curtain-web-api 1.0.47 → 1.0.49

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Files changed (7) hide show
  1. package/build/classes/curtain-api.d.ts +6 -2
  2. package/build/classes/curtain-api.js +38 -13
  3. package/build/classes/curtain-encryption.js +27 -28
  4. package/build/classes/curtain-user.d.ts +0 -4
  5. package/build/utilities.js +5 -6
  6. package/package.json +1 -1
  7. package/src/classes/curtain-api.ts +31 -5
package/build/classes/curtain-api.d.ts CHANGED
@@ -9,6 +9,7 @@ export declare class CurtainWebAPI {
9
9
  orcidLoginURL: string;
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10
  userInfoURL: string;
11
11
  curtainURL: string;
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+ dataciteURL: string;
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  user: User;
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14
  isRefreshing: boolean;
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  axiosInstance: import("axios").AxiosInstance;
@@ -21,7 +22,7 @@ export declare class CurtainWebAPI {
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  ORCIDLogin(authorizationCode: string, redirectURI: string): Promise<User>;
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  checkIfRefreshTokenExpired(): boolean;
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  deleteCurtainLink(curtainLinkID: string): Promise<import("axios").AxiosResponse<any, any>>;
24
- putSettings(settings: any, enable?: boolean, description?: string, sessionType?: string, encryption?: CurtainEncryption, onUploadProgress?: any): Promise<import("axios").AxiosResponse<any, any>>;
25
+ putSettings(settings: any, enable?: boolean, description?: string, sessionType?: string, encryption?: CurtainEncryption, permanent?: boolean, onUploadProgress?: any): Promise<import("axios").AxiosResponse<any, any>>;
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  postSettings(id: string, token: string, onDownloadProgress?: any): Promise<import("axios").AxiosResponse<any, any>>;
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27
  getPrideData(accession: string): Promise<import("axios").AxiosResponse<any, any>>;
27
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  generateTemporarySession(linkId: string, lifetime: number): Promise<import("axios").AxiosResponse<any, any>>;
@@ -33,7 +34,7 @@ export declare class CurtainWebAPI {
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  getCurtainLinks(username: string, sessionDescription?: string, offset?: number, sessionType?: string): Promise<import("axios").AxiosResponse<any, any>>;
34
35
  getSiteProperties(): Promise<import("axios").AxiosResponse<any, any>>;
35
36
  saveDataFilterList(name: string, data: string, category?: string): Promise<import("axios").AxiosResponse<any, any>>;
36
- getDataFilterListByID(id: number): Promise<import("axios").AxiosResponse<any, any>>;
37
+ getDataFilterListByID(id: number, limit?: number): Promise<import("axios").AxiosResponse<any, any>>;
37
38
  getDataFilterList(title?: string, searchTerm?: string, category?: string, limit?: number): Promise<import("axios").AxiosResponse<any, any>>;
38
39
  getDataFilterListByCategory(category: string): Promise<import("axios").AxiosResponse<any, any>>;
39
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  deleteDataFilterList(id: number): Promise<import("axios").AxiosResponse<any, any>>;
