cortex-tms 2.4.1 → 2.5.0

package/README.md

@@ -1,6 +1,6 @@
 # Cortex TMS 🧠
 
-**The Universal AI-Optimized Project Boilerplate (v2.4.1)**
+**The Universal AI-Optimized Project Boilerplate (v2.5.0)**
 
 Cortex TMS is an **interactive operating system for AI-assisted development**. It's not just documentation—it's an **activation layer** that turns your repository into a machine-legible project constitution with intelligent tooling for version management and AI collaboration.
 
@@ -47,7 +47,25 @@ Traditional repos drown AI agents in thousands of lines of historical tasks and
 
 ## 🛠️ CLI Commands
 
-Cortex TMS provides 5 production-ready commands:
+Cortex TMS provides 6 production-ready commands:
+
+### `cortex-tms tutorial`
+Interactive walkthrough teaching the "Cortex Way" - perfect for first-time users.
+
+```bash
+cortex-tms tutorial  # Start the guided tour
+```
+
+**What You'll Learn**:
+- Project Dashboard: Using `status` to see your cockpit
+- AI Activation: Using `prompt` to activate project-aware AI agents
+- Zero-Drift Governance: Automated version sync with `docs:sync`
+- Health Checks: Understanding `validate` and the Archive Protocol
+- Safe Migration: Fearless template upgrades with backup/rollback
+
+**Navigation**: Use arrow keys and Enter to progress, select Exit to quit anytime
+
+---
 
 ### `cortex-tms init`
 Initialize TMS structure in your project with interactive scope selection.
@@ -75,11 +93,14 @@ cortex-tms status  # Visual dashboard with progress bars
 ```
 
 ### `cortex-tms migrate`
-Intelligent version management—detect outdated templates and custom modifications.
+Intelligent version management—detect outdated templates and automatically upgrade with safety backups.
 
 ```bash
-cortex-tms migrate           # Analyze version status
-cortex-tms migrate --dry-run # Preview migration plan
+cortex-tms migrate                    # Analyze version status
+cortex-tms migrate --apply            # Auto-upgrade OUTDATED files (creates backup)
+cortex-tms migrate --apply --force    # Upgrade ALL files including customized
+cortex-tms migrate --rollback         # Restore from backup (interactive selection)
+cortex-tms migrate --dry-run          # Preview migration plan
 ```
 
 **Status Categories**:
@@ -88,6 +109,12 @@ cortex-tms migrate --dry-run # Preview migration plan
 - `CUSTOMIZED`: Manual review needed (has user changes)
 - `MISSING`: Optional file not installed
 
+**Safety Features**:
+- Automatic backups in `.cortex/backups/` before any changes
+- Timestamped snapshots with manifest files
+- One-click rollback with interactive backup selection
+- Confirmation prompts prevent accidental overwrites
+
 ### `cortex-tms prompt`
 Access project-aware AI prompts from the Essential 7 library.
 
@@ -318,9 +345,9 @@ MIT
 
 ## Status
 
-**Version**: 2.4.1 (Stable / Production Ready)
+**Version**: 2.5.0 (Stable / Production Ready)
 **Last Updated**: 2026-01-14
 **Current Sprint**: v2.5 Planning - "Guidance & Growth"
 **Completed Sprints**: v2.1, v2.2, v2.3, v2.4 (see `docs/archive/`)
 
-<!-- @cortex-tms-version 2.4.1 -->
+<!-- @cortex-tms-version 2.5.0 -->

package/dist/cli.js

@@ -21,11 +21,13 @@ import { validateCommand } from './commands/validate.js';
 import { statusCommand } from './commands/status.js';
 import { migrateCommand } from './commands/migrate.js';
 import { promptCommand } from './commands/prompt.js';
+import { tutorialCommand } from './commands/tutorial.js';
 program.addCommand(initCommand);
 program.addCommand(validateCommand);
 program.addCommand(statusCommand);
 program.addCommand(migrateCommand);
 program.addCommand(promptCommand);
+program.addCommand(tutorialCommand);
 program.on('command:*', () => {
     console.error(chalk.red('\n❌ Invalid command:'), chalk.bold(program.args.join(' ')));
     console.log(chalk.gray('\nRun'), chalk.cyan('cortex-tms --help'), chalk.gray('to see available commands.'));

package/dist/cli.js.map

@@ -1 +1 @@
