cograph 0.1.27 → 0.1.29

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Files changed (12) hide show
  1. package/dist/{chunk-PE2EOIGT.js → chunk-7OEMCJQV.js} +219 -2
  2. package/dist/chunk-7OEMCJQV.js.map +1 -0
  3. package/dist/cli.js +63 -8
  4. package/dist/cli.js.map +1 -1
  5. package/dist/index.d.ts +30 -0
  6. package/dist/index.js +29 -0
  7. package/dist/index.js.map +1 -1
  8. package/dist/{shell-A5UU33YS.js → shell-VOCMRAYT.js} +62 -4
  9. package/dist/shell-VOCMRAYT.js.map +1 -0
  10. package/package.json +1 -1
  11. package/dist/chunk-PE2EOIGT.js.map +0 -1
  12. package/dist/shell-A5UU33YS.js.map +0 -1
package/dist/cli.js.map CHANGED
@@ -1 +1 @@
1
- {"version":3,"sources":["../src/cli.ts"],"sourcesContent":["import { createInterface } from \"node:readline\";\nimport { readFileSync } from \"node:fs\";\nimport { dirname, join } from \"node:path\";\nimport { fileURLToPath } from \"node:url\";\nimport { Command } from \"commander\";\nimport { Client, CographError } from \"./client.js\";\nimport { readConfig, writeConfig, configPathForDisplay } from \"./config.js\";\n\n// Read version from package.json at runtime so we never drift again.\n// dist/cli.js sits next to package.json once published; in dev (`npm link`)\n// dist/cli.js sits inside packages/cograph/dist/, so the parent dir is the\n// package root either way.\nfunction pkgVersion(): string {\n try {\n const here = dirname(fileURLToPath(import.meta.url));\n const pkg = JSON.parse(readFileSync(join(here, \"..\", \"package.json\"), \"utf-8\"));\n return typeof pkg.version === \"string\" ? pkg.version : \"0.0.0\";\n } catch {\n return \"0.0.0\";\n }\n}\n\nfunction client(): Client {\n // Honor the global flags: --tenant overrides the saved default for this\n // command; --local points at a self-hosted backend. Both fall through to\n // env / ~/.cograph/config.json when not passed.\n const g = program.opts() as { tenant?: string; local?: boolean };\n return new Client({\n ...(g.tenant ? { tenant: g.tenant } : {}),\n ...(g.local ? { baseUrl: \"http://localhost:8000\" } : {}),\n });\n}\n\nfunction printJson(data: unknown): void {\n process.stdout.write(JSON.stringify(data, null, 2) + \"\\n\");\n}\n\nfunction fail(msg: string, code = 1): never {\n process.stderr.write(msg.endsWith(\"\\n\") ? msg : msg + \"\\n\");\n process.exit(code);\n}\n\nasync function withErrors<T>(fn: () => Promise<T>): Promise<T | void> {\n try {\n return await fn();\n } catch (err) {\n if (err instanceof CographError) {\n fail(`Error: ${err.message}`);\n }\n fail(`Error: ${err instanceof Error ? err.message : String(err)}`);\n }\n}\n\nasync function confirm(prompt: string): Promise<boolean> {\n const rl = createInterface({ input: process.stdin, output: process.stdout });\n return new Promise((resolve) => {\n rl.question(`${prompt} [y/N] `, (ans) => {\n rl.close();\n resolve(ans.trim().toLowerCase() === \"y\");\n });\n });\n}\n\n/** Like confirm() but defaults to yes (used for the primary \"apply\" action). */\nasync function confirmYes(prompt: string): Promise<boolean> {\n const rl = createInterface({ input: process.stdin, output: process.stdout });\n return new Promise((resolve) => {\n rl.question(`${prompt} [Y/n] `, (ans) => {\n rl.close();\n const a = ans.trim().toLowerCase();\n resolve(a === \"\" || a === \"y\" || a === \"yes\");\n });\n });\n}\n\n// ---------------------------------------------------------------------------\n// CSV schema review — terminal port of the Explorer's confirm/override gate.\n// The backend applies exactly what /ingest/csv/rows is given, so the client is\n// responsible for surfacing the inferred mapping and gating held-for-review\n// type extensions before any rows are written.