# Native security-review Skill expects `refs/remotes/origin/HEAD` to identify
-# the diff surface. Fresh `git init` has no remote, which made a prior F8 run
-# spend ~56 minutes inside CRITIC recovering this manually. Configure a
-# synthetic origin pointing at the work dir itself (no network I/O) and
-# wire origin/HEAD → origin/<current-branch> so security-review resolves
-# immediately.
-(
-  cd "$WORK_DIR"
-  git remote add origin "$WORK_DIR" 2>/dev/null || true
-  BRANCH=$(git branch --show-current 2>/dev/null || echo master)
-  git update-ref "refs/remotes/origin/$BRANCH" HEAD 2>/dev/null || true
-  git symbolic-ref refs/remotes/origin/HEAD "refs/remotes/origin/$BRANCH" 2>/dev/null || true
-) >/dev/null 2>&1 || true
-
-# Fixture-specific setup (applied post-baseline so the diff shows fixture
-# framing as part of the arm's environment, not its work product). Commit
-# failures here break arm-only diff isolation, so fail loudly.
-if [ -f "$SETUP" ] && [ -s "$SETUP" ]; then
-  chmod +x "$SETUP"
-  if ! (cd "$WORK_DIR" && "$SETUP") > "$RESULT_DIR/setup.log" 2>&1; then
-    echo "setup.sh failed; see $RESULT_DIR/setup.log"
-    exit 1
-  fi
-  if ! (cd "$WORK_DIR" \
-          && git add -A \
-          && git -c user.email=b@b -c user.name=b commit -q --allow-empty -m "fixture-setup"); then
-    echo "fixture-setup commit failed — arm diff isolation broken"
-    exit 1
-  fi
-fi
-
-# iter-0019.6: stage normalized .devlyn/spec-verify.json for BUILD_GATE.
-# Only commands safe to reveal before IMPLEMENT may be staged here. Commands
-# that reference BENCH_FIXTURE_DIR are hidden post-run oracles; staging their
-# path leaks verifier names into the arm and lets agents search for answer-key
-# files. Those commands still run in the post-run verifier below.
-if [ "$ARM" = "variant" ] || [ "$ARM" = "solo_claude" ] \
-   || [ "$ARM" = "l2_gated" ] || [ "$ARM" = "l2_risk_probes" ] || [ "$ARM" = "l2_forced" ]; then
-  python3 - "$EXPECTED" "$WORK_DIR/.devlyn/spec-verify.json" "$BENCH_ROOT/scripts" <<'PY'
-import json, os, pathlib, sys
-sys.path.insert(0, sys.argv[3])
-from pair_evidence_contract import loads_strict_json_object
-
-expected = loads_strict_json_object(pathlib.Path(sys.argv[1]).read_text())
-out_path = sys.argv[2]
-visible_commands = [
-    cmd for cmd in expected.get("verification_commands", [])
-    if "BENCH_FIXTURE_DIR" not in str(cmd.get("cmd", ""))
-]
-normalized = {"verification_commands": visible_commands}
-os.makedirs(os.path.dirname(out_path), exist_ok=True)
-if not visible_commands:
-    raise SystemExit(0)
-with open(out_path, "w") as f:
-    json.dump(normalized, f, indent=2)
-    f.write("\n")
-PY
-fi
-
-# Build arm-specific prompt + place arm-specific environment files. Anything
-# that's "benchmark scaffolding" (spec path placement, prompt wrapper) is
-# committed to the work repo as a separate pre-model commit so the model's
-# diff shows only its own work.
-#
-# Per-arm prompt selection is:
-#   1. Fixture-id-aware for F9 (end-to-end novice fixture, no pre-placed spec).
-#   2. Spec-mode `/devlyn:resolve --spec <path>` for the rest (post iter-0034
-#      Phase 4 cutover the OLD `/devlyn:auto-resolve` route was deleted).
-PROMPT_FILE="$RESULT_DIR/input.md"
-# Variant uses the current measured risk-probes pair path; solo_claude uses
-# --engine claude explicitly so the orchestrator routes every implementation
-# phase to Claude and never tries to invoke codex. The CODEX_BLOCKED shim
-# enforces this at the binary layer if the orchestrator misroutes. Both arms
-# pass the engine flag explicitly so they survive future runtime-default
-# changes (post iter-0020 close-out: default flipped to claude).
-if [ "$ARM" = "variant" ] || [ "$ARM" = "solo_claude" ] \
-   || [ "$ARM" = "l2_gated" ] || [ "$ARM" = "l2_risk_probes" ] || [ "$ARM" = "l2_forced" ]; then
-  case "$ARM" in
-    solo_claude)
-      # L1 = pure solo by construction. --no-risk-probes --no-pair so a high-risk
-      # spec measures Claude-only solo deterministically instead of auto-escalating
-      # toward the (blocked) OTHER engine. Without these, a security/high-risk
-      # fixture auto-triggers the cross-engine path and the arm mis-measures L1.
-      ENGINE_CLAUSE="--engine claude --no-risk-probes --no-pair"
-      ENGINE_PROMPT_HINT="Run with \`--engine claude --no-risk-probes --no-pair\` for every phase — pure solo L1. Codex must not be invoked — the harness has blocked it at the binary layer for this run."