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package/dist/commands/migrate.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"migrate.d.ts","sourceRoot":"","sources":["../../src/commands/migrate.ts"],"names":[],"mappings":"AAMA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AAYpC,MAAM,MAAM,eAAe,GAAG,QAAQ,GAAG,UAAU,GAAG,YAAY,GAAG,SAAS,CAAC;AAK/E,MAAM,WAAW,aAAa;IAC5B,IAAI,EAAE,MAAM,CAAC;IACb,MAAM,EAAE,eAAe,CAAC;IACxB,cAAc,EAAE,MAAM,GAAG,IAAI,CAAC;IAC9B,aAAa,EAAE,MAAM,CAAC;IACtB,MAAM,CAAC,EAAE,MAAM,CAAC;CACjB;AAKD,wBAAgB,oBAAoB,IAAI,OAAO,CAa9C;AAKD,eAAO,MAAM,cAAc,SAAyB,CAAC"}
+{"version":3,"file":"migrate.d.ts","sourceRoot":"","sources":["../../src/commands/migrate.ts"],"names":[],"mappings":"AAMA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AAcpC,MAAM,MAAM,eAAe,GAAG,QAAQ,GAAG,UAAU,GAAG,YAAY,GAAG,SAAS,CAAC;AAK/E,MAAM,WAAW,aAAa;IAC5B,IAAI,EAAE,MAAM,CAAC;IACb,MAAM,EAAE,eAAe,CAAC;IACxB,cAAc,EAAE,MAAM,GAAG,IAAI,CAAC;IAC9B,aAAa,EAAE,MAAM,CAAC;IACtB,MAAM,CAAC,EAAE,MAAM,CAAC;CACjB;AAKD,wBAAgB,oBAAoB,IAAI,OAAO,CAe9C;AAKD,eAAO,MAAM,cAAc,SAAyB,CAAC"}

package/dist/commands/migrate.js

@@ -1,16 +1,20 @@
 import { Command } from 'commander';
 import chalk from 'chalk';
 import ora from 'ora';
+import inquirer from 'inquirer';
 import { join } from 'path';
 import { existsSync } from 'fs';
 import { loadConfig, getScopePreset } from '../utils/config.js';
 import { getPackageVersion, extractVersion, getTemplatesDir } from '../utils/templates.js';
+import { createBackup, listBackups, restoreBackup, formatBackupSize, getBackupSize } from '../utils/backup.js';
 import fs from 'fs-extra';
 export function createMigrateCommand() {
     const migrateCommand = new Command('migrate');
     migrateCommand
         .description('Upgrade TMS files to the current template version')
-        .option('-f, --force', 'Force upgrade even for customized files')
+        .option('-a, --apply', 'Apply automatic upgrades (creates backup first)')
+        .option('-r, --rollback', 'Restore files from a previous backup')
+        .option('-f, --force', 'Force upgrade even for customized files (requires --apply)')
         .option('-v, --verbose', 'Show detailed output')
         .option('-d, --dry-run', 'Preview changes without applying them')
         .action(async (options) => {
@@ -21,7 +25,11 @@ export function createMigrateCommand() {
 export const migrateCommand = createMigrateCommand();
 async function runMigrate(options) {
     const cwd = process.cwd();
-    const { force: _force = false, verbose: _verbose = false, dryRun = false } = options;
+    const { apply = false, rollback = false, force = false, verbose: _verbose = false, dryRun = false } = options;
+    if (rollback) {
+        await runRollback(cwd);
+        return;
+    }
     console.log(chalk.bold.cyan('\n🔄 Cortex TMS Migration\n'));
     if (dryRun) {
         console.log(chalk.yellow('🔍 DRY RUN MODE: No files will be modified.\n'));
@@ -72,12 +80,150 @@ async function runMigrate(options) {
         console.log(chalk.gray(`  ℹ ${missing.length} file(s) not installed (optional)`));
     }
     if (dryRun) {
-        printNextSteps(outdated.length, customized.length);
+        printNextSteps(outdated.length, customized.length, apply);
         return;
     }
-    printNextSteps(outdated.length, customized.length);
+    if (apply) {
+        await applyMigration(cwd, migrations, targetVersion, force);
+    }
+    else {
+        printNextSteps(outdated.length, customized.length, apply);
+    }
 }
-function printNextSteps(outdatedCount, customizedCount) {
+async function applyMigration(projectRoot, migrations, targetVersion, force) {
+    const outdated = migrations.filter((m) => m.status === 'OUTDATED');
+    const customized = migrations.filter((m) => m.status === 'CUSTOMIZED');
+    const filesToUpgrade = force ? [...outdated, ...customized] : outdated;
+    if (filesToUpgrade.length === 0) {
+        console.log(chalk.yellow('\n⚠️  No files to upgrade.\n'));
+        return;
+    }
+    console.log(chalk.bold('\n🔄 Files to be upgraded:\n'));
+    filesToUpgrade.forEach((file) => {
+        const icon = file.status === 'CUSTOMIZED' ? '⚠️ ' : '✓';
+        console.log(chalk.blue(`  ${icon} ${file.path}`));
+    });
+    if (!force && customized.length > 0) {
+        console.log(chalk.yellow(`\n⚠️  ${customized.length} CUSTOMIZED file(s) skipped. Use --force to upgrade them.\n`));
+    }
+    console.log(chalk.bold('\n💾 Creating backup...\n'));
+    const spinner = ora('Backing up files...').start();
