create-yss-spec 2.1.4 → 2.1.6

package/template/.claude/skills/drawio-academic-skills/SKILL.md

@@ -1,161 +0,0 @@
----
-name: drawio-academic-skills
-version: "2.7.0"
-description: "Publication-figure overlay for draw.io. Use instead of drawio whenever the diagram is for a paper, thesis, dissertation, journal, conference, IEEE/ACM submission, manuscript, camera-ready, Word/LaTeX figure, or other publication. Applies venue, figure-type, color, caption/legend, formula, and paper-readability gates for architecture, workflow, roadmap, network-topology, and replicated paper figures."
-license: MIT
-homepage: https://github.com/bahayonghang/drawio-skills
-compatibility: "Requires sibling ../drawio in the same skills directory. Node 20+ is required for the shared YAML/CLI workflow. draw.io Desktop produces the default 300dpi PNG (plus PDF/JPG or embedded .drawio.svg); without it, image exports fall back to a standalone SVG. No MCP server is required."
-platforms: [macos, linux, windows]
-metadata:
-  category: visual-design
-  tags:
-    - drawio
-    - academic
-    - paper-figure
-    - ieee
-    - thesis
-    - manuscript
-    - workflow
-    - math
-    - svg
-argument-hint: [figure-description-or-instruction]
-allowed-tools: Read, Write, Bash, AskUserQuestion
----
-
-# Draw.io Academic Overlay
-
-Create, edit, replicate, validate, and export publication-ready draw.io figures by applying academic policy on top of the sibling Draw.io Base Skill. This overlay is intentionally thin: it owns academic policy/gates, academic docs, and paper examples; the sibling base at `../drawio` owns all shared execution (CLI, schema, renderer, themes including `academic`/`academic-color`, references, examples, style presets, Desktop export).
-
-## Required Sibling Base
-
-Resolve shared resources relative to this overlay directory:
-
-- CLI `../drawio/scripts/cli.js`; URL fallback `../drawio/scripts/runtime/diagrams-net-url.js`
-- Schema `../drawio/assets/schemas/spec.schema.json`; themes `../drawio/assets/themes/`; palettes `../drawio/assets/palettes/`
-- References `../drawio/references/docs/`, `../drawio/references/official/`, `../drawio/references/workflows/`, `../drawio/references/examples/`; shared rework contract `../drawio/references/workflows/visual-review.md`
-- Built-in style presets `../drawio/styles/built-in/`
-
-Overlay-local assets: `references/docs/publication-overlay.md`, `academic-figure-playbook.md`, `academic-export-checklist.md`, `references/examples/`, `references/templates/`.
-
-If `../drawio/scripts/cli.js` is missing, stop and report that the sibling base skill must be installed next to this overlay; never silently recreate or vendor-copy base resources into the overlay.
-
-## Non-Negotiable Contract
-
-- Keep academic authoring YAML-first and offline-first. Never create, require, or route through `.mcp.json`, MCP, or a live backend.
-- Treat `.drawio` and a 300dpi `.png` (via draw.io Desktop) as the default academic final deliverables; SVG is the offline fallback without Desktop — report the fallback and never claim files that were not produced.
-- Keep `.spec.yaml`, `.arch.json`, raw YAML, and diagnostics in a project-local work directory such as `.drawio-tmp/<name>/`, unless the user explicitly asks for a reproducible sidecar bundle beside the final output.
-- Perform paper-readability and visual self-checks on the exported PNG (or the fallback SVG) first. Do not substitute browser or Playwright screenshots when an exported artifact exists.
-- Use the sibling base `../drawio/references/workflows/visual-review.md` for preview structure, issue records, YAML-first rework, and stopping rules; this overlay adds only publication checks.
-- Treat external image-generation previews as optional concept previews only. They never replace YAML, artifacts, sidecars, or exported-artifact verification.
-- Do not create or modify scratch JS scripts under a user's project-local `.agents/skills/drawio`; port durable fixes to the sibling base skill source instead.
-
-## Academic Preflight
-
-Before generating or editing, determine and state: venue/audience; figure type (`architecture`, `roadmap`, or `workflow`); color policy; caption/legend/title, formula, and text-fidelity needs; export expectations. Estimate the **node budget** (authoritative targets, thresholds, and split strategies: `references/docs/academic-figure-playbook.md § Node Budget Management`); over target, confirm a split/simplify strategy with the user and start from the compact patterns in `references/templates/`. Full decision detail: `references/docs/publication-overlay.md § Required Academic Decisions`.
-
-### Palette Preflight
-
-After the venue is known, if the user did not specify a palette, use `AskUserQuestion` as a single-select: venue recommendation first with `(Recommended)`, 3-4 choices, each palette's `displayName` as the label, and colorblind/grayscale safety plus venue rationale in each description. Venue map: `references/docs/academic-figure-playbook.md § Venue Palette Mapping`.
-
-If the user already specified a palette or an unambiguous style, map it directly and do not ask. For academic replication, preserve the source palette and skip selection unless the user explicitly requests normalization. Record the chosen name in `meta.palette`. The completion report must name the palette and its colorblind/grayscale safety flags, including any print-gate downgrade.
-
-## Source Understanding
-
-Extract only what the figure needs from papers, reference images, or text-only prompts; keep uncertainties explicit. See `references/docs/publication-overlay.md § Source Understanding` and `references/docs/academic-figure-playbook.md § Scientific Figure Patterns`.
-
-## Diagram Plan Gate
-
-For complex paper-derived figures or academic image-replication work, present a concise diagram plan and wait for confirmation before rendering; simple academic diagrams may skip the gate. Template: `references/docs/publication-overlay.md § Diagram Plan Gate`.
-
-## Optional Image Preview
-
-Only after the diagram plan is confirmed, and only with privacy approval before sending unpublished or sensitive content; treat generated text as approximate and correct final labels/formulas/geometry in YAML. Full rules: `references/docs/publication-overlay.md § Optional Image Preview`.
-
-## Task Routing
-