-      ;;
-    variant)
-      ENGINE_CLAUSE="--engine claude --risk-probes"
-      ENGINE_PROMPT_HINT="Run with \`--engine claude --risk-probes\` so the smoke L2 arm uses the current measured pair path: Claude implements, Codex derives bounded visible-verification probes and can act as VERIFY pair-JUDGE."
-      ;;
-    l2_gated)
-      # NEW L2 with natural pair-mode triggers. Claude does IMPLEMENT;
-      # pair-JUDGE in VERIFY fires per /devlyn:resolve PHASE 5 policy
-      # (high complexity, coverage_failed, or warning-level mechanical
-      # findings; never after HIGH/CRITICAL mechanical blockers). Codex
-      # remains available as the OTHER-engine pair-JUDGE candidate.
-      ENGINE_CLAUSE="--engine claude"
-      ENGINE_PROMPT_HINT="Run with \`--engine claude\` and let the orchestrator's pair-mode (VERIFY) trigger naturally per its policy. Codex is available as the OTHER-engine pair-JUDGE — the harness has not blocked it. Do NOT pass \`--pair-verify\`; this arm measures gated triggering."
-      ;;
-    l2_risk_probes)
-      # NEW L2 probe-derive arm. Claude plans/implements; Codex is used before
-      # IMPLEMENT only to derive bounded executable probes from visible
-      # Verification bullets. BUILD_GATE and VERIFY execute those probes
-      # mechanically via spec-verify-check.py.
-      ENGINE_CLAUSE="--engine claude --risk-probes"
-      ENGINE_PROMPT_HINT="Run with \`--engine claude --risk-probes\`. Codex is available as the OTHER-engine probe derivation and pair-JUDGE engine. The probe phase may only derive executable checks from visible \`## Verification\` text; it must not read hidden fixture/verifier paths."
-      ;;
-    l2_forced)
-      # iter-0033c: NEW L2 forced — pair-JUDGE always fires. Diagnostic arm
-      # for Gate 6 fixture-level cross-check + Gate 7 attribution causality.
-      ENGINE_CLAUSE="--engine claude --pair-verify"
-      ENGINE_PROMPT_HINT="Run with \`--engine claude --pair-verify\` so VERIFY pair-mode fires unconditionally. Codex is the OTHER-engine pair-JUDGE."
-      ;;
-  esac
-  if [ "$FIXTURE" = "F9-e2e-ideate-to-resolve" ]; then
-    # F9 NEW chain (iter-0033a): /devlyn:ideate --quick → /devlyn:resolve
-    # --spec <emitted-path>. No pre-placed spec; the variant arm generates it
-    # via ideate. No preflight (folded into resolve's VERIFY phase).
-    #
-    # --quick is mandatory in autonomous (claude -p) mode: default ideate
-    # invokes interactive Q&A which has no human to answer in a benchmark
-    # subprocess — the agent asks questions and stops. --quick uses
-    # single-turn assume-and-confirm: AI synthesizes the spec from the goal
-    # plus an explicit assumptions block, so the chain proceeds end-to-end
-    # without user input. Smoke 3 (iter-0033a, 2026-04-30) caught this:
-    # default-mode F9 produced empty diffs after 54s of Q&A waiting.
-    cat > "$PROMPT_FILE" <<EOF
-You are a first-time devlyn-cli user. You have a vague idea and want the 2-skill harness to take it from unstructured ask to shipped, verified feature. Run the chain:
-
-1. Invoke \`/devlyn:ideate --quick ${ENGINE_CLAUSE}\` to turn the idea into a verifiable spec. \`--quick\` is mandatory: this is an autonomous run with no human to answer interactive questions, so ideate must synthesize the spec single-turn from the goal text and emit assumptions explicitly. The skill announces \`spec ready — /devlyn:resolve --spec <emitted-path>\` when done. The emitted spec lives at \`docs/specs/<id>-<slug>/spec.md\` with a sibling \`spec.expected.json\`.
-2. Take the emitted spec path verbatim from the announce line and invoke \`/devlyn:resolve --spec <that-path> ${ENGINE_CLAUSE}\` to run PLAN → IMPLEMENT → BUILD_GATE → CLEANUP → VERIFY (VERIFY is the fresh-subagent final phase — there is no separate preflight skill in the 2-skill design).
-
-${ENGINE_PROMPT_HINT}
-
-Follow the skills to completion. Do not short-circuit. Do not invoke \`/devlyn:auto-resolve\` or \`/devlyn:preflight\` — they are not part of the 2-skill chain. Do not stop after ideate; the chain only counts as complete after \`/devlyn:resolve\` returns a terminal verdict.
-
-After the whole chain, briefly report: (a) the spec path ideate produced, (b) the resolve terminal verdict, (c) whether VERIFY surfaced any findings.
-
-RAW IDEA:
-$(cat "$TASK")
-EOF
-  else
-    # Spec-mode /devlyn:resolve: spec pre-placed at the canonical roadmap path
-    # the harness has used since iter-0019. Pre-Phase-4 this branch shared
-    # staging with the OLD /devlyn:auto-resolve route; iter-0034 deleted the
-    # OLD branch and this is now the only non-F9 path.
