ctxr-cli 0.5.0 → 0.6.0

package/dist/adapter.d.ts

@@ -12,7 +12,6 @@
  * contexture's built-ins use, ready for that loading mechanism once it ships.
  */
 export type { Adapter, AdapterKind, HarnessGenerationAdapter } from './adapters/types.js';
-export type { ForgeAdapter, OpenPullRequestInput, OpenPullRequestResult } from './adapters/forge/types.js';
 import type { Adapter, AdapterKind } from './adapters/types.js';
 export declare function defineAdapter<K extends AdapterKind, A extends Adapter<K>>(adapter: A): A;
 //# sourceMappingURL=adapter.d.ts.map

package/dist/adapter.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"adapter.d.ts","sourceRoot":"","sources":["../src/adapter.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;GAYG;AACH,YAAY,EAAE,OAAO,EAAE,WAAW,EAAE,wBAAwB,EAAE,MAAM,qBAAqB,CAAC;AAE1F,OAAO,KAAK,EAAE,OAAO,EAAE,WAAW,EAAE,MAAM,qBAAqB,CAAC;AAEhE,wBAAgB,aAAa,CAAC,CAAC,SAAS,WAAW,EAAE,CAAC,SAAS,OAAO,CAAC,CAAC,CAAC,EAAE,OAAO,EAAE,CAAC,GAAG,CAAC,CAExF"}

package/dist/adapter.js.map

@@ -1 +1 @@
-{"version":3,"file":"adapter.js","sourceRoot":"","sources":["../src/adapter.ts"],"names":[],"mappings":"AAkBA,MAAM,UAAU,aAAa,CAA8C,OAAU;IACnF,OAAO,OAAO,CAAC;AACjB,CAAC"}
+{"version":3,"file":"adapter.js","sourceRoot":"","sources":["../src/adapter.ts"],"names":[],"mappings":"AAiBA,MAAM,UAAU,aAAa,CAA8C,OAAU;IACnF,OAAO,OAAO,CAAC;AACjB,CAAC"}

package/dist/adapters/builtin/index.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../../src/adapters/builtin/index.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,aAAa,CAAC;AAE3C;;;GAGG;AACH,eAAO,MAAM,gBAAgB,EAAE,SAAS,OAAO,EAAmD,CAAC"}
+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../../src/adapters/builtin/index.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,aAAa,CAAC;AAE3C;;;GAGG;AACH,eAAO,MAAM,gBAAgB,EAAE,SAAS,OAAO,EAA0D,CAAC"}

package/dist/adapters/builtin/index.js

@@ -1,8 +1,8 @@
-import { githubForgeAdapter } from '../forge/github.js';
 import { claudeCodeHarnessAdapter } from '../harness/claude-code.js';
+import { hermesAgentHarnessAdapter } from '../harness/hermes-agent.js';
 /**
  * Every adapter shipped with contexture itself, resolved by (kind, id)
  * against contexture.yaml's declared list.
  */
-export const BUILTIN_ADAPTERS = [githubForgeAdapter, claudeCodeHarnessAdapter];
+export const BUILTIN_ADAPTERS = [claudeCodeHarnessAdapter, hermesAgentHarnessAdapter];
 //# sourceMappingURL=index.js.map

package/dist/adapters/builtin/index.js.map

@@ -1 +1 @@
-{"version":3,"file":"index.js","sourceRoot":"","sources":["../../../src/adapters/builtin/index.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,kBAAkB,EAAE,MAAM,oBAAoB,CAAC;AACxD,OAAO,EAAE,wBAAwB,EAAE,MAAM,2BAA2B,CAAC;AAGrE;;;GAGG;AACH,MAAM,CAAC,MAAM,gBAAgB,GAAuB,CAAC,kBAAkB,EAAE,wBAAwB,CAAC,CAAC"}
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../../src/adapters/builtin/index.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,wBAAwB,EAAE,MAAM,2BAA2B,CAAC;AACrE,OAAO,EAAE,yBAAyB,EAAE,MAAM,4BAA4B,CAAC;AAGvE;;;GAGG;AACH,MAAM,CAAC,MAAM,gBAAgB,GAAuB,CAAC,wBAAwB,EAAE,yBAAyB,CAAC,CAAC"}

package/dist/adapters/harness/claude-code.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"claude-code.d.ts","sourceRoot":"","sources":["../../../src/adapters/harness/claude-code.ts"],"names":[],"mappings":"AACA,OAAO,KAAK,EAAE,wBAAwB,EAAyB,MAAM,aAAa,CAAC;AAYnF,eAAO,MAAM,wBAAwB,EAAE,wBAwEtC,CAAC"}
+{"version":3,"file":"claude-code.d.ts","sourceRoot":"","sources":["../../../src/adapters/harness/claude-code.ts"],"names":[],"mappings":"AACA,OAAO,KAAK,EAAE,wBAAwB,EAAyB,MAAM,aAAa,CAAC;AAYnF,eAAO,MAAM,wBAAwB,EAAE,wBAwFtC,CAAC"}