+    const filePaths = filesToUpgrade.map((m) => join(projectRoot, m.path));
+    const backupResult = await createBackup(projectRoot, filePaths, `migrate to v${targetVersion}`, targetVersion);
+    if (!backupResult.success) {
+        spinner.fail('Backup failed');
+        console.log(chalk.red('\n❌ Error:'), backupResult.error);
+        console.log(chalk.gray('Migration aborted to prevent data loss.\n'));
+        process.exit(1);
+    }
+    spinner.succeed(`Backup created: ${chalk.cyan(backupResult.backupPath)}`);
+    console.log(chalk.gray(`   ${backupResult.filesBackedUp} file(s) backed up safely\n`));
+    console.log(chalk.bold('🚀 Applying upgrades...\n'));
+    const upgradeSpinner = ora('Updating files...').start();
+    let upgradedCount = 0;
+    const templatesDir = getTemplatesDir();
+    for (const migration of filesToUpgrade) {
+        const filePath = join(projectRoot, migration.path);
+        const templatePath = join(templatesDir, migration.path);
+        if (!existsSync(templatePath)) {
+            continue;
+        }
+        try {
+            await fs.copyFile(templatePath, filePath);
+            upgradedCount++;
+        }
+        catch (error) {
+            upgradeSpinner.warn(`Failed to upgrade ${migration.path}`);
+            console.log(chalk.yellow(`   ${error instanceof Error ? error.message : 'Unknown error'}`));
+        }
+    }
+    upgradeSpinner.succeed(`Upgraded ${upgradedCount} file(s) to v${targetVersion}`);
+    console.log(chalk.green.bold('\n✨ Migration complete!\n'));
+    console.log(chalk.gray('💡 Tip: Review changes with:'));
+    console.log(chalk.cyan('   git diff\n'));
+    console.log(chalk.gray('💡 To rollback, run:'));
+    console.log(chalk.cyan('   cortex-tms migrate --rollback\n'));
+}
+async function runRollback(projectRoot) {
+    console.log(chalk.bold.cyan('\n⏪ Cortex TMS Rollback\n'));
+    const spinner = ora('Searching for backups...').start();
+    const backups = await listBackups(projectRoot);
+    if (backups.length === 0) {
+        spinner.fail('No backups found');
+        console.log(chalk.yellow('\n⚠️  No backup snapshots available.'));
+        console.log(chalk.gray('Backups are created automatically when using:'));
+        console.log(chalk.cyan('   cortex-tms migrate --apply\n'));
+        return;
+    }
+    spinner.succeed(`Found ${backups.length} backup(s)`);
+    const choices = await Promise.all(backups.slice(0, 5).map(async (backup) => {
+        const backupPath = join(projectRoot, '.cortex', 'backups', backup.timestamp);
+        const size = await getBackupSize(backupPath);
+        const formattedSize = formatBackupSize(size);
+        const fileCount = backup.files.length;
+        return {
+            name: `${chalk.cyan(backup.timestamp)} - ${chalk.gray(`v${backup.version}`)} - ${chalk.blue(`${fileCount} file(s)`)} - ${chalk.gray(formattedSize)}`,
+            value: backup.timestamp,
+            short: backup.timestamp,
+        };
+    }));
+    choices.push({
+        name: chalk.gray('Cancel'),
+        value: 'cancel',
+        short: 'Cancel',
+    });
+    const { selectedBackup } = await inquirer.prompt([
+        {
+            type: 'list',
+            name: 'selectedBackup',
+            message: 'Select a backup to restore:',
+            choices,
+            pageSize: 10,
+        },
+    ]);
+    if (selectedBackup === 'cancel') {
+        console.log(chalk.gray('\n✓ Rollback cancelled.\n'));
+        return;
+    }
+    const selectedManifest = backups.find((b) => b.timestamp === selectedBackup);
+    if (!selectedManifest) {
+        console.log(chalk.red('\n❌ Error:'), 'Backup not found.\n');
+        return;
+    }
+    console.log(chalk.bold('\n📋 Files to be restored:\n'));
+    selectedManifest.files.forEach((file) => {
+        console.log(chalk.blue(`  ✓ ${file.relativePath}`));
+    });
+    const { confirmed } = await inquirer.prompt([
+        {
+            type: 'confirm',
+            name: 'confirmed',
+            message: chalk.yellow('This will overwrite current files. Continue?'),
+            default: false,
+        },
+    ]);
+    if (!confirmed) {
+        console.log(chalk.gray('\n✓ Rollback cancelled.\n'));