-    mkdir -p "$WORK_DIR/docs/roadmap/phase-1"
-    cp "$SPEC" "$WORK_DIR/docs/roadmap/phase-1/$FIXTURE.md"
-    # iter-0049: fixtures keep spec.md prose-only (expected.json is the real
-    # carrier, validated separately by lint-fixtures.sh) but spec-verify-check.py
-    # now locates the visible ## Verification prose via a <!-- devlyn:verification -->
-    # sentinel rather than the English header text. Inject it into the WORK_DIR
-    # copy only, so risk-probe derived_from substring matching still finds the
-    # section during a run; the source fixture repo stays untouched.
-    if ! grep -q '<!-- devlyn:verification -->' "$WORK_DIR/docs/roadmap/phase-1/$FIXTURE.md"; then
-      sed -i.bak 's/^## Verification\b/<!-- devlyn:verification -->\n## Verification/' \
-        "$WORK_DIR/docs/roadmap/phase-1/$FIXTURE.md"
-      rm -f "$WORK_DIR/docs/roadmap/phase-1/$FIXTURE.md.bak"
-    fi
-    cat > "$PROMPT_FILE" <<EOF
-Use the \`/devlyn:resolve --spec docs/roadmap/phase-1/$FIXTURE.md ${ENGINE_CLAUSE}\` skill to implement the spec. ${ENGINE_PROMPT_HINT}
-
-The 2-skill design folds verification into resolve's VERIFY phase — there is no separate \`/devlyn:preflight\`, \`/devlyn:auto-resolve\`, or other 3-skill orchestrator at HEAD.
-
-After the pipeline finishes, report the terminal verdict and list of files changed so the benchmark runner can capture state.
-EOF
-  fi
-else
-  # Bare — same prompt for F9 as any other fixture: task.txt with anti-skill rules.
-  cat > "$PROMPT_FILE" <<EOF
-You are acting as a smart engineer implementing the following request directly. No skill pipeline.
-
-HARD RULES:
-- Do NOT invoke any \`/devlyn:*\` skill (no auto-resolve, evaluate, review, clean, update-docs, team-*, etc.).
-- Do NOT invoke native \`simplify\` or \`security-review\` skills.
-- Use only direct tools: Read, Write, Edit, Grep, Glob, Bash.
-- Write code to satisfy the request. Run the verification commands the user implies. Fix failures until they pass.
-
-REQUEST:
-$(cat "$TASK")
-EOF
-fi
-
-# Commit scaffolding so the upcoming arm-only diff excludes it. A failure
-# here means arm work would appear mixed with scaffolding in the diff — fail
-# loudly rather than silently producing corrupted data.
-if ! (cd "$WORK_DIR" \
-        && git add -A \
-        && git -c user.email=b@b -c user.name=b commit -q --allow-empty -m "bench-scaffold"); then
-  echo "bench-scaffold commit failed — arm diff isolation broken"
-  exit 1
-fi
-# Capture the scaffold commit SHA so the arm-only diff can be computed even
-# when the arm makes its own commits internally (e.g. variant's auto-resolve
-# pipeline commits after each phase). Diffing against HEAD would miss those.
-SCAFFOLD_SHA=$(cd "$WORK_DIR" && git rev-parse HEAD)
-
-# Timing start
-T_START=$(date +%s)
-cat > "$RESULT_DIR/timing.json" <<EOF
-{
-  "run_id": "$RUN_ID",
-  "fixture": "$FIXTURE",
-  "arm": "$ARM",
-  "work_dir": "$WORK_DIR",
-  "start_epoch": $T_START
-}
-EOF
-
-# --- Invocation -------------------------------------------------------------
-# Exit code is captured so infrastructure failures don't silently look like
-# a weak diff. See invoke_exit in result.json.
-INVOKE_EXIT=0
-# iter-0012: WATCHDOG_FIRED is the truth source for `timed_out` in result.json.
-# Set to 1 only when the watchdog flag file existed at post-wait check
-# (lines 332-336). Initialized here so the `set -u` `export` below at the
-# Python aggregator works in both branches (dry-run never sets it).
-WATCHDOG_FIRED=0
-if [ $DRY_RUN -eq 1 ]; then
-  echo "[run-fixture] DRY RUN — prepared $WORK_DIR, skipping model invocation" \
-    > "$RESULT_DIR/transcript.txt"
-else
-  command -v claude >/dev/null 2>&1 || {
-    echo "claude CLI not on PATH — cannot invoke arm"; exit 1;
-  }
-  # Arm uses real HOME so Claude auth (macOS Keychain + ~/.claude session
-  # state) works. Fixtures that need HOME isolation override it inline in
-  # their verification commands (e.g. F2 uses `HOME=/nonexistent` per command).
-  # Variant-arm skills are resolved from $WORK_DIR/.claude/skills (project
-  # scope), so bare-arm runs never see them regardless of HOME.
-  #
-  # Portable wall-clock watchdog. macOS lacks GNU `timeout` by default; the
-  # earlier fallback ran arms unbounded, which produced a multi-hour F7 hang
-  # when the inner `codex exec` raced against a lingering codex-mcp-server.
