create-fullstack-scaffold 0.1.0

package/README.md

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+# create-biomimic-app
+
+A full-stack React + Hono application template with TypeScript, demonstrating best practices for monorepo-style architecture with single-port development.
+
+## Features
+
+- **Frontend**: React with TypeScript, Vite
+- **Backend**: Hono with TypeScript
+- **Database**: SQLite with Drizzle ORM
+- **State Management**: Zustand
+- **Real-time**: WebSocket + SSE support
+- **Testing**: Vitest (unit + integration tests)
+- **Code Quality**: ESLint, Prettier, pre-commit hooks
+- **Type Safety**: End-to-end type safety with Hono RPC
+
+## Architecture
+
+```
+src/
+├── client/          # React frontend
+│   ├── components/  # UI components
+│   ├── stores/     # Zustand state management
+│   ├── services/    # API clients (apiClient)
+│   ├── hooks/      # Custom hooks
+│   ├── pages/      # Page components
+│   └── App.tsx
+├── server/          # Hono backend
+│   ├── module-todos/     # Todo module
+│   ├── module-chat/      # WebSocket chat module
+│   ├── module-notifications/ # SSE notifications module
+│   ├── core/             # Core services (runtime, realtime)
+│   ├── middleware/       # Express middleware
+│   ├── test-utils/       # Test utilities
+│   └── entries/          # Entry points (node.ts, cloudflare.ts)
+└── shared/              # Shared types
+    ├── core/             # Framework layer (ws-client, sse-client)
+    ├── modules/          # Business layer (chat, todos, notifications)
+    └── schemas/          # Unified exports
+```
+
+## Getting Started
+
+### Installation
+
+```bash
+npm install
+```
+
+### Development
+
+```bash
+npm run dev
+```
+
+The application will be available at http://localhost:3010
+
+### Build
+
+```bash
+npm run build
+```
+
+### Testing
+
+```bash
+# Run all tests
+npm test
+
+# Run unit tests only
+npm run test:unit
+
+# Run integration tests only
+npm run test:integration
+```
+
+## Key Concepts
+
+### Path Aliases
+
+- `@shared/*` → src/shared/\*
+- `@client/*` → src/client/\*
+- `@server/*` → src/server/\*
+
+### Single-Port Development
+
+Uses "@hono/vite-dev-server" to run both frontend and backend on port 3010.
+
+### Framework Layer vs Business Layer
+
+The project has clear separation between framework and business layers:
+
+- **Framework Layer** (`src/shared/core/`): Generic, reusable infrastructure
+- **Business Layer** (`src/shared/modules/`): Business-specific schemas and protocols
+
+### Hono RPC
+
+Provides type-safe API calls from frontend to backend:
+
+```typescript
+import { apiClient } from '@client/services/apiClient'
+
+// HTTP API
+const response = await apiClient.api.todos.$get()
+const result = await response.json()
+
+// WebSocket
+const ws = apiClient.api.chat.ws.$ws()
+const result = await ws.call('echo', { message: 'hello' })
+
+// SSE
+const conn = await apiClient.api.notifications.stream.$sse()
+conn.on('notification', n => console.log(n))
+```
+
+### Real-time Features
+
+| Feature   | Method              | Type Safety | Testing          |
+| --------- | ------------------- | ----------- | ---------------- |
+| HTTP API  | `$get()`, `$post()` | ✅          | No server needed |
+| WebSocket | `$ws()`             | ✅          | Requires server  |
+| SSE       | `$sse()`            | ✅          | No server needed |
+
+### Module Structure
+
+Backend is organized by feature modules:
+
+- `module-todos/` - Todo CRUD
+- `module-chat/` - WebSocket chat
+- `module-notifications/` - SSE notifications
+
+Each module contains:
+
+- `routes/` - API endpoints
+- `services/` - Business logic
+- `__tests__/` - Unit tests
+
+## Pre-commit Hooks
+
+The project uses Husky for Git hooks:
+
+- **lint-staged** - Format staged files
+- **npm test** - Run test suite
+- **validate-all** - Custom validation script
+
+## Environment Variables
+
+See `.env.example` for required environment variables.