@@ -48,4 +49,7 @@ export declare class CurtainWebAPI {
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49
  createCurtainAPIKey(name: string): Promise<import("axios").AxiosResponse<any, any>>;
49
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  getCurtainAPIKeys(): Promise<import("axios").AxiosResponse<any, any>>;
50
51
  deleteCurtainAPIKey(id: number): Promise<import("axios").AxiosResponse<any, any>>;
52
+ getRandomDataCiteSuffix(): Promise<import("axios").AxiosResponse<any, any>>;
53
+ submitDataCite(data: any): Promise<import("axios").AxiosResponse<any, any>>;
54
+ getDataCite(id: number): Promise<import("axios").AxiosResponse<any, any>>;
51
55
  }
package/build/classes/curtain-api.js CHANGED
@@ -66,6 +66,7 @@ class CurtainWebAPI {
66
66
  this.orcidLoginURL = "";
67
67
  this.userInfoURL = "";
68
68
  this.curtainURL = "";
69
+ this.dataciteURL = "";
69
70
  this.user = new curtain_user_1.User();
70
71
  this.isRefreshing = false;
71
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  this.axiosInstance = axios_1.default.create();
@@ -77,6 +78,7 @@ class CurtainWebAPI {
77
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  this.orcidLoginURL = baseURL + "rest-auth/orcid/";
78
79
  this.userInfoURL = baseURL + "user/";
79
80
  this.curtainURL = baseURL + "curtain/";
81
+ this.dataciteURL = baseURL + "datacite/";
80
82
  this.axiosInstance.interceptors.request.use((config) => {
81
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  if (config.url) {
82
84
  /*if (!this.checkIfRefreshTokenExpired() && this.user.loginStatus) {
@@ -106,7 +108,7 @@ class CurtainWebAPI {
106
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  config.url === this.userInfoURL ||
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109
  config.url.startsWith(this.curtainURL) ||
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  config.url.startsWith(this.baseURL + "data_filter_list/") ||
109
- config.url.startsWith(this.baseURL + "api_key/")) {
111
+ config.url.startsWith(this.baseURL + "api_key/") || config.url.startsWith(this.dataciteURL)) {
110
112
  if (this.user.loginStatus) {
111
113
  config.headers["Authorization"] = "Bearer " + this.user.access_token;
112
114
  }
@@ -219,11 +221,11 @@ class CurtainWebAPI {
219
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  return response;
220
222
  });
221
223
  }
222
- putSettings(settings, enable = true, description = "", sessionType = "TP", encryption = {
223
- encrypted: false,
224
- e2e: false,
225
- }, onUploadProgress = undefined) {
226
- return __awaiter(this, void 0, void 0, function* () {
224
+ putSettings(settings_1) {
225
+ return __awaiter(this, arguments, void 0, function* (settings, enable = true, description = "", sessionType = "TP", encryption = {
226
+ encrypted: false,
227
+ e2e: false,
228
+ }, permanent = false, onUploadProgress = undefined) {
227
229
  let form = new FormData();
228
230
  let data = JSON.stringify(settings, exports.replacer);
229
231
  if (enable) {
@@ -244,6 +246,12 @@ class CurtainWebAPI {
244
246
  else {
245
247
  form.append("e2e", "False");
246
248
  }
249
+ if (permanent) {
250
+ form.append("permanent", "True");
251
+ }
252
+ else {
253
+ form.append("permanent", "False");
254
+ }
247
255
  if (encryption.encrypted && encryption.e2e && encryption.publicKey !== undefined) {
248
256
  const aesKey = yield (0, curtain_encryption_1.generateAESKey)();
249
257