-  # We background the arm in its own process group (`set -m` + `exec`) so the
-  # watchdog can `kill -- -PGID` and reap codex/codex-mcp-server descendants
-  # together with the parent. A flag file disambiguates timeout from natural
-  # exit; on timeout we set INVOKE_EXIT=124 (GNU timeout convention) so the
-  # downstream `invoke_failure` logic routes the run into BLOCKED. iter-0012:
-  # the same flag also flips WATCHDOG_FIRED=1, which is exported and consumed
-  # by the Python aggregator below to derive result.json.timed_out — so a
-  # natural exit at or past the budget is no longer mislabeled as timeout.
-  #
-  # MCP/config isolation (iter 0004). The harness's `claude -p` subprocess
-  # must not load the operator's user-level MCP/plugins/settings (pencil,
-  # codex-cli, telegram, vercel, ...). Project policy is "MCP/plugins are not in
-  # the loop"; loading user config inside the arm is uncontrolled environment
-  # leaking into the experiment. `--setting-sources project,local` keeps user
-  # plugin enablement out of the run but Claude Code still reads the installed
-  # plugin registry for autoupdate. Official Claude Code settings document
-  # `DISABLE_AUTOUPDATER=1` / `CLAUDE_CODE_DISABLE_NONESSENTIAL_TRAFFIC=1` as the
-  # supported way to disable that background traffic, while preserving OAuth
-  # auth from the real HOME. `--strict-mcp-config` + an empty `mcpServers` object
-  # forces a hermetic MCP set. Skills still resolve via the project
-  # `.claude/skills` staged into the worktree.
-  # `--debug-file` records per-arm init/runtime so the next hang has a
-  # location, not a guess.
-  TIMEOUT_FLAG="$RESULT_DIR/.timed_out"
-  rm -f "$TIMEOUT_FLAG"
-
-  set +e
-  set -m
-  (
-    cd "$WORK_DIR"
-    # iter-0009 + iter-0019: prepend codex shim PATH for any arm that staged
-    # one. variant routes through codex-monitored.sh; solo_claude refuses on
-    # CODEX_BLOCKED=1; bare has no shim.
-    # iter-0033c/0037 (Codex R0-infra Q6 + risk probes): l2_* arms ALSO need the shim
-    # PATH — they route Claude IMPLEMENT but Codex pair-JUDGE in VERIFY hits
-    # `codex exec` through the wrapper for starvation safety.
-    if { [ "$ARM" = "variant" ] || [ "$ARM" = "solo_claude" ] \
-         || [ "$ARM" = "l2_gated" ] || [ "$ARM" = "l2_risk_probes" ] || [ "$ARM" = "l2_forced" ]; } \
-       && [ -x "$WORK_DIR/.devlyn-bin/codex" ]; then
-      export PATH="$WORK_DIR/.devlyn-bin:$PATH"
-      [ "$ARM" = "solo_claude" ] && export CODEX_BLOCKED=1
-    fi
-    # iter-0019.6: BUILD_GATE's spec-verify-check.py uses BENCH_WORKDIR for
-    # commands that escape the work-dir (e.g. F9's outside-repo check via
-    # `cd /tmp && node $BENCH_WORKDIR/bin/cli.js gitstats`). Mirror exactly
-    # what the post-run verifier (run-fixture.sh:431-434) sets so the gate
-    # sees the same environment shape.
-    export BENCH_WORKDIR="$WORK_DIR"
-    # Python helper scripts run inside the benchmark worktree. Do not let them
-    # rewrite tracked __pycache__ artifacts and pollute the arm-only diff.
-    export PYTHONDONTWRITEBYTECODE=1
-    # Official Claude Code setting: disable background plugin/autoupdate traffic
-    # before process startup. Project settings env is not early enough for all
-    # startup paths.
-    export CLAUDE_CODE_DISABLE_NONESSENTIAL_TRAFFIC=1
-    export DISABLE_AUTOUPDATER=1
-    exec claude \
-      -p "$(cat "$PROMPT_FILE")" \
-      --dangerously-skip-permissions \
-      --effort xhigh \
-      --setting-sources project,local \
-      --strict-mcp-config \
-      --mcp-config '{"mcpServers":{}}' \
-      --debug-file "$RESULT_DIR/claude-debug.log"
-  ) > "$RESULT_DIR/transcript.txt" 2>&1 &
-  CHILD_PID=$!
-  set +m
-
-  (
-    deadline=$((T_START + TIMEOUT))
-    while kill -0 "$CHILD_PID" 2>/dev/null; do
-      now=$(date +%s)
-      if [ "$now" -ge "$deadline" ]; then
-        : > "$TIMEOUT_FLAG"
-        kill -TERM -- "-$CHILD_PID" 2>/dev/null
-        kill_worktree_processes "$WORK_DIR" TERM
-        sleep 5
-        kill -KILL -- "-$CHILD_PID" 2>/dev/null
-        kill_worktree_processes "$WORK_DIR" KILL
-        exit 0
-      fi
-      remaining=$((deadline - now))
-      [ "$remaining" -gt 30 ] && sleep 30 || sleep "$remaining"
-    done
-  ) &
-  WATCHDOG_PID=$!
-
-  wait "$CHILD_PID"
-  INVOKE_EXIT=$?