\n// ---------------------------------------------------------------------------\n\nconst useColor = Boolean(process.stdout.isTTY) && !process.env.NO_COLOR;\nconst sgr = (code: string) => (s: string): string =>\n useColor ? `\\x1b[${code}m${s}\\x1b[0m` : s;\nconst bold = sgr(\"1\");\nconst dim = sgr(\"2\");\n\ntype Mapping = Record<string, any>;\n\ninterface EntityView {\n name: string;\n type_name: string;\n id_column?: string | null;\n id_from?: string[] | null;\n key_strategy?: string | null;\n confidence?: number | null;\n why?: string | null;\n}\n\nfunction entityViews(m: Mapping): EntityView[] {\n if (Array.isArray(m.entities) && m.entities.length > 0) {\n return m.entities.map((e: any) => ({\n name: e.name,\n type_name: e.type_name,\n id_column: e.id_column,\n id_from: e.id_from,\n key_strategy: e.key_strategy ?? null,\n confidence: e.confidence,\n why: e.why,\n }));\n }\n return [\n {\n name: m.entity_type,\n type_name: m.entity_type,\n key_strategy: m.key_strategy ?? null,\n confidence: m.confidence,\n why: m.why,\n },\n ];\n}\n\nfunction heldTypes(m: Mapping): any[] {\n const types = m.ontology_extensions?.types;\n return Array.isArray(types) ? types.filter((t: any) => t.held_for_review) : [];\n}\n\n/** Strip response-only audit fields (violations, inference_audit, profile) and\n * keep only what /ingest/csv/rows applies. Held type extensions are dropped\n * unless explicitly approved — same gate the Explorer applies on confirm. */\nfunction buildMappingForIngest(m: Mapping, approved: Set<string>): Mapping {\n const out: Mapping = { entity_type: m.entity_type, columns: m.columns };\n if (m.entities) out.entities = m.entities;\n if (m.relationships) out.relationships = m.relationships;\n const types = m.ontology_extensions?.types;\n if (Array.isArray(types)) {\n out.ontology_extensions = {\n types: types.filter(\n (t: any) => !t.held_for_review || approved.has(t.type_name),\n ),\n };\n }\n return out;\n}\n\nfunction fmtConf(v: any): string {\n if (v == null) return \"\";\n const n = Number(v);\n if (Number.isNaN(n)) return \"\";\n return dim(` (${n.toFixed(2)}${n < 0.7 ? \" !\" : \"\"})`);\n}\n\nfunction renderMapping(\n m: Mapping,\n info: { totalRows: number; rowsProfiled: number },\n): void {\n const w = (s: string) => process.stdout.write(s);\n w(\n \"\\n\" +\n bold(\"Proposed schema\") +\n dim(\n ` (profiled ${info.rowsProfiled.toLocaleString()} of ${info.totalRows.toLocaleString()} rows)`,\n ) +\n \"\\n\",\n );\n w(dim(\"Review how the data maps to the graph before any rows are written.\") + \"\\n\\n\");\n\n const ents = entityViews(m);\n const multi = Array.isArray(m.entities) && m.entities.length > 0;\n w(bold(\"Entities & keys\") + \"\\n\");\n for (const e of ents) {\n const key = e.id_column\n ? `key: ${e.id_column}`\n : e.id_from && e.id_from.length\n ? `key: ${e.id_from.join(\" + \")}`\n : e.key_strategy === \"synthetic\"\n ? \"key: (synthetic)\"\n : \"key: —\";\n w(` • ${bold(e.type_name)} ${dim(key)}${fmtConf(e.confidence)}\\n`);\n if (e.why) w(` ${dim(e.why)}\\n`);\n const cols = (m.columns ?? []).filter((col: any) =>\n multi ? col.entity === e.name : true,\n );\n for (const col of cols) {\n const role =\n col.role === \"type_id\"\n ? \"key \"\n : col.role === \"relationship\"\n ? \"edge\"\n : \"attr\";\n let detail = \"\";\n if (col.role === \"relationship\" && col.target_type)\n detail = ` → ${col.target_type}`;\n else if (\n col.role === \"attribute\" &&\n col.attribute_name &&\n col.attribute_name !== col.column_name\n )\n detail = ` as ${col.attribute_name}`;\n const dt =\n col.datatype && col.datatype !