copper3d 2.2.3 → 3.0.0

package/dist/types/Utils/segmentation/tools/DragSliceTool.d.ts

@@ -0,0 +1,44 @@
+/**
+ * DragSliceTool - Drag-based slice navigation
+ *
+ * Extracted from DragOperator.ts:
+ * - updateIndex
+ * - drawDragSlice
+ * - drawMaskToLayerCtx
+ * - cleanCanvases
+ * - updateShowNumDiv / updateCurrentContrastSlice
+ */
+import { BaseTool } from "./BaseTool";
+import type { ToolContext } from "./BaseTool";
+import type { ILayerRenderTarget } from "../coreTools/coreType";
+export interface DragSliceCallbacks {
+    setSyncsliceNum: () => void;
+    setIsDrawFalse: (target: number) => void;
+    flipDisplayImageByAxis: () => void;
+    setEmptyCanvasSize: (axis?: "x" | "y" | "z") => void;
+    getOrCreateSliceBuffer: (axis: "x" | "y" | "z") => ImageData | null;
+    renderSliceToCanvas: (layer: string, axis: "x" | "y" | "z", sliceIndex: number, buffer: ImageData, targetCtx: CanvasRenderingContext2D, scaledWidth: number, scaledHeight: number) => void;
+}
+interface IDragEffectCanvases {
+    drawingCanvasLayerMaster: HTMLCanvasElement;
+    displayCanvas: HTMLCanvasElement;
+    layerTargets: Map<string, ILayerRenderTarget>;
+    [key: string]: HTMLCanvasElement | Map<string, ILayerRenderTarget>;
+}
+export declare class DragSliceTool extends BaseTool {
+    private callbacks;
+    private showDragNumberDiv;
+    private dragEffectCanvases;
+    constructor(ctx: ToolContext, callbacks: DragSliceCallbacks, showDragNumberDiv: HTMLDivElement, dragEffectCanvases: IDragEffectCanvases);
+    setShowDragNumberDiv(div: HTMLDivElement): void;
+    updateIndex(move: number): void;
+    private drawDragSlice;
+    /**
+     * Composite all visible layer canvases to the master display canvas.
+     */
+    private compositeAllLayers;
+    private cleanCanvases;
+    updateShowNumDiv(contrastNum: number): void;
+    updateCurrentContrastSlice(): any;
+}
+export {};

package/dist/types/Utils/segmentation/tools/EraserTool.d.ts

@@ -0,0 +1,16 @@
+/**
+ * EraserTool - Channel-aware circular eraser implementation
+ *
+ * Phase 3.5: Updated to only erase pixels matching the active channel color
+ * on the current layer canvas. Other channels/layers are untouched.
+ */
+import { BaseTool } from "./BaseTool";
+export declare class EraserTool extends BaseTool {
+    /**
+     * Create the circular eraser function.
+     *
+     * Channel-aware: only erases pixels whose RGB matches the active channel's color.
+     * Only operates on the current layer canvas + master canvas.
+     */
+    createClearArc(): (x: number, y: number, radius: number) => void;
+}