  console.log("Encrypting data");
@@ -313,11 +321,11 @@ class CurtainWebAPI {
313
321
  return response;
314
322
  });
315
323
  }
316
- updateSession(sessionData, linkId, encryption = {
317
- encrypted: false,
318
- e2e: false,
319
- }) {
320
- return __awaiter(this, void 0, void 0, function* () {
324
+ updateSession(sessionData_1, linkId_1) {
325
+ return __awaiter(this, arguments, void 0, function* (sessionData, linkId, encryption = {
326
+ encrypted: false,
327
+ e2e: false,
328
+ }) {
321
329
  let form = new FormData();
322
330
  if ("file" in sessionData) {
323
331
  let data = JSON.stringify(sessionData["file"], exports.replacer);
@@ -424,10 +432,11 @@ class CurtainWebAPI {
424
432
  return response;
425
433
  });
426
434
  }
427
- getDataFilterListByID(id) {
435
+ getDataFilterListByID(id, limit = 100) {
428
436
  let headers = new axios_1.AxiosHeaders();
429
437
  headers["Accept"] = "application/json";
430
- return this.axiosInstance.get(this.baseURL + "data_filter_list/" + id + "/", { headers: headers, responseType: "json" }).then((response) => {
438
+ let params = { limit: limit.toString() };
439
+ return this.axiosInstance.get(this.baseURL + "data_filter_list/" + id + "/", { headers: headers, responseType: "json", }).then((response) => {
431
440
  return response;
432
441
  });
433
442
  }
@@ -540,5 +549,21 @@ class CurtainWebAPI {
540
549
  headers["Content-Type"] = "application/json";
541
550
  return this.axiosInstance.delete(this.baseURL + "api_key/" + id + "/", { headers: headers, responseType: "json" });
542
551
  }
552
+ getRandomDataCiteSuffix() {
553
+ let headers = new axios_1.AxiosHeaders();
554
+ headers["Accept"] = "application/json";
555
+ return this.axiosInstance.get(this.baseURL + "datacite/get_random_suffix/", { headers: headers, responseType: "json" });
556
+ }
557
+ submitDataCite(data) {
558
+ let headers = new axios_1.AxiosHeaders();
559
+ headers["Accept"] = "application/json";
560
+ headers["Content-Type"] = "application/json";
561
+ return this.axiosInstance.post(this.baseURL + "datacite/", data, { headers: headers, responseType: "json" });
562
+ }
563
+ getDataCite(id) {
564
+ let headers = new axios_1.AxiosHeaders();
565
+ headers["Accept"] = "application/json";
566
+ return this.axiosInstance.get(this.baseURL + "datacite/" + id + "/", { headers: headers, responseType: "json" });
567
+ }
543
568
  }
544
569
  exports.CurtainWebAPI = CurtainWebAPI;
package/build/classes/curtain-encryption.js CHANGED
@@ -9,29 +9,49 @@ var __awaiter = (this && this.__awaiter) || function (thisArg, _arguments, P, ge
9
9
  });
10
10
  };
11
11
  Object.defineProperty(exports, "__esModule", { value: true });
12
- exports.hashData = exports.decryptDataAES = exports.encryptDataAES = exports.importAESKey = exports.exportAESKey = exports.decryptAESKey = exports.decryptAESData = exports.encryptAESData = exports.generateAESKey = exports.encryptAESKey = exports.pemToArrayBuffer = exports.base64ToArrayBuffer = exports.removeLines = exports.arrayBufferToBase64String = exports.loadFromLocalStorage = exports.saveToLocalStorage = exports.exportKeyString = exports.importKey = exports.exportPrivateKey = exports.exportPublicKey = exports.generateKeyPair = exports.importPrivateKey = exports.importPublicKey = exports.decryptDataRSA = exports.encryptDataRSA = void 0;
12
+ exports.encryptDataRSA = encryptDataRSA;
13
+ exports.decryptDataRSA = decryptDataRSA;