-Choose one route, then load only its files. `overlay` = this directory; `base` = the sibling, resolved from this directory.
-
-- `academic-create` — paper, thesis, IEEE, manuscript, journal, publication-ready figure → overlay `references/docs/publication-overlay.md`, `academic-figure-playbook.md`, `academic-export-checklist.md`; base `../drawio/references/workflows/create.md`
-- `math-formula` — formula, equation, LaTeX, AsciiMath, MathJax, 公式 → base `../drawio/references/docs/math-typesetting.md`, `design-system/formulas.md`
-- `edit` — modify an academic bundle or imported `.drawio` → base `../drawio/references/workflows/edit.md`, `../drawio/references/docs/migration-readiness.md`
-- `replicate` — redraw screenshot, image, SVG, or reference paper figure → overlay `references/docs/publication-overlay.md`; base `../drawio/references/workflows/replicate.md`, `../drawio/references/docs/design-system/specification.md`, `color-guide.md`
-- `base-capabilities` — code/config/live imports, raster extraction, multi-page bundles, AI/SysML/BPMN stencils, or offline postprocess before publication checks → base `../drawio/references/docs/upstream-capability-compatibility.md`; overlay `references/docs/publication-overlay.md`
-- `stencil-heavy` — academic cloud, network, AWS, Azure, GCP, Cisco, Kubernetes figure → base `../drawio/references/docs/stencil-library-guide.md`, `ieee-network-diagrams.md`, `../drawio/references/official/xml-reference.md`
-- `style-preset` — learn/use/list/delete/rename visual style presets → base `../drawio/references/docs/style-extraction.md`, `style-presets.md`, `../drawio/styles/built-in/`
-- `direct-xml-exception` — tiny handoff-only XML or exact mxGraph control → base `../drawio/references/upstream/pure-drawio-skill.md`, `../drawio/references/official/xml-reference.md`
-
-## Academic Defaults
-
-For academic-paper requests, set these before rendering:
-
-```yaml
-meta:
-  profile: academic-paper
-  figureType: architecture # architecture | roadmap | workflow
-  theme: academic # or academic-color when color is acceptable
-  palette: okabe-ito # from venue preflight; ieee-bw for IEEE print
-  title: Caption-ready title
-  description: One sentence explaining the figure intent
-  legend: Required when symbols, colors, line styles, or icons need explanation
-  print: { target: cn-thesis } # optional gate: cn-thesis | ieee-single | ieee-double
-```
-
-Default deliverables:
-
-- `<name>.drawio`
-- `<name>.png` (300dpi, via draw.io Desktop; falls back to `<name>.svg` without Desktop)
-
-Intermediate work directory:
-
-- `<name>.spec.yaml`, `<name>.arch.json`, raw or normalized YAML, diagnostics
-
-**For journal / IEEE vector submission, explicitly export `<name>.pdf` (or `.svg`)** — vector required, not raster PNG. Other formats only on request.
-
-## Create Flow
-
-1. Classify the figure as `architecture`, `roadmap`, or `workflow`; complex paper-derived requests confirm the diagram plan first (preview only after confirmation).
-2. Draft or normalize the YAML spec as the canonical source; shorten labels before shrinking fonts.
-3. Validate and render through the sibling base CLI, then self-check the exported artifact before reporting:
-
-```bash
-node ../drawio/scripts/cli.js input.yaml figure.drawio --validate --write-sidecars --sidecar-dir .drawio-tmp/figure --strict-warnings
-node ../drawio/scripts/cli.js input.yaml figure.png --validate --use-desktop
-```
-
-Figure-type patterns: `references/docs/academic-figure-playbook.md`.
-
-## Edit and Replicate Flow
-
-- Edit the `.spec.yaml` sidecar first; if only `.drawio` exists, import via the base CLI (`--input-format drawio --export-spec`).
-- For image/SVG replication, preserve text boxes, captions, legends, formulas, edge labels, baseline/offset, font family/size/italic state, alignment, and spacing when visible; use explicit `bounds` for standalone text/formula blocks and `labelOffset` for connector labels off the line.
-- Keep regenerated files on the same basename for round-trippable artifacts and sidecars.
-
-## Export Policy
-
-Vector submission (journal/IEEE) exports PDF (or SVG) explicitly. Without Desktop, generate a diagrams.net URL and report the missing export honestly:
-
-```bash
-node ../drawio/scripts/cli.js input.yaml figure.pdf --validate --use-desktop
-node ../drawio/scripts/runtime/diagrams-net-url.js figure.drawio
-```
-
-## Style Presets
-
-Use overlay-specific user presets first (`~/.drawio-academic-skills/styles/`), then sibling base bundled presets (`../drawio/styles/built-in/`). Never mutate bundled base presets; copy into the user preset directory before editing or defaulting.
-
-## Quality Gate
-
-Do not claim completion until:
-
-- final `.drawio` and `.png` (or fallback `.svg`) align with work-dir `.spec.yaml`/`.arch.json`; `meta.profile` is `academic-paper` and `meta.figureType` is `architecture`, `roadmap`, or `workflow`
-- node count satisfies the playbook budget (`references/docs/academic-figure-playbook.md § Node Budget Management`); split or simplify when exceeded
-- labels readable at paper/A4 scale; formulas use official delimiters (`$$...$$`, `\(...\)`, AsciiMath backticks); font classes follow the ladder with no label-fit overflow warnings
-- mixed CJK/Latin labels resolve to the Times New Roman + SimSun stack (theme `cjk` stack or `meta.font`)
-- captions, legends, callouts, formulas, and edge labels are not clipped or placed on connector lines; legends compact (single multi-line text node)
-- colors are not the only carrier of meaning; `meta.palette` matches the venue decision; `PALETTE_PRINT_GATE` is clear — offer `ieee-bw`/`tol-high-contrast` when strict print safety fails
-- the visual self-check followed sibling base `../drawio/references/workflows/visual-review.md` on the exported PNG (or fallback SVG) before any live/browser preview; academic checks additionally cover A4 readability, caption/legend, formulas, print meaning, and venue constraints
-- requested Desktop exports were attempted or reported unavailable; no MCP config, server, or live backend required
-
-## Completion Report
-
-End with a concise report: deliverables with paths; intermediate work directory when sidecars were generated; sibling base CLI commands run; the selected palette, its colorblind/grayscale safety flags, and any print-gate downgrade; unavailable Desktop exports and the fallback provided; remaining venue-specific manual checks.