package/dist/adapters/harness/claude-code.js

@@ -10,8 +10,9 @@ const HOOK_TARGET_PATH = '.claude/hooks/claude-code-write-gate.sh';
 export const claudeCodeHarnessAdapter = {
     id: 'claude-code',
     kind: 'harness-generation',
-    interfaceVersion: 1,
+    interfaceVersion: 2,
     entryFileName: 'CLAUDE.md',
+    skillsDir: '.claude/skills/',
     render(agentsMdPath) {
         return [`@${path.basename(agentsMdPath)}`];
     },
@@ -22,9 +23,10 @@ export const claudeCodeHarnessAdapter = {
             targetPath: HOOK_TARGET_PATH,
         },
         /**
-         * task 8.4 (revised): deny raw `git push`/`git commit`, and deny an
-         * edit anywhere under the store root except the active session
-         * worktree via a PreToolUse hook rather than a permission rule.
+         * task 8.4 (revised): deny an edit anywhere under the store root except
+         * the active session worktree, via a PreToolUse hook rather than a
+         * permission rule. This emits no `Bash(git …)` deny — see
+         * `retiredRules` for why the two that used to live here are gone.
          *
          * A permission rule cannot express that carve-out: Claude Code
          * evaluates deny before allow with no exception mechanism ("a deny rule
@@ -40,26 +42,40 @@ export const claudeCodeHarnessAdapter = {
          * pre-commit path allowlist can never disagree about what counts as an
          * escape.
          */
-        render({ root }) {
+        render({ mainRoot }) {
             return {
-                permissions: {
-                    deny: ['Bash(git push:*)', 'Bash(git commit:*)'],
-                },
                 hooks: {
                     PreToolUse: [
                         {
                             matcher: 'Edit|Write|NotebookEdit',
-                            hooks: [{ type: 'command', command: path.join(root, HOOK_TARGET_PATH) }],
+                            // Anchored at the main worktree, never the checkout currently
+                            // running the generator (stabilize-write-gate-hook-path) — a
+                            // session worktree is deleted once its own session lands, and
+                            // a hook command that no longer resolves fails open silently.
+                            hooks: [{ type: 'command', command: path.join(mainRoot, HOOK_TARGET_PATH) }],
                         },
                     ],
                 },
             };
         },
         /**
-         * The deny/allow pair a previous release emitted for the same
-         * `{root, worktreesPath}` — reconstructed here (not read back off disk)
-         * so `mergeJsonArrayLists` can remove it by exact match, repairing a
-         * store whose config was generated before this fix.
+         * Rules previous releases emitted that `render()` no longer does —
+         * reconstructed here (not read back off disk) so `mergeJsonArrayLists`
+         * can remove each by exact match, converging a store generated by an
+         * earlier version. Two generations are retired here:
+         *
+         * 1. The Write/Edit deny/allow pair, replaced by the PreToolUse hook
+         *    above for the carve-out reason documented on `render()`.
+         * 2. `Bash(git push:*)` / `Bash(git commit:*)`. These existed to force
+         *    every commit and push through `ctxr session submit`, which ran git
+         *    as its own subprocess and so was never matched by a `Bash(git …)`
+         *    rule. That command is gone (session-keeps-only-what-git-cannot-do);
+         *    `ctxr-submit` now instructs `git commit` and `git push` directly,
+         *    which these rules would deny — a config forbidding the very skill
+         *    it ships alongside. The guarantee they were credited with is not
+         *    lost: the pre-push hook refuses a push to the default branch
+         *    whatever runs it, and that hook, not a permission rule, is the
+         *    mechanism write-lifecycle actually names.
          */
         retiredRules({ root, worktreesPath }) {
             const absRoot = root.replace(/^\/+/, '').replace(/\/+$/, '');
@@ -68,7 +84,7 @@ export const claudeCodeHarnessAdapter = {
             const worktreeGlob = `//${absRoot}/${worktreesSegment}/**`;
             return {
                 permissions: {
-                    deny: [`Write(${rootGlob})`, `Edit(${rootGlob})`],
+                    deny: [`Write(${rootGlob})`, `Edit(${rootGlob})`, 'Bash(git push:*)', 'Bash(git commit:*)'],
                     allow: [`Write(${worktreeGlob})`, `Edit(${worktreeGlob})`],
                 },
             };

package/dist/adapters/harness/claude-code.js.map

@@ -1 +1 @@
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+{"version":3,"file":"claude-code.js","sourceRoot":"","sources":["../../../src/adapters/harness/claude-code.ts"],"names":[],"mappings":"AAAA,OAAO,IAAI,MAAM,WAAW,CAAC;AAG7B;;;;;GAKG;AAEH,yEAAyE;AACzE,MAAM,gBAAgB,GAAG,yCAAyC,CAAC;AAEnE,MAAM,CAAC,MAAM,wBAAwB,GAA6B;IAChE,EAAE,EAAE,aAAa;IACjB,IAAI,EAAE,oBAAoB;IAC1B,gBAAgB,EAAE,CAAC;IACnB,aAAa,EAAE,WAAW;IAC1B,SAAS,EAAE,iBAAiB;IAE5B,MAAM,CAAC,YAAoB;QACzB,OAAO,CAAC,IAAI,IAAI,CAAC,QAAQ,CAAC,YAAY,CAAC,EAAE,CAAC,CAAC;IAC7C,CAAC;IAED,gBAAgB,EAAE;QAChB,IAAI,EAAE,uBAAuB;QAE7B,QAAQ,EAAE;YACR,gBAAgB,EAAE,2BAA2B;YAC7C,UAAU,EAAE,gBAAgB;SAC7B;QAED;;;;;;;;;;;;;;;;;;;WAmBG;QACH,MAAM,CAAC,EAAE,QAAQ,EAAyB;YACxC,OAAO;gBACL,KAAK,EAAE;oBACL,UAAU,EAAE;wBACV;4BACE,OAAO,EAAE,yBAAyB;4BAClC,8DAA8D;4BAC9D,6DAA6D;4BAC7D,8DAA8D;4BAC9D,8DAA8D;4BAC9D,KAAK,EAAE,CAAC,EAAE,IAAI,EAAE,SAAS,EAAE,OAAO,EAAE,IAAI,CAAC,IAAI,CAAC,QAAQ,EAAE,gBAAgB,CAAC,EAAE,CAAC;yBAC7E;qBACF;iBACF;aACF,CAAC;QACJ,CAAC;QAED;;;;;;;;;;;;;;;;;;WAkBG;QACH,YAAY,CAAC,EAAE,IAAI,EAAE,aAAa,EAAyB;YACzD,MAAM,OAAO,GAAG,IAAI,CAAC,OAAO,CAAC,MAAM,EAAE,EAAE,CAAC,CAAC,OAAO,CAAC,MAAM,EAAE,EAAE,CAAC,CAAC;YAC7D,MAAM,gBAAgB,GAAG,aAAa,CAAC,OAAO,CAAC,YAAY,EAAE,EAAE,CAAC,CAAC;YACjE,MAAM,QAAQ,GAAG,KAAK,OAAO,KAAK,CAAC;YACnC,MAAM,YAAY,GAAG,KAAK,OAAO,IAAI,gBAAgB,KAAK,CAAC;YAC3D,OAAO;gBACL,WAAW,EAAE;oBACX,IAAI,EAAE,CAAC,SAAS,QAAQ,GAAG,EAAE,QAAQ,QAAQ,GAAG,EAAE,kBAAkB,EAAE,oBAAoB,CAAC;oBAC3F,KAAK,EAAE,CAAC,SAAS,YAAY,GAAG,EAAE,QAAQ,YAAY,GAAG,CAAC;iBAC3D;aACF,CAAC;QACJ,CAAC;KACF;CACF,CAAC"}