+
+## Documentation
+
+- `QUICKSTART.md` - Quick start guide
+- `DESIGN.md` - Technical architecture
+- `CLAUDE.md` - Development guidelines
+- `.claude/rules/` - Detailed development constraints

package/dist/cli/index.d.ts

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+
+export {  }

package/dist/cli/index.js

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+#!/usr/bin/env node
+import { program } from 'commander';
+import { hc } from 'hono/client';
+import { z } from '@hono/zod-openapi';
+import fs from 'fs';
+import path from 'path';
+import os from 'os';
+
+function createRPCClient(baseUrl) {
+  return hc(baseUrl);
+}
+
+// src/cli/utils/api.ts
+var DEFAULT_BASE_URL = "http://localhost:3010";
+var globalBaseUrl = process.env.BIOMIMIC_API_URL || DEFAULT_BASE_URL;
+function setBaseUrl(url) {
+  globalBaseUrl = url;
+}
+function getBaseUrl() {
+  return globalBaseUrl;
+}
+function getClient() {
+  return createRPCClient(globalBaseUrl);
+}
+
+// src/cli/utils/logger.ts
+var Logger = class {
+  level = "info";
+  constructor(options = {}) {
+    if (options.debug || process.env.BIOMIMIC_DEBUG === "true") {
+      this.level = "debug";
+    } else if (options.verbose || process.env.BIOMIMIC_VERBOSE === "true") {
+      this.level = "info";
+    }
+  }
+  setLevel(level) {
+    this.level = level;
+  }
+  shouldLog(level) {
+    const levels = ["silent", "error", "warn", "info", "debug"];
+    return levels.indexOf(level) <= levels.indexOf(this.level);
+  }
+  info(message, ...args) {
+    if (this.shouldLog("info")) {
+      process.stdout.write(`${message}${args.length ? " " + args.join(" ") : ""}
+`);
+    }
+  }
+  debug(message, ...args) {
+    if (this.shouldLog("debug")) {
+      process.stdout.write(`[debug] ${message}${args.length ? " " + args.join(" ") : ""}
+`);
+    }
+  }
+  warn(message) {
+    if (this.shouldLog("warn")) {
+      process.stderr.write(`[warn] ${message}
+`);
+    }
+  }
+  error(message) {
+    if (this.shouldLog("error")) {
+      process.stderr.write(`[error] ${message}
+`);
+    }
+  }
+  success(message, ...args) {
+    if (this.shouldLog("info")) {
+      process.stdout.write(`\u2713 ${message}${args.length ? " " + args.join(" ") : ""}
+`);
+    }
+  }
+  fail(message) {
+    if (this.shouldLog("error")) {
+      process.stderr.write(`\u2717 ${message}
+`);
+    }
+  }
+};
+var logger = null;
+function createLogger(options = {}) {
+  logger = new Logger(options);
+  return logger;
+}
+function getLogger() {
+  if (!logger) {
+    logger = new Logger();
+  }
+  return logger;
+}
+
+// src/cli/utils/auto-command.ts
+function extractZodInfo(schema) {
+  const def = schema._def;
+  if (def.typeName === "ZodOptional") {
+    const inner = schema._def.innerType;
+    const info = extractZodInfo(inner);
+    return { ...info, required: false };
+  }
+  if (def.typeName === "ZodDefault") {
+    const innerDef = schema._def;
+    const defaultValue = innerDef.defaultValue();
+    const info = extractZodInfo(innerDef.innerType);
+    return { ...info, required: false, defaultValue };
+  }
+  if (def.typeName === "ZodEnum") {
+    const enumValues = [...schema._def.values];
+    return { type: "enum", required: true, enumValues };
+  }
+  if (def.typeName === "ZodString") return { type: "string", required: true };
+  if (def.typeName === "ZodNumber") return { type: "number", required: true };
+  if (def.typeName === "ZodBoolean") return { type: "boolean", required: true };
+  if (def.typeName === "ZodObject") return { type: "object", required: true };
+  return { type: "string", required: true };
+}
+function schemaToOptions(schema) {
+  const options = [];
+  const shape = schema.shape;
+  for (const [key, zodType] of Object.entries(shape)) {
+    const info = extractZodInfo(zodType);
+    const longFlag = key.replace(/([A-Z])/g, "-$1").toLowerCase();
+    let flags = `--${longFlag} <value>`;
+    if (info.type === "boolean") {
+      flags = `--${longFlag}`;
+    }
+    let description = String(info.type);
+    if (info.enumValues) {
+      description = `${info.type} (${info.enumValues.join("|")})`;
+    }
+    options.push({
+      flags,
+      description,
+      required: info.required,
+      defaultValue: info.defaultValue
+    });
+  }
+  return options;
+}
+function pathToApiCall(client, _method, path2) {
+  const pathParts = path2.split("/").filter(Boolean);
+  let current = client.api;
+  for (const part of pathParts) {
+    if (part.startsWith("{") && part.endsWith("}")) {
+      continue;
+    }
+    current = current[part] || current[`:${part}`];
+  }
+  return current;
+}
+function createCommandFromRoute(config) {
+  const options = [];
+  const arguments_ = [];
+  if (config.params) {
+    const shape = config.params.shape;
+    for (const [key] of Object.entries(shape)) {
