ctxr-cli 0.1.0 → 0.2.1

package/dist/commands/init.js

@@ -3,7 +3,7 @@ import { mkdir, readFile } from 'node:fs/promises';
 import path from 'node:path';
 import { parse as parseYaml } from 'yaml';
 import { z } from 'zod';
-import { DEFAULT_ADAPTERS, DEFAULT_ARCHIVE_PATH, DEFAULT_CATALOG_PATH, DEFAULT_CATALOG_SECTION_MAX_BYTES, DEFAULT_CONVENTIONS_PATH, DEFAULT_DERIVED_PATHS, DEFAULT_DIFF_SIZE_CEILING_LINES, DEFAULT_EXCLUDE_PATHS, DEFAULT_HARD_WALLS, DEFAULT_IDENTITY_PATH, DEFAULT_INBOX_PATH, DEFAULT_INTERNAL_AUDIENCES, DEFAULT_PROCEDURES_PATH, DEFAULT_SESSION_BRANCH_PREFIX, DEFAULT_VISIBILITY_CONTEXT, DEFAULT_VISIBILITY_FIELD_KEY, DEFAULT_WORKTREES_PATH, } from '../config/defaults.js';
+import { DEFAULT_ADAPTERS, DEFAULT_ARCHIVE_PATH, DEFAULT_ROLLUP_STALE_DAYS, DEFAULT_CATALOG_PATH, DEFAULT_CATALOG_SECTION_MAX_BYTES, DEFAULT_CONVENTIONS_PATH, DEFAULT_DERIVED_PATHS, DEFAULT_DIFF_SIZE_CEILING_LINES, DEFAULT_EXCLUDE_PATHS, DEFAULT_HARD_WALLS, DEFAULT_IDENTITY_PATH, DEFAULT_INBOX_PATH, DEFAULT_TRACKING_PARAMS, DEFAULT_INTERNAL_AUDIENCES, DEFAULT_PROCEDURES_PATH, DEFAULT_RELATIONS, DEFAULT_GRAPH_SETTINGS, DEFAULT_SESSION_BRANCH_PREFIX, DEFAULT_VISIBILITY_CONTEXT, DEFAULT_VISIBILITY_FIELD_KEY, DEFAULT_WORKTREES_PATH, } from '../config/defaults.js';
 import { configPathFor, readConfig } from '../config/load.js';
 import { renderStoreConfig } from '../config/render.js';
 import { SUPPORTED_SCHEMA_VERSION, TaxonomyLayerSchema } from '../config/schema.js';
@@ -126,15 +126,15 @@ async function runInitCore(env, flags) {
         fields: { visibility: DEFAULT_VISIBILITY_FIELD_KEY },
         visibility: { default_context: DEFAULT_VISIBILITY_CONTEXT, directory_defaults: {}, contexts: {} },
         derived: { paths: [...DEFAULT_DERIVED_PATHS] },
-        retrieval: { exclude_paths: [...DEFAULT_EXCLUDE_PATHS] },
+        retrieval: { exclude_paths: [...DEFAULT_EXCLUDE_PATHS], relations: [...DEFAULT_RELATIONS], graph: { ...DEFAULT_GRAPH_SETTINGS, orphan_exempt_clusters: [] } },
         git: { default_branch: defaultBranch },
         session: { branch_prefix: DEFAULT_SESSION_BRANCH_PREFIX, worktrees_path: DEFAULT_WORKTREES_PATH },
-        write_lifecycle: { diff_size_ceiling_lines: DEFAULT_DIFF_SIZE_CEILING_LINES },
+        write_lifecycle: { diff_size_ceiling_lines: DEFAULT_DIFF_SIZE_CEILING_LINES, writable_paths: [] },
         catalog: { path: DEFAULT_CATALOG_PATH, section_max_bytes: DEFAULT_CATALOG_SECTION_MAX_BYTES },
-        disclosure: { internal_audiences: [...DEFAULT_INTERNAL_AUDIENCES], hard_walls: [...DEFAULT_HARD_WALLS] },
-        ingest: { inbox_path: DEFAULT_INBOX_PATH },
-        organize: { archive_path: DEFAULT_ARCHIVE_PATH },
-        identity: { path: DEFAULT_IDENTITY_PATH },
+        disclosure: { internal_audiences: [...DEFAULT_INTERNAL_AUDIENCES], hard_walls: [...DEFAULT_HARD_WALLS], leak_markers: {} },
+        ingest: { inbox_path: DEFAULT_INBOX_PATH, tracking_params: [...DEFAULT_TRACKING_PARAMS] },
+        organize: { archive_path: DEFAULT_ARCHIVE_PATH, rollup_stale_days: DEFAULT_ROLLUP_STALE_DAYS },
+        identity: { path: DEFAULT_IDENTITY_PATH, files: {}, entry_delimiter: '' },
         harness: { procedures_path: DEFAULT_PROCEDURES_PATH, conventions_path: DEFAULT_CONVENTIONS_PATH },
         adapters: [...DEFAULT_ADAPTERS],
     };

package/dist/commands/init.js.map

@@ -1 +1 @@
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package/dist/commands/rollup-stale.d.ts

@@ -0,0 +1,18 @@
+import type { CommandOutcome, CommandRequires } from '../core/command.js';
+import type { RunEnv } from '../core/env.js';
+import { type StaleRollupEntry } from '../core/rollup.js';
+import type { Store } from '../core/store.js';
+export declare const requires: CommandRequires;
+export interface RollupStaleFlags {
+    for?: string;
+}
+export interface RollupStaleData {
+    stale: StaleRollupEntry[];
+}
+/**
+ * context-organize spec (D4): staleness is computed on demand, never
+ * cached — this command and the `organize.rollup_stale` lint check share
+ * the exact same computation, bounded by the same `organize.rollup_stale_days`.
+ */
+export declare function execute(env: RunEnv, store: Store, flags: RollupStaleFlags): Promise<CommandOutcome<RollupStaleData>>;
+//# sourceMappingURL=rollup-stale.d.ts.map