package/dist/types/Utils/segmentation/tools/ImageStoreHelper.d.ts

@@ -0,0 +1,65 @@
+/**
+ * ImageStoreHelper - Cross-axis image storage
+ *
+ * Extracted from DrawToolCore.ts:
+ * - storeAllImages / storeImageToAxis / storeImageToLayer / storeEachLayerImage
+ *
+ * Phase 2 Day 7: Updated to write/read MaskVolume alongside legacy IPaintImages.
+ * Volume is the primary storage; IPaintImages kept for backward compatibility.
+ */
+import { BaseTool } from "./BaseTool";
+import type { ToolContext } from "./BaseTool";
+import type { IPaintImage, IPaintImages } from "../coreTools/coreType";
+export interface ImageStoreCallbacks {
+    setEmptyCanvasSize: (axis?: "x" | "y" | "z") => void;
+    drawImageOnEmptyImage: (canvas: HTMLCanvasElement) => void;
+}
+export declare class ImageStoreHelper extends BaseTool {
+    private callbacks;
+    constructor(ctx: ToolContext, callbacks: ImageStoreCallbacks);
+    /**
+     * Get MaskVolume for a specific layer.
+     * Delegates to the volumes stored in protectedData.maskData.
+     *
+     * @param layer - "layer1", "layer2", or "layer3"
+     * @returns MaskVolume for the given layer, or layer1 as fallback
+     */
+    private getVolumeForLayer;
+    /**
+     * Get MaskVolume for the currently active layer.
+     */
+    private getCurrentVolume;
+    /**
+     * Get the canvas element for a specific layer.
+     */
+    private getCanvasForLayer;
+    /**
+     * Phase 3: Simplified to be a no-op.
+     * MaskVolume storage happens in storeAllImages via setSliceFromImageData.
+     * This method kept for backward compatibility with existing call sites.
+     */
+    storeImageToAxis(_index: number, _paintedImages: IPaintImages, _imageData: ImageData, _axis?: "x" | "y" | "z"): void;
+    /**
+     * Retrieve the drawn image for a given axis and slice.
+     *
+     * Phase 3: Reads exclusively from MaskVolume (no legacy fallback).
+     */
+    filterDrawedImage(axis: "x" | "y" | "z", sliceIndex: number, _paintedImages: IPaintImages): IPaintImage | undefined;
+    /**
+     * Store all layer images for the current slice (cross-axis sync).
+     *
+     * Phase 2: Also writes into the current layer's MaskVolume.
+     */
+    storeAllImages(index: number, layer: string): void;
+    /**
+     * Store a single layer's canvas data to its MaskVolume.
+     * Reads from the individual layer canvas (not master) and uses RGB→channel reverse lookup.
+     */
+    storeEachLayerImage(index: number, layer: string): void;
+    /**
+     * Phase 3: Simplified - extracts ImageData from canvas but no longer stores to paintImages.
+     * Kept for backward compatibility with existing call sites.
+     */
+    storeImageToLayer(_index: number, canvas: HTMLCanvasElement, _paintedImages: IPaintImages): ImageData;
+    private hasNonZeroPixels;
+}

package/dist/types/Utils/segmentation/tools/SphereTool.d.ts

@@ -0,0 +1,38 @@
+/**
+ * SphereTool - Sphere drawing and calculator sphere operations
+ *
+ * Extracted from DrawToolCore.ts:
+ * - drawSphere / drawSphereCore / clearSphereCanvas
+ * - drawSphereOnEachViews / drawCalculatorSphereOnEachViews
+ * - storeSphereImages / setSphereCanvasSize
+ * - drawCalculatorSphere / configMouseSphereWheel
+ * - getSpherePosition / clearSpherePrintStoreImages
+ */
+import { BaseTool } from "./BaseTool";
+import type { ToolContext } from "./BaseTool";
+import type { IPaintImages } from "../coreTools/coreType";
+/**
+ * Callbacks that DrawToolCore must provide for sphere operations.
+ */
+export interface SphereCallbacks {
+    setEmptyCanvasSize: (axis?: "x" | "y" | "z") => void;
+    drawImageOnEmptyImage: (canvas: HTMLCanvasElement) => void;
+    storeImageToAxis: (index: number, paintedImages: IPaintImages, imageData: ImageData, axis?: "x" | "y" | "z") => void;
+    createEmptyPaintImage: (dimensions: number[], paintImages: IPaintImages) => void;
+}
+export declare class SphereTool extends BaseTool {
+    private callbacks;
+    constructor(ctx: ToolContext, callbacks: SphereCallbacks);
+    setCallbacks(callbacks: SphereCallbacks): void;
+    setSphereCanvasSize(axis?: "x" | "y" | "z"): void;
+    drawSphereCore(ctx: CanvasRenderingContext2D, x: number, y: number, radius: number, color: string): void;
+    clearSphereCanvas(): [HTMLCanvasElement, CanvasRenderingContext2D];
+    drawSphere(mouseX: number, mouseY: number, radius: number): void;
+    configMouseSphereWheel(): (e: WheelEvent) => void;
+    private storeSphereImages;
+    drawSphereOnEachViews(decay: number, axis: "x" | "y" | "z"): void;
+    private getSpherePosition;
+    drawCalculatorSphereOnEachViews(axis: "x" | "y" | "z"): void;
+    drawCalculatorSphere(radius: number): void;
+    clearSpherePrintStoreImages(): void;
+}