+        return;
+    }
+    console.log(chalk.bold('\n⏪ Restoring backup...\n'));
+    const restoreSpinner = ora('Restoring files...').start();
+    try {
+        const backupPath = join(projectRoot, '.cortex', 'backups', selectedBackup);
+        const restoredCount = await restoreBackup(backupPath);
+        restoreSpinner.succeed(`Restored ${restoredCount} file(s) from backup`);
+        console.log(chalk.green.bold('\n✨ Rollback complete!\n'));
+        console.log(chalk.gray('💡 Tip: Review restored files with:'));
+        console.log(chalk.cyan('   git diff\n'));
+    }
+    catch (error) {
+        restoreSpinner.fail('Rollback failed');
+        console.log(chalk.red('\n❌ Error:'), error instanceof Error ? error.message : 'Unknown error');
+        console.log(chalk.gray('Files may be partially restored.\n'));
+        process.exit(1);
+    }
+}
+function printNextSteps(outdatedCount, customizedCount, applyAvailable) {
     console.log(chalk.bold('\n📋 Next Steps:\n'));
     if (outdatedCount > 0) {
         console.log(chalk.blue('  1. Review OUTDATED files marked above'));
@@ -89,8 +235,20 @@ function printNextSteps(outdatedCount, customizedCount) {
     }
     console.log(chalk.gray(`  ${outdatedCount > 0 || customizedCount > 0 ? (outdatedCount > 0 && customizedCount > 0 ? '3' : '2') : '1'}. Check the latest templates at:`));
     console.log(chalk.cyan('     https://github.com/cortex-tms/cortex-tms/tree/main/templates'));
-    console.log(chalk.bold.cyan('\n🚀 Coming in v2.5:'), chalk.gray('Automatic upgrades with backup/rollback'));
-    console.log(chalk.gray('   For now, please manually review and update files as needed.\n'));
+    if (applyAvailable && (outdatedCount > 0 || customizedCount > 0)) {
+        console.log(chalk.bold.cyan('\n🚀 Automatic Upgrade Available:\n'));
+        if (outdatedCount > 0) {
+            console.log(chalk.blue('   cortex-tms migrate --apply'));
+            console.log(chalk.gray('   → Safely upgrade OUTDATED files (creates backup)\n'));
+        }
+        if (customizedCount > 0) {
+            console.log(chalk.yellow('   cortex-tms migrate --apply --force'));
+            console.log(chalk.gray('   → Upgrade ALL files including customized (use with caution)\n'));
+        }
+    }
+    else {
+        console.log(chalk.gray('   Or manually review and update files as needed.\n'));
+    }
 }
 async function analyzeFile(filePath, targetVersion) {
     const fileName = filePath.split('/').pop() || filePath;

package/dist/commands/migrate.js.map

@@ -1 +1 @@
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package/dist/commands/tutorial.d.ts

@@ -0,0 +1,4 @@
+import { Command } from 'commander';
+export declare function createTutorialCommand(): Command;
+export declare const tutorialCommand: Command;
+//# sourceMappingURL=tutorial.d.ts.map

package/dist/commands/tutorial.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"tutorial.d.ts","sourceRoot":"","sources":["../../src/commands/tutorial.ts"],"names":[],"mappings":"AAMA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AAiBpC,wBAAgB,qBAAqB,IAAI,OAAO,CAU/C;AAKD,eAAO,MAAM,eAAe,SAA0B,CAAC"}

package/dist/commands/tutorial.js

@@ -0,0 +1,203 @@
+import { Command } from 'commander';
+import chalk from 'chalk';
+import inquirer from 'inquirer';
+export function createTutorialCommand() {
+    const tutorialCommand = new Command('tutorial');
+    tutorialCommand
+        .description('Interactive walkthrough of Cortex TMS features')
+        .action(async () => {
+        await runTutorial();
+    });
+    return tutorialCommand;
+}
+export const tutorialCommand = createTutorialCommand();
+async function runTutorial() {
+    console.log(chalk.bold.cyan('\n🎓 Welcome to Cortex TMS Tutorial\n'));
+    console.log(chalk.gray('This interactive guide will teach you the "Cortex Way"'));
+    console.log(chalk.gray('Press Enter to continue through lessons, or select Exit to quit.\n'));
+    const lessons = [
+        {
+            title: '📊 Lesson 1: The Project Dashboard',
+            content: [
+                'Every Cortex TMS project has a visual dashboard showing:',
+                '  • Current scope (Nano/Standard/Enterprise)',