package/dist/commands/rollup-stale.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"rollup-stale.d.ts","sourceRoot":"","sources":["../../src/commands/rollup-stale.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EAAE,cAAc,EAAE,eAAe,EAAE,MAAM,oBAAoB,CAAC;AAC1E,OAAO,KAAK,EAAE,MAAM,EAAE,MAAM,gBAAgB,CAAC;AAI7C,OAAO,EAAoB,KAAK,gBAAgB,EAAE,MAAM,mBAAmB,CAAC;AAC5E,OAAO,KAAK,EAAE,KAAK,EAAE,MAAM,kBAAkB,CAAC;AAE9C,eAAO,MAAM,QAAQ,EAAE,eAAuC,CAAC;AAE/D,MAAM,WAAW,gBAAgB;IAC/B,GAAG,CAAC,EAAE,MAAM,CAAC;CACd;AAED,MAAM,WAAW,eAAe;IAC9B,KAAK,EAAE,gBAAgB,EAAE,CAAC;CAC3B;AAOD;;;;GAIG;AACH,wBAAsB,OAAO,CAAC,GAAG,EAAE,MAAM,EAAE,KAAK,EAAE,KAAK,EAAE,KAAK,EAAE,gBAAgB,GAAG,OAAO,CAAC,cAAc,CAAC,eAAe,CAAC,CAAC,CAkB1H"}

package/dist/commands/rollup-stale.js

@@ -0,0 +1,35 @@
+import { existsSync } from 'node:fs';
+import path from 'node:path';
+import { NoteNotFoundError } from '../core/errors.js';
+import { ExitCode } from '../core/exit-codes.js';
+import { listNotes } from '../core/notes/list.js';
+import { findStaleRollups } from '../core/rollup.js';
+export const requires = { store: 'required' };
+function toStoreRelativePath(env, store, givenPath) {
+    const absolute = path.isAbsolute(givenPath) ? givenPath : path.resolve(env.cwd, givenPath);
+    return path.relative(store.root, absolute).split(path.sep).join('/');
+}
+/**
+ * context-organize spec (D4): staleness is computed on demand, never
+ * cached — this command and the `organize.rollup_stale` lint check share
+ * the exact same computation, bounded by the same `organize.rollup_stale_days`.
+ */
+export async function execute(env, store, flags) {
+    let entity;
+    if (flags.for) {
+        entity = toStoreRelativePath(env, store, flags.for);
+        if (!existsSync(path.join(store.root, entity)))
+            throw new NoteNotFoundError(entity);
+    }
+    const notes = await listNotes(store.root, store.config);
+    const stale = await findStaleRollups(env.git, store.root, notes, { entity }, store.config.organize.rollup_stale_days);
+    return {
+        exitCode: ExitCode.Ok,
+        data: { stale },
+        findings: [],
+        humanSummary: `${stale.length} stale rollup(s).`,
+        storeRoot: store.root,
+        schemaVersion: store.config.schema_version,
+    };
+}
+//# sourceMappingURL=rollup-stale.js.map

package/dist/commands/rollup-stale.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"rollup-stale.js","sourceRoot":"","sources":["../../src/commands/rollup-stale.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,UAAU,EAAE,MAAM,SAAS,CAAC;AACrC,OAAO,IAAI,MAAM,WAAW,CAAC;AAG7B,OAAO,EAAE,iBAAiB,EAAE,MAAM,mBAAmB,CAAC;AACtD,OAAO,EAAE,QAAQ,EAAE,MAAM,uBAAuB,CAAC;AACjD,OAAO,EAAE,SAAS,EAAE,MAAM,uBAAuB,CAAC;AAClD,OAAO,EAAE,gBAAgB,EAAyB,MAAM,mBAAmB,CAAC;AAG5E,MAAM,CAAC,MAAM,QAAQ,GAAoB,EAAE,KAAK,EAAE,UAAU,EAAE,CAAC;AAU/D,SAAS,mBAAmB,CAAC,GAAW,EAAE,KAAY,EAAE,SAAiB;IACvE,MAAM,QAAQ,GAAG,IAAI,CAAC,UAAU,CAAC,SAAS,CAAC,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC,IAAI,CAAC,OAAO,CAAC,GAAG,CAAC,GAAG,EAAE,SAAS,CAAC,CAAC;IAC3F,OAAO,IAAI,CAAC,QAAQ,CAAC,KAAK,CAAC,IAAI,EAAE,QAAQ,CAAC,CAAC,KAAK,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;AACvE,CAAC;AAED;;;;GAIG;AACH,MAAM,CAAC,KAAK,UAAU,OAAO,CAAC,GAAW,EAAE,KAAY,EAAE,KAAuB;IAC9E,IAAI,MAA0B,CAAC;IAC/B,IAAI,KAAK,CAAC,GAAG,EAAE,CAAC;QACd,MAAM,GAAG,mBAAmB,CAAC,GAAG,EAAE,KAAK,EAAE,KAAK,CAAC,GAAG,CAAC,CAAC;QACpD,IAAI,CAAC,UAAU,CAAC,IAAI,CAAC,IAAI,CAAC,KAAK,CAAC,IAAI,EAAE,MAAM,CAAC,CAAC;YAAE,MAAM,IAAI,iBAAiB,CAAC,MAAM,CAAC,CAAC;IACtF,CAAC;IAED,MAAM,KAAK,GAAG,MAAM,SAAS,CAAC,KAAK,CAAC,IAAI,EAAE,KAAK,CAAC,MAAM,CAAC,CAAC;IACxD,MAAM,KAAK,GAAG,MAAM,gBAAgB,CAAC,GAAG,CAAC,GAAG,EAAE,KAAK,CAAC,IAAI,EAAE,KAAK,EAAE,EAAE,MAAM,EAAE,EAAE,KAAK,CAAC,MAAM,CAAC,QAAQ,CAAC,iBAAiB,CAAC,CAAC;IAEtH,OAAO;QACL,QAAQ,EAAE,QAAQ,CAAC,EAAE;QACrB,IAAI,EAAE,EAAE,KAAK,EAAE;QACf,QAAQ,EAAE,EAAE;QACZ,YAAY,EAAE,GAAG,KAAK,CAAC,MAAM,mBAAmB;QAChD,SAAS,EAAE,KAAK,CAAC,IAAI;QACrB,aAAa,EAAE,KAAK,CAAC,MAAM,CAAC,cAAc;KAC3C,CAAC;AACJ,CAAC"}