package/dist/types/Utils/segmentation/tools/ZoomTool.d.ts

@@ -0,0 +1,20 @@
+/**
+ * ZoomTool - Mouse wheel zoom configuration
+ *
+ * Extracted from DrawToolCore.ts:
+ * - configMouseZoomWheel
+ */
+import { BaseTool } from "./BaseTool";
+import type { ToolContext } from "./BaseTool";
+export interface ZoomCallbacks {
+    resetPaintAreaUIPosition: (l?: number, t?: number) => void;
+    resizePaintArea: (moveDistance: number) => void;
+    setIsDrawFalse: (target: number) => void;
+}
+export declare class ZoomTool extends BaseTool {
+    private container;
+    private mainAreaContainer;
+    private callbacks;
+    constructor(ctx: ToolContext, container: HTMLElement, mainAreaContainer: HTMLDivElement, callbacks: ZoomCallbacks);
+    configMouseZoomWheel(): (e: WheelEvent) => void;
+}

package/dist/types/Utils/segmentation/tools/index.d.ts

@@ -0,0 +1,22 @@
+/**
+ * Legacy Tool Exports
+ *
+ * Tools extracted from DrawToolCore.ts and DragOperator.ts.
+ * These tools operate on the old INrrdStates/IGUIStates/IProtected interfaces.
+ *
+ * For the new SegmentationManager tool system, see manager/tools/.
+ */
+export { BaseTool } from "./BaseTool";
+export type { ToolContext } from "./BaseTool";
+export { EraserTool } from "./EraserTool";
+export { ZoomTool } from "./ZoomTool";
+export type { ZoomCallbacks } from "./ZoomTool";
+export { SphereTool } from "./SphereTool";
+export type { SphereCallbacks } from "./SphereTool";
+export { CrosshairTool } from "./CrosshairTool";
+export { ContrastTool } from "./ContrastTool";
+export type { ContrastCallbacks } from "./ContrastTool";
+export { ImageStoreHelper } from "./ImageStoreHelper";
+export type { ImageStoreCallbacks } from "./ImageStoreHelper";
+export { DragSliceTool } from "./DragSliceTool";
+export type { DragSliceCallbacks } from "./DragSliceTool";

package/dist/types/index.d.ts

@@ -18,7 +18,9 @@ import { MeshNodeTool } from "./Utils/MeshNodeTool";
 import { removeGuiFolderChilden } from "./Utils/segmentation/coreTools/gui";
 import { nrrdMeshesType, nrrdSliceType, SensorDecodedValue_kiwrious, SensorReadResult_kiwrious, HeartRateResult_kiwrious, loadingBarType, exportPaintImageType, IOptVTKLoader } from "./types/types";
 import { IPaintImage, ICommXYZ, IGUIStates, IGuiParameterSettings, INrrdStates } from "./Utils/segmentation/coreTools/coreType";
+import { CHANNEL_COLORS, CHANNEL_HEX_COLORS, rgbaToHex, rgbaToCss } from "./Utils/segmentation/core/index";
+import type { LayerId, ChannelValue } from "./Utils/segmentation/core/index";
 import "./css/style.css";
-export declare const REVISION = "v2.2.3";
-export { copperRenderer, copperRendererOnDemond, copperMSceneRenderer, setHDRFilePath, addLabelToScene, convert3DPostoScreenPos, convertScreenPosto3DPos, addBoxHelper, fullScreenListenner, configKiwriousHeart, copperScene, copperSceneOnDemond, copperMScene, CameraViewPoint, kiwrious, NrrdTools, loading, Copper3dTrackballControls, createTexture2D_NRRD, MeshNodeTool, throttle, removeGuiFolderChilden, };
-export type { positionType, screenPosType, optsType, nrrdMeshesType, nrrdSliceType, SensorDecodedValue_kiwrious, SensorReadResult_kiwrious, HeartRateResult_kiwrious, loadingBarType, IPaintImage, exportPaintImageType, IOptVTKLoader, ICommXYZ, IGUIStates, IGuiParameterSettings, INrrdStates };
+export declare const REVISION = "v3.0.0-beta";
+export { copperRenderer, copperRendererOnDemond, copperMSceneRenderer, setHDRFilePath, addLabelToScene, convert3DPostoScreenPos, convertScreenPosto3DPos, addBoxHelper, fullScreenListenner, configKiwriousHeart, copperScene, copperSceneOnDemond, copperMScene, CameraViewPoint, kiwrious, NrrdTools, loading, Copper3dTrackballControls, createTexture2D_NRRD, MeshNodeTool, throttle, removeGuiFolderChilden, CHANNEL_COLORS, CHANNEL_HEX_COLORS, rgbaToHex, rgbaToCss, };
+export type { positionType, screenPosType, optsType, nrrdMeshesType, nrrdSliceType, SensorDecodedValue_kiwrious, SensorReadResult_kiwrious, HeartRateResult_kiwrious, loadingBarType, IPaintImage, exportPaintImageType, IOptVTKLoader, ICommXYZ, IGUIStates, IGuiParameterSettings, INrrdStates, LayerId, ChannelValue, };