-
-  kill -TERM "$WATCHDOG_PID" 2>/dev/null || true
-  wait "$WATCHDOG_PID" 2>/dev/null || true
-
-  if [ -f "$TIMEOUT_FLAG" ]; then
-    INVOKE_EXIT=124
-    WATCHDOG_FIRED=1
-    rm -f "$TIMEOUT_FLAG"
-    kill_worktree_processes "$WORK_DIR" TERM
-    sleep 1
-    kill_worktree_processes "$WORK_DIR" KILL
-    echo "[run-fixture] arm timed out after ${TIMEOUT}s — INVOKE_EXIT=124" >&2
-  else
-    # A clean `claude -p` exit can still leave OTHER-engine pair-JUDGE
-    # descendants alive; reap any process group rooted in this arm worktree.
-    kill_worktree_processes "$WORK_DIR" TERM
-    sleep 1
-    kill_worktree_processes "$WORK_DIR" KILL
-  fi
-  set -e
-fi
-
-T_END=$(date +%s)
-ELAPSED=$((T_END - T_START))
-
-# Restore tracked Python bytecode to the scaffold commit and remove only
-# untracked bytecode. Helper invocations must not count as model work, but
-# deleting tracked scaffold files would also pollute changed-files.txt.
-(cd "$WORK_DIR" \
-  && git restore --source "$SCAFFOLD_SHA" -- .claude/skills/_shared/__pycache__ 2>/dev/null || true)
-cleanup_roots=()
-[ -d "$WORK_DIR/.claude" ] && cleanup_roots+=("$WORK_DIR/.claude")
-[ -d "$WORK_DIR/.devlyn" ] && cleanup_roots+=("$WORK_DIR/.devlyn")
-if [ ${#cleanup_roots[@]} -gt 0 ]; then
-  find "${cleanup_roots[@]}" -type f \( -name '*.pyc' -o -name '*.pyo' \) -print0 \
-    | while IFS= read -r -d '' py_file; do
-        rel="${py_file#$WORK_DIR/}"
-        if ! (cd "$WORK_DIR" && git ls-files --error-unmatch "$rel" >/dev/null 2>&1); then
-          rm -f "$py_file"
-        fi
-      done
-  find "${cleanup_roots[@]}" -type d -name __pycache__ -empty -delete || true
-fi
-
-# Capture the ARM-ONLY diff against the scaffold commit. Variant's
-# auto-resolve pipeline commits internally after each phase, so diffing
-# against HEAD would miss committed work. Diffing against SCAFFOLD_SHA after
-# `git add -A` picks up both scaffold..HEAD committed deltas AND any
-# staged-but-not-yet-committed leftovers (unstaged or untracked).
-(cd "$WORK_DIR" \
-   && git add -A 2>/dev/null \
-   && git diff "$SCAFFOLD_SHA") > "$RESULT_DIR/diff.patch" 2>&1 || true
-(cd "$WORK_DIR" \
-   && git diff "$SCAFFOLD_SHA" --name-only) > "$RESULT_DIR/changed-files.txt" 2>&1 || true
-
-# Deterministic oracles. Hard/flag findings are merged into verify.json below.
-python3 "$BENCH_ROOT/scripts/oracle-test-fidelity.py" \
-  --work "$WORK_DIR" --scaffold "$SCAFFOLD_SHA" \
-  > "$RESULT_DIR/oracle-test-fidelity.json" 2>/dev/null || \
-  echo '{"oracle":"test-fidelity","findings":[],"error":"oracle invocation failed"}' \
-    > "$RESULT_DIR/oracle-test-fidelity.json"
-
-python3 "$BENCH_ROOT/scripts/oracle-scope-tier-a.py" \
-  --work "$WORK_DIR" --scaffold "$SCAFFOLD_SHA" --expected "$EXPECTED" \
-  > "$RESULT_DIR/oracle-scope-tier-a.json" 2>/dev/null || \
-  echo '{"oracle":"scope-tier-a","findings":[],"error":"oracle invocation failed"}' \
-    > "$RESULT_DIR/oracle-scope-tier-a.json"
-
-python3 "$BENCH_ROOT/scripts/oracle-scope-tier-b.py" \
-  --work "$WORK_DIR" --scaffold "$SCAFFOLD_SHA" --expected "$EXPECTED" \
-  > "$RESULT_DIR/oracle-scope-tier-b.json" 2>/dev/null || \
-  echo '{"oracle":"scope-tier-b","findings":[],"error":"oracle invocation failed"}' \
-    > "$RESULT_DIR/oracle-scope-tier-b.json"
-
-if { [ "$ARM" = "variant" ] || [ "$ARM" = "solo_claude" ] \
-     || [ "$ARM" = "l2_gated" ] || [ "$ARM" = "l2_risk_probes" ]; } \
-   && [ -f "$WORK_DIR/.devlyn/pipeline.state.json" ] \
-   && [ -f "$WORK_DIR/.claude/skills/_shared/verify-merge-findings.py" ]; then
-  if [ -f "$WORK_DIR/.devlyn/codex-judge.stdout" ] \
-     && [ -f "$WORK_DIR/.claude/skills/_shared/collect-codex-findings.py" ]; then
-    if ! python3 "$WORK_DIR/.claude/skills/_shared/collect-codex-findings.py" \
-        --devlyn-dir "$WORK_DIR/.devlyn" \
-        > "$RESULT_DIR/collect-codex-findings.log" 2>&1; then
-      echo "[run-fixture] Codex pair findings collection failed; see $RESULT_DIR/collect-codex-findings.log" >&2
-    fi
-  fi
-  if ! python3 "$WORK_DIR/.claude/skills/_shared/verify-merge-findings.py" \
-      --devlyn-dir "$WORK_DIR/.devlyn" --write-state \
-      > "$RESULT_DIR/verify-merge-normalize.log" 2>&1; then