package/dist/adapters/harness/hermes-agent.d.ts

@@ -0,0 +1,9 @@
+import type { HarnessGenerationAdapter } from '../types.js';
+/**
+ * A skills-only harness-generation adapter (vendored-craft-skills spec):
+ * Hermes reads the canonical entry document directly, so this adapter
+ * declares no entry file and no permission config — its only contribution
+ * is `skillsDir`, bridged to the store's configured skills path.
+ */
+export declare const hermesAgentHarnessAdapter: HarnessGenerationAdapter;
+//# sourceMappingURL=hermes-agent.d.ts.map

package/dist/adapters/harness/hermes-agent.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"hermes-agent.d.ts","sourceRoot":"","sources":["../../../src/adapters/harness/hermes-agent.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,wBAAwB,EAAE,MAAM,aAAa,CAAC;AAE5D;;;;;GAKG;AACH,eAAO,MAAM,yBAAyB,EAAE,wBAKvC,CAAC"}

package/dist/adapters/harness/hermes-agent.js

@@ -0,0 +1,13 @@
+/**
+ * A skills-only harness-generation adapter (vendored-craft-skills spec):
+ * Hermes reads the canonical entry document directly, so this adapter
+ * declares no entry file and no permission config — its only contribution
+ * is `skillsDir`, bridged to the store's configured skills path.
+ */
+export const hermesAgentHarnessAdapter = {
+    id: 'hermes-agent',
+    kind: 'harness-generation',
+    interfaceVersion: 2,
+    skillsDir: '.hermes/skills/',
+};
+//# sourceMappingURL=hermes-agent.js.map

package/dist/adapters/harness/hermes-agent.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"hermes-agent.js","sourceRoot":"","sources":["../../../src/adapters/harness/hermes-agent.ts"],"names":[],"mappings":"AAEA;;;;;GAKG;AACH,MAAM,CAAC,MAAM,yBAAyB,GAA6B;IACjE,EAAE,EAAE,cAAc;IAClB,IAAI,EAAE,oBAAoB;IAC1B,gBAAgB,EAAE,CAAC;IACnB,SAAS,EAAE,iBAAiB;CAC7B,CAAC"}