+                '  • Active tasks from NEXT-TASKS.md',
+                '  • Validation health status',
+                '  • Quick statistics at a glance',
+                '',
+                'Think of this as your "Project Cockpit" - everything you need to know in one command.',
+            ],
+            command: 'cortex-tms status',
+            tip: 'Run this command whenever you return to a project to get oriented.',
+        },
+        {
+            title: '🤖 Lesson 2: AI Agent Activation',
+            content: [
+                'Cortex TMS includes the "Essential 7" prompt library:',
+                '  • init-session - Start with context',
+                '  • feature - Implement with architectural anchors',
+                '  • debug - Troubleshoot systematically',
+                '  • review - Code review against patterns',
+                '  • refactor - Structural improvements',
+                '  • decision - Architecture decision records',
+                '  • finish - Execute maintenance protocol',
+                '',
+                'Each prompt is project-aware, referencing YOUR docs.',
+                'Prompts auto-copy to clipboard for instant paste!',
+            ],
+            command: 'cortex-tms prompt init-session',
+            tip: 'Customize prompts by editing PROMPTS.md in your project root.',
+        },
+        {
+            title: '🔄 Lesson 3: Zero-Drift Governance',
+            content: [
+                'Version drift is the #1 cause of documentation errors.',
+                'Cortex TMS eliminates this with automated version sync.',
+                '',
+                'How it works:',
+                '  1. Update package.json version (the Single Source of Truth)',
+                '  2. Run the sync script',
+                '  3. All docs automatically updated',
+                '',
+                'CI validates sync on every PR - drift cannot merge!',
+            ],
+            command: 'pnpm run docs:sync',
+            tip: 'If CI blocks your PR, run docs:sync locally and commit the changes.',
+        },
+        {
+            title: '✅ Lesson 4: Project Health & The Archive Protocol',
+            content: [
+                'The validate command checks project health:',
+                '  • Mandatory files exist',
+                '  • No placeholder text (e.g., [YOUR_PROJECT])',
+                '  • Configuration is valid',
+                '  • Archive status is healthy',
+                '',
+                'The Archive Protocol (you just experienced this!):',
+                '  • CI blocks PRs if >10 completed tasks in NEXT-TASKS.md',
+                '  • This forces regular archival to docs/archive/',
+                '  • Keeps NEXT-TASKS.md focused on current work',
+                '  • Prevents technical debt accumulation',
+                '',
+                'This is governance that enforces itself!',
+            ],
+            command: 'cortex-tms validate --strict',
+            tip: 'Run validate before commits to catch issues early.',
+        },
+        {
+            title: '🚀 Lesson 5: Safe Template Evolution',
+            content: [
+                'Templates evolve, but your customizations matter.',
+                'The Safe-Fail Migration Engine has 3 components:',
+                '',
+                '1. Backup Engine (automatic snapshots)',
+                '   • Timestamped backups in .cortex/backups/',
+                '   • Created BEFORE any changes',
+                '   • Manifest tracks what/why',
+                '',
+                '2. Apply Logic (smart upgrades)',
+                '   • Auto-upgrades OUTDATED files',
+                '   • Skips CUSTOMIZED files (unless --force)',
+                '   • Clear status reporting',
+                '',
+                '3. Rollback Command (one-click recovery)',
+                '   • Interactive backup selection',
+                '   • Preview before restore',
+                '   • Confirmation required',
+                '',
+                'Upgrade fearlessly - recovery is one command away!',
+            ],
+            command: 'cortex-tms migrate',