-    echo "[run-fixture] verify merge normalization failed; see $RESULT_DIR/verify-merge-normalize.log" >&2
-  fi
-fi
-
-if { [ "$ARM" = "variant" ] || [ "$ARM" = "solo_claude" ] \
-     || [ "$ARM" = "l2_gated" ] || [ "$ARM" = "l2_risk_probes" ]; } && [ -d "$WORK_DIR/.devlyn" ]; then
-  run_dir=$(find "$WORK_DIR/.devlyn/runs" -mindepth 1 -maxdepth 1 -type d 2>/dev/null | sort | tail -1 || true)
-  if [ -n "$run_dir" ]; then
-    rm -rf "$RESULT_DIR/run-archive"
-    cp -R "$run_dir" "$RESULT_DIR/run-archive"
-    [ -f "$RESULT_DIR/run-archive/pipeline.state.json" ] \
-      || [ ! -f "$WORK_DIR/.devlyn/pipeline.state.json" ] \
-      || cp "$WORK_DIR/.devlyn/pipeline.state.json" "$RESULT_DIR/run-archive/pipeline.state.json"
-  else
-    rm -rf "$RESULT_DIR/run-archive"
-    mkdir -p "$RESULT_DIR/run-archive"
-    find "$WORK_DIR/.devlyn" -maxdepth 1 -type f -exec cp {} "$RESULT_DIR/run-archive/" \;
-  fi
-fi
-
-# Run verification commands + forbidden pattern scan + deps check. Uses
-# the operator's real HOME (same as the arm saw). Fixtures that need HOME
-# isolation override it inline per verification command.
-python3 - "$EXPECTED" "$RESULT_DIR" "$WORK_DIR" "$BENCH_ROOT/scripts" <<'PY'
-import json, os, pathlib, re, subprocess, sys
-
-sys.path.insert(0, sys.argv[4])
-from pair_evidence_contract import loads_strict_json_object
-
-expected = loads_strict_json_object(pathlib.Path(sys.argv[1]).read_text())
-result_dir = sys.argv[2]
-work = sys.argv[3]
-
-verify_env = os.environ.copy()
-# Expose the work-dir path so fixtures whose verification needs to reference
-# the work root can do so portably (e.g. F9's out-of-repo check).
-verify_env["BENCH_WORKDIR"] = work
-# Hidden benchmark verifiers live in the fixture directory, outside the arm's
-# work tree. This keeps oracle code from becoming implementation context.
-verify_env["BENCH_FIXTURE_DIR"] = os.path.dirname(os.path.abspath(sys.argv[1]))
-
-verify = {"commands": [], "forbidden_pattern_hits": [], "deps_added": 0,
-          "max_deps_added": expected.get("max_deps_added", 0),
-          "missing_required_files": [], "forbidden_files_present": [],
-          "oracle_findings": [], "oracle_disqualifier": False}
-
-for vc in expected.get("verification_commands", []):
-    try:
-        timeout_sec = vc.get("timeout_sec", 60)
-        if (
-            isinstance(timeout_sec, bool)
-            or not isinstance(timeout_sec, int)
-            or not 1 <= timeout_sec <= 600
-        ):
-            raise ValueError(
-                "timeout_sec must be an integer from 1 to 600 (bool is not allowed)"
-            )
-        proc = subprocess.run(vc["cmd"], cwd=work, shell=True, env=verify_env,
-                              capture_output=True, text=True,
-                              timeout=timeout_sec)
-        out = (proc.stdout or "") + (proc.stderr or "")
-        ok_exit = proc.returncode == vc.get("exit_code", 0)
-        ok_contains = all(s in out for s in vc.get("stdout_contains", []))
-        ok_not = not any(s in out for s in vc.get("stdout_not_contains", []))
-        verify["commands"].append({
-            "cmd": vc["cmd"],
-            "expected_exit": vc.get("exit_code", 0),
-            "actual_exit": proc.returncode,
-            "pass": bool(ok_exit and ok_contains and ok_not),
-            "reason": None if (ok_exit and ok_contains and ok_not)
-                      else ("exit" if not ok_exit
-                            else ("missing_contains" if not ok_contains else "unexpected_text")),
-            "stdout_tail": out[-500:],
-        })
-    except subprocess.TimeoutExpired:
-        verify["commands"].append({"cmd": vc["cmd"], "pass": False, "reason": "timeout"})
-    except Exception as e:
-        verify["commands"].append({"cmd": vc["cmd"], "pass": False,
-                                    "reason": f"error:{e.__class__.__name__}:{e}"})
-
-# Forbidden pattern scan over diff.patch. Each pattern may declare a `files`
-# allowlist; when present, we slice the diff to only those files' hunks.
-diff_text = ""
-try:
-    with open(os.path.join(result_dir, "diff.patch")) as fh:
-        diff_text = fh.read()
-except Exception:
-    pass
-
-def slice_diff_to_files(diff, files):
-    """Return the subset of a unified diff touching any of `files`.