package/dist/commands/rollup-write.d.ts

@@ -1,8 +1,9 @@
 import type { CommandOutcome, CommandRequires } from '../core/command.js';
 import type { RunEnv } from '../core/env.js';
+import { ROLLUP_FENCE } from '../core/rollup.js';
 import type { Store } from '../core/store.js';
 export declare const requires: CommandRequires;
-export declare const ROLLUP_FENCE: import("../core/markers.js").Fence;
+export { ROLLUP_FENCE };
 export interface RollupWriteFlags {
     entity: string;
     contentFile: string;
@@ -20,6 +21,13 @@ export interface RollupWriteData {
  * codebase. The rollup text itself is supplied by the caller (an agent
  * that already did the reading and synthesis via `rollup gather`'s
  * candidates) — this command's only job is the deterministic write.
+ *
+ * store-primitives-from-migration-audit spec (D4): a write that actually
+ * changes the fenced content ALSO stamps `rolled_up:` with the current
+ * time — recording "when this synthesis was last genuinely produced," the
+ * baseline `rollup stale` compares backlinks against. A true no-op (content
+ * byte-identical) stamps nothing, so re-confirming unchanged content never
+ * resets the clock and the file stays byte-identical across runs.
  */
 export declare function execute(env: RunEnv, store: Store, flags: RollupWriteFlags): Promise<CommandOutcome<RollupWriteData>>;
 //# sourceMappingURL=rollup-write.d.ts.map

package/dist/commands/rollup-write.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"rollup-write.d.ts","sourceRoot":"","sources":["../../src/commands/rollup-write.ts"],"names":[],"mappings":"AAGA,OAAO,KAAK,EAAE,cAAc,EAAE,eAAe,EAAE,MAAM,oBAAoB,CAAC;AAC1E,OAAO,KAAK,EAAE,MAAM,EAAE,MAAM,gBAAgB,CAAC;AAK7C,OAAO,KAAK,EAAE,KAAK,EAAE,MAAM,kBAAkB,CAAC;AAE9C,eAAO,MAAM,QAAQ,EAAE,eAAuC,CAAC;AAE/D,eAAO,MAAM,YAAY,oCAA6B,CAAC;AAEvD,MAAM,WAAW,gBAAgB;IAC/B,MAAM,EAAE,MAAM,CAAC;IACf,WAAW,EAAE,MAAM,CAAC;CACrB;AAED,MAAM,WAAW,eAAe;IAC9B,IAAI,EAAE,MAAM,CAAC;IACb,OAAO,EAAE,OAAO,CAAC;CAClB;AAOD;;;;;;;;;GASG;AACH,wBAAsB,OAAO,CAC3B,GAAG,EAAE,MAAM,EACX,KAAK,EAAE,KAAK,EACZ,KAAK,EAAE,gBAAgB,GACtB,OAAO,CAAC,cAAc,CAAC,eAAe,CAAC,CAAC,CAmB1C"}
+{"version":3,"file":"rollup-write.d.ts","sourceRoot":"","sources":["../../src/commands/rollup-write.ts"],"names":[],"mappings":"AAGA,OAAO,KAAK,EAAE,cAAc,EAAE,eAAe,EAAE,MAAM,oBAAoB,CAAC;AAC1E,OAAO,KAAK,EAAE,MAAM,EAAE,MAAM,gBAAgB,CAAC;AAO7C,OAAO,EAAmB,YAAY,EAAE,MAAM,mBAAmB,CAAC;AAClE,OAAO,KAAK,EAAE,KAAK,EAAE,MAAM,kBAAkB,CAAC;AAE9C,eAAO,MAAM,QAAQ,EAAE,eAAuC,CAAC;AAE/D,OAAO,EAAE,YAAY,EAAE,CAAC;AAExB,MAAM,WAAW,gBAAgB;IAC/B,MAAM,EAAE,MAAM,CAAC;IACf,WAAW,EAAE,MAAM,CAAC;CACrB;AAED,MAAM,WAAW,eAAe;IAC9B,IAAI,EAAE,MAAM,CAAC;IACb,OAAO,EAAE,OAAO,CAAC;CAClB;AAOD;;;;;;;;;;;;;;;;GAgBG;AACH,wBAAsB,OAAO,CAC3B,GAAG,EAAE,MAAM,EACX,KAAK,EAAE,KAAK,EACZ,KAAK,EAAE,gBAAgB,GACtB,OAAO,CAAC,cAAc,CAAC,eAAe,CAAC,CAAC,CAyB1C"}