package/dist/adapters/types.d.ts

@@ -1,14 +1,13 @@
 /**
- * Reserved shape for the adapters capability's single contract, covering the
- * two v1 kinds — harness-generation, forge (a search kind is deferred to v2
- * alongside the visibility-field naming decision).
- *
- * Phase 2.5 ships a concrete GitHub forge adapter six phases before Phase 8.2
- * formally defines discovery. Reserving this shape now means Phase 2 builds
- * against it instead of inventing its own registration mechanism, and
- * Phase 8 extends this rather than retrofitting Phase 2's adapter into it.
+ * Reserved shape for the adapters capability's single contract. `forge`
+ * (GitHub pull-request read/merge) was removed once its only consumers,
+ * `ctxr session submit`/`land`, were replaced by the `ctxr-submit`/`ctxr-land`
+ * skills driving `git`/`gh` directly (session-keeps-only-what-git-cannot-do).
+ * A search kind is deferred to v2 alongside the visibility-field naming
+ * decision — the registration mechanism stays kind-generic for that reason,
+ * even with one kind currently registered.
  */
-export type AdapterKind = 'harness-generation' | 'forge';
+export type AdapterKind = 'harness-generation';
 export interface Adapter<K extends AdapterKind = AdapterKind> {
     kind: K;
     id: string;
@@ -24,28 +23,51 @@ export declare const SUPPORTED_ADAPTER_INTERFACE_VERSION: Record<AdapterKind, nu
 /**
  * A harness-generation adapter produces one harness-specific entry file
  * containing nothing beyond an import of AGENTS.md plus that harness's own
- * extras (harness-portability spec). `render()` returns exactly the lines
- * placed inside contexture's managed fenced region in that file — never the
- * whole file, so a hand-authored preamble outside the fence survives.
+ * extras (harness-portability spec), when it declares one at all —
+ * `entryFileName`/`render` are optional at v2 for a harness that reads the
+ * canonical entry document directly. `render()`, when present, returns
+ * exactly the lines placed inside contexture's managed fenced region in
+ * that file — never the whole file, so a hand-authored preamble outside the
+ * fence survives.
  */
 /**
- * `root` is the store's absolute filesystem path. Permission-rule paths are
- * anchored there (not written cwd-relative) because a session may be
+ * `root` is the checkout currently being reconciled — the store's absolute
+ * filesystem path, typically a session worktree. Permission-rule paths that
+ * describe the store's own tree (e.g. the worktree-scoping glob) are
+ * anchored there, not written cwd-relative, because a session may be
  * launched with its cwd already inside a worktree rather than at the store
  * root — a cwd-relative rule would then resolve against the wrong directory.
+ *
+ * `mainRoot` (stabilize-write-gate-hook-path) is the store's main/canonical
+ * worktree — the one persistent checkout that outlives any session worktree.
+ * Use this, never `root`, for any absolute path an enforcement primitive
+ * itself is invoked by (a hook command): `root` is deleted the moment the
+ * session worktree that generated it lands, so a path anchored there goes
+ * stale as soon as that happens.
+ *
  * `binPath` is this installation's own resolved CLI entrypoint, for a
  * harness whose config needs to shell out back to `ctxr` (a generated hook
  * script). See claude-code.ts's permissionConfig for the concrete case.
  */
 export interface PermissionConfigInput {
     root: string;
+    mainRoot: string;
     worktreesPath: string;
     binPath: string;
 }
 export interface HarnessGenerationAdapter extends Adapter<'harness-generation'> {
-    /** The harness-specific file this adapter writes, relative to the store root (e.g. "CLAUDE.md"). */
-    entryFileName: string;
-    render(agentsMdPath: string): string[];
+    /**
+     * vendored-craft-skills spec: the store-relative directory this harness
+     * reads skills from (e.g. ".claude/skills/"). Contexture bridges this
+     * directory to the store's configured (canonical) skills path rather than
+     * writing skills here directly — never derived by inspecting the host
+     * machine, always the adapter's declaration (or a store's override, see
+     * AdapterDeclarationSchema.skills_dir).
+     */
+    skillsDir: string;
+    /** The harness-specific file this adapter writes, relative to the store root (e.g. "CLAUDE.md"). Omit for a harness that reads AGENTS.md directly — no entry file is generated for it. */
+    entryFileName?: string;
+    render?(agentsMdPath: string): string[];
     /** Optional: harnesses that support a structured permission config (task 8.4). */
     permissionConfig?: {
         /** Relative to the store root (e.g. ".claude/settings.json"). */
@@ -75,6 +97,5 @@ export interface HarnessGenerationAdapter extends Adapter<'harness-generation'>
  */
 export interface AdapterForKind {
     'harness-generation': HarnessGenerationAdapter;
-    forge: import('./forge/types.js').ForgeAdapter;
 }
 //# sourceMappingURL=types.d.ts.map

package/dist/adapters/types.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"types.d.ts","sourceRoot":"","sources":["../../src/adapters/types.ts"],"names":[],"mappings":"AAAA;;;;;;;;GAQG;AACH,MAAM,MAAM,WAAW,GAAG,oBAAoB,CAAC;AAE/C,MAAM,WAAW,OAAO,CAAC,CAAC,SAAS,WAAW,GAAG,WAAW;IAC1D,IAAI,EAAE,CAAC,CAAC;IACR,EAAE,EAAE,MAAM,CAAC;IACX,gBAAgB,EAAE,MAAM,CAAC;CAC1B;AAED;;;;;GAKG;AACH,eAAO,MAAM,mCAAmC,EAAE,MAAM,CAAC,WAAW,EAAE,MAAM,CAI3E,CAAC;AAEF;;;;;;;;;GASG;AACH;;;;;;;;;;;;;;;;;;GAkBG;AACH,MAAM,WAAW,qBAAqB;IACpC,IAAI,EAAE,MAAM,CAAC;IACb,QAAQ,EAAE,MAAM,CAAC;IACjB,aAAa,EAAE,MAAM,CAAC;IACtB,OAAO,EAAE,MAAM,CAAC;CACjB;AAED,MAAM,WAAW,wBAAyB,SAAQ,OAAO,CAAC,oBAAoB,CAAC;IAC7E;;;;;;;OAOG;IACH,SAAS,EAAE,MAAM,CAAC;IAClB,0LAA0L;IAC1L,aAAa,CAAC,EAAE,MAAM,CAAC;IACvB,MAAM,CAAC,CAAC,YAAY,EAAE,MAAM,GAAG,MAAM,EAAE,CAAC;IACxC,kFAAkF;IAClF,gBAAgB,CAAC,EAAE;QACjB,iEAAiE;QACjE,IAAI,EAAE,MAAM,CAAC;QACb,MAAM,CAAC,KAAK,EAAE,qBAAqB,GAAG,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,CAAC;QAC9D;;;;;;WAMG;QACH,YAAY,CAAC,KAAK,EAAE,qBAAqB,GAAG,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,CAAC;QACpE,0GAA0G;QAC1G,QAAQ,CAAC,EAAE;YACT,uCAAuC;YACvC,gBAAgB,EAAE,MAAM,CAAC;YACzB,2EAA2E;YAC3E,UAAU,EAAE,MAAM,CAAC;SACpB,CAAC;KACH,CAAC;CACH;AAED;;;;GAIG;AACH,MAAM,WAAW,cAAc;IAC7B,oBAAoB,EAAE,wBAAwB,CAAC;CAChD"}

package/dist/adapters/types.js

@@ -5,8 +5,8 @@
  * these is a deliberate, breaking change to that kind's interface.
  */
 export const SUPPORTED_ADAPTER_INTERFACE_VERSION = {
-    'harness-generation': 1,
-    // session-submit-and-land spec (D5): pullRequest/mergePullRequest joined the forge interface at v2.
-    forge: 2,
+    // vendored-craft-skills spec: skillsDir joined the harness-generation interface at v2,
+    // and entryFileName/render became optional (a skills-only adapter needs neither).
+    'harness-generation': 2,
 };
 //# sourceMappingURL=types.js.map