package/template/.claude/skills/drawio-academic-skills/__yss_dotfile__.gitignore

@@ -1,12 +0,0 @@
-# macOS
-.DS_Store
-
-# Tooling artifacts
-.playwright-mcp/
-logs/
-
-# Legacy local timestamp (no longer written; kept ignored defensively)
-.last_update
-
-# Superpowers skill files (local-only)
-docs/superpowers

package/template/.claude/skills/drawio-academic-skills/agents/interface.yaml

@@ -1,25 +0,0 @@
-interface:
-  display_name: 'Draw.io Academic Figures'
-  short_description: 'Create publication-ready draw.io figures with YAML sidecars, academic checks, Desktop export, and base-backed style presets'
-  brand_color: '#2563EB'
-
-policy:
-  allow_implicit_invocation: true
-
-capabilities:
-  - Create academic-paper draw.io figures from natural language or YAML specs
-  - Consume sibling base code/config/live imports and multi-page bundles before publication checks
-  - Apply publication policy after sibling base postprocess operations without copying their runtime
-  - Generate .drawio, .spec.yaml, .arch.json, and SVG as the default offline bundle
-  - Export PNG, SVG, PDF, and JPG through draw.io Desktop when available
-  - Generate diagrams.net browser URLs when Desktop export is unavailable
-  - Select from the sibling base palette catalog using venue-aware recommendations
-  - Enforce colorblind, grayscale, and publication print-safety palette gates
-  - Apply user style presets and sibling base bundled presets
-  - Self-check exported images and support targeted refinement loops
-  - Work without MCP through the sibling base CLI exports and diagrams.net URL fallback
-
-prerequisites:
-  - Node 20+
-  - Sibling base skill installed at ../drawio
-  - draw.io Desktop app for PNG/PDF/JPG and embedded SVG exports