14
+ exports.importPublicKey = importPublicKey;
15
+ exports.importPrivateKey = importPrivateKey;
16
+ exports.generateKeyPair = generateKeyPair;
17
+ exports.exportPublicKey = exportPublicKey;
18
+ exports.exportPrivateKey = exportPrivateKey;
19
+ exports.importKey = importKey;
20
+ exports.exportKeyString = exportKeyString;
21
+ exports.saveToLocalStorage = saveToLocalStorage;
22
+ exports.loadFromLocalStorage = loadFromLocalStorage;
23
+ exports.arrayBufferToBase64String = arrayBufferToBase64String;
24
+ exports.removeLines = removeLines;
25
+ exports.base64ToArrayBuffer = base64ToArrayBuffer;
26
+ exports.pemToArrayBuffer = pemToArrayBuffer;
27
+ exports.encryptAESKey = encryptAESKey;
28
+ exports.generateAESKey = generateAESKey;
29
+ exports.encryptAESData = encryptAESData;
30
+ exports.decryptAESData = decryptAESData;
31
+ exports.decryptAESKey = decryptAESKey;
32
+ exports.exportAESKey = exportAESKey;
33
+ exports.importAESKey = importAESKey;
34
+ exports.encryptDataAES = encryptDataAES;
35
+ exports.decryptDataAES = decryptDataAES;
36
+ exports.hashData = hashData;
13
37
  function encryptDataRSA(data, publicKey) {
14
38
  return crypto.subtle.encrypt({ name: 'RSA-OAEP' }, publicKey, new TextEncoder().encode(data));
15
39
  }
16
- exports.encryptDataRSA = encryptDataRSA;
17
40
  function decryptDataRSA(data, privateKey) {
18
41
  return crypto.subtle.decrypt({ name: 'RSA-OAEP' }, privateKey, new TextEncoder().encode(data));
19
42
  }
20
- exports.decryptDataRSA = decryptDataRSA;
21
43
  function importPublicKey(key) {
22
44
  return __awaiter(this, void 0, void 0, function* () {
23
45
  return yield crypto.subtle.importKey('spki', key, { name: 'RSA-OAEP', hash: 'SHA-256' }, true, ['encrypt']);
24
46
  });
25
47
  }
26
- exports.importPublicKey = importPublicKey;
27
48
  function importPrivateKey(key) {
28
49
  return __awaiter(this, void 0, void 0, function* () {
29
50
  return yield crypto.subtle.importKey('pkcs8', key, { name: 'RSA-OAEP', hash: 'SHA-256' }, true, ['decrypt']);
30
51
  });
31
52
  }
32
- exports.importPrivateKey = importPrivateKey;
33
- function generateKeyPair(modulusLength = 2048, publicExponent = new Uint8Array([1, 0, 1])) {
34
- return __awaiter(this, void 0, void 0, function* () {
53
+ function generateKeyPair() {
54
+ return __awaiter(this, arguments, void 0, function* (modulusLength = 2048, publicExponent = new Uint8Array([1, 0, 1])) {
35
55
  return yield crypto.subtle.generateKey({
36
56
  name: "RSA-OAEP",
37
57
  modulusLength: modulusLength,
@@ -40,19 +60,16 @@ function generateKeyPair(modulusLength = 2048, publicExponent = new Uint8Array([
40
60
  }, true, ["encrypt", "decrypt"]);
41
61
  });
42
62
  }
43
- exports.generateKeyPair = generateKeyPair;
44
63
  function exportPublicKey(key) {
45
64
  return __awaiter(this, void 0, void 0, function* () {
46
65
  return yield crypto.subtle.exportKey('spki', key);
47
66
  });
48
67
  }
49
- exports.exportPublicKey = exportPublicKey;
50
68
  function exportPrivateKey(key) {
51
69
  return __awaiter(this, void 0, void 0, function* () {
52
70
  return yield crypto.subtle.exportKey('pkcs8', key);
53
71
  });
54
72
  }
55
- exports.exportPrivateKey = exportPrivateKey;
56
73
  function importKey(key, type) {
57
74
  return __awaiter(this, void 0, void 0, function* () {
58
75
  if (type === "public") {
@@ -63,7 +80,6 @@ function importKey(key, type) {
63
80