package/dist/adapters/types.js.map

@@ -1 +1 @@
-{"version":3,"file":"types.js","sourceRoot":"","sources":["../../src/adapters/types.ts"],"names":[],"mappings":"AAkBA;;;;;GAKG;AACH,MAAM,CAAC,MAAM,mCAAmC,GAAgC;IAC9E,oBAAoB,EAAE,CAAC;IACvB,oGAAoG;IACpG,KAAK,EAAE,CAAC;CACT,CAAC"}
+{"version":3,"file":"types.js","sourceRoot":"","sources":["../../src/adapters/types.ts"],"names":[],"mappings":"AAiBA;;;;;GAKG;AACH,MAAM,CAAC,MAAM,mCAAmC,GAAgC;IAC9E,uFAAuF;IACvF,kFAAkF;IAClF,oBAAoB,EAAE,CAAC;CACxB,CAAC"}

package/dist/commands/adapters-generate.d.ts

@@ -1,4 +1,6 @@
 import type { CommandOutcome, CommandRequires } from '../core/command.js';
+import type { RunEnv } from '../core/env.js';
+import type { GitRunner } from '../core/git/exec.js';
 import type { Store } from '../core/store.js';
 export declare const requires: CommandRequires;
 export interface AdaptersGenerateFileResult {
@@ -16,6 +18,6 @@ export interface AdaptersGenerateData {
  * own entry file) never collide, because each owns a distinctly-named fence.
  */
 /** The generation itself, shared with `ctxr update`. */
-export declare function generateAdapterOutputs(store: Store): Promise<AdaptersGenerateFileResult[]>;
-export declare function execute(store: Store): Promise<CommandOutcome<AdaptersGenerateData>>;
+export declare function generateAdapterOutputs(git: GitRunner, store: Store): Promise<AdaptersGenerateFileResult[]>;
+export declare function execute(env: RunEnv, store: Store): Promise<CommandOutcome<AdaptersGenerateData>>;
 //# sourceMappingURL=adapters-generate.d.ts.map

package/dist/commands/adapters-generate.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"adapters-generate.d.ts","sourceRoot":"","sources":["../../src/commands/adapters-generate.ts"],"names":[],"mappings":"AACA,OAAO,KAAK,EAAE,cAAc,EAAE,eAAe,EAAE,MAAM,oBAAoB,CAAC;AAG1E,OAAO,KAAK,EAAE,MAAM,EAAE,MAAM,gBAAgB,CAAC;AAG7C,OAAO,KAAK,EAAE,SAAS,EAAE,MAAM,qBAAqB,CAAC;AAKrD,OAAO,KAAK,EAAE,KAAK,EAAE,MAAM,kBAAkB,CAAC;AAE9C,eAAO,MAAM,QAAQ,EAAE,eAAuC,CAAC;AAE/D,MAAM,WAAW,0BAA0B;IACzC,IAAI,EAAE,MAAM,CAAC;IACb,OAAO,EAAE,OAAO,CAAC;CAClB;AAED,MAAM,WAAW,oBAAoB;IACnC,KAAK,EAAE,0BAA0B,EAAE,CAAC;CACrC;AAED;;;;;;GAMG;AACH,wDAAwD;AACxD,wBAAsB,sBAAsB,CAAC,GAAG,EAAE,SAAS,EAAE,KAAK,EAAE,KAAK,GAAG,OAAO,CAAC,0BAA0B,EAAE,CAAC,CAkDhH;AAED,wBAAsB,OAAO,CAAC,GAAG,EAAE,MAAM,EAAE,KAAK,EAAE,KAAK,GAAG,OAAO,CAAC,cAAc,CAAC,oBAAoB,CAAC,CAAC,CAWtG"}

package/dist/commands/adapters-generate.js

@@ -3,6 +3,7 @@ import { configuredAdapters } from '../adapters/registry.js';
 import { agentsMdPath } from '../core/agents-doc.js';
 import { ExitCode } from '../core/exit-codes.js';
 import { upsertFencedRegionInFile } from '../core/fs/fenced-region.js';
+import { mainWorktreePath } from '../core/git/worktree.js';
 import { installTemplatedHookScript, resolveOwnBinPath } from '../core/hooks.js';
 import { mergeJsonArrayLists } from '../core/json-config-merge.js';
 import { harnessEntryFence } from '../core/markers.js';
@@ -15,15 +16,22 @@ export const requires = { store: 'required' };
  * own entry file) never collide, because each owns a distinctly-named fence.
  */
 /** The generation itself, shared with `ctxr update`. */
-export async function generateAdapterOutputs(store) {
+export async function generateAdapterOutputs(git, store) {
     const files = [];
+    // Resolved once per run, not per adapter: every adapter's permission
+    // config that needs a stable absolute path (stabilize-write-gate-hook-path)
+    // anchors it here, regardless of which checkout is running this generator.
+    const mainRoot = await mainWorktreePath(git, store.root);
     for (const adapter of configuredAdapters(store.config, 'harness-generation')) {
-        const entryPath = path.join(store.root, adapter.entryFileName);
-        const { changed } = await upsertFencedRegionInFile(entryPath, harnessEntryFence(adapter.id), adapter.render(agentsMdPath(store.root)));
-        files.push({ path: adapter.entryFileName, changed });
+        if (adapter.entryFileName !== undefined && adapter.render !== undefined) {
+            const entryPath = path.join(store.root, adapter.entryFileName);
+            const { changed } = await upsertFencedRegionInFile(entryPath, harnessEntryFence(adapter.id), adapter.render(agentsMdPath(store.root)));
+            files.push({ path: adapter.entryFileName, changed });
+        }
         if (adapter.permissionConfig) {
             const input = {
                 root: store.root,
+                mainRoot,
                 worktreesPath: store.config.session.worktrees_path,
                 binPath: resolveOwnBinPath(),
             };
@@ -44,8 +52,8 @@ export async function generateAdapterOutputs(store) {
     }
     return files;
 }
-export async function execute(store) {
-    const files = await generateAdapterOutputs(store);
+export async function execute(env, store) {
+    const files = await generateAdapterOutputs(env.git, store);
     const changedCount = files.filter((f) => f.changed).length;
     return {
         exitCode: ExitCode.Ok,

package/dist/commands/adapters-generate.js.map

@@ -1 +1 @@
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package/dist/commands/archive.d.ts