package/template/.claude/skills/drawio-academic-skills/agents/openai.yaml

@@ -1,24 +0,0 @@
-interface:
-  display_name: "Draw.io Academic Figures"
-  short_description: "Create publication-ready draw.io figures with YAML sidecars, academic checks, Desktop export, and base-backed style presets"
-  brand_color: "#2563EB"
-
-policy:
-  allow_implicit_invocation: true
-
-capabilities:
-  - Create academic-paper draw.io figures from natural language or YAML specs
-  - Consume sibling base code/config/live imports and multi-page bundles before publication checks
-  - Apply publication policy after sibling base postprocess operations without copying their runtime
-  - Generate .drawio, .spec.yaml, .arch.json, and SVG as the default offline bundle
-  - Export PNG, SVG, PDF, and JPG through draw.io Desktop when available
-  - Generate diagrams.net browser URLs when Desktop export is unavailable
-  - Select from the sibling base palette catalog using venue-aware recommendations
-  - Enforce colorblind, grayscale, and publication print-safety palette gates
-  - Apply user style presets and sibling base bundled presets
-  - Self-check exported images and support targeted refinement loops
-  - Work without MCP through the sibling base CLI exports and diagrams.net URL fallback
-
-prerequisites:
-  - Node 20+
-  - draw.io Desktop app for PNG/PDF/JPG and embedded SVG exports

package/template/.claude/skills/drawio-academic-skills/evals/README.md

@@ -1,13 +0,0 @@
-# Evals
-
-`evals.json` is the maintained eval set for this skill; its `version` tracks `SKILL.md`. There is no automated runner: each eval is a prompt plus an assertion checklist, verified manually or by an agent, assertion by assertion.
-
-## Historical snapshots
-
-The other files are frozen artifacts from earlier eval rounds. They are kept for traceability and are not consumed by any tooling:
-
-- `baseline-prompts.json` — prompt set (id / profile / prompt) used for the pre-improvement baseline run.
-- `test-prompts.json` — overlay-policy spot-check prompts (id / prompt / expected).
-- `darwin-results.tsv` — score log from the skill-creator Darwin improvement round of 2026-04-27 (old/new score, keep/revert status, per-dimension notes).
-
-To rerun an eval round, feed the prompts to a fresh session and record pass/fail per assertion in a new dated file; do not overwrite these snapshots.

package/template/.claude/skills/drawio-academic-skills/evals/baseline-prompts.json

@@ -1,52 +0,0 @@
-[
-  {
-    "id": "academic-ieee-campus-network",
-    "profile": "academic-paper",
-    "prompt": "Create an IEEE-style campus network paper figure with core, distribution, and access layers in grayscale. Return final .drawio and .svg, with sidecars in a work directory."
-  },
-  {
-    "id": "academic-research-workflow-paper",
-    "profile": "academic-paper",
-    "prompt": "Create a research workflow figure for a manuscript showing data collection, preprocessing, modeling, validation, and reporting."
-  },
-  {
-    "id": "academic-system-architecture-paper",
-    "profile": "academic-paper",
-    "prompt": "Create a system architecture paper figure with client, API, worker, and storage layers. Make it readable in a two-column paper."
-  },
-  {
-    "id": "academic-ablation-pipeline",
-    "profile": "academic-paper",
-    "prompt": "Create an ablation-study figure comparing a baseline and two variants before a shared evaluation block for a conference paper."
-  },
-  {
-    "id": "academic-paper-evidence-chain-preview",
-    "profile": "academic-paper",
-    "prompt": "I have a draft optimization paper about traffic-signal control. Build a publication figure from the paper logic, not just a list of sections: problem gap, sensor data, assumptions, multi-agent controller, simulation scenarios, metrics, results, and contribution. Use an image-generation concept preview if appropriate, but don't send raw unpublished text externally without asking."
-  },
-  {
-    "id": "academic-thesis-word-a4-bundle",
-    "profile": "academic-paper",
-    "prompt": "Create an A4-safe thesis figure for Word export. Deliver the editable bundle plus SVG, and include PNG only if draw.io Desktop is available."
-  },
-  {
-    "id": "academic-formula-publication-figure",
-    "profile": "academic-paper",
-    "prompt": "Create a publication-ready training pipeline figure with a visible loss formula $$L = -\\sum y_i \\log(\\hat{y}_i)$$ and an inline metric note \\(F_1\\)."
-  },
-  {
-    "id": "academic-replication-text-formula-edge-labels",
-    "profile": "academic-paper",
-    "prompt": "Replicate the uploaded academic figure into an editable bundle. Preserve caption, legend, formula block, standalone text boxes, and edge labels with their relative positions."
-  },
-  {
-    "id": "academic-image-improvement-preview-gate",
-    "profile": "academic-paper",
-    "prompt": "Redraw the uploaded framework screenshot as a cleaner journal figure. Improve the hierarchy and academic tone, but preserve the visible caption, legend, callouts, and edge labels. Use a visual concept preview before final draw.io if that helps, then deliver editable .drawio and .svg with sidecars in a work directory."
-  },
-  {
-    "id": "academic-desktop-png-pdf-unavailable-fallback",
-    "profile": "academic-paper",
-    "prompt": "Export the final paper figure as PNG and PDF for submission, but draw.io Desktop might not be installed."
-  }
-]