  }
64
81
  });
65
82
  }
66
- exports.importKey = importKey;
67
83
  function exportKeyString(key, type) {
68
84
  return __awaiter(this, void 0, void 0, function* () {
69
85
  if (type === "public") {
@@ -76,14 +92,12 @@ function exportKeyString(key, type) {
76
92
  }
77
93
  });
78
94
  }
79
- exports.exportKeyString = exportKeyString;
80
95
  function saveToLocalStorage(key, type) {
81
96
  return __awaiter(this, void 0, void 0, function* () {
82
97
  const k = yield exportKeyString(key, type);
83
98
  localStorage.setItem(type + "_key", k);
84
99
  });
85
100
  }
86
- exports.saveToLocalStorage = saveToLocalStorage;
87
101
  function loadFromLocalStorage(type) {
88
102
  return __awaiter(this, void 0, void 0, function* () {
89
103
  const k = localStorage.getItem(type + "_key");
@@ -93,7 +107,6 @@ function loadFromLocalStorage(type) {
93
107
  return undefined;
94
108
  });
95
109
  }
96
- exports.loadFromLocalStorage = loadFromLocalStorage;
97
110
  function arrayBufferToBase64String(arrayBuffer) {
98
111
  const byteArray = new Uint8Array(arrayBuffer);
99
112
  let byteString = '';
@@ -102,11 +115,9 @@ function arrayBufferToBase64String(arrayBuffer) {
102
115
  }
103
116
  return btoa(byteString);
104
117
  }
105
- exports.arrayBufferToBase64String = arrayBufferToBase64String;
106
118
  function removeLines(str_data) {
107
119
  return str_data.replace("\n", "");
108
120
  }
109
- exports.removeLines = removeLines;
110
121
  function base64ToArrayBuffer(b64) {
111
122
  const byteString = atob(b64);
112
123
  const byteArray = new Uint8Array(byteString.length);
@@ -115,7 +126,6 @@ function base64ToArrayBuffer(b64) {
115
126
  }
116
127
  return byteArray;
117
128
  }
118
- exports.base64ToArrayBuffer = base64ToArrayBuffer;
119
129
  function pemToArrayBuffer(pem) {
120
130
  const b64Lines = removeLines(pem);
121
131
  let b64Prefix = b64Lines.replace('-----BEGIN PRIVATE KEY-----', '');
@@ -124,14 +134,12 @@ function pemToArrayBuffer(pem) {
124
134
  b64Final = b64Final.replace('-----END PUBLIC KEY-----', '');
125
135
  return base64ToArrayBuffer(b64Final);
126
136
  }
127
- exports.pemToArrayBuffer = pemToArrayBuffer;
128
137
  // a function to generate to encrypt an aes key arraybuffer with a public key
129
138
  function encryptAESKey(publicKey, aesKey) {
130
139
  return __awaiter(this, void 0, void 0, function* () {
131
140
  return yield crypto.subtle.encrypt({ name: "RSA-OAEP" }, publicKey, aesKey);
132
141
  });
133
142
  }
134
- exports.encryptAESKey = encryptAESKey;
135
143
  // a function to generate an aes key in GCM mode with a length of 256 bits
136
144
  function generateAESKey() {
137
145
  return __awaiter(this, void 0, void 0, function* () {
@@ -141,7 +149,6 @@ function generateAESKey() {
141
149
  }, true, ["encrypt", "decrypt"]);
142
150
  });
143
151
  }
144
- exports.generateAESKey = generateAESKey;
145
152
  // a function to encrypt a string with an aes key
146
153
  function encryptAESData(aesKey, data) {
147
154
  return __awaiter(this, void 0, void 0, function* () {
@@ -152,7 +159,6 @@ function encryptAESData(aesKey, data) {
152
159
  return { encrypted: arrayBufferToBase64String(encrypted), iv: arrayBufferToBase64String(iv) };
153
160
  });
154
161
  }
155
- exports.encryptAESData = encryptAESData;
156
162
  // a function to decrypt a string with an aes key
157
163
  function decryptAESData(aesKey, data, iv) {
