dcmjs 0.29.2 → 0.29.3
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/build/dcmjs.es.js +38 -38
- package/build/dcmjs.es.js.map +1 -1
- package/build/dcmjs.js +38 -38
- package/build/dcmjs.js.map +1 -1
- package/package.json +1 -1
package/build/dcmjs.es.js
CHANGED
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@@ -20230,28 +20230,28 @@ function fillSegmentation(segmentation, inputLabelmaps3D) {
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20230
20230
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metadata = labelmap3D.metadata;
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20231
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var referencedFramesPerSegment = [];
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20232
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20233
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-
for (var
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20234
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-
if (metadata[
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20235
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-
referencedFramesPerSegment[
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20233
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+
for (var i = 1; i < metadata.length; i++) {
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20234
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+
if (metadata[i]) {
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20235
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+
referencedFramesPerSegment[i] = [];
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}
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20237
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}
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20238
20238
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20239
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-
var _loop2 = function _loop2(
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20240
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-
var labelmap2D = labelmaps2D[
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20239
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+
var _loop2 = function _loop2(_i) {
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20240
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+
var labelmap2D = labelmaps2D[_i];
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20241
20241
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20242
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-
if (labelmaps2D[
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20242
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+
if (labelmaps2D[_i]) {
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var segmentsOnLabelmap = labelmap2D.segmentsOnLabelmap;
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segmentsOnLabelmap.forEach(function (segmentIndex) {
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if (segmentIndex !== 0) {
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20246
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-
referencedFramesPerSegment[segmentIndex].push(
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20246
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+
referencedFramesPerSegment[segmentIndex].push(_i);
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numberOfFrames++;
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}
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});
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}
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};
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20253
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-
for (var
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20254
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-
_loop2(
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20253
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+
for (var _i = 0; _i < labelmaps2D.length; _i++) {
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20254
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+
_loop2(_i);
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}
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referencedFramesPerLabelmap[labelmapIndex] = referencedFramesPerSegment;
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@@ -20317,8 +20317,8 @@ function _getLabelmapsFromRefernecedFrameIndicies(labelmap3D, referencedFrameInd
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var labelmaps2D = labelmap3D.labelmaps2D;
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var labelmaps = [];
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for (var
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20321
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-
var frame = referencedFrameIndicies[
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+
for (var i = 0; i < referencedFrameIndicies.length; i++) {
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20321
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var frame = referencedFrameIndicies[i];
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labelmaps.push(labelmaps2D[frame].pixelData);
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}
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@@ -20344,8 +20344,8 @@ function _createSegFromImages$1(images, isMultiframe, options) {
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dataset._meta = DicomMetaDictionary.namifyDataset(dicomData.meta);
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datasets.push(dataset);
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} else {
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20347
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-
for (var
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20348
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var _image = images[
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for (var i = 0; i < images.length; i++) {
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20348
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var _image = images[i];
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var _arrayBuffer = _image.data.byteArray.buffer;
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var _dicomData = DicomMessage.readFile(_arrayBuffer);
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@@ -20581,7 +20581,7 @@ function checkSEGsOverlapping(pixelData, multiframe, imageIds, validOrientations
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var imageId = findReferenceSourceImageId(multiframe, frameSegment, imageIds, metadataProvider, tolerance);
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if (!imageId) {
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20584
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-
console.warn("Image not present in stack, can't import frame : " +
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20584
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console.warn("Image not present in stack, can't import frame : " + frameSegment + ".");
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return "continue";
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}
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@@ -20618,8 +20618,8 @@ function checkSEGsOverlapping(pixelData, multiframe, imageIds, validOrientations
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var temp2DArray = new Uint16Array(sliceLength).fill(0);
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20621
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-
for (var
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20622
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var _frameSegment = role[
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20621
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for (var i = 0; i < role.length; ++i) {
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20622
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var _frameSegment = role[i];
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var PerFrameFunctionalGroups = PerFrameFunctionalGroupsSequence[_frameSegment];
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var ImageOrientationPatientI = sharedImageOrientationPatient || PerFrameFunctionalGroups.PlaneOrientationSequence.ImageOrientationPatient;
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var pixelDataI2D = ndarray(new Uint8Array(pixelData.buffer, _frameSegment * sliceLength, sliceLength), [Rows, Columns]);
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@@ -20679,32 +20679,32 @@ function insertOverlappingPixelDataPlanar(segmentsOnFrame, segmentsOnFrameArray,
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var numberOfSegs = multiframe.SegmentSequence.length;
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for (var segmentIndexToProcess = 1; segmentIndexToProcess <= numberOfSegs; ++segmentIndexToProcess) {
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20682
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-
var _loop4 = function _loop4(
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20683
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-
var PerFrameFunctionalGroups = PerFrameFunctionalGroupsSequence[
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20684
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-
var segmentIndex = getSegmentIndex(multiframe,
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20682
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+
var _loop4 = function _loop4(_i2, groupsLen) {
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20683
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var PerFrameFunctionalGroups = PerFrameFunctionalGroupsSequence[_i2];
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20684
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var segmentIndex = getSegmentIndex(multiframe, _i2);
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if (segmentIndex === undefined) {
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throw new Error("Could not retrieve the segment index. Aborting segmentation loading.");
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}
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20690
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if (segmentIndex !== segmentIndexToProcess) {
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20691
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-
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20691
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+
i = _i2;
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return "continue";
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}
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var ImageOrientationPatientI = sharedImageOrientationPatient || PerFrameFunctionalGroups.PlaneOrientationSequence.ImageOrientationPatient;