package/dist/commands/rollup-write.js

@@ -3,10 +3,13 @@ import { readFile } from 'node:fs/promises';
 import path from 'node:path';
 import { NoteNotFoundError } from '../core/errors.js';
 import { ExitCode } from '../core/exit-codes.js';
+import { writeFileAtomic } from '../core/fs/atomic.js';
 import { upsertFencedRegionInFile } from '../core/fs/fenced-region.js';
-import { htmlCommentFence } from '../core/markers.js';
+import { parseNote } from '../core/notes/parse.js';
+import { renderNoteText } from '../core/notes/render.js';
+import { ROLLED_UP_FIELD, ROLLUP_FENCE } from '../core/rollup.js';
 export const requires = { store: 'required' };
-export const ROLLUP_FENCE = htmlCommentFence('rollup');
+export { ROLLUP_FENCE };
 function toStoreRelativePath(env, store, givenPath) {
     const absolute = path.isAbsolute(givenPath) ? givenPath : path.resolve(env.cwd, givenPath);
     return path.relative(store.root, absolute).split(path.sep).join('/');
@@ -20,6 +23,13 @@ function toStoreRelativePath(env, store, givenPath) {
  * codebase. The rollup text itself is supplied by the caller (an agent
  * that already did the reading and synthesis via `rollup gather`'s
  * candidates) — this command's only job is the deterministic write.
+ *
+ * store-primitives-from-migration-audit spec (D4): a write that actually
+ * changes the fenced content ALSO stamps `rolled_up:` with the current
+ * time — recording "when this synthesis was last genuinely produced," the
+ * baseline `rollup stale` compares backlinks against. A true no-op (content
+ * byte-identical) stamps nothing, so re-confirming unchanged content never
+ * resets the clock and the file stays byte-identical across runs.
  */
 export async function execute(env, store, flags) {
     const relativePath = toStoreRelativePath(env, store, flags.entity);
@@ -31,6 +41,11 @@ export async function execute(env, store, flags) {
     if (bodyLines.length > 0 && bodyLines[bodyLines.length - 1] === '')
         bodyLines.pop();
     const { changed } = await upsertFencedRegionInFile(absolutePath, ROLLUP_FENCE, bodyLines);
+    if (changed) {
+        const note = await parseNote(absolutePath, relativePath);
+        const frontmatter = { ...note.frontmatter, [ROLLED_UP_FIELD]: env.now().toISOString() };
+        await writeFileAtomic(absolutePath, renderNoteText(frontmatter, note.body));
+    }
     return {
         exitCode: ExitCode.Ok,
         data: { path: relativePath, changed },

package/dist/commands/rollup-write.js.map

@@ -1 +1 @@
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+{"version":3,"file":"rollup-write.js","sourceRoot":"","sources":["../../src/commands/rollup-write.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,UAAU,EAAE,MAAM,SAAS,CAAC;AACrC,OAAO,EAAE,QAAQ,EAAE,MAAM,kBAAkB,CAAC;AAC5C,OAAO,IAAI,MAAM,WAAW,CAAC;AAG7B,OAAO,EAAE,iBAAiB,EAAE,MAAM,mBAAmB,CAAC;AACtD,OAAO,EAAE,QAAQ,EAAE,MAAM,uBAAuB,CAAC;AACjD,OAAO,EAAE,eAAe,EAAE,MAAM,sBAAsB,CAAC;AACvD,OAAO,EAAE,wBAAwB,EAAE,MAAM,6BAA6B,CAAC;AACvE,OAAO,EAAE,SAAS,EAAE,MAAM,wBAAwB,CAAC;AACnD,OAAO,EAAE,cAAc,EAAE,MAAM,yBAAyB,CAAC;AACzD,OAAO,EAAE,eAAe,EAAE,YAAY,EAAE,MAAM,mBAAmB,CAAC;AAGlE,MAAM,CAAC,MAAM,QAAQ,GAAoB,EAAE,KAAK,EAAE,UAAU,EAAE,CAAC;AAE/D,OAAO,EAAE,YAAY,EAAE,CAAC;AAYxB,SAAS,mBAAmB,CAAC,GAAW,EAAE,KAAY,EAAE,SAAiB;IACvE,MAAM,QAAQ,GAAG,IAAI,CAAC,UAAU,CAAC,SAAS,CAAC,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC,IAAI,CAAC,OAAO,CAAC,GAAG,CAAC,GAAG,EAAE,SAAS,CAAC,CAAC;IAC3F,OAAO,IAAI,CAAC,QAAQ,CAAC,KAAK,CAAC,IAAI,EAAE,QAAQ,CAAC,CAAC,KAAK,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;AACvE,CAAC;AAED;;;;;;;;;;;;;;;;GAgBG;AACH,MAAM,CAAC,KAAK,UAAU,OAAO,CAC3B,GAAW,EACX,KAAY,EACZ,KAAuB;IAEvB,MAAM,YAAY,GAAG,mBAAmB,CAAC,GAAG,EAAE,KAAK,EAAE,KAAK,CAAC,MAAM,CAAC,CAAC;IACnE,MAAM,YAAY,GAAG,IAAI,CAAC,IAAI,CAAC,KAAK,CAAC,IAAI,EAAE,YAAY,CAAC,CAAC;IACzD,IAAI,CAAC,UAAU,CAAC,YAAY,CAAC;QAAE,MAAM,IAAI,iBAAiB,CAAC,YAAY,CAAC,CAAC;IAEzE,MAAM,WAAW,GAAG,MAAM,QAAQ,CAAC,KAAK,CAAC,WAAW,EAAE,MAAM,CAAC,CAAC;IAC9D,MAAM,SAAS,GAAG,WAAW,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC;IAC1C,IAAI,SAAS,CAAC,MAAM,GAAG,CAAC,IAAI,SAAS,CAAC,SAAS,CAAC,MAAM,GAAG,CAAC,CAAC,KAAK,EAAE;QAAE,SAAS,CAAC,GAAG,EAAE,CAAC;IAEpF,MAAM,EAAE,OAAO,EAAE,GAAG,MAAM,wBAAwB,CAAC,YAAY,EAAE,YAAY,EAAE,SAAS,CAAC,CAAC;IAE1F,IAAI,OAAO,EAAE,CAAC;QACZ,MAAM,IAAI,GAAG,MAAM,SAAS,CAAC,YAAY,EAAE,YAAY,CAAC,CAAC;QACzD,MAAM,WAAW,GAAG,EAAE,GAAG,IAAI,CAAC,WAAW,EAAE,CAAC,eAAe,CAAC,EAAE,GAAG,CAAC,GAAG,EAAE,CAAC,WAAW,EAAE,EAAE,CAAC;QACxF,MAAM,eAAe,CAAC,YAAY,EAAE,cAAc,CAAC,WAAW,EAAE,IAAI,CAAC,IAAI,CAAC,CAAC,CAAC;IAC9E,CAAC;IAED,OAAO;QACL,QAAQ,EAAE,QAAQ,CAAC,EAAE;QACrB,IAAI,EAAE,EAAE,IAAI,EAAE,YAAY,EAAE,OAAO,EAAE;QACrC,QAAQ,EAAE,EAAE;QACZ,YAAY,EAAE,OAAO,CAAC,CAAC,CAAC,wBAAwB,YAAY,IAAI,CAAC,CAAC,CAAC,cAAc,YAAY,uBAAuB;QACpH,SAAS,EAAE,KAAK,CAAC,IAAI;QACrB,aAAa,EAAE,KAAK,CAAC,MAAM,CAAC,cAAc;KAC3C,CAAC;AACJ,CAAC"}