+      arguments_.push({
+        name: key,
+        description: `${key} parameter`,
+        required: true
+      });
+    }
+  }
+  if (config.body) {
+    const bodySchema = config.body;
+    if (bodySchema.shape) {
+      options.push(...schemaToOptions(bodySchema) || []);
+    }
+  }
+  if (config.query) {
+    options.push(...schemaToOptions(config.query) || []);
+  }
+  return {
+    name: config.command,
+    description: config.description,
+    options,
+    arguments: arguments_,
+    action: async (opts, args) => {
+      const logger2 = getLogger();
+      const client = getClient();
+      const param = {};
+      if (config.params) {
+        const shape = config.params.shape;
+        const keys = Object.keys(shape);
+        keys.forEach((key, i) => {
+          param[key] = args[i] || String(opts[key]);
+        });
+      }
+      const json = {};
+      if (config.body && opts) {
+        const bodySchema = config.body;
+        if (bodySchema.shape) {
+          const shape = bodySchema.shape;
+          for (const key of Object.keys(shape)) {
+            if (opts[key] !== void 0) {
+              json[key] = opts[key];
+            }
+          }
+        }
+      }
+      const query = {};
+      if (config.query && opts) {
+        const shape = config.query.shape;
+        for (const key of Object.keys(shape)) {
+          if (opts[key] !== void 0) {
+            query[key] = String(opts[key]);
+          }
+        }
+      }
+      const apiCall = pathToApiCall(client, config.method, config.path);
+      const methodCall = apiCall[`$${config.method.charAt(0).toUpperCase() + config.method.slice(1)}`] || apiCall.$get;
+      const res = await methodCall.call(apiCall, {
+        param: Object.keys(param).length > 0 ? param : void 0,
+        query: Object.keys(query).length > 0 ? query : void 0,
+        json: Object.keys(json).length > 0 ? json : void 0
+      });
+      const data = await res.json();
+      logger2.info(JSON.stringify(data, null, 2));
+    }
+  };
+}
+function registerAutoCommand(program2, config) {
+  const cmd = createCommandFromRoute(config);
+  const command = program2.command(cmd.name).description(cmd.description).action(async (firstArg, opts) => {
+    const args = typeof firstArg === "string" ? [firstArg] : [];
+    const options = (typeof firstArg === "object" ? firstArg : opts) || {};
+    await cmd.action(options, args);
+  });
+  cmd.options?.forEach((opt) => {
+    if (opt.required) {
+      command.requiredOption(opt.flags, opt.description, opt.defaultValue);
+    } else {
+      command.option(opt.flags, opt.description, opt.defaultValue);
+    }
+  });
+  cmd.arguments?.forEach((arg) => {
+    command.argument(arg.required ? `<${arg.name}>` : `[${arg.name}]`, arg.description);
+  });
+}
+var TodoStatusSchema = z.enum(["pending", "in_progress", "completed"]);
+var todoRoutes = [
+  {
+    method: "get",
+    path: "/todos",
+    command: "list",
+    description: "List all todos"
+  },
+  {
+    method: "get",
+    path: "/todos/{id}",
+    command: "get",
+    description: "Get a todo by ID",
+    params: z.object({ id: z.string() })
+  },
+  {
+    method: "post",
+    path: "/todos",
+    command: "create",
+    description: "Create a new todo",
+    body: z.object({
+      title: z.string().min(1),
+      description: z.string().optional()
+    })
+  },
+  {
+    method: "put",
+    path: "/todos/{id}",
+    command: "update",
+    description: "Update a todo",
+    params: z.object({ id: z.string() }),
+    body: z.object({
+      title: z.string().optional(),
+      description: z.string().optional(),
+      status: TodoStatusSchema.optional()
+    })
+  },
+  {
+    method: "delete",
+    path: "/todos/{id}",
+    command: "delete",
+    description: "Delete a todo",
+    params: z.object({ id: z.string() })
+  }
+];
+function registerTodoCommands(program2) {
+  const todo = program2.command("todo").description("Todo management commands");
+  for (const route of todoRoutes) {
+    registerAutoCommand(todo, route);
+  }
+}
+
+// src/cli/modules/notification/index.ts
+function registerNotificationCommands(program2) {
+  const notification = program2.command("notification").description("Notification management commands");
+  notification.command("list").description("List all notifications").option("--unread-only", "Show only unread notifications").option("--limit <number>", "Limit number of results", "20").action(async (options) => {
+    const logger2 = getLogger();
+    const client = getClient();
+    const unreadOnly = Boolean(options.unreadOnly);
+    const limit = parseInt(options.limit || "20");
+    const res = await client.api.notifications.$get({
+      query: { unreadOnly: String(unreadOnly), limit: String(limit) }
+    });