package/template/.claude/skills/drawio-academic-skills/evals/darwin-results.tsv

@@ -1,3 +0,0 @@
-timestamp	commit	skill	old_score	new_score	status	dimension	note	eval_mode
-2026-04-27T11:15:25+08:00	baseline-agent	drawio-academic-skills	-	82.8	baseline	-	Independent verifier baseline; weakest dimensions were checkpoint design, boundary coverage, and Desktop fallback clarity	dry_run
-2026-04-27T11:15:25+08:00	working-tree	drawio-academic-skills	82.8	89.2	keep	boundary-coverage	Added non-negotiable offline/MCP-free contract, preflight, edit round-trip, Desktop fallback, failure recovery, completion report, and regression assertions	dry_run

package/template/.claude/skills/drawio-academic-skills/evals/evals.json

@@ -1,228 +0,0 @@
-{
-  "skill_name": "drawio-academic-skills",
-  "version": "2.7.0",
-  "_runner": "No automated runner. Each eval is a prompt plus an assertion checklist; verify manually or with an agent, assertion by assertion.",
-  "evals": [
-    {
-      "id": "academic-ieee-campus-network",
-      "prompt": "Create an IEEE-style campus network paper figure with core, distribution, and access layers in grayscale. Return the final .drawio and .svg, with sidecars in a work directory.",
-      "expected_output": "A grayscale-safe IEEE campus network figure generated through the sibling base CLI with clean final outputs.",
-      "files": [],
-      "assertions": [
-        "Uses drawio-academic-skills overlay policy",
-        "Calls or references sibling ../drawio for CLI execution",
-        "Sets meta.profile to academic-paper",
-        "Sets meta.figureType to architecture",
-        "Includes caption or legend guidance for IEEE-style symbols"
-      ]
-    },
-    {
-      "id": "academic-research-workflow-paper",
-      "prompt": "Create a research workflow figure for a manuscript showing data collection, preprocessing, modeling, validation, and reporting.",
-      "expected_output": "A publication-ready workflow figure with default final .drawio and .svg outputs.",
-      "files": [],
-      "assertions": [
-        "Sets meta.figureType to workflow",
-        "Uses academic or academic-color theme based on color policy",
-        "Default final deliverables are .drawio and .svg, with .spec.yaml and .arch.json in a work directory",
-        "Does not require MCP or live backend"
-      ]
-    },
-    {
-      "id": "academic-system-architecture-paper",
-      "prompt": "Create a system architecture paper figure with client, API, worker, and storage layers. Make it readable in a two-column paper.",
-      "expected_output": "A paper-facing architecture diagram with compact labels and publication checks.",
-      "files": ["skills/drawio-academic-skills/references/examples/system-architecture-paper.yaml"],
-      "assertions": [
-        "Sets meta.figureType to architecture",
-        "Uses concise labels before shrinking fonts",
-        "Preserves caption-ready title and one-sentence description",
-        "Runs sibling base CLI validation with strict warnings or equivalent"
-      ]
-    },
-    {
-      "id": "academic-yolo-model-architecture",
-      "prompt": "Create a paper-ready YOLO-style object detection architecture figure. Show input image, backbone, neck/fusion, detection heads, and loss/output. Use editable draw.io primitives, compact labels, and deliver .drawio plus .svg with sidecars in a work directory.",
-      "expected_output": "An academic model-architecture figure using modules and deep-learning semantic types rather than generic boxes.",
-      "files": ["skills/drawio-academic-skills/references/examples/yolo-model-architecture-paper.yaml"],
-      "assertions": [
-        "Uses drawio-academic-skills overlay policy for the publication-facing request",
-        "Sets meta.profile to academic-paper and meta.figureType to architecture",
-        "Uses modules for stages such as input, backbone, fusion or neck, head, and loss/output",
-        "Uses deep-learning semantic node types such as input, conv, pool, attention, tensor3d, loss, and output",
-        "Keeps labels compact and uses a legend or caption instead of long prose inside layer blocks",
-        "Delivers final .drawio and .svg, with .spec.yaml and .arch.json in .drawio-tmp/<name>/"
-      ]
-    },
-    {
-      "id": "academic-max-pooling-operation-figure",
-      "prompt": "Create a publication-ready max-pooling operation figure using native draw.io cells. Show a 2 x 2 input window, the max operation, the output value, a short formula, and arrow labels that do not overlap connector lines.",
-      "expected_output": "A compact academic operation figure built from native grid cells, formula/text nodes, and offset connector labels.",
-      "files": ["skills/drawio-academic-skills/references/examples/max-pooling-operation-paper.yaml"],
-      "assertions": [
-        "Sets meta.profile to academic-paper and maps the operation to an existing meta.figureType value",
-        "Builds the grid from native editable draw.io cells instead of embedding a raster image",
-        "Uses explicit bounds for grid cells, formula, and callout or label placement",
-        "Uses supported math delimiters for the formula",
-        "Uses labelOffset or equivalent placement so edge labels sit off connector lines",
-        "Verifies exported SVG or Desktop-exported artifacts before any browser screenshot"
-      ]
-    },
-    {
-      "id": "academic-ablation-pipeline",