package/dist/commands/session-capture.d.ts

@@ -0,0 +1,25 @@
+import type { CommandOutcome, CommandRequires } from '../core/command.js';
+import type { Store } from '../core/store.js';
+export declare const requires: CommandRequires;
+export interface SessionCaptureFlags {
+    proposal: string;
+}
+export type CaptureOutcomeKind = 'wrote' | 'appended' | 'refused';
+export interface CaptureItemReport {
+    id: string;
+    kind: 'note' | 'world_facts' | 'user_facts';
+    path?: string;
+    outcome: CaptureOutcomeKind;
+    reason?: string;
+}
+export interface SessionCaptureData {
+    items: CaptureItemReport[];
+}
+/**
+ * session-capture-command spec (D2): every item is validated and applied
+ * independently — one bad path never blocks the rest. Nothing is scanned
+ * or inferred beyond the proposal; judgment already happened in the
+ * conversation that produced it.
+ */
+export declare function execute(store: Store, flags: SessionCaptureFlags): Promise<CommandOutcome<SessionCaptureData>>;
+//# sourceMappingURL=session-capture.d.ts.map

package/dist/commands/session-capture.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"session-capture.d.ts","sourceRoot":"","sources":["../../src/commands/session-capture.ts"],"names":[],"mappings":"AAIA,OAAO,KAAK,EAAE,cAAc,EAAE,eAAe,EAAE,MAAM,oBAAoB,CAAC;AAK1E,OAAO,KAAK,EAAE,KAAK,EAAE,MAAM,kBAAkB,CAAC;AAG9C,eAAO,MAAM,QAAQ,EAAE,eAAuC,CAAC;AAE/D,MAAM,WAAW,mBAAmB;IAClC,QAAQ,EAAE,MAAM,CAAC;CAClB;AAwBD,MAAM,MAAM,kBAAkB,GAAG,OAAO,GAAG,UAAU,GAAG,SAAS,CAAC;AAElE,MAAM,WAAW,iBAAiB;IAChC,EAAE,EAAE,MAAM,CAAC;IACX,IAAI,EAAE,MAAM,GAAG,aAAa,GAAG,YAAY,CAAC;IAC5C,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,OAAO,EAAE,kBAAkB,CAAC;IAC5B,MAAM,CAAC,EAAE,MAAM,CAAC;CACjB;AAED,MAAM,WAAW,kBAAkB;IACjC,KAAK,EAAE,iBAAiB,EAAE,CAAC;CAC5B;AAsED;;;;;GAKG;AACH,wBAAsB,OAAO,CAAC,KAAK,EAAE,KAAK,EAAE,KAAK,EAAE,mBAAmB,GAAG,OAAO,CAAC,cAAc,CAAC,kBAAkB,CAAC,CAAC,CAuCnH"}

package/dist/commands/session-capture.js

@@ -0,0 +1,119 @@
+import { existsSync } from 'node:fs';
+import { mkdir, readFile } from 'node:fs/promises';
+import path from 'node:path';
+import { parse as parseYaml, stringify as stringifyYaml } from 'yaml';
+import { ExitCode } from '../core/exit-codes.js';
+import { InvalidCaptureProposalError } from '../core/errors.js';
+import { writeFileAtomic } from '../core/fs/atomic.js';
+import { addIdentityEntry, removeIdentityEntry, replaceIdentityEntry } from '../core/identity.js';
+import { sanctionedPath } from '../core/write-lifecycle/path-gate.js';
+export const requires = { store: 'required' };
+/**
+ * session-capture-command spec (D1): the proposal file is the contract
+ * between judgment (the agent, in conversation) and execution (this
+ * command) — the agent writes only approved items, so "approve by id"
+ * happens entirely in the conversation and this command never needs to
+ * know about approval at all.
+ */
+function renderNote(frontmatter, body) {
+    if (!frontmatter || Object.keys(frontmatter).length === 0)
+        return body;
+    return `---\n${stringifyYaml(frontmatter, { indent: 2 })}---\n${body}`;
+}
+async function applyNote(store, id, item) {
+    if (item.mode !== 'create' && item.mode !== 'append') {
+        return { id, kind: 'note', path: item.path, outcome: 'refused', reason: 'mode must be "create" or "append"' };
+    }
+    const gate = await sanctionedPath(store.config, store.root, item.path);
+    if (!gate.ok) {
+        return { id, kind: 'note', path: item.path, outcome: 'refused', reason: gate.reason };
+    }
+    const absolutePath = path.join(store.root, item.path);
+    const exists = existsSync(absolutePath);
+    if (item.mode === 'create') {
+        if (exists)
+            return { id, kind: 'note', path: item.path, outcome: 'refused', reason: 'already exists; use mode: append' };
+        const frontmatter = { ...item.frontmatter };
+        if (item.visibility !== undefined)
+            frontmatter[store.config.fields.visibility] = item.visibility;
+        await mkdir(path.dirname(absolutePath), { recursive: true });
+        await writeFileAtomic(absolutePath, renderNote(frontmatter, item.body));
+        return { id, kind: 'note', path: item.path, outcome: 'wrote' };
+    }
+    if (!exists)
+        return { id, kind: 'note', path: item.path, outcome: 'refused', reason: 'append target does not exist' };
+    const existing = await readFile(absolutePath, 'utf8');
+    const separator = existing.length > 0 && !existing.endsWith('\n') ? '\n' : '';
+    await writeFileAtomic(absolutePath, `${existing}${separator}${item.body}`);
+    return { id, kind: 'note', path: item.path, outcome: 'appended' };
+}
+async function applyIdentityDelta(store, id, kind, role, item) {
+    try {
+        if (item.action === 'add') {
+            if (item.text === undefined)
+                throw new Error('action "add" requires text');
+            const result = await addIdentityEntry(store.root, store.config, role, item.text);
+            return { id, kind, path: result.path, outcome: 'wrote' };
+        }
+        if (item.action === 'replace') {
+            if (item.text === undefined || item.match === undefined)
+                throw new Error('action "replace" requires text and match');
+            const result = await replaceIdentityEntry(store.root, store.config, role, item.match, item.text);
+            return { id, kind, path: result.path, outcome: 'wrote' };
+        }
+        if (item.action === 'remove') {
+            if (item.match === undefined)
+                throw new Error('action "remove" requires match');
+            const result = await removeIdentityEntry(store.root, store.config, role, item.match);
+            return { id, kind, path: result.path, outcome: 'wrote' };
+        }
+        throw new Error(`unknown action "${item.action}"`);
+    }
+    catch (err) {
+        return { id, kind, outcome: 'refused', reason: err instanceof Error ? err.message : String(err) };
+    }
+}
+/**
+ * session-capture-command spec (D2): every item is validated and applied
+ * independently — one bad path never blocks the rest. Nothing is scanned
+ * or inferred beyond the proposal; judgment already happened in the
+ * conversation that produced it.
+ */
+export async function execute(store, flags) {
+    let raw;
+    try {
+        raw = await readFile(flags.proposal, 'utf8');
+    }
+    catch (err) {
+        throw new InvalidCaptureProposalError(flags.proposal, err instanceof Error ? err.message : String(err));
+    }
+    let proposal;
+    try {
+        proposal = (parseYaml(raw) ?? {});
+    }
+    catch (err) {
+        throw new InvalidCaptureProposalError(flags.proposal, err instanceof Error ? err.message : String(err));
+    }
+    const items = [];
+    for (const [index, item] of (proposal.notes ?? []).entries()) {
+        items.push(await applyNote(store, item.id ?? `notes[${index}]`, item));
+    }
+    for (const [index, item] of (proposal.world_facts ?? []).entries()) {
+        items.push(await applyIdentityDelta(store, item.id ?? `world_facts[${index}]`, 'world_facts', 'world-facts', item));
+    }
+    for (const [index, item] of (proposal.user_facts ?? []).entries()) {
+        items.push(await applyIdentityDelta(store, item.id ?? `user_facts[${index}]`, 'user_facts', 'user-facts', item));
+    }
+    const refused = items.filter((item) => item.outcome === 'refused');
+    const written = items.filter((item) => item.outcome === 'wrote' || item.outcome === 'appended');
+    return {
+        exitCode: refused.length > 0 ? ExitCode.CheckFailed : ExitCode.Ok,
+        data: { items },
+        findings: [],
+        humanSummary: `${written.length} item(s) written` +
+            (refused.length > 0 ? `; ${refused.length} refused: ${refused.map((item) => `${item.id} (${item.reason})`).join(', ')}` : '.'),
+        storeRoot: store.root,
+        schemaVersion: store.config.schema_version,
+    };
+}
+//# sourceMappingURL=session-capture.js.map