+    const data = await res.json();
+    logger2.info(JSON.stringify(data, null, 2));
+  });
+  notification.command("create").description("Create a new notification").requiredOption("-t, --title <title>", "Notification title").requiredOption("-m, --message <message>", "Notification message").option("--type <type>", "Notification type (info|warning|success|error)", "info").action(async (options) => {
+    const logger2 = getLogger();
+    const client = getClient();
+    const res = await client.api.notifications.$post({
+      json: {
+        type: options.type,
+        title: options.title,
+        message: options.message
+      }
+    });
+    const data = await res.json();
+    logger2.success("Notification created");
+    logger2.info(JSON.stringify(data, null, 2));
+  });
+  notification.command("unread-count").description("Get unread notification count").action(async () => {
+    const logger2 = getLogger();
+    const client = getClient();
+    const res = await client.api.notifications["unread-count"].$get();
+    const data = await res.json();
+    logger2.info(JSON.stringify(data, null, 2));
+  });
+  notification.command("mark-read").description("Mark a notification as read").argument("<id>", "Notification ID").action(async (id) => {
+    const logger2 = getLogger();
+    const client = getClient();
+    const res = await client.api.notifications[":id"].read.$patch({ param: { id } });
+    const data = await res.json();
+    logger2.success("Notification marked as read");
+    logger2.info(JSON.stringify(data, null, 2));
+  });
+  notification.command("delete").description("Delete a notification").argument("<id>", "Notification ID").action(async (id) => {
+    const logger2 = getLogger();
+    const client = getClient();
+    const res = await client.api.notifications[":id"].$delete({ param: { id } });
+    const data = await res.json();
+    logger2.success("Notification deleted");
+    logger2.info(JSON.stringify(data, null, 2));
+  });
+}
+var CONFIG_DIR = path.join(os.homedir(), ".biomimic");
+var CONFIG_FILE = path.join(CONFIG_DIR, "config.json");
+function loadConfig() {
+  try {
+    if (fs.existsSync(CONFIG_FILE)) {
+      const content = fs.readFileSync(CONFIG_FILE, "utf-8");
+      return JSON.parse(content);
+    }
+  } catch {
+  }
+  return { baseUrl: "http://localhost:3010" };
+}
+function saveConfig(config) {
+  if (!fs.existsSync(CONFIG_DIR)) {
+    fs.mkdirSync(CONFIG_DIR, { recursive: true });
+  }
+  fs.writeFileSync(CONFIG_FILE, JSON.stringify(config, null, 2));
+}
+function registerConfigCommands(program2) {
+  const config = program2.command("config").description("CLI configuration and service management");
+  config.command("get").description("Show current configuration").option("-k, --key <key>", "Get specific config key").action((options) => {
+    const logger2 = getLogger();
+    const cfg = loadConfig();
+    if (options.key) {
+      const value = cfg[options.key];
+      logger2.info(`${options.key}: ${value ?? "not set"}`);
+    } else {
+      logger2.info(JSON.stringify(cfg, null, 2));
+    }
+  });
+  config.command("set").description("Set configuration value").option("-u, --url <url>", "Set server URL").action((options) => {
+    const logger2 = getLogger();
+    const cfg = loadConfig();
+    if (options.url) {
+      cfg.baseUrl = options.url;
+      setBaseUrl(options.url);
+      logger2.success(`Server URL set to: ${options.url}`);
+    }
+    saveConfig(cfg);
+  });
+  config.command("url").description("Show or set server URL").argument("[url]", "New server URL").action((url) => {
+    const logger2 = getLogger();
+    if (url) {
+      const cfg = loadConfig();
+      cfg.baseUrl = url;
+      setBaseUrl(url);
+      saveConfig(cfg);
+      logger2.success(`Server URL set to: ${url}`);
+    } else {
+      logger2.info(`Current server URL: ${getBaseUrl()}`);
+    }
+  });
+  config.command("status").description("Check server connection status").action(async () => {
+    const logger2 = getLogger();
+    const client = getClient();
+    try {
+      const res = await client.health.$get();
+      const data = await res.json();
+      logger2.success("Server is reachable");
+      logger2.info(JSON.stringify(data, null, 2));
+    } catch (error) {
+      logger2.error(`Server not reachable: ${getBaseUrl()}`);
+      logger2.error(String(error));
+    }
+  });
+  config.command("reset").description("Reset configuration to defaults").action(() => {
+    const logger2 = getLogger();
+    const defaultConfig = { baseUrl: "http://localhost:3010" };
+    saveConfig(defaultConfig);
+    setBaseUrl(defaultConfig.baseUrl);
+    logger2.success("Configuration reset to defaults");
+  });
+  config.command("path").description("Show config file path").action(() => {