-      "prompt": "Create an ablation-study figure comparing a baseline and two variants before a shared evaluation block for a conference paper.",
-      "expected_output": "A workflow-style ablation pipeline suitable for publication.",
-      "files": [],
-      "assertions": [
-        "Sets meta.figureType to workflow",
-        "Shows baseline and at least two variant branches",
-        "Branches converge at shared evaluation",
-        "Includes legend or caption guidance when line styles or colors encode meaning"
-      ]
-    },
-    {
-      "id": "academic-paper-evidence-chain-preview",
-      "prompt": "I have a draft optimization paper about traffic-signal control. Build a publication figure from the paper logic, not just a list of sections: problem gap, sensor data, assumptions, multi-agent controller, simulation scenarios, metrics, results, and contribution. Use an image-generation concept preview if appropriate, but don't send raw unpublished text externally without asking.",
-      "expected_output": "A paper-derived academic figure workflow that extracts the research evidence chain, confirms a diagram plan, optionally uses privacy-gated image preview, then renders editable draw.io artifacts.",
-      "files": [],
-      "assertions": [
-        "Identifies the source as a paper-derived figure and extracts a research evidence chain",
-        "Maps the figure to an existing meta.figureType value rather than inventing a new schema field",
-        "Presents a diagram plan for confirmation before rendering",
-        "Uses optional image-generation preview only after plan confirmation and privacy approval",
-        "Keeps YAML as the canonical source and final .drawio/.svg as the authoritative artifacts"
-      ]
-    },
-    {
-      "id": "academic-thesis-word-a4-bundle",
-      "prompt": "Create an A4-safe thesis figure for Word export. Deliver the editable bundle plus SVG, and include PNG only if draw.io Desktop is available.",
-      "expected_output": "An academic bundle with Word/A4 export policy and honest Desktop fallback.",
-      "files": [],
-      "assertions": [
-        "Performs venue/audience preflight for thesis or Word",
-        "Default final deliverables include .drawio and .svg, with sidecars in a work directory",
-        "Treats PNG as optional Desktop-enhanced export",
-        "Reports missing PNG clearly if Desktop is unavailable"
-      ]
-    },
-    {
-      "id": "academic-formula-publication-figure",
-      "prompt": "Create a publication-ready training pipeline figure with a visible loss formula $$L = -\\sum y_i \\log(\\hat{y}_i)$$ and an inline metric note \\(F_1\\).",
-      "expected_output": "A formula-bearing academic workflow figure with formula and text fidelity checks.",
-      "files": [],
-      "assertions": [
-        "Loads or follows math-typesetting guidance from sibling base",
-        "Uses only official math delimiters",
-        "Keeps formulas readable and unclipped",
-        "Sets meta.profile to academic-paper and meta.figureType to workflow"
-      ]
-    },
-    {
-      "id": "academic-replication-text-formula-edge-labels",
-      "prompt": "Replicate the uploaded academic figure into an editable bundle. Preserve caption, legend, formula block, standalone text boxes, and edge labels with their relative positions.",
-      "expected_output": "An academic replication bundle with explicit text placement and label offsets.",
-      "files": ["skills/drawio/evals/fixtures/replicate-academic-highlight.svg"],
-      "assertions": [
-        "Sets meta.source to replicated",
-        "Sets meta.profile to academic-paper",
-        "Uses explicit bounds for standalone text, captions, formulas, or callouts when placement matters",
-        "Uses labelOffset for connector labels that would otherwise sit on lines",
-        "Records a visual/text-position self-check before completion",
-        "Uses exported SVG or Desktop-exported artifacts for visual verification before any browser screenshot"
-      ]
-    },
-    {
-      "id": "academic-reference-redraw-native-scientific",
-      "prompt": "Redraw the uploaded research framework screenshot as an editable scientific draw.io figure. Preserve section labels, caption, legend, formulas, callouts, and connector labels, but rebuild the main diagram as native cells rather than pasting the screenshot as the page.",
-      "expected_output": "A scientific reference redraw workflow with source inventory, native editable cells, explicit text placement, and exported-artifact verification.",
-      "files": ["skills/drawio/evals/fixtures/replicate-academic-highlight.svg"],
-      "assertions": [
-        "Sets meta.source to replicated and meta.profile to academic-paper",
-        "Creates or presents a source inventory for canvas, regions, shapes, text, formulas, connectors, palette, and uncertainties",
-        "Uses native draw.io shapes, text/formula nodes, modules, waypoints, and labelOffset for the main figure",
-        "Does not embed the uploaded reference image as the final full-page draw.io content",
-        "Preserves captions, legends, formulas, callouts, and connector labels as first-class elements",
-        "Uses exported SVG or Desktop-exported artifacts for visual verification before any browser screenshot"
-      ]
-    },
-    {
-      "id": "academic-image-improvement-preview-gate",