package/dist/commands/session-capture.js.map

@@ -0,0 +1 @@
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package/dist/commands/session-land.d.ts

@@ -0,0 +1,45 @@
+import type { MergeMethod } from '../adapters/forge/types.js';
+import type { Adapter } from '../adapters/types.js';
+import type { CommandOutcome, CommandRequires } from '../core/command.js';
+import { type RunEnv } from '../core/env.js';
+import type { Store } from '../core/store.js';
+export declare const requires: CommandRequires;
+export interface SessionLandFlags {
+    pr?: number;
+    branch?: string;
+    yes?: boolean;
+    mergeMethod?: MergeMethod;
+    reap?: boolean;
+}
+export interface SyncOutcome {
+    attempted: boolean;
+    synced: boolean;
+    reason?: string;
+}
+export interface ReapOutcome {
+    attempted: boolean;
+    reaped: boolean;
+    reason?: string;
+}
+export interface SessionLandData {
+    branch: string;
+    pr: {
+        number: number;
+        url: string;
+        title: string;
+        state: string;
+        mergeable: string;
+    };
+    gate: 'confirmed' | 'declined' | 'not_required';
+    merged: boolean;
+    sync: SyncOutcome;
+    reap: ReapOutcome;
+}
+/**
+ * session-submit-and-land spec (D1): every step re-reads live state (the
+ * pull request's state, the root checkout's branch, the worktree list), so
+ * a retry after a partial failure is just running the command again — it
+ * naturally skips whatever already happened rather than replaying it.
+ */
+export declare function execute(env: RunEnv, store: Store, flags: SessionLandFlags, registry?: readonly Adapter[]): Promise<CommandOutcome<SessionLandData>>;
+//# sourceMappingURL=session-land.d.ts.map

package/dist/commands/session-land.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"session-land.d.ts","sourceRoot":"","sources":["../../src/commands/session-land.ts"],"names":[],"mappings":"AACA,OAAO,KAAK,EAAoB,WAAW,EAAE,MAAM,4BAA4B,CAAC;AAGhF,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,sBAAsB,CAAC;AACpD,OAAO,KAAK,EAAE,cAAc,EAAE,eAAe,EAAE,MAAM,oBAAoB,CAAC;AAC1E,OAAO,EAAiB,KAAK,MAAM,EAAE,MAAM,gBAAgB,CAAC;AAe5D,OAAO,KAAK,EAAE,KAAK,EAAE,MAAM,kBAAkB,CAAC;AAE9C,eAAO,MAAM,QAAQ,EAAE,eAAuC,CAAC;AAE/D,MAAM,WAAW,gBAAgB;IAC/B,EAAE,CAAC,EAAE,MAAM,CAAC;IACZ,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,GAAG,CAAC,EAAE,OAAO,CAAC;IACd,WAAW,CAAC,EAAE,WAAW,CAAC;IAC1B,IAAI,CAAC,EAAE,OAAO,CAAC;CAChB;AAED,MAAM,WAAW,WAAW;IAC1B,SAAS,EAAE,OAAO,CAAC;IACnB,MAAM,EAAE,OAAO,CAAC;IAChB,MAAM,CAAC,EAAE,MAAM,CAAC;CACjB;AAED,MAAM,WAAW,WAAW;IAC1B,SAAS,EAAE,OAAO,CAAC;IACnB,MAAM,EAAE,OAAO,CAAC;IAChB,MAAM,CAAC,EAAE,MAAM,CAAC;CACjB;AAED,MAAM,WAAW,eAAe;IAC9B,MAAM,EAAE,MAAM,CAAC;IACf,EAAE,EAAE;QAAE,MAAM,EAAE,MAAM,CAAC;QAAC,GAAG,EAAE,MAAM,CAAC;QAAC,KAAK,EAAE,MAAM,CAAC;QAAC,KAAK,EAAE,MAAM,CAAC;QAAC,SAAS,EAAE,MAAM,CAAA;KAAE,CAAC;IACrF,IAAI,EAAE,WAAW,GAAG,UAAU,GAAG,cAAc,CAAC;IAChD,MAAM,EAAE,OAAO,CAAC;IAChB,IAAI,EAAE,WAAW,CAAC;IAClB,IAAI,EAAE,WAAW,CAAC;CACnB;AAED;;;;;GAKG;AACH,wBAAsB,OAAO,CAC3B,GAAG,EAAE,MAAM,EACX,KAAK,EAAE,KAAK,EACZ,KAAK,EAAE,gBAAgB,EACvB,QAAQ,GAAE,SAAS,OAAO,EAAqB,GAC9C,OAAO,CAAC,cAAc,CAAC,eAAe,CAAC,CAAC,CA4D1C"}