158
164
  return __awaiter(this, void 0, void 0, function* () {
@@ -161,28 +167,24 @@ function decryptAESData(aesKey, data, iv) {
161
167
  return dec.decode(decrypted);
162
168
  });
163
169
  }
164
- exports.decryptAESData = decryptAESData;
165
170
  // a function to decrypt an aes key with a private key
166
171
  function decryptAESKey(privateKey, encryptedKey) {
167
172
  return __awaiter(this, void 0, void 0, function* () {
168
173
  return yield crypto.subtle.decrypt({ name: "RSA-OAEP" }, privateKey, encryptedKey);
169
174
  });
170
175
  }
171
- exports.decryptAESKey = decryptAESKey;
172
176
  // a function to export an aes key to a string
173
177
  function exportAESKey(key) {
174
178
  return __awaiter(this, void 0, void 0, function* () {
175
179
  return yield crypto.subtle.exportKey("raw", key);
176
180
  });
177
181
  }
178
- exports.exportAESKey = exportAESKey;
179
182
  // a function to import an aes key from a string
180
183
  function importAESKey(key) {
181
184
  return __awaiter(this, void 0, void 0, function* () {
182
185
  return yield crypto.subtle.importKey("raw", key, "AES-GCM", true, ["encrypt", "decrypt"]);
183
186
  });
184
187
  }
185
- exports.importAESKey = importAESKey;
186
188
  // a function to encrypt aes key with a public key and also use the aes key to encrypt a large string then return the encrypted aes key and the encrypted string
187
189
  function encryptDataAES(data, publicKey) {
188
190
  return __awaiter(this, void 0, void 0, function* () {
@@ -192,7 +194,6 @@ function encryptDataAES(data, publicKey) {
192
194
  return { encryptedKey: arrayBufferToBase64String(encryptedKey), encryptedData: encryptedData };
193
195
  });
194
196
  }
195
- exports.encryptDataAES = encryptDataAES;
196
197
  // a function to decrypt an aes key with a private key and use the aes key to decrypt a large string
197
198
  function decryptDataAES(encryptedKey, encryptedData, iv, privateKey) {
198
199
  return __awaiter(this, void 0, void 0, function* () {
@@ -201,7 +202,6 @@ function decryptDataAES(encryptedKey, encryptedData, iv, privateKey) {
201
202
  return yield decryptAESData(yield importAESKey(aesKey), encryptedData, iv);
202
203
  });
203
204
  }
204
- exports.decryptDataAES = decryptDataAES;
205
205
  // a function to calculate sha-256 hash of a large string
206
206
  function hashData(data) {
207
207
  return __awaiter(this, void 0, void 0, function* () {
@@ -211,4 +211,3 @@ function hashData(data) {
211
211
  return arrayBufferToBase64String(hash);
212
212
  });
213
213
  }
214
- exports.hashData = hashData;
package/build/classes/curtain-user.d.ts CHANGED
@@ -1,7 +1,3 @@
1
- /// <reference types="pouchdb-find" />
2
- /// <reference types="pouchdb-core" />
3
- /// <reference types="pouchdb-mapreduce" />
4
- /// <reference types="pouchdb-replication" />
5
1
  export declare class User {
6
2
  get refresh_token(): string;
7
3
  set refresh_token(value: string);
package/build/utilities.js CHANGED
@@ -23,7 +23,11 @@ var __importStar = (this && this.__importStar) || function (mod) {
23
23
  return result;
24
24
  };
25
25
  Object.defineProperty(exports, "__esModule", { value: true });
26
- exports.getInteractomeAtlas = exports.getStringDBInteractions = exports.getEBIAlpha = exports.getPrideData = exports.getProteomicsData = void 0;
26
+ exports.getProteomicsData = getProteomicsData;
27
+ exports.getPrideData = getPrideData;