@@ -16,8 +16,10 @@ export interface ArchiveData {
  * read+delete+rewrite — so the note's frontmatter (including its
  * visibility field) is untouched by construction, and `git log --follow`
  * on the new path returns its full prior history. The destination lives
- * under `organize.archive_path`, independent of taxonomy layer names, so
- * this works identically under any configured taxonomy (task 7.1).
+ * under `organize.archive_destination`, independent of taxonomy layer names,
+ * so this works identically under any configured taxonomy (task 7.1). A
+ * shipped profile may seed that value at init
+ * (archive-destination-from-taxonomy), but nothing here reads the taxonomy.
  *
  * Wikilinks resolve by filename stem (context-retrieval spec), and archive
  * never changes a note's filename — only its directory — so no other

package/dist/commands/archive.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"archive.d.ts","sourceRoot":"","sources":["../../src/commands/archive.ts"],"names":[],"mappings":"AAGA,OAAO,KAAK,EAAE,cAAc,EAAE,eAAe,EAAE,MAAM,oBAAoB,CAAC;AAC1E,OAAO,KAAK,EAAE,MAAM,EAAE,MAAM,gBAAgB,CAAC;AAM7C,OAAO,KAAK,EAAE,KAAK,EAAE,MAAM,kBAAkB,CAAC;AAE9C,eAAO,MAAM,QAAQ,EAAE,eAAuC,CAAC;AAE/D,MAAM,WAAW,YAAY;IAC3B,IAAI,EAAE,MAAM,CAAC;CACd;AAED,MAAM,WAAW,WAAW;IAC1B,IAAI,EAAE,MAAM,CAAC;IACb,OAAO,EAAE,MAAM,CAAC;IAChB,YAAY,EAAE,MAAM,EAAE,CAAC;CACxB;AAOD;;;;;;;;;;;;;GAaG;AACH,wBAAsB,OAAO,CAAC,GAAG,EAAE,MAAM,EAAE,KAAK,EAAE,KAAK,EAAE,KAAK,EAAE,YAAY,GAAG,OAAO,CAAC,cAAc,CAAC,WAAW,CAAC,CAAC,CA0ClH"}
+{"version":3,"file":"archive.d.ts","sourceRoot":"","sources":["../../src/commands/archive.ts"],"names":[],"mappings":"AAGA,OAAO,KAAK,EAAE,cAAc,EAAE,eAAe,EAAE,MAAM,oBAAoB,CAAC;AAC1E,OAAO,KAAK,EAAE,MAAM,EAAE,MAAM,gBAAgB,CAAC;AAM7C,OAAO,KAAK,EAAE,KAAK,EAAE,MAAM,kBAAkB,CAAC;AAE9C,eAAO,MAAM,QAAQ,EAAE,eAAuC,CAAC;AAE/D,MAAM,WAAW,YAAY;IAC3B,IAAI,EAAE,MAAM,CAAC;CACd;AAED,MAAM,WAAW,WAAW;IAC1B,IAAI,EAAE,MAAM,CAAC;IACb,OAAO,EAAE,MAAM,CAAC;IAChB,YAAY,EAAE,MAAM,EAAE,CAAC;CACxB;AAOD;;;;;;;;;;;;;;;GAeG;AACH,wBAAsB,OAAO,CAAC,GAAG,EAAE,MAAM,EAAE,KAAK,EAAE,KAAK,EAAE,KAAK,EAAE,YAAY,GAAG,OAAO,CAAC,cAAc,CAAC,WAAW,CAAC,CAAC,CA0ClH"}

package/dist/commands/archive.js

@@ -17,8 +17,10 @@ function toStoreRelativePath(env, store, givenPath) {
  * read+delete+rewrite — so the note's frontmatter (including its
  * visibility field) is untouched by construction, and `git log --follow`
  * on the new path returns its full prior history. The destination lives
- * under `organize.archive_path`, independent of taxonomy layer names, so
- * this works identically under any configured taxonomy (task 7.1).
+ * under `organize.archive_destination`, independent of taxonomy layer names,
+ * so this works identically under any configured taxonomy (task 7.1). A
+ * shipped profile may seed that value at init
+ * (archive-destination-from-taxonomy), but nothing here reads the taxonomy.
  *
  * Wikilinks resolve by filename stem (context-retrieval spec), and archive
  * never changes a note's filename — only its directory — so no other
@@ -32,7 +34,7 @@ export async function execute(env, store, flags) {
         throw new NoteNotFoundError(relativePath);
     const stem = path.basename(relativePath, '.md');
     const newRelativePath = path
-        .join(store.config.organize.archive_path, path.basename(relativePath))
+        .join(store.config.organize.archive_destination, path.basename(relativePath))
         .split(path.sep)
         .join('/');
     const newAbsolutePath = path.join(store.root, newRelativePath);