-      "prompt": "Redraw the uploaded framework screenshot as a cleaner journal figure. Improve the hierarchy and academic tone, but preserve the visible caption, legend, callouts, and edge labels. Use a visual concept preview before final draw.io if that helps, then deliver editable .drawio and .svg with sidecars in a work directory.",
-      "expected_output": "An academic image-improvement workflow that confirms extracted structure, uses optional image preview for layout approval, then verifies exported draw.io artifacts.",
-      "files": ["skills/drawio/evals/fixtures/replicate-academic-highlight.svg"],
-      "assertions": [
-        "Confirms ambiguous source text or extracted structure before final rendering",
-        "Uses optional image-generation preview for academic improvement or layout exploration when available",
-        "Falls back to local YAML/SVG preview when image generation is unavailable or declined",
-        "Uses explicit bounds or labelOffset for captions, callouts, formulas, or connector labels when placement matters",
-        "Performs one exported-artifact QA pass and rerenders once if visible defects are found"
-      ]
-    },
-    {
-      "id": "academic-desktop-png-pdf-unavailable-fallback",
-      "prompt": "Export the final paper figure as PNG and PDF for submission, but draw.io Desktop might not be installed.",
-      "expected_output": "A publication workflow that tries Desktop exports when needed and falls back honestly.",
-      "files": [],
-      "assertions": [
-        "Attempts PNG/PDF only through sibling base Desktop-enhanced export",
-        "Does not require MCP or a live backend",
-        "Does not claim PNG/PDF files exist when Desktop is unavailable",
-        "Still delivers final .drawio and .svg, with sidecars in a work directory",
-        "Provides a diagrams.net URL or exact Desktop command fallback",
-        "Does not substitute Playwright screenshots for unavailable Desktop exports"
-      ]
-    },
-    {
-      "id": "academic-ieee-print-palette",
-      "prompt": "Create an IEEE camera-ready workflow figure for single-column print. I have not selected a palette.",
-      "expected_output": "An academic preflight that recommends an IEEE print-safe palette, records it independently from the theme, and passes the print gate.",
-      "files": [],
-      "assertions": [
-        "Determines the IEEE print venue before asking one palette question",
-        "Offers ieee-bw first with (Recommended), followed by relevant alternatives such as tol-high-contrast and ieee-color",
-        "States colorblind and grayscale safety in the option descriptions",
-        "Sets meta.palette to the selected palette and meta.print.target to ieee-single",
-        "Uses the academic theme for typography and layout independently from palette colors",
-        "Runs strict validation and reports the selected palette plus its safety flags"
-      ]
-    },
-    {
-      "id": "academic-explicit-palette",
-      "prompt": "Create a Nature-style online journal figure using the journal-npg palette. This is a color PDF, not a grayscale print deliverable.",
-      "expected_output": "An academic workflow that applies the explicitly named palette without asking again and reports its accessibility metadata.",
-      "files": [],
-      "assertions": [
-        "Maps journal-npg directly to meta.palette and does not ask a palette-selection question",
-        "Keeps academic theme typography, layout, shapes, and line styles independent from the palette",
-        "Surfaces PALETTE_CVD_NOTICE as non-blocking info because journal-npg is not colorblind-safe",
-        "Does not invent a grayscale print requirement for the explicitly online color deliverable",
-        "Names journal-npg and its colorblind and grayscale safety flags in the completion report"
-      ]
-    },
-    {
-      "id": "academic-print-gate-downgrade",
-      "prompt": "Create an IEEE single-column camera-ready workflow figure using the morandi palette.",
-      "expected_output": "An academic print workflow that honors the explicit palette request, surfaces the grayscale print risk, and recommends a print-safe downgrade.",
-      "files": [],
-      "assertions": [
-        "Maps morandi directly to meta.palette and does not ask a palette-selection question",
-        "Sets meta.print.target to ieee-single for the camera-ready deliverable",
-        "Surfaces PALETTE_PRINT_GATE because morandi is not grayscale-safe for the print target",
-        "Recommends downgrading to ieee-bw or tol-high-contrast, or keeps the strict validation failure explicit",
-        "Reports morandi's colorblind and grayscale safety flags in the completion report"
-      ]
-    },
-    {
-      "id": "academic-base-capability-promotion",
-      "prompt": "Turn the supplied multi-page architecture bundle into a paper-ready figure set, using the sibling base offline postprocess summary before applying publication checks.",
-      "expected_output": "A publication-checked bundle that consumes base multi-page and postprocess contracts without duplicating runtime.",
-      "files": ["skills/drawio/scripts/postprocess/fixtures/bundle.yaml"],
-      "assertions": [
-        "Uses sibling base canonical bundle and postprocess behavior",
-        "Applies academic caption, print, and readability checks after the base transform",
-        "Does not copy adapters, identity, renderer, catalogs, or postprocess runtime into the overlay",
-        "Keeps Desktop and model evidence classifications honest"
-      ]
-    }
-  ]
-}