== \"string\"\n ? \" \" + dim(`[${col.datatype}]`)\n : \"\";\n w(\n ` ${dim(\"[\" + role + \"]\")} ${col.column_name}${detail}${dt}${fmtConf(col.confidence)}\\n`,\n );\n }\n }\n\n const rels = m.relationships ?? [];\n if (rels.length) {\n w(\"\\n\" + bold(\"Edges\") + \"\\n\");\n for (const r of rels)\n w(` • ${r.subject} ${dim(r.predicate)} ${r.object}${fmtConf(r.confidence)}\\n`);\n }\n\n const vio = m.violations ?? [];\n if (vio.length) {\n w(\n \"\\n\" +\n dim(\n `Refute pass corrected ${vio.length} issue${vio.length === 1 ? \"\" : \"s\"}: ${vio\n .map((v: any) => v.template)\n .join(\", \")}`,\n ) +\n \"\\n\",\n );\n }\n}\n\n/** Interactive confirm/override gate, passed to client.ingest as\n * onSchemaInferred. Returns the mapping to ingest, or null to cancel. */\nasync function reviewMapping(\n m: Mapping,\n info: { totalRows: number; rowsProfiled: number },\n): Promise<Mapping | null> {\n renderMapping(m, info);\n const approved = new Set<string>();\n const held = heldTypes(m);\n if (held.length) {\n process.stdout.write(\n \"\\n\" +\n bold(`${held.length} new type${held.length === 1 ? \"\" : \"s\"} held for review`) +\n dim(\" — approve to create, or skip to leave for later\") +\n \"\\n\",\n );\n for (const t of held) {\n const from = t.promoted_from_attribute\n ? dim(` (from \"${t.promoted_from_attribute}\")`)\n : \"\";\n process.stdout.write(` • ${t.type_name}${from}${fmtConf(t.confidence)}\\n`);\n if (await confirm(` Approve \"${t.type_name}\"?`)) approved.add(t.type_name);\n }\n }\n process.stdout.write(\"\\n\");\n const ok = await confirmYes(\n `Apply this mapping and ingest ${info.totalRows.toLocaleString()} rows?`,\n );\n if (!ok) return null;\n return buildMappingForIngest(m, approved);\n}\n\nconst program = new Command();\nprogram\n .name(\"cograph\")\n .description(\"Cograph Knowledge Graph CLI\")\n .version(pkgVersion())\n // Default action when no subcommand is given: drop into the interactive\n // shell. So `cograph` (or `npx cograph`) Just Works for the common case;\n // subcommands like `cograph ingest <file>` still route to their own\n // actions because commander dispatches subcommands first.\n .option(\"--local\", \"Use http://localhost:8000 and skip login (self-hosted)\")\n .option(\"--no-login\", \"Skip browser login (assume open-access backend)\")\n .option(\n \"--tenant <id>\",\n \"Target a specific tenant for this command (overrides the saved default)\",\n )\n .action(async (opts: { local?: boolean; login?: boolean }) => {\n const { runShell } = await import(\"./shell.js\");\n await runShell({\n local: opts.local,\n // commander's --no-login inverts: opts.login === false when flag passed.\n noLogin: opts.login === false,\n });\n });\n\n// ---------------------------------------------------------------------------\n// kg\n// ---------------------------------------------------------------------------\n\nconst kg = program.command(\"kg\").description(\"Manage knowledge graphs\");\n\nkg.command(\"list\")\n .description(\"List knowledge graphs\")\n .action(async () => {\n await withErrors(async () => {\n const kgs = await client().listKgs();\n if (!kgs.length) {\n process.stdout.write(\n \"No knowledge graphs. Create one with: cograph kg create <name>\\n\",\n );\n return;\n }\n for (const k of kgs) {\n const name = String(k.name ?? \"?\");\n const triples = Number(k.triple_count ?? 0);\n const desc = k.description ? ` — ${k.description}` : \"\";\n const padName = name.padEnd(20, \" \");\n const padTriples = String(triples).padStart(6, \" \");\n process.stdout.write(` ${padName} ${padTriples} triples${desc}\\n`);\n }\n });\n });\n\nkg.command(\"create <name>\")\n .description(\"Create a knowledge graph\")\n .option(\"-d, --description <text>\", \"Description\")\n .action(async (name: string, opts: { description?: string }) => {\n await withErrors(async () => {\n const created = await client().createKg(name, opts.description);\n process.stdout.write(`Created knowledge graph: ${created.name ?? name}\\n`);\n });\n });\n\nkg.command(\"delete <name>\")\n .description(\"Delete a knowledge graph\")\n .action(async (name: string) => {\n await withErrors(async () => {\n await client().deleteKg(name);\n process.stdout.write(`Deleted knowledge graph: ${name}\\n`);\n });\n });\n\n// ---------------------------------------------------------------------------\n// tenant\n// ---------------------------------------------------------------------------\n\nconst tenantCmd = program\n .command(\"tenant\")\n .description(\"Show or switch the active tenant\");\n\ntenantCmd\n .command(\"current\", { isDefault: true })\n .description(\"Show the active tenant\")\n .action(() => {\n const active = client().tenant;\n const saved = readConfig().tenant;\n process.stdout.write(`Active tenant: ${bold(active)}\\n`);\n process.stdout.write(\n saved\n ? dim(` saved default in ${configPathForDisplay()}\\n`)\n : dim(` (built-in default — set one with: cograph tenant use <id>)\\n`),\n );\n });\n\ntenantCmd\n .command(\"list\")\n .description(\"List the tenants you can access\")\n .action(async () => {\n await withErrors(async () => {\n const c = client();\n let tenants: Array<{ id: string; label: string }>;\n try {\n tenants = await c.listTenants();\n } catch (err) {\n if (err instanceof CographError && err.status === 501) {\n fail(\n \"This backend doesn't support tenant management (no tenant provider configured).\",\n );\n }\n throw err;\n }\n if (!tenants.length) {\n process.stdout.write(\"No tenants found for your account.\\n\");\n return;\n }\n const active = c.tenant;\n for (const t of tenants) {\n const marker = t.id === active ? \"*\" : \" \";\n process.stdout.write(` ${marker} ${t.id.padEnd(24)} ${dim(t.label)}\\n`);\n }\n process.stdout.write(dim(`\\nSwitch with: cograph tenant use <id>\\n`));\n });\n });\n\ntenantCmd\n .command(\"use <id>\")\n .description(\"Set the active tenant (saved to ~/.cograph/config.json)\")\n .action((id: string) => {\n writeConfig({ tenant: id });\n process.stdout.write(`${bold(\"✓\")} Active tenant set to ${bold(id)}\\n`);\n process.stdout.write(dim(`Saved to ${configPathForDisplay()}\\n`));\n });\n\n// ---------------------------------------------------------------------------\n// ingest\n// ---------------------------------------------------------------------------\n\nprogram\n .command(\"ingest [file]\")\n .description(\"Ingest data from a file or --text\")\n .option(\"-t, --text <text>\", \"Inline text to ingest\")\n .option(\"--kg <name>\", \"Target knowledge graph name\")\n .option(\n \"-f, --format <fmt>\",\n \"Override format detection (text|csv|json)\",\n )\n .option(\n \"-y, --yes\",\n \"Skip the CSV schema review and apply the inferred mapping non-interactively\",\n )\n .action(\n async (\n file: string | undefined,\n opts: { text?: string; kg?: string; format?: string; yes?: boolean },\n ) => {\n await withErrors(async () => {\n const c = client();\n if (opts.text) {\n process.stdout.write(\n `Ingesting text (${opts.text.length.toLocaleString()} chars)...\\n`,\n );\n const result = await c.ingest(opts.text, {\n kg: opts.kg,\n contentType: opts.format ?? \"text\",\n });\n printIngestResult(result);\n return;\n }\n if (!file) {\n fail(\"Provide a file or --text\");\n }\n // For CSV, interpose the same schema review/confirm gate the Explorer\n // shows. Interactive on a TTY unless --yes; otherwise apply the\n // inferred mapping as-is (held type extensions auto-approved, matching\n // the prior non-interactive behavior). Hook is ignored for text/json.\n const interactive =\n Boolean(process.stdin.isTTY) && Boolean(process.stdout.isTTY) && !opts.yes;\n const onSchemaInferred = interactive\n ? reviewMapping\n : (m: Mapping) =>\n Promise.resolve(\n buildMappingForIngest(\n m,\n new Set(heldTypes(m).map((t: any) => t.type_name)),\n ),\n );\n // ingest() handles file reading + format detection + CSV two-step flow.\n process.stdout.write(`Ingesting ${file}...