+    const logger2 = getLogger();
+    logger2.info(`Config file: ${CONFIG_FILE}`);
+  });
+}
+
+// src/cli/modules/index.ts
+function registerModules(program2) {
+  registerTodoCommands(program2);
+  registerNotificationCommands(program2);
+  registerConfigCommands(program2);
+}
+
+// src/cli/index.ts
+program.name("biomimic").description("Biomimic CLI - RPC service & code generation tools").version("0.1.0").option("-v, --verbose", "Enable verbose output").option("-u, --url <url>", "Server URL", "http://localhost:3010").hook("preAction", (thisCommand) => {
+  const options = thisCommand.opts();
+  createLogger({ verbose: options.verbose });
+  if (options.url) {
+    setBaseUrl(options.url);
+  }
+});
+registerModules(program);
+program.parse();
+//# sourceMappingURL=index.js.map
+//# sourceMappingURL=index.js.map

package/dist/cli/index.js.map

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{ hc } from 'hono/client'\n\nexport function createRPCClient(baseUrl: string) {\n  return hc(baseUrl)\n}\n","import { createRPCClient } from '../rpc/client'\n\nconst DEFAULT_BASE_URL = 'http://localhost:3010'\n\nlet globalBaseUrl = process.env.BIOMIMIC_API_URL || DEFAULT_BASE_URL\n\nexport function setBaseUrl(url: string) {\n  globalBaseUrl = url\n}\n\nexport function getBaseUrl(): string {\n  return globalBaseUrl\n}\n\nexport function getClient() {\n  return createRPCClient(globalBaseUrl)\n}\n","type LogLevel = 'silent' | 'error' | 'warn' | 'info' | 'debug'\n\ninterface LoggerOptions {\n  verbose?: boolean\n  debug?: boolean\n}\n\nclass Logger {\n  private level: LogLevel = 'info'\n\n  constructor(options: LoggerOptions = {}) {\n    if (options.debug || process.env.BIOMIMIC_DEBUG === 'true') {\n      this.level = 'debug'\n    } else if (options.verbose || process.env.BIOMIMIC_VERBOSE === 'true') {\n      this.level = 'info'\n    }\n  }\n\n  setLevel(level: LogLevel) {\n    this.level 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' ' + args.join(' ') : ''}\\n`)\n    }\n  }\n\n  fail(message: string) {\n    if (this.shouldLog('error')) {\n      process.stderr.write(`✗ ${message}\\n`)\n    }\n  }\n}\n\nlet logger: Logger | null = null\n\nexport function createLogger(options: LoggerOptions = {}): Logger {\n  logger = new Logger(options)\n  return logger\n}\n\nexport function getLogger(): Logger {\n  if (!logger) {\n    logger = new Logger()\n  }\n  return logger\n}\n\nexport { Logger, type LogLevel, type LoggerOptions }\n","import { Command } from 'commander'\nimport type { ZodType, ZodObject, ZodOptional } from 'zod'\nimport { getClient } from './api'\nimport { getLogger } from './logger'\n\ntype RouteConfig = {\n  method: 'get' | 'post' | 'put' | 'delete' | 'patch'\n  path: string\n  command: string\n  description: string\n  params?: ZodObject<Record<string, ZodType>>\n  body?: ZodType\n  query?: ZodObject<Record<string, ZodType>>\n}\n\ntype CliCommandConfig = {\n  name: string\n  description: string\n  action: (options: Record<string, unknown>, args: string[]) => Promise<void>\n  options?: Array<{\n    flags: string\n    description: string\n    required?: boolean\n    defaultValue?: string\n  }>\n  arguments?: Array<{\n    name: string\n    description: string\n    required?: boolean\n  }>\n}\n\nfunction extractZodInfo(schema: ZodType): {\n  type: 'string' | 'number' | 'boolean' | 'enum' | 'object'\n  required: boolean\n  enumValues?: string[]\n  defaultValue?: unknown\n} {\n  const def = (schema as unknown as { _def: { typeName: string } })._def\n\n  if (def.typeName === 'ZodOptional') {\n    const inner = (schema as ZodOptional<ZodType>)._def.innerType\n    const info = extractZodInfo(inner)\n    return { ...info, required: false }\n  }\n\n  if (def.typeName === 'ZodDefault') {\n    const innerDef = (\n      schema as unknown as { _def: { innerType: ZodType; defaultValue: () => unknown } }\n    )._def\n    const defaultValue = innerDef.defaultValue()\n    const info = extractZodInfo(innerDef.innerType)\n    return { ...info, required: false, defaultValue }\n  }\n\n  if (def.typeName === 'ZodEnum') {\n    const enumValues = [...