package/template/.claude/skills/drawio-academic-skills/evals/test-prompts.json

@@ -1,17 +0,0 @@
-[
-  {
-    "id": "overlay-sibling-base-required",
-    "prompt": "Use drawio-academic-skills to create a journal figure when ../drawio is installed beside it.",
-    "expected": "Routes through overlay policy and executes shared CLI from ../drawio/scripts/cli.js."
-  },
-  {
-    "id": "overlay-no-mcp",
-    "prompt": "Create a publication-ready figure without configuring MCP.",
-    "expected": "Does not create .mcp.json or require any live backend."
-  },
-  {
-    "id": "overlay-desktop-fallback",
-    "prompt": "Export PDF/PNG if possible, but Desktop may be missing.",
-    "expected": "Delivers final .drawio/.svg, keeps .spec.yaml/.arch.json in a work directory, and reports unavailable Desktop exports honestly."
-  }
-]

package/template/.claude/skills/drawio-academic-skills/references/docs/academic-export-checklist.md

@@ -1,45 +0,0 @@
-# Academic Export Checklist
-
-Use this checklist for `meta.profile: academic-paper`.
-
-## Required
-
-- `meta.figureType` is present and is `architecture`, `roadmap`, or `workflow`.
-- `meta.title` is present and suitable for figure captioning.
-- Theme is `academic` or `academic-color`.
-- Output bundle includes `.drawio`, `.spec.yaml`, `.arch.json`, and a 300dpi `.png` (falls back to `.svg` when draw.io Desktop is unavailable).
-- All formulas use the math typesetting guidance.
-- Colors are not the only carrier of meaning.
-- Visual checks use the exported PNG (or fallback SVG) or Desktop-exported final artifact before any browser/live screenshot.
-
-## Recommended
-
-- `meta.description` explains the figure intent or context.
-- `meta.legend` is present when icons or mixed connector styles are used.
-- Label font classes stay uniform (module title 22 / node 20 / edge label 18 / text 16 by default); manual `style.fontSize` overrides stay class-consistent and inside their boxes.
-- Extra whitespace is cropped before final export.
-- Line styles, node sizes, and stroke widths are consistent across the figure.
-- The default 300dpi `.png` covers thesis, A4, Word, and raster-first workflows (draw.io Desktop required; falls back to SVG when absent).
-- For Word/thesis delivery prefer a Desktop-exported PNG; SVG text needs Times New Roman and SimSun installed on the viewing machine.
-- IEEE vector submissions accept PS/EPS/PDF only (no SVG); attach a Desktop-exported PDF when targeting IEEE.
-
-## Print Sizing
-
-Labels print at `fontSize x print-width-pt / canvas-width-px` pt when the figure fills the target width (cn-thesis text block = 440pt, IEEE single column = 252pt, double column = 516pt). Keep the result at 9pt (CN) / 8pt (IEEE) or higher. Minimum label fontSize:
-
-| Canvas width | cn-thesis (440pt/9pt) | Single column (252pt/8pt) | Double column (516pt/8pt) |
-| ------------ | --------------------- | ------------------------- | ------------------------- |
-| 630px        | 13                    | 20                        | 10                        |
-| 1000px       | 21                    | 32                        | 16                        |
-| 1200px       | 25                    | 39                        | 19                        |
-| 1600px       | 33                    | 51                        | 25                        |
-
-Set `meta.print: { target: cn-thesis | ieee-single | ieee-double }` (or custom `widthPt`/`minPt`) so the validator checks the figure; without it, only canvases wider than 1500px are checked against the IEEE single-column floor. Design the canvas for the target width instead of scaling down a wide drawing.
-
-## Review Questions
-
-- Is the figure still readable when inserted into an A4 thesis or paper page at normal zoom?
-- Would this still be readable when printed in grayscale?
-- Does the figure still make sense if the reader cannot distinguish red vs green?
-- Are caption, legend, and abbreviations clear without the surrounding paragraph?
-- For journal / IEEE submission, did you export vector (PDF/EPS) **explicitly** rather than relying on the default raster PNG?