\\n`);\n const result = await c.ingest(file, {\n kg: opts.kg,\n contentType: opts.format,\n onSchemaInferred,\n });\n if ((result as Record<string, unknown>).cancelled) {\n process.stdout.write(\"Cancelled — nothing was written.\\n\");\n return;\n }\n printIngestResult(result);\n });\n },\n );\n\nfunction printIngestResult(result: Record<string, unknown>): void {\n const num = (k: string) => Number(result[k] ?? 0);\n process.stdout.write(` Entities extracted: ${num(\"entities_extracted\")}\\n`);\n process.stdout.write(` Entities resolved: ${num(\"entities_resolved\")}\\n`);\n process.stdout.write(` Triples inserted: ${num(\"triples_inserted\")}\\n`);\n const types = result.types_created;\n if (Array.isArray(types) && types.length) {\n process.stdout.write(` Types created: ${types.join(\", \")}\\n`);\n }\n const rejections = result.rejections;\n if (Array.isArray(rejections) && rejections.length) {\n process.stdout.write(` Rejections: ${rejections.length}\\n`);\n }\n}\n\n// ---------------------------------------------------------------------------\n// ask\n// ---------------------------------------------------------------------------\n\nprogram\n .command(\"ask <question>\")\n .description(\"Ask a natural language question\")\n .option(\"--kg <name>\", \"Knowledge graph to query\")\n .option(\"-d, --debug\", \"Show SPARQL and latency breakdown\")\n .option(\"-m, --model <model>\", \"Override query model\")\n .action(\n async (\n question: string,\n opts: { kg?: string; debug?: boolean; model?: string },\n ) => {\n await withErrors(async () => {\n if (opts.model) process.stdout.write(`Model: ${opts.model}\\n`);\n process.stdout.write(`Q: ${question}\\n`);\n process.stdout.write(\"Generating answer...\\n\");\n const t0 = Date.now();\n const result = await client().ask(question, {\n kg: opts.kg,\n model: opts.model,\n });\n const roundtripMs = Date.now() - t0;\n process.stdout.write(`\\nA: ${result.answer ?? \"No answer\"}\\n`);\n if (opts.debug) {\n process.stdout.write(`\\nSPARQL:\\n${result.sparql ?? \"\"}\\n`);\n const timing = (result.timing ?? {}) as Record<string, unknown>;\n if (Object.keys(timing).length) {\n process.stdout.write(`\\n${\"─\".repeat(40)}\\n`);\n process.stdout.write(\n `${\"Stage\".padEnd(25)} ${\"Time\".padStart(10)}\\n`,\n );\n process.stdout.write(`${\"─\".repeat(40)}\\n`);\n for (const [key, val] of Object.entries(timing)) {\n if (key === \"attempts\") {\n process.stdout.write(\n `${\"Attempts\".padEnd(25)} ${String(val).padStart(10)}\\n`,\n );\n } else if (typeof val === \"string\") {\n const label = key\n .replace(/_/g, \" \")\n .replace(/\\b\\w/g, (c) => c.toUpperCase());\n process.stdout.write(\n `${label.padEnd(25)} ${val.padStart(10)}\\n`,\n );\n } else {\n const label = key\n .replace(/_ms$/, \"\")\n .replace(/_/g, \" \")\n .replace(/\\b\\w/g, (c) => c.toUpperCase());\n const num = typeof val === \"number\" ? val : Number(val);\n process.stdout.write(\n `${label.padEnd(25)} ${num.toFixed(1).padStart(8)}ms\\n`,\n );\n }\n }\n process.stdout.write(`${\"─\".repeat(40)}\\n`);\n process.stdout.write(\n `${\"Client roundtrip\".padEnd(25)} ${roundtripMs.toFixed(1).padStart(8)}ms\\n`,\n );\n }\n }\n });\n },\n );\n\n// ---------------------------------------------------------------------------\n// ontology\n// ---------------------------------------------------------------------------\n\nconst onto = program.command(\"ontology\").description(\"View ontology\");\n\nonto\n .command(\"types\")\n .description(\"List ontology types\")\n .action(async () => {\n await withErrors(async () => {\n const types = await client().ontologyTypes();\n if (!types.length) {\n process.stdout.write(\"No ontology types defined.