package/dist/commands/archive.js.map

@@ -1 +1 @@
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+{"version":3,"file":"archive.js","sourceRoot":"","sources":["../../src/commands/archive.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,UAAU,EAAE,MAAM,SAAS,CAAC;AACrC,OAAO,EAAE,KAAK,EAAE,MAAM,kBAAkB,CAAC;AACzC,OAAO,IAAI,MAAM,WAAW,CAAC;AAG7B,OAAO,EAAE,6BAA6B,EAAE,iBAAiB,EAAE,mBAAmB,EAAE,MAAM,mBAAmB,CAAC;AAC1G,OAAO,EAAE,QAAQ,EAAE,MAAM,uBAAuB,CAAC;AACjD,OAAO,EAAE,SAAS,EAAE,QAAQ,EAAE,MAAM,qBAAqB,CAAC;AAC1D,OAAO,EAAE,kBAAkB,EAAE,MAAM,wBAAwB,CAAC;AAC5D,OAAO,EAAE,SAAS,EAAE,MAAM,uBAAuB,CAAC;AAGlD,MAAM,CAAC,MAAM,QAAQ,GAAoB,EAAE,KAAK,EAAE,UAAU,EAAE,CAAC;AAY/D,SAAS,mBAAmB,CAAC,GAAW,EAAE,KAAY,EAAE,SAAiB;IACvE,MAAM,QAAQ,GAAG,IAAI,CAAC,UAAU,CAAC,SAAS,CAAC,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC,IAAI,CAAC,OAAO,CAAC,GAAG,CAAC,GAAG,EAAE,SAAS,CAAC,CAAC;IAC3F,OAAO,IAAI,CAAC,QAAQ,CAAC,KAAK,CAAC,IAAI,EAAE,QAAQ,CAAC,CAAC,KAAK,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;AACvE,CAAC;AAED;;;;;;;;;;;;;;;GAeG;AACH,MAAM,CAAC,KAAK,UAAU,OAAO,CAAC,GAAW,EAAE,KAAY,EAAE,KAAmB;IAC1E,MAAM,YAAY,GAAG,mBAAmB,CAAC,GAAG,EAAE,KAAK,EAAE,KAAK,CAAC,IAAI,CAAC,CAAC;IACjE,MAAM,YAAY,GAAG,IAAI,CAAC,IAAI,CAAC,KAAK,CAAC,IAAI,EAAE,YAAY,CAAC,CAAC;IACzD,IAAI,CAAC,UAAU,CAAC,YAAY,CAAC;QAAE,MAAM,IAAI,iBAAiB,CAAC,YAAY,CAAC,CAAC;IAEzE,MAAM,IAAI,GAAG,IAAI,CAAC,QAAQ,CAAC,YAAY,EAAE,KAAK,CAAC,CAAC;IAChD,MAAM,eAAe,GAAG,IAAI;SACzB,IAAI,CAAC,KAAK,CAAC,MAAM,CAAC,QAAQ,CAAC,mBAAmB,EAAE,IAAI,CAAC,QAAQ,CAAC,YAAY,CAAC,CAAC;SAC5E,KAAK,CAAC,IAAI,CAAC,GAAG,CAAC;SACf,IAAI,CAAC,GAAG,CAAC,CAAC;IACb,MAAM,eAAe,GAAG,IAAI,CAAC,IAAI,CAAC,KAAK,CAAC,IAAI,EAAE,eAAe,CAAC,CAAC;IAE/D,IAAI,eAAe,KAAK,YAAY,IAAI,UAAU,CAAC,eAAe,CAAC,EAAE,CAAC;QACpE,MAAM,IAAI,6BAA6B,CAAC,eAAe,CAAC,CAAC;IAC3D,CAAC;IAED,MAAM,KAAK,GAAG,MAAM,SAAS,CAAC,KAAK,CAAC,IAAI,EAAE,KAAK,CAAC,MAAM,CAAC,CAAC;IACxD,MAAM,YAAY,GAAG,KAAK;SACvB,MAAM,CAAC,CAAC,IAAI,EAAE,EAAE,CAAC,IAAI,CAAC,IAAI,KAAK,YAAY,CAAC;SAC5C,MAAM,CAAC,CAAC,IAAI,EAAE,EAAE,CAAC,kBAAkB,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC,QAAQ,CAAC,IAAI,CAAC,CAAC;SAC9D,GAAG,CAAC,CAAC,IAAI,EAAE,EAAE,CAAC,IAAI,CAAC,IAAI,CAAC;SACxB,IAAI,EAAE,CAAC;IAEV,IAAI,eAAe,KAAK,YAAY,EAAE,CAAC;QACrC,IAAI,CAAC,CAAC,MAAM,SAAS,CAAC,GAAG,CAAC,GAAG,EAAE,KAAK,CAAC,IAAI,EAAE,YAAY,CAAC,CAAC,EAAE,CAAC;YAC1D,MAAM,IAAI,mBAAmB,CAAC,YAAY,CAAC,CAAC;QAC9C,CAAC;QACD,MAAM,KAAK,CAAC,IAAI,CAAC,OAAO,CAAC,eAAe,CAAC,EAAE,EAAE,SAAS,EAAE,IAAI,EAAE,CAAC,CAAC;QAChE,MAAM,QAAQ,CAAC,GAAG,CAAC,GAAG,EAAE,KAAK,CAAC,IAAI,EAAE,YAAY,EAAE,eAAe,CAAC,CAAC;IACrE,CAAC;IAED,OAAO;QACL,QAAQ,EAAE,QAAQ,CAAC,EAAE;QACrB,IAAI,EAAE,EAAE,IAAI,EAAE,YAAY,EAAE,OAAO,EAAE,eAAe,EAAE,YAAY,EAAE;QACpE,QAAQ,EAAE,EAAE;QACZ,YAAY,EACV,eAAe,KAAK,YAAY;YAC9B,CAAC,CAAC,IAAI,YAAY,wBAAwB;YAC1C,CAAC,CAAC,aAAa,YAAY,SAAS,eAAe,IAAI,YAAY,CAAC,MAAM,GAAG,CAAC,CAAC,CAAC,CAAC,KAAK,YAAY,CAAC,MAAM,sBAAsB,CAAC,CAAC,CAAC,EAAE,GAAG;QAC3I,SAAS,EAAE,KAAK,CAAC,IAAI;QACrB,aAAa,EAAE,KAAK,CAAC,MAAM,CAAC,cAAc;KAC3C,CAAC;AACJ,CAAC"}