+            tip: 'Always run migrate (no flags) first to see what needs updating.',
+        },
+    ];
+    let currentLesson = 0;
+    while (currentLesson < lessons.length) {
+        const lesson = lessons[currentLesson];
+        if (!lesson) {
+            break;
+        }
+        console.clear();
+        console.log(chalk.bold.cyan(`\n${lesson.title}\n`));
+        console.log(chalk.gray(`Lesson ${currentLesson + 1} of ${lessons.length}\n`));
+        lesson.content.forEach((line) => {
+            if (line === '') {
+                console.log();
+            }
+            else if (line.startsWith('  •')) {
+                console.log(chalk.blue(line));
+            }
+            else if (line.startsWith('  ')) {
+                console.log(chalk.gray(line));
+            }
+            else {
+                console.log(chalk.white(line));
+            }
+        });
+        if (lesson.command) {
+            console.log(chalk.bold.yellow('\n💻 Try this command:\n'));
+            console.log(chalk.cyan(`   ${lesson.command}\n`));
+        }
+        if (lesson.tip) {
+            console.log(chalk.gray(`💡 Pro Tip: ${lesson.tip}\n`));
+        }
+        const isLast = currentLesson === lessons.length - 1;
+        const choices = isLast
+            ? [
+                { name: chalk.green('✓ Finish Tutorial'), value: 'next' },
+                { name: chalk.gray('← Previous Lesson'), value: 'prev' },
+                { name: chalk.red('Exit Tutorial'), value: 'exit' },
+            ]
+            : [
+                { name: chalk.green('→ Next Lesson'), value: 'next' },
+                ...(currentLesson > 0
+                    ? [{ name: chalk.gray('← Previous Lesson'), value: 'prev' }]
+                    : []),
+                { name: chalk.red('Exit Tutorial'), value: 'exit' },
+            ];
+        const { action } = await inquirer.prompt([
+            {
+                type: 'list',
+                name: 'action',
+                message: 'What would you like to do?',
+                choices,
+            },
+        ]);
+        if (action === 'exit') {
+            console.log(chalk.gray('\n✓ Tutorial exited. Run "cortex-tms tutorial" anytime to continue.\n'));
+            return;
+        }
+        else if (action === 'prev') {
+            currentLesson = Math.max(0, currentLesson - 1);
+        }
+        else if (action === 'next') {
+            if (isLast) {
+                break;
+            }
+            else {
+                currentLesson++;
+            }
+        }
+    }
+    console.clear();
+    console.log(chalk.bold.green('\n🎉 Tutorial Complete!\n'));
+    console.log(chalk.white('You now know the Cortex Way:'));
+    console.log(chalk.blue('  • Dashboard: cortex-tms status'));
+    console.log(chalk.blue('  • AI Activation: cortex-tms prompt'));
+    console.log(chalk.blue('  • Version Sync: pnpm run docs:sync'));
+    console.log(chalk.blue('  • Health Check: cortex-tms validate'));
+    console.log(chalk.blue('  • Migration: cortex-tms migrate'));
+    console.log();
+    console.log(chalk.gray('💡 Next Steps:'));
+    console.log(chalk.cyan('   1. Run "cortex-tms status" to see your project dashboard'));
+    console.log(chalk.cyan('   2. Run "cortex-tms prompt init-session" to start coding'));
+    console.log(chalk.cyan('   3. Read NEXT-TASKS.md to see what to work on next'));
+    console.log();
+    console.log(chalk.gray('📚 For more details, see:'));
+    console.log(chalk.gray('   • CLAUDE.md (agent workflow)'));
+    console.log(chalk.gray('   • docs/core/ARCHITECTURE.md (technical design)'));
+    console.log(chalk.gray('   • docs/core/PATTERNS.md (coding standards)'));
+    console.log();
+    console.log(chalk.bold.cyan('Happy coding! 🚀\n'));
+}
+//# sourceMappingURL=tutorial.js.map

package/dist/commands/tutorial.js.map

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package/dist/utils/backup.d.ts

@@ -0,0 +1,26 @@
+export interface BackupFileInfo {
+    relativePath: string;
+    originalPath: string;
+    size: number;
+    reason: string;
+}
+export interface BackupManifest {
+    timestamp: string;
+    version: string;
+    reason: string;
+    files: BackupFileInfo[];
+    projectRoot: string;
+}