\\n\");\n return;\n }\n for (const t of types) {\n const parent = t.parent_type\n ? ` (subClassOf ${t.parent_type})`\n : \"\";\n const desc = t.description ? ` — ${t.description}` : \"\";\n process.stdout.write(` ${t.name}${parent}${desc}\\n`);\n const attrs = (t.attributes ?? []) as Array<Record<string, unknown>>;\n for (const a of attrs) {\n process.stdout.write(\n ` .${a.name} (${a.datatype ?? \"string\"})\\n`,\n );\n }\n }\n });\n });\n\n// ---------------------------------------------------------------------------\n// er — entity resolution\n// ---------------------------------------------------------------------------\n\nconst er = program.command(\"er\").description(\"Entity resolution\");\n\ner.command(\"rebuild\")\n .description(\n \"Second pass: collapse intra-batch entity fragments in an ingested KG\",\n )\n .requiredOption(\"--kg <name>\", \"Knowledge graph to rebuild\")\n .action(async (opts: { kg: string }) => {\n await withErrors(async () => {\n process.stdout.write(`Rebuilding entity resolution for ${opts.kg}…\\n`);\n const report = await client().erRebuild(opts.kg);\n const types = (report.types ?? []) as Array<Record<string, unknown>>;\n for (const t of types) {\n const name = String(t.type ?? \"?\").padEnd(16, \" \");\n process.stdout.write(\n ` ${name} ${t.entities_before} → ${t.entities_after}` +\n ` (−${t.fragments_absorbed} fragments across ${t.clusters_merged} clusters)\\n`,\n );\n }\n process.stdout.write(\n `Done. ${report.fragments_absorbed_total ?? 0} fragments absorbed.\\n`,\n );\n });\n });\n\n// ---------------------------------------------------------------------------\n// enrich\n// ---------------------------------------------------------------------------\n\nprogram\n .command(\"enrich\")\n .description(\"Agentic enrichment — fill an attribute from web sources, with citations\")\n .requiredOption(\"--kg <name>\", \"Knowledge graph\")\n .requiredOption(\"--type <Type>\", \"Entity type to enrich\")\n .requiredOption(\"--attribute <attr>\", \"Attribute to fill (e.g. reviews, description)\")\n .option(\"--tier <tier>\", \"lite | base | core | pro (paid adapters live in core/pro)\", \"core\")\n .option(\"--limit <n>\", \"Max entities to enrich\", \"3\")\n .option(\"--apply\", \"Write results to the graph (with provenance), not just stage\")\n .action(\n async (opts: {\n kg: string;\n type: string;\n attribute: string;\n tier: string;\n limit: string;\n apply?: boolean;\n }) => {\n await withErrors(async () => {\n const c = client();\n process.stdout.write(\n `Enriching ${opts.type}.${opts.attribute} in ${opts.kg} (tier ${opts.tier})…\\n`,\n );\n const created = await c.enrichRun({\n kg_name: opts.kg,\n type_name: opts.type,\n attributes: [opts.attribute],\n tier: opts.tier as \"lite\" | \"base\" | \"core\" | \"pro\",\n limit: Number(opts.limit),\n conflict_policy: opts.apply ? \"overwrite\" : \"stage\",\n confidence_min: 0.1,\n });\n const terminal = [\"applied\", \"review\", \"failed\", \"cancelled\"];\n let job = await c.enrichJob(created.job_id);\n for (let i = 0; i < 40 && !terminal.includes(job.status); i++) {\n await new Promise((r) => setTimeout(r, 2000));\n job = await c.enrichJob(created.job_id);\n }\n const filled = (job.results ?? []).filter((r) => r.verdict);\n if (!filled.length) {\n process.stdout.write(\"No enrichment results (no source returned a value).\\n\");\n return;\n }\n for (const r of filled) {\n const v = r.verdict!;\n process.stdout.write(`\\n ${r.entity_uri.split(\"/\").pop()}\\n`);\n process.stdout.write(` ${r.attribute}: ${v.value}\\n`);\n process.stdout.write(\n ` source: ${v.source}${v.source_url ? \" \" + v.source_url : \"\"}\\n`,\n );\n if (v.reasoning) process.stdout.write(` ${v.reasoning}\\n`);\n }\n process.stdout.write(\n `\\n${opts.apply ? \"Applied to the graph (value + provenance triples).\" : \"Staged for review — re-run with --apply to write.