dcmjs 0.29.2 → 0.29.3

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package/build/dcmjs.es.js CHANGED
@@ -20230,28 +20230,28 @@ function fillSegmentation(segmentation, inputLabelmaps3D) {
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  metadata = labelmap3D.metadata;
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  var referencedFramesPerSegment = [];
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20233
- for (var _i = 1; _i < metadata.length; _i++) {
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- if (metadata[_i]) {
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- referencedFramesPerSegment[_i] = [];
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+ for (var i = 1; i < metadata.length; i++) {
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+ if (metadata[i]) {
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+ referencedFramesPerSegment[i] = [];
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  }
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  }
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20239
- var _loop2 = function _loop2(_i2) {
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- var labelmap2D = labelmaps2D[_i2];
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+ var _loop2 = function _loop2(_i) {
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+ var labelmap2D = labelmaps2D[_i];
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20242
- if (labelmaps2D[_i2]) {
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+ if (labelmaps2D[_i]) {
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  var segmentsOnLabelmap = labelmap2D.segmentsOnLabelmap;
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  segmentsOnLabelmap.forEach(function (segmentIndex) {
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  if (segmentIndex !== 0) {
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- referencedFramesPerSegment[segmentIndex].push(_i2);
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+ referencedFramesPerSegment[segmentIndex].push(_i);
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  numberOfFrames++;
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  }
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  });
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  }
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  };
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- for (var _i2 = 0; _i2 < labelmaps2D.length; _i2++) {
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- _loop2(_i2);
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+ for (var _i = 0; _i < labelmaps2D.length; _i++) {
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+ _loop2(_i);
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  }
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20256
 
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  referencedFramesPerLabelmap[labelmapIndex] = referencedFramesPerSegment;
@@ -20317,8 +20317,8 @@ function _getLabelmapsFromRefernecedFrameIndicies(labelmap3D, referencedFrameInd
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  var labelmaps2D = labelmap3D.labelmaps2D;
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  var labelmaps = [];
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- for (var _i3 = 0; _i3 < referencedFrameIndicies.length; _i3++) {
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- var frame = referencedFrameIndicies[_i3];
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+ for (var i = 0; i < referencedFrameIndicies.length; i++) {
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+ var frame = referencedFrameIndicies[i];
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  labelmaps.push(labelmaps2D[frame].pixelData);
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  }
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@@ -20344,8 +20344,8 @@ function _createSegFromImages$1(images, isMultiframe, options) {
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  dataset._meta = DicomMetaDictionary.namifyDataset(dicomData.meta);
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  datasets.push(dataset);
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  } else {
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- for (var _i4 = 0; _i4 < images.length; _i4++) {
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- var _image = images[_i4];
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+ for (var i = 0; i < images.length; i++) {
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+ var _image = images[i];
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  var _arrayBuffer = _image.data.byteArray.buffer;
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  var _dicomData = DicomMessage.readFile(_arrayBuffer);
@@ -20581,7 +20581,7 @@ function checkSEGsOverlapping(pixelData, multiframe, imageIds, validOrientations
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  var imageId = findReferenceSourceImageId(multiframe, frameSegment, imageIds, metadataProvider, tolerance);
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  if (!imageId) {
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- console.warn("Image not present in stack, can't import frame : " + i + ".");
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+ console.warn("Image not present in stack, can't import frame : " + frameSegment + ".");
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  return "continue";
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  }
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@@ -20618,8 +20618,8 @@ function checkSEGsOverlapping(pixelData, multiframe, imageIds, validOrientations
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  var temp2DArray = new Uint16Array(sliceLength).fill(0);
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- for (var _i5 = 0; _i5 < role.length; ++_i5) {
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- var _frameSegment = role[_i5];
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+ for (var i = 0; i < role.length; ++i) {
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+ var _frameSegment = role[i];
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  var PerFrameFunctionalGroups = PerFrameFunctionalGroupsSequence[_frameSegment];
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  var ImageOrientationPatientI = sharedImageOrientationPatient || PerFrameFunctionalGroups.PlaneOrientationSequence.ImageOrientationPatient;
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  var pixelDataI2D = ndarray(new Uint8Array(pixelData.buffer, _frameSegment * sliceLength, sliceLength), [Rows, Columns]);
@@ -20679,32 +20679,32 @@ function insertOverlappingPixelDataPlanar(segmentsOnFrame, segmentsOnFrameArray,
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  var numberOfSegs = multiframe.SegmentSequence.length;
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20681
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  for (var segmentIndexToProcess = 1; segmentIndexToProcess <= numberOfSegs; ++segmentIndexToProcess) {
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- var _loop4 = function _loop4(groupsLen, _i7) {
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- var PerFrameFunctionalGroups = PerFrameFunctionalGroupsSequence[_i7];
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- var segmentIndex = getSegmentIndex(multiframe, _i7);
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+ var _loop4 = function _loop4(_i2, groupsLen) {
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+ var PerFrameFunctionalGroups = PerFrameFunctionalGroupsSequence[_i2];
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+ var segmentIndex = getSegmentIndex(multiframe, _i2);
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20686
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  if (segmentIndex === undefined) {
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  throw new Error("Could not retrieve the segment index. Aborting segmentation loading.");
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  }
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20690
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  if (segmentIndex !== segmentIndexToProcess) {
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- _i6 = _i7;
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+ i = _i2;
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  return "continue";
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  }
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  var ImageOrientationPatientI = sharedImageOrientationPatient || PerFrameFunctionalGroups.PlaneOrientationSequence.ImageOrientationPatient;
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- var pixelDataI2D = ndarray(new Uint8Array(pixelData.buffer, _i7 * sliceLength, sliceLength), [Rows, Columns]);
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+ var pixelDataI2D = ndarray(new Uint8Array(pixelData.buffer, _i2 * sliceLength, sliceLength), [Rows, Columns]);
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  var alignedPixelDataI = alignPixelDataWithSourceData$1(pixelDataI2D, ImageOrientationPatientI, validOrientations, tolerance);
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  if (!alignedPixelDataI) {
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  throw new Error("Individual SEG frames are out of plane with respect to the first SEG frame. " + "This is not yet supported. Aborting segmentation loading.");
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  }
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20703
- var imageId = findReferenceSourceImageId(multiframe, _i7, imageIds, metadataProvider, tolerance);
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+ var imageId = findReferenceSourceImageId(multiframe, _i2, imageIds, metadataProvider, tolerance);
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  if (!imageId) {
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- console.warn("Image not present in stack, can't import frame : " + _i7 + ".");
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- _i6 = _i7;
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+ console.warn("Image not present in stack, can't import frame : " + _i2 + ".");
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+ i = _i2;
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  return "continue";
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  }
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@@ -20736,7 +20736,7 @@ function insertOverlappingPixelDataPlanar(segmentsOnFrame, segmentsOnFrameArray,
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  tempBuffer = labelmapBufferArray[m].slice(0);
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  tempSegmentsOnFrame = lodash_clonedeep(segmentsOnFrameArray[m]);
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- _i7 = 0;
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+ _i2 = 0;
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  break;
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  } else {
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  labelmap2DView[j] = segmentIndex;
@@ -20759,11 +20759,11 @@ function insertOverlappingPixelDataPlanar(segmentsOnFrame, segmentsOnFrameArray,
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  segmentsOnFrame[imageIdIndex].push(segmentIndex);
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  }
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- _i6 = _i7;
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+ i = _i2;
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  };
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20765
- for (var _i6 = 0, groupsLen = PerFrameFunctionalGroupsSequence.length; _i6 < groupsLen; ++_i6) {
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- var _ret2 = _loop4(groupsLen, _i6);
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+ for (var i = 0, groupsLen = PerFrameFunctionalGroupsSequence.length; i < groupsLen; ++i) {
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+ var _ret2 = _loop4(i, groupsLen);
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  if (_ret2 === "continue") continue;
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  }
@@ -20792,26 +20792,26 @@ function insertPixelDataPlanar(segmentsOnFrame, segmentsOnFrameArray, labelmapBu
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  var sharedImageOrientationPatient = SharedFunctionalGroupsSequence.PlaneOrientationSequence ? SharedFunctionalGroupsSequence.PlaneOrientationSequence.ImageOrientationPatient : undefined;
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  var sliceLength = Columns * Rows;
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- var _loop5 = function _loop5(groupsLen, _i8) {
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- var PerFrameFunctionalGroups = PerFrameFunctionalGroupsSequence[_i8];
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+ var _loop5 = function _loop5(groupsLen, _i3) {
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+ var PerFrameFunctionalGroups = PerFrameFunctionalGroupsSequence[_i3];
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  var ImageOrientationPatientI = sharedImageOrientationPatient || PerFrameFunctionalGroups.PlaneOrientationSequence.ImageOrientationPatient;
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- var pixelDataI2D = ndarray(new Uint8Array(pixelData.buffer, _i8 * sliceLength, sliceLength), [Rows, Columns]);
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+ var pixelDataI2D = ndarray(new Uint8Array(pixelData.buffer, _i3 * sliceLength, sliceLength), [Rows, Columns]);
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  var alignedPixelDataI = alignPixelDataWithSourceData$1(pixelDataI2D, ImageOrientationPatientI, validOrientations, tolerance);
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  if (!alignedPixelDataI) {
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  throw new Error("Individual SEG frames are out of plane with respect to the first SEG frame. " + "This is not yet supported. Aborting segmentation loading.");
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  }
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20805
- var segmentIndex = getSegmentIndex(multiframe, _i8);
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+ var segmentIndex = getSegmentIndex(multiframe, _i3);
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20806
 