package/dist/commands/check.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"check.d.ts","sourceRoot":"","sources":["../../src/commands/check.ts"],"names":[],"mappings":"AACA,OAAO,KAAK,EAAE,cAAc,EAAE,eAAe,EAAE,MAAM,oBAAoB,CAAC;AAC1E,OAAO,KAAK,EAAE,cAAc,EAAE,iBAAiB,EAAE,MAAM,6BAA6B,CAAC;AAErF,OAAO,EAAoB,KAAK,WAAW,EAAE,MAAM,iCAAiC,CAAC;AACrF,OAAO,KAAK,EAAE,MAAM,EAAE,MAAM,gBAAgB,CAAC;AAK7C,OAAO,KAAK,EAAE,KAAK,EAAE,MAAM,kBAAkB,CAAC;AAE9C,eAAO,MAAM,QAAQ,EAAE,eAAuC,CAAC;AAE/D,MAAM,WAAW,UAAU;IACzB,IAAI,EAAE,MAAM,CAAC;IACb,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,IAAI,CAAC,EAAE,OAAO,CAAC;CAChB;AAED,MAAM,WAAW,SAAS;IACxB,IAAI,EAAE,MAAM,CAAC;IACb,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,OAAO,CAAC,EAAE,iBAAiB,CAAC;IAC5B,IAAI,CAAC,EAAE,cAAc,CAAC;IACtB,KAAK,CAAC,EAAE,WAAW,EAAE,CAAC;CACvB;AAaD;;;;;;;;;GASG;AACH,wBAAsB,OAAO,CAAC,GAAG,EAAE,MAAM,EAAE,KAAK,EAAE,KAAK,EAAE,KAAK,EAAE,UAAU,GAAG,OAAO,CAAC,cAAc,CAAC,SAAS,CAAC,CAAC,CA6C9G"}
+{"version":3,"file":"check.d.ts","sourceRoot":"","sources":["../../src/commands/check.ts"],"names":[],"mappings":"AACA,OAAO,KAAK,EAAE,cAAc,EAAE,eAAe,EAAE,MAAM,oBAAoB,CAAC;AAC1E,OAAO,KAAK,EAAE,cAAc,EAAE,iBAAiB,EAAE,MAAM,6BAA6B,CAAC;AAErF,OAAO,EAAoB,KAAK,WAAW,EAAE,MAAM,iCAAiC,CAAC;AACrF,OAAO,KAAK,EAAE,MAAM,EAAE,MAAM,gBAAgB,CAAC;AAK7C,OAAO,KAAK,EAAE,KAAK,EAAE,MAAM,kBAAkB,CAAC;AAE9C,eAAO,MAAM,QAAQ,EAAE,eAAuC,CAAC;AAE/D,MAAM,WAAW,UAAU;IACzB,IAAI,EAAE,MAAM,CAAC;IACb,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,IAAI,CAAC,EAAE,OAAO,CAAC;CAChB;AAED,MAAM,WAAW,SAAS;IACxB,IAAI,EAAE,MAAM,CAAC;IACb,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,OAAO,CAAC,EAAE,iBAAiB,CAAC;IAC5B,IAAI,CAAC,EAAE,cAAc,CAAC;IACtB,KAAK,CAAC,EAAE,WAAW,EAAE,CAAC;CACvB;AAOD;;;;;;;;;GASG;AACH,wBAAsB,OAAO,CAAC,GAAG,EAAE,MAAM,EAAE,KAAK,EAAE,KAAK,EAAE,KAAK,EAAE,UAAU,GAAG,OAAO,CAAC,cAAc,CAAC,SAAS,CAAC,CAAC,CA6C9G"}

package/dist/commands/check.js

@@ -1,15 +1,10 @@
 import path from 'node:path';
-import { evaluateDisclosure } from '../core/disclosure/model.js';
+import { evaluateDisclosure, VERDICT_EXIT_CODE } from '../core/disclosure/model.js';
 import { scanNoteForLeaks } from '../core/disclosure/leak-scan.js';
 import { CheckAudienceRequiredError, NoteNotFoundError } from '../core/errors.js';
 import { ExitCode } from '../core/exit-codes.js';
 import { parseNote } from '../core/notes/parse.js';
 export const requires = { store: 'required' };
-const VERDICT_EXIT_CODE = {
-    allow: ExitCode.Ok,
-    deny: ExitCode.DisclosureDeny,
-    ask: ExitCode.DisclosureAsk,
-};
 function toStoreRelativePath(env, store, givenPath) {
     const absolute = path.isAbsolute(givenPath) ? givenPath : path.resolve(env.cwd, givenPath);
     return path.relative(store.root, absolute).split(path.sep).join('/');

package/dist/commands/check.js.map

@@ -1 +1 @@
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package/dist/commands/init.d.ts

@@ -6,6 +6,8 @@ export interface InitFlags {
     root?: string;
     profile?: string;
     taxonomy?: string;
+    /** Comma-separated harness-generation adapter ids, or "none". Unset means: prompt if interactive, else the default set. */
+    harness?: string;
 }
 export interface InitData {
     root: string;

package/dist/commands/init.d.ts.map

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