package/dist/commands/session-land.js

@@ -0,0 +1,140 @@
+import path from 'node:path';
+import { configuredAdapters } from '../adapters/registry.js';
+import { BUILTIN_ADAPTERS } from '../adapters/builtin/index.js';
+import { isInteractive } from '../core/env.js';
+import { MergeNotConfirmedError, NoForgeConfiguredError, PullRequestClosedError, PullRequestHeadMismatchError, PullRequestNotMergeableError, SessionLandConsentRequiredError, SessionLandOnDefaultBranchError, } from '../core/errors.js';
+import { ExitCode } from '../core/exit-codes.js';
+import { currentBranch } from '../core/git/repo.js';
+import { fetchOrigin, listWorktrees, removeWorktree, deleteBranch, hasRemote } from '../core/git/worktree.js';
+import { isWorkingTreeClean } from '../core/git/repo.js';
+import { isSessionBranch, isSessionWorktreePath } from '../core/session.js';
+export const requires = { store: 'required' };
+/**
+ * session-submit-and-land spec (D1): every step re-reads live state (the
+ * pull request's state, the root checkout's branch, the worktree list), so
+ * a retry after a partial failure is just running the command again — it
+ * naturally skips whatever already happened rather than replaying it.
+ */
+export async function execute(env, store, flags, registry = BUILTIN_ADAPTERS) {
+    // D1 / the non-interactive-consent scenario: fails before reading or
+    // changing anything on the forge — checked first, before any git or
+    // network call at all.
+    if (!flags.yes && !isInteractive(env)) {
+        throw new SessionLandConsentRequiredError();
+    }
+    const defaultBranch = store.config.git.default_branch;
+    const branch = flags.branch ?? (await currentBranch(env.git, store.root));
+    if (branch === defaultBranch) {
+        throw new SessionLandOnDefaultBranchError(branch);
+    }
+    const [forgeAdapter] = configuredAdapters(store.config, 'forge', registry);
+    if (!forgeAdapter || !(await forgeAdapter.isAvailable(store.root))) {
+        throw new NoForgeConfiguredError();
+    }
+    const ref = flags.pr !== undefined ? String(flags.pr) : branch;
+    let pr = await forgeAdapter.pullRequest(store.root, ref);
+    if (pr.headBranch !== branch) {
+        throw new PullRequestHeadMismatchError(branch, pr.headBranch);
+    }
+    let merged = pr.state === 'merged';
+    let gate = 'not_required';
+    if (pr.state === 'closed') {
+        throw new PullRequestClosedError(pr.number);
+    }
+    if (pr.state === 'open') {
+        if (pr.mergeable === 'unknown') {
+            pr = await forgeAdapter.pullRequest(store.root, ref); // D1: re-query once before stopping
+        }
+        if (pr.mergeable === 'conflicting' || pr.mergeable === 'unknown') {
+            throw new PullRequestNotMergeableError(pr.number, pr.mergeable);
+        }
+        // pr.mergeable === 'mergeable' from here on.
+        const confirmed = flags.yes ? true : await env.prompter.confirm({ message: gateMessage(pr) });
+        gate = confirmed ? 'confirmed' : 'declined';
+        if (!confirmed) {
+            return outcome(store, branch, pr, gate, false, { attempted: false, synced: false }, { attempted: false, reaped: false });
+        }
+        await forgeAdapter.mergePullRequest(store.root, pr.number, flags.mergeMethod ?? 'squash');
+        const after = await forgeAdapter.pullRequest(store.root, ref);
+        if (after.state !== 'merged') {
+            throw new MergeNotConfirmedError(pr.number);
+        }
+        pr = after;
+        merged = true;
+    }
+    const sync = await syncRootCheckout(env, store, defaultBranch);
+    const reap = await reapWorktree(env, store, branch, flags.reap ?? false);
+    return outcome(store, branch, pr, gate, merged, sync, reap);
+}
+function gateMessage(pr) {
+    return `PR #${pr.number} "${pr.title}" (${pr.url}) — OPEN, MERGEABLE. Merge?`;
+}
+/** D2: fast-forward only, in whatever checkout this command runs from — never checked out, reset, or discarded. */
+async function syncRootCheckout(env, store, defaultBranch) {
+    const branch = await currentBranch(env.git, store.root);
+    if (branch !== defaultBranch) {
+        return { attempted: false, synced: false, reason: 'root checkout is not on the default branch' };
+    }
+    if (!(await hasRemote(env.git, store.root))) {
+        return { attempted: false, synced: false, reason: 'no remote configured' };
+    }
+    const fetched = await fetchOrigin(env.git, store.root, defaultBranch);
+    if (!fetched) {
+        return { attempted: true, synced: false, reason: 'fetch failed' };
+    }
+    const merge = await env.git.run(['merge', '--ff-only', `origin/${defaultBranch}`], { cwd: store.root, allowFailure: true });
+    if (merge.exitCode !== 0) {
+        return { attempted: true, synced: false, reason: 'cannot fast-forward (diverged from origin)' };
+    }
+    return { attempted: true, synced: true };
+}
+/** D3: opt-in, and scoped to a worktree `session start` made — never the one this command is currently running from. */
+async function reapWorktree(env, store, branch, requested) {
+    if (!requested) {
+        return { attempted: false, reaped: false, reason: 'pass --reap, or run `ctxr session reap`' };
+    }
+    const worktrees = await listWorktrees(env.git, store.root);
+    const target = worktrees.find((w) => w.branch === branch);
+    if (!target) {
+        return { attempted: true, reaped: false, reason: 'no worktree found for this branch' };
+    }
+    if (!isSessionBranch(store.config, branch) && !isSessionWorktreePath(store.config, target.path)) {
+        return { attempted: true, reaped: false, reason: 'not a session worktree' };
+    }
+    if (path.resolve(target.path) === path.resolve(store.root)) {
+        return {
+            attempted: true,
+            reaped: false,
+            reason: 'cannot remove the worktree this command is currently running from; run `ctxr session reap` from elsewhere',
+        };
+    }
+    if (!(await isWorkingTreeClean(env.git, target.path))) {
+        return { attempted: true, reaped: false, reason: 'worktree has uncommitted changes' };
+    }
+    await removeWorktree(env.git, store.root, target.path);
+    await deleteBranch(env.git, store.root, branch);
+    return { attempted: true, reaped: true };
+}
+function outcome(store, branch, pr, gate, merged, sync, reap) {
+    const summary = gate === 'declined'
+        ? `Merge declined for PR #${pr.number}; nothing landed.`
+        : `PR #${pr.number} ${merged ? 'merged' : 'not merged'}` +
+            `; sync ${sync.synced ? 'ok' : sync.attempted ? 'skipped: ' + sync.reason : 'not attempted'}` +
+            `; reap ${reap.reaped ? 'ok' : reap.attempted ? 'skipped: ' + reap.reason : 'not attempted'}.`;
+    return {
+        exitCode: ExitCode.Ok,
+        data: {
+            branch,
+            pr: { number: pr.number, url: pr.url, title: pr.title, state: pr.state, mergeable: pr.mergeable },
+            gate,
+            merged,
+            sync,
+            reap,
+        },
+        findings: [],
+        humanSummary: summary,
+        storeRoot: store.root,
+        schemaVersion: store.config.schema_version,
+    };
+}
+//# sourceMappingURL=session-land.js.map