\"}\\n`,\n );\n });\n },\n );\n\n// ---------------------------------------------------------------------------\n// vis\n// ---------------------------------------------------------------------------\n\nprogram\n .command(\"vis <type>\")\n .description(\"Visualise a type — instance count, attribute coverage, top relations\")\n .option(\"--kg <name>\", \"Knowledge graph to inspect\")\n .action(async (typeName: string, opts: { kg?: string }) => {\n await withErrors(async () => {\n const c = client();\n\n // Resolve KG: use --kg flag, or pick first available KG.\n let kg = opts.kg;\n if (!kg) {\n const kgs = await c.listKgs();\n if (!kgs.length) {\n fail(\"No knowledge graphs found. Run 'cograph ingest' first.\");\n }\n kg = String(kgs[0].name ?? \"\");\n }\n\n let summary: import(\"./client.js\").TypeSummary;\n try {\n summary = await c.typeSummary(kg, typeName);\n } catch {\n fail(`Type '${typeName}' not found in KG '${kg}'.`);\n }\n\n const { entity_count, attributes, relationships, description, parent_type } = summary;\n const header = `${typeName}${parent_type ? ` (subClassOf ${parent_type})` : \"\"} — ${entity_count.toLocaleString()} instances`;\n process.stdout.write(`\\n${header}\\n${\"─\".repeat(header.length)}\\n`);\n if (description) process.stdout.write(`${description}\\n`);\n\n // Attributes table\n if (attributes.length) {\n process.stdout.write(`\\nAttributes (${attributes.length}):\\n`);\n const sorted = [...attributes].sort((a, b) => b.coverage_pct - a.coverage_pct);\n for (const a of sorted.slice(0, 10)) {\n const bar = \"█\".repeat(Math.round(a.coverage_pct / 10));\n const pct = `${a.coverage_pct}%`.padStart(6);\n process.stdout.write(` ${a.name.padEnd(24)} ${pct} ${bar}\\n`);\n }\n if (attributes.length > 10) {\n process.stdout.write(` … and ${attributes.length - 10} more\\n`);\n }\n }\n\n // Relations table\n if (relationships.length) {\n process.stdout.write(`\\nRelationships (${relationships.length}):\\n`);\n for (const r of relationships.slice(0, 8)) {\n const target = r.target_type ? ` → ${r.target_type}` : \"\";\n const pct = `${r.coverage_pct}%`.padStart(6);\n const avg = r.avg_degree ? ` (avg ${r.avg_degree})` : \"\";\n process.stdout.write(` ${(r.name + target).padEnd(36)} ${pct}${avg}\\n`);\n }\n }\n\n const explorerUrl = `https://cograph.cloud/dashboard/explore/${encodeURIComponent(typeName)}?kg=${encodeURIComponent(kg)}`;\n process.stdout.write(`\\n→ Open visually at ${explorerUrl}\\n`);\n process.stdout.write(\" (Sign in for interactive viz, search, and click-to-enrich.)\\n\\n\");\n });\n });\n\n// ---------------------------------------------------------------------------\n// clear\n// ---------------------------------------------------------------------------\n\nprogram\n .command(\"clear\")\n .description(\"Clear data\")\n .option(\"--kg <name>\", \"Clear a specific knowledge graph\")\n .option(\n \"--include-ontology\",\n \"Also clear the ontology (only meaningful when --kg is omitted)\",\n false,\n )\n .option(\"-y, --yes\", \"Skip confirmation\", false)\n .action(\n async (opts: { kg?: string; includeOntology?: boolean; yes?: boolean }) => {\n await withErrors(async () => {\n let msg: string;\n if (opts.kg) {\n msg = `Clear KG '${opts.kg}'?`;\n } else if (opts.includeOntology) {\n msg = \"Clear EVERYTHING including ontology?\";\n } else {\n msg = \"Clear all instance data (ontology preserved)?\";\n }\n\n if (!opts.yes) {\n const ok = await confirm(msg);\n if (!ok) {\n process.stdout.write(\"Cancelled.\\n\");\n return;\n }\n }\n\n const c = client();\n if (opts.kg) {\n await c.deleteKg(opts.kg);\n process.stdout.write(`Cleared KG: ${opts.kg}\\n`);\n return;\n }\n\n // Bulk-clear via /query + DELETE /triples — same loop the Python CLI uses.