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20696
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-
var pixelDataI2D = ndarray(new Uint8Array(pixelData.buffer,
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20696
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+
var pixelDataI2D = ndarray(new Uint8Array(pixelData.buffer, _i2 * sliceLength, sliceLength), [Rows, Columns]);
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var alignedPixelDataI = alignPixelDataWithSourceData$1(pixelDataI2D, ImageOrientationPatientI, validOrientations, tolerance);
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if (!alignedPixelDataI) {
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throw new Error("Individual SEG frames are out of plane with respect to the first SEG frame. " + "This is not yet supported. Aborting segmentation loading.");
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}
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20702
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-
var imageId = findReferenceSourceImageId(multiframe,
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+
var imageId = findReferenceSourceImageId(multiframe, _i2, imageIds, metadataProvider, tolerance);
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20704
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if (!imageId) {
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20706
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console.warn("Image not present in stack, can't import frame : " +
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-
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20706
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console.warn("Image not present in stack, can't import frame : " + _i2 + ".");
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i = _i2;
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return "continue";
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}
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@@ -20736,7 +20736,7 @@ function insertOverlappingPixelDataPlanar(segmentsOnFrame, segmentsOnFrameArray,
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tempBuffer = labelmapBufferArray[m].slice(0);
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tempSegmentsOnFrame = lodash_clonedeep(segmentsOnFrameArray[m]);
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20739
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-
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+
_i2 = 0;
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break;
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} else {
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labelmap2DView[j] = segmentIndex;
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@@ -20759,11 +20759,11 @@ function insertOverlappingPixelDataPlanar(segmentsOnFrame, segmentsOnFrameArray,
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segmentsOnFrame[imageIdIndex].push(segmentIndex);
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}
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-
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i = _i2;
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};
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-
for (var
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-
var _ret2 = _loop4(
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for (var i = 0, groupsLen = PerFrameFunctionalGroupsSequence.length; i < groupsLen; ++i) {
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var _ret2 = _loop4(i, groupsLen);
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if (_ret2 === "continue") continue;
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}
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@@ -20792,26 +20792,26 @@ function insertPixelDataPlanar(segmentsOnFrame, segmentsOnFrameArray, labelmapBu
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var sharedImageOrientationPatient = SharedFunctionalGroupsSequence.PlaneOrientationSequence ? SharedFunctionalGroupsSequence.PlaneOrientationSequence.ImageOrientationPatient : undefined;
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var sliceLength = Columns * Rows;
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var _loop5 = function _loop5(groupsLen,
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-
var PerFrameFunctionalGroups = PerFrameFunctionalGroupsSequence[
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20795
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+
var _loop5 = function _loop5(groupsLen, _i3) {
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20796
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var PerFrameFunctionalGroups = PerFrameFunctionalGroupsSequence[_i3];
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20797
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var ImageOrientationPatientI = sharedImageOrientationPatient || PerFrameFunctionalGroups.PlaneOrientationSequence.ImageOrientationPatient;
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20798
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-
var pixelDataI2D = ndarray(new Uint8Array(pixelData.buffer,
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var pixelDataI2D = ndarray(new Uint8Array(pixelData.buffer, _i3 * sliceLength, sliceLength), [Rows, Columns]);
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var alignedPixelDataI = alignPixelDataWithSourceData$1(pixelDataI2D, ImageOrientationPatientI, validOrientations, tolerance);
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if (!alignedPixelDataI) {
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throw new Error("Individual SEG frames are out of plane with respect to the first SEG frame. " + "This is not yet supported. Aborting segmentation loading.");
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20803
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}
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20804
20804
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20805
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-
var segmentIndex = getSegmentIndex(multiframe,
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20805
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+
var segmentIndex = getSegmentIndex(multiframe, _i3);
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20806
20806
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20807
20807
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if (segmentIndex === undefined) {
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20808
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throw new Error("Could not retrieve the segment index. Aborting segmentation loading.");
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20809
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}
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20810
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20811
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-
var imageId = findReferenceSourceImageId(multiframe,
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20811
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+
var imageId = findReferenceSourceImageId(multiframe, _i3, imageIds, metadataProvider, tolerance);
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20813
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if (!imageId) {
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20814
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-
console.warn("Image not present in stack, can't import frame : " +
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20814
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+
console.warn("Image not present in stack, can't import frame : " + _i3 + ".");
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20815
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return "continue";
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20816
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}
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20817
20817
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@@ -20847,8 +20847,8 @@ function insertPixelDataPlanar(segmentsOnFrame, segmentsOnFrameArray, labelmapBu
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20847
20847
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}
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20848
20848
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};
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20849
20849
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20850
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-
for (var
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20851
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-
var _ret3 = _loop5(groupsLen,
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20850
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+
for (var _i3 = 0, groupsLen = PerFrameFunctionalGroupsSequence.length; _i3 < groupsLen; ++_i3) {
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20851
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+
var _ret3 = _loop5(groupsLen, _i3);
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20852
20852
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20853
20853
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if (_ret3 === "continue") continue;
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20854
20854
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}
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@@ -21113,8 +21113,8 @@ function compareArrays(array1, array2, tolerance) {
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21113
21113
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return false;
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21114
21114
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}
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21115
21115
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21116
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-
for (var
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21117
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-
if (!nearlyEqual(array1[
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21116
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+
for (var _i4 = 0; _i4 < array1.length; ++_i4) {
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21117
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+
if (!nearlyEqual(array1[_i4], array2[_i4], tolerance)) {
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21118
21118
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return false;
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21119
21119
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}
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21120
21120
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}
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