28
+ exports.getEBIAlpha = getEBIAlpha;
29
+ exports.getStringDBInteractions = getStringDBInteractions;
30
+ exports.getInteractomeAtlas = getInteractomeAtlas;
27
31
  const axios_1 = __importStar(require("axios"));
28
32
  function getProteomicsData(acc, tissueType) {
29
33
  let headers = new axios_1.AxiosHeaders();
@@ -31,18 +35,15 @@ function getProteomicsData(acc, tissueType) {
31
35
  headers["Content-Type"] = "application/json";
32
36
  return axios_1.default.get("https://www.proteomicsdb.org/proteomicsdb/logic/api/proteinexpression.xsodata/InputParams(PROTEINFILTER='" + acc + "',MS_LEVEL=1,TISSUE_ID_SELECTION='',TISSUE_CATEGORY_SELECTION='" + tissueType + "',SCOPE_SELECTION=1,GROUP_BY_TISSUE=1,CALCULATION_METHOD=0,EXP_ID=-1)/Results?$select=UNIQUE_IDENTIFIER,TISSUE_ID,TISSUE_NAME,TISSUE_SAP_SYNONYM,SAMPLE_ID,SAMPLE_NAME,AFFINITY_PURIFICATION,EXPERIMENT_ID,EXPERIMENT_NAME,EXPERIMENT_SCOPE,EXPERIMENT_SCOPE_NAME,PROJECT_ID,PROJECT_NAME,PROJECT_STATUS,UNNORMALIZED_INTENSITY,NORMALIZED_INTENSITY,MIN_NORMALIZED_INTENSITY,MAX_NORMALIZED_INTENSITY,SAMPLES&$format=json", { responseType: "json" });
33
37
  }
34
- exports.getProteomicsData = getProteomicsData;
35
38
  function getPrideData(acc) {
36
39
  let headers = new axios_1.AxiosHeaders();
37
40
  headers["Accept"] = "application/json";
38
41
  headers["Content-Type"] = "application/json";
39
42
  return axios_1.default.get("https://www.ebi.ac.uk/pride/ws/archive/v2/projects/" + acc, { responseType: "json", headers: headers });
40
43
  }
41
- exports.getPrideData = getPrideData;
42
44
  function getEBIAlpha(id) {
43
45
  return axios_1.default.get("https://alphafold.ebi.ac.uk/" + "/api/prediction/" + id, { responseType: "json" });
44
46
  }
45
- exports.getEBIAlpha = getEBIAlpha;
46
47
  function getStringDBInteractions(genes, organism, score = 400, networkType = "functional") {
47
48
  let params = new URLSearchParams();
48
49
  params.append("identifiers", genes.join("%0d"));
@@ -51,7 +52,6 @@ function getStringDBInteractions(genes, organism, score = 400, networkType = "fu
51
52
  params.append("network_type", networkType);
52
53
  return axios_1.default.get("https://string-db.org/api/tsv/network?", { responseType: "text", params: params });
53
54
  }
54
- exports.getStringDBInteractions = getStringDBInteractions;
55
55
  function getInteractomeAtlas(genes, filterParameter = "None") {
56
56
  let params = new URLSearchParams();
57
57
  params.append("query_interactors", "query");
@@ -66,4 +66,3 @@ function getInteractomeAtlas(genes, filterParameter = "None") {
66
66
  return JSON.parse(res.data);
67
67
  });
68
68
  }
69
- exports.getInteractomeAtlas = getInteractomeAtlas;
package/package.json CHANGED
@@ -1,6 +1,6 @@
1
1
  {
2
2
  "name": "curtain-web-api",
3
- "version": "1.0.47",
3
+ "version": "1.0.49",
4
4
  "description": "",
5
5
  "main": "./build/index.js",
6
6
  "types": "./build/index.d.ts",
package/src/classes/curtain-api.ts CHANGED
@@ -37,6 +37,7 @@ export class CurtainWebAPI {
37
37
  orcidLoginURL: string = "";
38
38
  userInfoURL: string = "";
39
39
  curtainURL: string = "";
40
+ dataciteURL: string = "";
40
41
  user: User = new User();
41
42
  isRefreshing: boolean = false;
42
43
  axiosInstance = axios.create()
@@ -50,6 +51,7 @@ export class CurtainWebAPI {
50
51
  this.orcidLoginURL = baseURL + "rest-auth/orcid/";
51
52
  this.userInfoURL = baseURL + "user/";
52
53