(schema as unknown as { _def: { values: string[] } })._def.values]\n    return { type: 'enum', required: true, enumValues }\n  }\n\n  if (def.typeName === 'ZodString') return { type: 'string', required: true }\n  if (def.typeName === 'ZodNumber') return { type: 'number', required: true }\n  if (def.typeName === 'ZodBoolean') return { type: 'boolean', required: true }\n  if (def.typeName === 'ZodObject') return { type: 'object', required: true }\n\n  return { type: 'string', required: true }\n}\n\nfunction schemaToOptions(schema: ZodObject<Record<string, ZodType>>): CliCommandConfig['options'] {\n  const options: CliCommandConfig['options'] = []\n  const shape = schema.shape\n\n  for (const [key, zodType] of Object.entries(shape)) {\n    const info = extractZodInfo(zodType as ZodType)\n    const longFlag = key.replace(/([A-Z])/g, '-$1').toLowerCase()\n\n    let flags = `--${longFlag} <value>`\n    if (info.type === 'boolean') {\n      flags = `--${longFlag}`\n    }\n\n    let description: string = String(info.type)\n    if (info.enumValues) {\n      description = `${info.type} (${info.enumValues.join('|')})`\n    }\n\n    options.push({\n      flags,\n      description,\n      required: info.required,\n      defaultValue: info.defaultValue as string | undefined,\n    })\n  }\n\n  return options\n}\n\nfunction pathToApiCall(client: ReturnType<typeof getClient>, _method: string, path: string) {\n  const pathParts = path.split('/').filter(Boolean)\n  let current: unknown = client.api\n\n  for (const part of pathParts) {\n    if (part.startsWith('{') && part.endsWith('}')) {\n      continue\n    }\n    current =\n      (current as Record<string, unknown>)[part] || (current as Record<string, unknown>)[`:${part}`]\n  }\n\n  return current as Record<\n    string,\n    (args: {\n      param?: Record<string, string>\n      query?: Record<string, string>\n      json?: Record<string, unknown>\n    }) => Promise<Response>\n  >\n}\n\nexport function createCommandFromRoute(config: RouteConfig): CliCommandConfig {\n  const options: CliCommandConfig['options'] = []\n  const arguments_: CliCommandConfig['arguments'] = []\n\n  if (config.params) {\n    const shape = config.params.shape\n    for (const [key] of Object.entries(shape)) {\n      arguments_.push({\n        name: key,\n        description: `${key} parameter`,\n        required: true,\n      })\n    }\n  }\n\n  if (config.body) {\n    const bodySchema = config.body as ZodObject<Record<string, ZodType>>\n    if (bodySchema.shape) {\n      options.push(...(schemaToOptions(bodySchema) || []))\n    }\n  }\n\n  if (config.query) {\n    options.push(...(schemaToOptions(config.query) || []))\n  }\n\n  return {\n    name: config.command,\n    description: config.description,\n    options,\n    arguments: arguments_,\n    action: async (opts: Record<string, unknown>, args: string[]) => {\n      const logger = getLogger()\n      const client = getClient()\n\n      const param: Record<string, string> = {}\n      if (config.params) {\n        const shape = config.params.shape\n        const keys = Object.keys(shape)\n        keys.forEach((key, i) => {\n          param[key] = args[i] || String(opts[key])\n        })\n      }\n\n      const json: Record<string, unknown> = {}\n      if (config.body && opts) {\n        const bodySchema = config.body as ZodObject<Record<string, ZodType>>\n        if (bodySchema.shape) {\n          const shape = bodySchema.shape\n          for (const key of Object.keys(shape)) {\n            if (opts[key] !== undefined) {\n              json[key] = opts[key]\n            }\n          }\n        }\n      }\n\n      const query: Record<string, string> = {}\n      if (config.query && opts) {\n        const shape = config.query.shape\n        for (const key of Object.keys(shape)) {\n          if (opts[key] !== undefined) {\n            query[key] = String(opts[key])\n          }\n        }\n      }\n\n      const apiCall = pathToApiCall(client, config.method, config.path)\n      const methodCall =\n        apiCall[`$${config.method.charAt(0).toUpperCase() + config.method.slice(1)}`] ||\n        apiCall.$get\n\n      const res = await methodCall.call(apiCall, {\n        param: Object.keys(param).length > 0 ? param : undefined,\n        query: Object.keys(query).length > 0 ? query : undefined,\n        json: Object.keys(json).length > 0 ? json : undefined,\n      })\n\n      const data = await res.json()\n      logger.info(JSON.stringify(data, null, 2))\n    },\n  }\n}\n\nexport function registerAutoCommand(program: Command, config: RouteConfig) {\n  const cmd = createCommandFromRoute(config)\n\n  const command = program\n    .command(cmd.name)\n    .description(cmd.description)\n    .action(async (firstArg, opts) => {\n      const args = typeof firstArg === 'string' ? [firstArg] : []\n      const options = (typeof firstArg === 'object' ? firstArg : opts) || {}\n      await cmd.action(options, args)\n    })\n\n  cmd.options?.forEach(opt => {\n    if (opt.required) {\n      command.requiredOption(opt.flags, opt.description, opt.defaultValue)\n    } else {\n      command.option(opt.flags, opt.description, opt.defaultValue)\n    }\n  })\n\n  cmd.arguments?.forEach(arg => {\n    command.argument(arg.required ? `<${arg.name}>` : `[${arg.name}]`, arg.description)\n  })\n}\n\nexport { type RouteConfig, type CliCommandConfig }\n","import { Command } from 'commander'\nimport { registerAutoCommand, type RouteConfig } from '@cli/utils/auto-command'\nimport { z } from '@hono/zod-openapi'\n\nconst TodoStatusSchema = z.enum(['pending', 'in_progress', 'completed'])\n\nconst todoRoutes: RouteConfig[] = [\n  {\n    method: 'get',\n    path: '/todos',\n    command: 'list',\n    description: 'List all todos',\n  },\n  {\n    method: 'get',\n    path: '/todos/{id}',\n    command: 'get',\n    description: 'Get a todo by ID',\n    params: z.object({ id: z.string() }),\n  },\n  {\n    method: 'post',\n    path: '/todos',\n    command: 'create',\n    description: 'Create a new todo',\n    body: z.object({\n      title: z.string().min(1),\n      description: z.string().optional(),\n    }),\n  },\n  {\n    method: 'put',\n    path: '/todos/{id}',\n    command: 'update',\n    description: 'Update a todo',\n    params: z.object({ id: z.string() }),\n    body: z.object({\n      title: z.string().optional(),\n      description: z.string().optional(),\n      status: TodoStatusSchema.optional(),\n    }),\n  },\n  {\n    method: 'delete',\n    path: '/todos/{id}',\n    command: 'delete',\n    description: 'Delete a todo',\n    params: z.object({ id: z.string() }),\n  },\n]\n\nexport function registerTodoCommands(program: Command) {\n  const todo = program.command('todo').description('Todo management commands')\n\n  for (const route of todoRoutes) {\n    registerAutoCommand(todo, route)\n  }\n}\n\nexport { todoRoutes }\n","import { Command } from 'commander'\nimport { getClient } from '@cli/utils/api'\nimport { getLogger } from '@cli/utils/logger'\n\n// eslint-disable-next-line @typescript-eslint/no-explicit-any\ntype ApiClient = any\n\nexport function registerNotificationCommands(program: Command) {\n  const notification = program\n    .command('notification')\n    .description('Notification management commands')\n\n  notification\n    .command('list')\n    .description('List all notifications')\n    .option('--unread-only', 'Show only unread notifications')\n    .option('--limit <number>', 'Limit number of results', '20')\n    .action(async (options: { unreadOnly?: boolean; limit?: string }) => {\n      const logger = getLogger()\n      const client = getClient() as ApiClient\n      const unreadOnly = Boolean(options.unreadOnly)\n      const limit = parseInt(options.limit || '20')\n\n      const res = await client.api.notifications.$get({\n        query: { unreadOnly: String(unreadOnly), limit: String(limit) },\n      })\n      const data = await res.json()\n      logger.info(JSON.stringify(data, null, 2))\n    })\n\n  notification\n    .command('create')\n    .description('Create a new notification')\n    .requiredOption('-t, --title <title>', 'Notification title')\n    .requiredOption('-m, --message <message>', 'Notification message')\n    .option('--type <type>', 'Notification type (info|warning|success|error)', 'info')\n    .action(async (options: { title: string; message: string; type: string }) => {\n      const logger = getLogger()\n      const client = getClient() as ApiClient\n\n      const res = await client.api.notifications.$post({\n        json: {\n          type: options.type as 'info' | 'warning' | 'success' | 'error',\n          title: options.title,\n          message: options.message,\n        },\n      })\n      const data = await res.json()\n      logger.success('Notification created')\n      logger.info(JSON.stringify(data, null, 2))\n    })\n\n  notification\n    .command('unread-count')\n    .description('Get unread notification count')\n    .action(async () => {\n      const logger = getLogger()\n      const client = getClient() as ApiClient\n      const res = await client.api.notifications['unread-count'].$get()\n      const data = await res.json()\n      logger.info(JSON.stringify(data, null, 2))\n    })\n\n  notification\n    .command('mark-read')\n    .description('Mark a notification as read')\n    .argument('<id>', 'Notification ID')\n    .action(async (id: string) => {\n      const logger = getLogger()\n      const client = getClient() as ApiClient\n      const res = await client.api.notifications[':id'].read.$patch({ param: { id } })\n      const data = await res.json()\n      logger.success('Notification marked as read')\n      logger.info(JSON.stringify(data, null, 2))\n    })\n\n  notification\n    .command('delete')\n    .description('Delete a notification')\n    .argument('<id>', 'Notification ID')\n    .action(async (id: string) => {\n      const logger = getLogger()\n      const client = getClient() as ApiClient\n      const res = await client.api.notifications[':id'].