-    Hunks outside the allowlist are dropped."""
-    if not files:
-        return diff
-    out, keep = [], False
-    for line in diff.splitlines(keepends=True):
-        if line.startswith("diff --git "):
-            keep = any(f in line for f in files)
-        if keep:
-            out.append(line)
-    return "".join(out)
-
-for fp in expected.get("forbidden_patterns", []):
-    scope = slice_diff_to_files(diff_text, fp.get("files") or [])
-    if re.search(fp["pattern"], scope):
-        verify["forbidden_pattern_hits"].append({
-            "pattern": fp["pattern"],
-            "severity": fp.get("severity", "warning"),
-            "description": fp.get("description", ""),
-            "scoped_to": fp.get("files") or "all",
-        })
-
-# Deps added count (naive: count top-level added lines under dependencies keys)
-try:
-    proc = subprocess.run(["git", "diff", "HEAD", "--", "package.json"],
-                          cwd=work, capture_output=True, text=True)
-    in_deps = False
-    for line in (proc.stdout or "").splitlines():
-        if line.startswith("+ ") or line.startswith("- "):
-            continue
-        if '"dependencies"' in line or '"devDependencies"' in line:
-            in_deps = True
-        elif line.strip().startswith("}"):
-            in_deps = False
-        elif in_deps and line.startswith("+") and not line.startswith("+++"):
-            if re.search(r'"[^"]+"\s*:\s*"[^"]+"', line):
-                verify["deps_added"] += 1
-except Exception:
-    pass
-
-# Required / forbidden files
-try:
-    with open(os.path.join(result_dir, "changed-files.txt")) as fh:
-        changed = [l.strip() for l in fh.read().splitlines() if l.strip()]
-except Exception:
-    changed = []
-verify["missing_required_files"] = [
-    f for f in expected.get("required_files", [])
-    if not os.path.exists(os.path.join(work, f))
-]
-verify["forbidden_files_present"] = [
-    f for f in expected.get("forbidden_files", []) if f in changed
-]
-
-total = len(verify["commands"])
-passed = sum(1 for r in verify["commands"] if r.get("pass"))
-verify["commands_passed"] = passed
-verify["commands_total"] = total
-verify["verify_score"] = (passed / total) if total else 1.0
-
-for oracle_file in (
-    "oracle-scope-tier-a.json",
-    "oracle-scope-tier-b.json",
-    "oracle-test-fidelity.json",
-):
-    oracle_path = os.path.join(result_dir, oracle_file)
-    try:
-        raw_oracle = loads_strict_json_object(pathlib.Path(oracle_path).read_text())
-    except (OSError, ValueError) as exc:
-        oracle_name = oracle_file.removesuffix(".json")
-        verify["oracle_findings"].append({
-            "oracle": oracle_name,
-            "type": "oracle-error",
-            "severity": "hard",
-            "verdict": "Deterministic oracle failed or emitted an invalid artifact",
-            "error": f"oracle artifact malformed or unreadable: {exc}",
-        })
-        verify["oracle_disqualifier"] = True
-        continue
-    data = raw_oracle
-    oracle_name = data.get("oracle") or oracle_file.removesuffix(".json")
-    if not isinstance(oracle_name, str) or not oracle_name:
-        oracle_name = oracle_file.removesuffix(".json")
-    oracle_error = data.get("error")
-    if isinstance(oracle_error, str) and oracle_error:
-        verify["oracle_findings"].append({
-            "oracle": oracle_name,
-            "type": "oracle-error",
-            "severity": "hard",
-            "verdict": "Deterministic oracle failed or emitted an invalid artifact",
-            "error": oracle_error,
-        })
-        verify["oracle_disqualifier"] = True
-    raw_findings = data.get("findings")
-    findings = raw_findings if isinstance(raw_findings, list) else []
-    for finding in findings:
-        if not isinstance(finding, dict):
-            continue
-        item = dict(finding)
-        item["oracle"] = oracle_name
-        verify["oracle_findings"].append(item)
-        if item.get("severity") in ("disqualifier", "hard", "flag"):
-            verify["oracle_disqualifier"] = True
-
-verify["disqualifier"] = (
-    any(h["severity"] == "disqualifier" for h in verify["forbidden_pattern_hits"])
-    or verify["deps_added"] > verify["max_deps_added"]
-    or bool(verify["missing_required_files"])
-    or bool(verify["forbidden_files_present"])
-    or verify["oracle_disqualifier"]
-)
-
-json.dump(verify, open(os.path.join(result_dir, "verify.json"), "w"), indent=2)
-PY
-
-# Timing + aggregate
-export INVOKE_EXIT WATCHDOG_FIRED
-python3 - "$RESULT_DIR" "$FIXTURE" "$ARM" "$RUN_ID" "$T_END" "$ELAPSED" "$TIMEOUT" "$BENCH_ROOT/scripts" <<'PY'
-import json, os, pathlib, sys
-result_dir, fixture, arm, run_id = sys.argv[1:5]
-t_end, elapsed, timeout = int(sys.argv[5]), int(sys.argv[6]), int(sys.argv[7])
-
-sys.path.insert(0, sys.argv[8])
-from pair_evidence_contract import loads_strict_json_object
-
-timing = loads_strict_json_object(pathlib.Path(result_dir, "timing.json").read_text())
-timing["end_epoch"] = t_end
-timing["elapsed_seconds"] = elapsed
-timing["timeout_seconds"] = timeout
-# iter-0012: derive from watchdog signal, not elapsed wall time. Natural
-# exits at-or-past the budget (budget == elapsed, or up to ~5s past due to
-# SIGTERM grace) are no longer mislabeled as timeouts. Source of truth is
-# WATCHDOG_FIRED, set in run-fixture.sh when TIMEOUT_FLAG existed post-wait.