20807
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  if (segmentIndex === undefined) {
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  throw new Error("Could not retrieve the segment index. Aborting segmentation loading.");
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  }
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20811
- var imageId = findReferenceSourceImageId(multiframe, _i8, imageIds, metadataProvider, tolerance);
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+ var imageId = findReferenceSourceImageId(multiframe, _i3, imageIds, metadataProvider, tolerance);
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20813
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  if (!imageId) {
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- console.warn("Image not present in stack, can't import frame : " + _i8 + ".");
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+ console.warn("Image not present in stack, can't import frame : " + _i3 + ".");
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  return "continue";
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  }
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@@ -20847,8 +20847,8 @@ function insertPixelDataPlanar(segmentsOnFrame, segmentsOnFrameArray, labelmapBu
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  }
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  };
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20850
- for (var _i8 = 0, groupsLen = PerFrameFunctionalGroupsSequence.length; _i8 < groupsLen; ++_i8) {
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- var _ret3 = _loop5(groupsLen, _i8);
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+ for (var _i3 = 0, groupsLen = PerFrameFunctionalGroupsSequence.length; _i3 < groupsLen; ++_i3) {
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+ var _ret3 = _loop5(groupsLen, _i3);
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20852
 
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  if (_ret3 === "continue") continue;
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  }
@@ -21113,8 +21113,8 @@ function compareArrays(array1, array2, tolerance) {
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  return false;
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  }
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21116
- for (var _i9 = 0; _i9 < array1.length; ++_i9) {
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- if (!nearlyEqual(array1[_i9], array2[_i9], tolerance)) {
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+ for (var _i4 = 0; _i4 < array1.length; ++_i4) {
21117
+ if (!nearlyEqual(array1[_i4], array2[_i4], tolerance)) {
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  return false;
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  }
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  }