$delete({ param: { id } })\n      const data = await res.json()\n      logger.success('Notification deleted')\n      logger.info(JSON.stringify(data, null, 2))\n    })\n}\n","import { Command } from 'commander'\nimport { getBaseUrl, setBaseUrl, getClient } from '@cli/utils/api'\nimport { getLogger } from '@cli/utils/logger'\nimport fs from 'fs'\nimport path from 'path'\nimport os from 'os'\n\nconst CONFIG_DIR = path.join(os.homedir(), '.biomimic')\nconst CONFIG_FILE = path.join(CONFIG_DIR, 'config.json')\n\ninterface Config {\n  baseUrl: string\n  stats?: {\n    totalCalls: number\n    lastCallAt?: string\n    commands?: Record<string, number>\n  }\n  [key: string]: string | number | boolean | undefined | Config['stats']\n}\n\nfunction loadConfig(): Config {\n  try {\n    if (fs.existsSync(CONFIG_FILE)) {\n      const content = fs.readFileSync(CONFIG_FILE, 'utf-8')\n      return JSON.parse(content)\n    }\n  } catch {\n    // ignore\n  }\n  return { baseUrl: 'http://localhost:3010' }\n}\n\nfunction saveConfig(config: Config) {\n  if (!fs.existsSync(CONFIG_DIR)) {\n    fs.mkdirSync(CONFIG_DIR, { recursive: true })\n  }\n  fs.writeFileSync(CONFIG_FILE, JSON.stringify(config, null, 2))\n}\n\nexport function registerConfigCommands(program: Command) {\n  const config = program.command('config').description('CLI configuration and service management')\n\n  config\n    .command('get')\n    .description('Show current configuration')\n    .option('-k, --key <key>', 'Get specific config key')\n    .action((options: { key?: string }) => {\n      const logger = getLogger()\n      const cfg = loadConfig()\n\n      if (options.key) {\n        const value = cfg[options.key]\n        logger.info(`${options.key}: ${value ?? 'not set'}`)\n      } else {\n        logger.info(JSON.stringify(cfg, null, 2))\n      }\n    })\n\n  config\n    .command('set')\n    .description('Set configuration value')\n    .option('-u, --url <url>', 'Set server URL')\n    .action((options: { url?: string }) => {\n      const logger = getLogger()\n      const cfg = loadConfig()\n\n      if (options.url) {\n        cfg.baseUrl = options.url\n        setBaseUrl(options.url)\n        logger.success(`Server URL set to: ${options.url}`)\n      }\n\n      saveConfig(cfg)\n    })\n\n  config\n    .command('url')\n    .description('Show or set server URL')\n    .argument('[url]', 'New server URL')\n    .action((url?: string) => {\n      const logger = getLogger()\n      if (url) {\n        const cfg = loadConfig()\n        cfg.baseUrl = url\n        setBaseUrl(url)\n        saveConfig(cfg)\n        logger.success(`Server URL set to: ${url}`)\n      } else {\n        logger.info(`Current server URL: ${getBaseUrl()}`)\n      }\n    })\n\n  config\n    .command('status')\n    .description('Check server connection status')\n    .action(async () => {\n      const logger = getLogger()\n      const client = getClient()\n\n      try {\n        type HealthClient = { health: { $get: () => Promise<Response> } }\n        const res = await (client as unknown as HealthClient).health.$get()\n        const data = await res.json()\n        logger.success('Server is reachable')\n        logger.info(JSON.stringify(data, null, 2))\n      } catch (error) {\n        logger.error(`Server not reachable: ${getBaseUrl()}`)\n        logger.error(String(error))\n      }\n    })\n\n  config\n    .command('reset')\n    .description('Reset configuration to defaults')\n    .action(() => {\n      const logger = getLogger()\n      const defaultConfig: Config = { baseUrl: 'http://localhost:3010' }\n      saveConfig(defaultConfig)\n      setBaseUrl(defaultConfig.baseUrl)\n      logger.success('Configuration reset to defaults')\n    })\n\n  config\n    .command('path')\n    .description('Show config file path')\n    .action(() => {\n      const logger = getLogger()\n      logger.info(`Config file: ${CONFIG_FILE}`)\n    })\n}\n\nexport { loadConfig, saveConfig, CONFIG_FILE }\n","import type { Command } from 'commander'\nimport { registerTodoCommands } from './todo'\nimport { registerNotificationCommands } from './notification'\nimport { registerConfigCommands } from './config'\n\nexport function registerModules(program: Command) {\n  registerTodoCommands(program)\n  registerNotificationCommands(program)\n  registerConfigCommands(program)\n}\n\nexport { registerTodoCommands, registerNotificationCommands, registerConfigCommands }\n","import { program } from 'commander'\nimport { registerModules } from './modules'\nimport { setBaseUrl } from './utils/api'\nimport { createLogger } from './utils/logger'\n\nprogram\n  .name('biomimic')\n  .description('Biomimic CLI - RPC service & code generation tools')\n  .version('0.1.0')\n  .option('-v, --verbose', 'Enable verbose output')\n  .option('-u, --url <url>', 'Server URL', 'http://localhost:3010')\n  .hook('preAction', thisCommand => {\n    const options = thisCommand.opts()\n    createLogger({ verbose: options.verbose })\n    if (options.url) {\n      setBaseUrl(options.url)\n    }\n  })\n\nregisterModules(program)\n\nprogram.parse()\n"]}