-timing["timed_out"] = os.environ.get("WATCHDOG_FIRED", "0") == "1"
-json.dump(timing, open(os.path.join(result_dir, "timing.json"), "w"), indent=2)
-
-def as_dict(value):
-    return value if isinstance(value, dict) else {}
-
-verify = as_dict(loads_strict_json_object(pathlib.Path(result_dir, "verify.json").read_text()))
-try:
-    with open(os.path.join(result_dir, "diff.patch")) as f: diff_size = len(f.read())
-except Exception: diff_size = 0
-try:
-    with open(os.path.join(result_dir, "changed-files.txt")) as f:
-        changed = [l for l in f.read().splitlines() if l.strip()]
-except Exception:
-    changed = []
-
-state = {}
-state_path = os.path.join(result_dir, "run-archive", "pipeline.state.json")
-if os.path.isfile(state_path):
-    state = as_dict(loads_strict_json_object(pathlib.Path(state_path).read_text()))
-phases = as_dict(state.get("phases"))
-verify_phase = as_dict(phases.get("verify"))
-legacy_verify = as_dict(state.get("verify"))
-sub_verdicts = verify_phase.get("sub_verdicts")
-pair_trigger = verify_phase.get("pair_trigger") or legacy_verify.get("pair_trigger")
-PAIR_VERDICTS = {"PASS", "PASS_WITH_ISSUES", "NEEDS_WORK", "BLOCKED", "FAIL"}
-
-def has_pair_judge_verdict(sub_verdicts):
-    return isinstance(sub_verdicts, dict) and (
-        sub_verdicts.get("judge_codex") in PAIR_VERDICTS
-        or sub_verdicts.get("pair_judge") in PAIR_VERDICTS
-    )
-
-pair_mode = has_pair_judge_verdict(sub_verdicts) or verify_phase.get("pair_mode") is True
-
-invoke_exit = int(os.environ.get("INVOKE_EXIT", "0"))
-plugin_contamination = False
-plugin_contamination_reason = None
-debug_path = os.path.join(result_dir, "claude-debug.log")
-try:
-    with open(debug_path, errors="replace") as f:
-        debug_text = f.read()
-except OSError:
-    debug_text = ""
-if (
-    "Plugin autoupdate: checking installed plugins" in debug_text
-    or "Caching plugin from source:" in debug_text
-    or "Cloned repository from " in debug_text
-    or "Successfully cached plugin " in debug_text
-    or "Found 8 plugins (8 enabled" in debug_text
-):
-    if "Plugin autoupdate: skipped (auto-updater disabled)" not in debug_text:
-        plugin_contamination = True
-        plugin_contamination_reason = "plugin_contamination"
-
-invoke_failure = (
-    (invoke_exit not in (0,) and not timing["timed_out"])
-    or plugin_contamination
-)
-invoke_failure_reason = None
-if plugin_contamination:
-    invoke_failure_reason = plugin_contamination_reason
-elif invoke_failure:
-    transcript_path = os.path.join(result_dir, "transcript.txt")
-    haystack = ""
-    for path in (transcript_path, debug_path):
-        try:
-            with open(path, errors="replace") as f:
-                haystack += "\n" + f.read()
-        except OSError:
-            pass
-    if "You've hit your limit" in haystack or "rate_limit_error" in haystack:
-        invoke_failure_reason = "provider_limit"
-
-result = {
-    "fixture": fixture,
-    "arm": arm,
-    "run_id": run_id,
-    "disqualifier": verify.get("disqualifier", False),
-    "oracle_disqualifier": verify.get("oracle_disqualifier", False),
-    "oracle_findings_count": len(verify.get("oracle_findings", [])),
-    "verify_score": verify.get("verify_score", 0.0),
-    "commands_passed": verify.get("commands_passed", 0),
-    "commands_total": verify.get("commands_total", 0),
-    "diff_bytes": diff_size,
-    "files_changed": len(changed),
-    "elapsed_seconds": elapsed,
-    "timed_out": timing["timed_out"],
-    "environment_contamination": plugin_contamination,
-    "environment_contamination_reason": plugin_contamination_reason,
-    "invoke_exit": invoke_exit,
-    "invoke_failure": invoke_failure,
-    "invoke_failure_reason": invoke_failure_reason,
-    "terminal_verdict": as_dict(phases.get("final_report")).get("verdict"),
-    "verify_verdict": verify_phase.get("verdict"),
-    "pair_trigger": pair_trigger,
-    "pair_mode": pair_mode,
-}
-json.dump(result, open(os.path.join(result_dir, "result.json"), "w"), indent=2)
-print(json.dumps(result, indent=2))
-PY
-
-echo "[run-fixture] done: $RESULT_DIR"