+export interface BackupResult {
+    success: boolean;
+    backupPath: string;
+    filesBackedUp: number;
+    error?: string;
+}
+export declare function createBackup(projectRoot: string, filesToBackup: string[], reason: string, version: string): Promise<BackupResult>;
+export declare function restoreBackup(backupPath: string): Promise<number>;
+export declare function listBackups(projectRoot: string): Promise<BackupManifest[]>;
+export declare function pruneBackups(projectRoot: string, keepCount?: number): Promise<number>;
+export declare function getBackupSize(backupPath: string): Promise<number>;
+export declare function formatBackupSize(bytes: number): string;
+//# sourceMappingURL=backup.d.ts.map

package/dist/utils/backup.d.ts.map

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package/dist/utils/backup.js

@@ -0,0 +1,143 @@
+import { join, dirname, relative } from 'path';
+import { existsSync, mkdirSync } from 'fs';
+import fs from 'fs-extra';
+export async function createBackup(projectRoot, filesToBackup, reason, version) {
+    try {
+        const timestamp = generateTimestamp();
+        const backupDir = join(projectRoot, '.cortex', 'backups', timestamp);
+        if (!existsSync(backupDir)) {
+            mkdirSync(backupDir, { recursive: true });
+        }
+        const backedUpFiles = [];
+        for (const filePath of filesToBackup) {
+            if (!existsSync(filePath)) {
+                continue;
+            }
+            const relativePath = relative(projectRoot, filePath);
+            const destPath = join(backupDir, relativePath);
+            const destDir = dirname(destPath);
+            if (!existsSync(destDir)) {
+                mkdirSync(destDir, { recursive: true });
+            }
+            await fs.copyFile(filePath, destPath);
+            const stats = await fs.stat(filePath);
+            backedUpFiles.push({
+                relativePath,
+                originalPath: filePath,
+                size: stats.size,
+                reason: `Backup before ${reason}`,
+            });
+        }
+        const manifest = {
+            timestamp,
+            version,
+            reason,
+            files: backedUpFiles,
+            projectRoot,
+        };
+        const manifestPath = join(backupDir, 'manifest.json');
+        await fs.writeJson(manifestPath, manifest, { spaces: 2 });
+        return {
+            success: true,
+            backupPath: backupDir,
+            filesBackedUp: backedUpFiles.length,
+        };
+    }
+    catch (error) {
+        return {
+            success: false,
+            backupPath: '',
+            filesBackedUp: 0,
+            error: error instanceof Error ? error.message : 'Unknown error',
+        };
+    }
+}
+export async function restoreBackup(backupPath) {
+    const manifestPath = join(backupPath, 'manifest.json');
+    if (!existsSync(manifestPath)) {
+        throw new Error('Backup manifest not found');
+    }
+    const manifest = await fs.readJson(manifestPath);
+    let restoredCount = 0;
+    for (const fileInfo of manifest.files) {
+        const sourcePath = join(backupPath, fileInfo.relativePath);
+        const destPath = fileInfo.originalPath;
+        if (!existsSync(sourcePath)) {
+            continue;
+        }
+        const destDir = dirname(destPath);
+        if (!existsSync(destDir)) {
+            mkdirSync(destDir, { recursive: true });
+        }
+        await fs.copyFile(sourcePath, destPath);
+        restoredCount++;
+    }
+    return restoredCount;
+}
+export async function listBackups(projectRoot) {
+    const backupsDir = join(projectRoot, '.cortex', 'backups');
+    if (!existsSync(backupsDir)) {
+        return [];
+    }
+    const backupDirs = await fs.readdir(backupsDir);
+    const manifests = [];
+    for (const dir of backupDirs) {
+        const manifestPath = join(backupsDir, dir, 'manifest.json');
+        if (existsSync(manifestPath)) {
+            try {
+                const manifest = await fs.readJson(manifestPath);
+                manifests.push(manifest);
+            }
+            catch (error) {
+                continue;
+            }
+        }
+    }