package/dist/commands/session-land.js.map

@@ -0,0 +1 @@
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package/dist/commands/session-list.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"session-list.d.ts","sourceRoot":"","sources":["../../src/commands/session-list.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,cAAc,EAAE,eAAe,EAAE,MAAM,oBAAoB,CAAC;AAC1E,OAAO,KAAK,EAAE,MAAM,EAAE,MAAM,gBAAgB,CAAC;AAI7C,OAAO,KAAK,EAAE,KAAK,EAAE,MAAM,kBAAkB,CAAC;AAE9C,eAAO,MAAM,QAAQ,EAAE,eAAuC,CAAC;AAE/D,MAAM,WAAW,WAAW;IAC1B,MAAM,EAAE,MAAM,CAAC;IACf,QAAQ,EAAE,MAAM,CAAC;IACjB,IAAI,EAAE,MAAM,CAAC;CACd;AAED,MAAM,WAAW,eAAe;IAC9B,QAAQ,EAAE,WAAW,EAAE,CAAC;CACzB;AAED,wBAAsB,OAAO,CAAC,GAAG,EAAE,MAAM,EAAE,KAAK,EAAE,KAAK,GAAG,OAAO,CAAC,cAAc,CAAC,eAAe,CAAC,CAAC,CAcjG"}
+{"version":3,"file":"session-list.d.ts","sourceRoot":"","sources":["../../src/commands/session-list.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,cAAc,EAAE,eAAe,EAAE,MAAM,oBAAoB,CAAC;AAC1E,OAAO,KAAK,EAAE,MAAM,EAAE,MAAM,gBAAgB,CAAC;AAI7C,OAAO,KAAK,EAAE,KAAK,EAAE,MAAM,kBAAkB,CAAC;AAE9C,eAAO,MAAM,QAAQ,EAAE,eAAuC,CAAC;AAE/D,MAAM,WAAW,WAAW;IAC1B,MAAM,EAAE,MAAM,CAAC;IACf,QAAQ,EAAE,MAAM,CAAC;IACjB,IAAI,EAAE,MAAM,CAAC;CACd;AAED,MAAM,WAAW,eAAe;IAC9B,QAAQ,EAAE,WAAW,EAAE,CAAC;CACzB;AAED,wBAAsB,OAAO,CAAC,GAAG,EAAE,MAAM,EAAE,KAAK,EAAE,KAAK,GAAG,OAAO,CAAC,cAAc,CAAC,eAAe,CAAC,CAAC,CAkBjG"}

package/dist/commands/session-list.js

@@ -1,11 +1,12 @@
 import { ExitCode } from '../core/exit-codes.js';
 import { listWorktrees } from '../core/git/worktree.js';
-import { isSessionBranch } from '../core/session.js';
+import { isSessionBranch, isSessionWorktreePath } from '../core/session.js';
 export const requires = { store: 'required' };
 export async function execute(env, store) {
     const worktrees = await listWorktrees(env.git, store.root);
     const sessions = worktrees
-        .filter((w) => w.branch !== null && isSessionBranch(store.config, w.branch))
+        .filter((w) => w.branch !== null &&
+        (isSessionBranch(store.config, w.branch) || isSessionWorktreePath(store.config, w.path)))
         .map((w) => ({ branch: w.branch, worktree: w.path, head: w.head }));
     return {
         exitCode: ExitCode.Ok,