package/dist/types/types/types.d.ts

@@ -132,9 +132,9 @@ interface exportPaintImageType {
     data: number[];
 }
 interface storeExportPaintImageType {
-    label1: exportPaintImageType[];
-    label2: exportPaintImageType[];
-    label3: exportPaintImageType[];
+    layer1: exportPaintImageType[];
+    layer2: exportPaintImageType[];
+    layer3: exportPaintImageType[];
 }
 interface optionsGltfExporterType {
     trs?: boolean;

package/dist/types/types.d.ts

@@ -132,9 +132,9 @@ interface exportPaintImageType {
     data: number[];
 }
 interface storeExportPaintImageType {
-    label1: exportPaintImageType[];
-    label2: exportPaintImageType[];
-    label3: exportPaintImageType[];
+    layer1: exportPaintImageType[];
+    layer2: exportPaintImageType[];
+    layer3: exportPaintImageType[];
 }
 interface optionsGltfExporterType {
     trs?: boolean;

package/package.json

@@ -1,7 +1,7 @@
 {
   "name": "copper3d",
   "description": "A 3d visualisation package base on threejs provides multiple scenes and Nrrd image load funtion.",
-  "version": "2.2.3",
+  "version": "3.0.0",
   "main": "dist/bundle.umd.js",
   "moudle": "dist/bundle.esm.js",
   "types": "dist/types/index.d.ts",

package/dist/Utils/segmentation/coreTools/archive.d.ts

@@ -1 +0,0 @@
-export {};

package/dist/Utils/segmentation/coreTools/archive.js

@@ -1,23 +0,0 @@
-// Not use this function now!!!
-import { saveFileAsJson } from "../../download";
-import { restructData, convertReformatDataToBlob, } from "../../workers/reformatSaveDataWorker";
-function verifyCanvasIsEmpty(canvas, protectedData) {
-    protectedData.canvases.emptyCanvas.width = canvas.width;
-    protectedData.canvases.emptyCanvas.height = canvas.height;
-    const validation = canvas.toDataURL() === protectedData.canvases.emptyCanvas.toDataURL();
-    return validation;
-}
-function exportData(nrrd_states, protectedData) {
-    let exportDataFormat = { x: [], y: [], z: [] };
-    window.alert("Export masks, starting!!!");
-    const masks = restructData(protectedData.maskData.paintImages.z, nrrd_states.nrrd_z_pixel, nrrd_states.nrrd_x_pixel, nrrd_states.nrrd_y_pixel);
-    const blob = convertReformatDataToBlob(masks);
-    if (blob) {
-        saveFileAsJson(blob, "copper3D_export data_z.json");
-        window.alert("Export masks successfully!!!");
-    }
-    else {
-        window.alert("Export failed!");
-    }
-}
-//# sourceMappingURL=archive.js.map

package/dist/Utils/segmentation/coreTools/archive.js.map

@@ -1 +0,0 @@
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package/dist/types/Utils/segmentation/coreTools/archive.d.ts

@@ -1 +0,0 @@
-export {};