+    return manifests.sort((a, b) => b.timestamp.localeCompare(a.timestamp));
+}
+export async function pruneBackups(projectRoot, keepCount = 10) {
+    const backups = await listBackups(projectRoot);
+    if (backups.length <= keepCount) {
+        return 0;
+    }
+    const backupsDir = join(projectRoot, '.cortex', 'backups');
+    const toDelete = backups.slice(keepCount);
+    let deletedCount = 0;
+    for (const backup of toDelete) {
+        const backupDir = join(backupsDir, backup.timestamp);
+        if (existsSync(backupDir)) {
+            await fs.remove(backupDir);
+            deletedCount++;
+        }
+    }
+    return deletedCount;
+}
+function generateTimestamp() {
+    const now = new Date();
+    const year = now.getFullYear();
+    const month = String(now.getMonth() + 1).padStart(2, '0');
+    const day = String(now.getDate()).padStart(2, '0');
+    const hours = String(now.getHours()).padStart(2, '0');
+    const minutes = String(now.getMinutes()).padStart(2, '0');
+    const seconds = String(now.getSeconds()).padStart(2, '0');
+    return `${year}-${month}-${day}_${hours}${minutes}${seconds}`;
+}
+export async function getBackupSize(backupPath) {
+    const manifestPath = join(backupPath, 'manifest.json');
+    if (!existsSync(manifestPath)) {
+        return 0;
+    }
+    const manifest = await fs.readJson(manifestPath);
+    return manifest.files.reduce((total, file) => total + file.size, 0);
+}
+export function formatBackupSize(bytes) {
+    const units = ['B', 'KB', 'MB', 'GB'];
+    let size = bytes;
+    let unitIndex = 0;
+    while (size >= 1024 && unitIndex < units.length - 1) {
+        size /= 1024;
+        unitIndex++;
+    }
+    return `${size.toFixed(1)} ${units[unitIndex]}`;
+}
+//# sourceMappingURL=backup.js.map

package/dist/utils/backup.js.map

@@ -0,0 +1 @@
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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "cortex-tms",
-  "version": "2.4.1",
+  "version": "2.5.0",
   "description": "The Universal AI-Optimized Project Boilerplate - CLI tool for bootstrapping TMS-structured projects",
   "type": "module",
   "bin": {
@@ -16,6 +16,20 @@
   "engines": {
     "node": ">=18.0.0"
   },
+  "scripts": {
+    "build": "pnpm run cli:build",
+    "prepublishOnly": "pnpm run build",
+    "cli:dev": "tsx src/cli.ts",
+    "cli:build": "tsc -p tsconfig.cli.json",
+    "cli:test": "node bin/cortex-tms.js --help",
+    "docs:sync": "node scripts/sync-project.js",
+    "docs:check": "node scripts/sync-project.js --check",
+    "test": "vitest run",
+    "test:watch": "vitest",
+    "test:coverage": "vitest run --coverage",
+    "lint": "eslint src/**/*.ts",
+    "format": "prettier --write \"src/**/*.ts\""
+  },
   "keywords": [
     "documentation",
     "boilerplate",
@@ -54,16 +68,5 @@
     "tsx": "^4.19.2",
     "typescript": "^5.7.3",
     "vitest": "^4.0.17"
-  },
-  "scripts": {
-    "build": "pnpm run cli:build",
-    "cli:dev": "tsx src/cli.ts",
-    "cli:build": "tsc -p tsconfig.cli.json",
-    "cli:test": "node bin/cortex-tms.js --help",
-    "test": "vitest run",
-    "test:watch": "vitest",
-    "test:coverage": "vitest run --coverage",
-    "lint": "eslint src/**/*.ts",
-    "format": "prettier --write \"src/**/*.ts\""
   }
-}
+}

package/templates/PROMPTS.md

@@ -42,7 +42,13 @@ We need to decide on `[TOPIC]`. Draft a new Architecture Decision Record in `doc
 
 ## finish
 
-Task complete. Execute the Maintenance Protocol: update `NEXT-TASKS.md`, sync truth to `docs/core/`, and suggest the next priority.
+Task complete. Execute the Maintenance Protocol:
+
+1. Run `pnpm run docs:sync` to ensure version integrity across documentation
+2. Update `NEXT-TASKS.md` with task status and next priorities
+3. Run `node bin/cortex-tms.js validate --strict` to verify project health
+4. Follow Git Protocol: commit with conventional format and co-authorship
+5. Suggest next priority from backlog
 
 ---
 
@@ -52,4 +58,4 @@ Task complete. Execute the Maintenance Protocol: update `NEXT-TASKS.md`, sync tr
 - Customize these prompts to match your team's vocabulary and workflow
 - Run `cortex-tms prompt --list` to see all available prompts
 
-<!-- @cortex-tms-version 2.3.0 -->
+<!-- @cortex-tms-version 2.4.1 -->