  this.curtainURL = baseURL + "curtain/"
54
+ this.dataciteURL = baseURL + "datacite/"
53
55
  this.axiosInstance.interceptors.request.use((config) => {
54
56
  if (config.url) {
55
57
  /*if (!this.checkIfRefreshTokenExpired() && this.user.loginStatus) {
@@ -79,7 +81,7 @@ export class CurtainWebAPI {
79
81
  config.url === this.userInfoURL ||
80
82
  config.url.startsWith(this.curtainURL) ||
81
83
  config.url.startsWith(this.baseURL + "data_filter_list/") ||
82
- config.url.startsWith(this.baseURL + "api_key/")) {
84
+ config.url.startsWith(this.baseURL + "api_key/")|| config.url.startsWith(this.dataciteURL)) {
83
85
  if (this.user.loginStatus) {
84
86
  config.headers["Authorization"] = "Bearer " + this.user.access_token;
85
87
  }
@@ -209,7 +211,7 @@ export class CurtainWebAPI {
209
211
  async putSettings(settings: any, enable: boolean = true, description: string = "", sessionType: string = "TP", encryption: CurtainEncryption = {
210
212
  encrypted: false,
211
213
  e2e: false,
212
- }, onUploadProgress: any = undefined) {
214
+ }, permanent: boolean = false, onUploadProgress: any = undefined) {
213
215
  let form: FormData = new FormData();
214
216
  let data = JSON.stringify(settings, replacer)
215
217
  if (enable) {
@@ -227,7 +229,11 @@ export class CurtainWebAPI {
227
229
  } else {
228
230
  form.append("e2e", "False")
229
231
  }
230
-
232
+ if (permanent) {
233
+ form.append("permanent", "True")
234
+ } else {
235
+ form.append("permanent", "False")
236
+ }
231
237
  if (encryption.encrypted && encryption.e2e && encryption.publicKey !== undefined) {
232
238
  const aesKey = await generateAESKey()
233
239
  console.log("Encrypting data")
@@ -419,10 +425,11 @@ export class CurtainWebAPI {
419
425
  });
420
426
  }
421
427
 
422
- getDataFilterListByID(id: number) {
428
+ getDataFilterListByID(id: number, limit: number = 100) {
423
429
  let headers = new AxiosHeaders();
424
430
  headers["Accept"] = "application/json";
425
- return this.axiosInstance.get(this.baseURL + "data_filter_list/" + id + "/", {headers: headers, responseType:"json"}).then((response) => {
431
+ let params = {limit: limit.toString()}
432
+ return this.axiosInstance.get(this.baseURL + "data_filter_list/" + id + "/", {headers: headers, responseType:"json",}).then((response) => {
426
433
  return response;
427
434
  });
428
435
  }
@@ -553,5 +560,24 @@ export class CurtainWebAPI {
553
560
  headers["Content-Type"] = "application/json"
554
561
  return this.axiosInstance.delete(this.baseURL + "api_key/" + id + "/", {headers: headers, responseType: "json"})
555
562
  }
563
+
564
+ getRandomDataCiteSuffix() {
565
+ let headers = new AxiosHeaders()
566
+ headers["Accept"] = "application/json"
567
+ return this.axiosInstance.get(this.baseURL + "datacite/get_random_suffix/", {headers: headers, responseType: "json"})
568
+ }
569
+
570
+ submitDataCite(data: any) {
571
+ let headers = new AxiosHeaders()
572
+ headers["Accept"] = "application/json"
573
+ headers["Content-Type"] = "application/json"
574
+ return this.axiosInstance.post(this.baseURL + "datacite/", data, {headers: headers, responseType: "json"})
575
+ }
576
+
577
+ getDataCite(id: number) {
578
+ let headers = new AxiosHeaders()
579
+ headers["Accept"] = "application/json"
580
+ return this.axiosInstance.get(this.baseURL + "datacite/" + id + "/", {headers: headers, responseType: "json"})
581
+ }
556
582
  }
557
583