\n const tenant = c.tenant;\n const baseUrl = `${c.baseUrl}/graphs/${tenant}`;\n const headers: Record<string, string> = {\n \"Content-Type\": \"application/json\",\n };\n if (c.apiKey) headers[\"X-API-Key\"] = c.apiKey;\n\n const filters = opts.includeOntology\n ? \"\"\n : `FILTER(CONTAINS(STR(?s), '/entities/') || CONTAINS(STR(?s), '/onto/') || CONTAINS(STR(?s), '/kgs/'))`;\n const query = `SELECT ?s ?p ?o FROM <https://cograph.tech/graphs/${tenant}> WHERE { ?s ?p ?o . ${filters} } LIMIT 1000`;\n\n process.stdout.write(\"Clearing...\\n\");\n let deleted = 0;\n for (let i = 0; i < 50; i++) {\n const fetchRes = await fetch(`${baseUrl}/query`, {\n method: \"POST\",\n headers,\n body: JSON.stringify({ query }),\n });\n if (!fetchRes.ok) break;\n const data = (await fetchRes.json()) as {\n bindings?: Array<Record<string, unknown>>;\n };\n const bindings = data.bindings ?? [];\n if (!bindings.length) break;\n const triples = bindings\n .filter((b) => b.s)\n .map((b) => ({\n subject: b.s,\n predicate: b.p,\n object: b.o,\n }));\n for (let j = 0; j < triples.length; j += 100) {\n await fetch(`${baseUrl}/triples`, {\n method: \"DELETE\",\n headers,\n body: JSON.stringify({ triples: triples.slice(j, j + 100) }),\n });\n }\n deleted += triples.length;\n }\n process.stdout.write(`Deleted ${deleted} triples\\n`);\n });\n },\n );\n\n// ---------------------------------------------------------------------------\n// login\n// ---------------------------------------------------------------------------\n\nprogram\n .command(\"login\")\n .description(\"Sign in via your browser and save an API key\")\n .action(async () => {\n const { runLogin } = await import(\"./login.js\");\n await runLogin();\n });\n\n// ---------------------------------------------------------------------------\n// shell\n// ---------------------------------------------------------------------------\n\nprogram\n .command(\"shell\")\n .description(\"Start an interactive REPL\")\n .option(\"--kg <name>\", \"Knowledge graph to use\")\n .option(\"--local\", \"Use http://localhost:8000 and skip login (self-hosted)\")\n .option(\"--no-login\", \"Skip browser login (assume open-access backend)\")\n .action(\n async (opts: { kg?: string; local?: boolean; login?: boolean }) => {\n // Parent program also accepts --local/--no-login (so `cograph --local`\n // works without a subcommand). When commander parses\n // `cograph shell --local`, the parent sees --local first and the\n // subcommand never gets it — so merge from program.opts() too.\n const parentOpts = program.opts() as {\n local?: boolean;\n login?: boolean;\n };\n const { runShell } = await import(\"./shell.js\");\n await runShell({\n kg: opts.kg,\n local: opts.local || parentOpts.local,\n noLogin: opts.login === false || parentOpts.login === false,\n });\n },\n );\n\n// ---------------------------------------------------------------------------\n\nprogram.parseAsync(process.argv).catch((err) => {\n fail(`Error: ${err instanceof Error ? err.message : String(err)}`);\n});\n\n// silence unused import warning if ever needed\nvoid 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[];\n if (vio.length) {\n w(\n \"\\n\" +\n dim(\n `Refute pass corrected ${vio.length} issue${vio.length === 1 ? \"\" : \"s\"}: ${vio\n .map((v: any) => v.template)\n .join(\", \")}`,\n ) +\n \"\\n\",\n );\n }\n}\n\n/** Interactive confirm/override gate, passed to client.ingest as\n * onSchemaInferred. Returns the mapping to ingest, or null to cancel. */\nasync function reviewMapping(\n m: Mapping,\n info: { totalRows: number; rowsProfiled: number },\n): Promise<Mapping | null> {\n renderMapping(m, info);\n const approved = new Set<string>();\n const held = heldTypes(m);\n if (held.length) {\n process.stdout.write(\n \"\\n\" +\n bold(`${held.length} new type${held.length === 1 ? \"\" : \"s\"} held for review`) +\n dim(\" — approve to create, or skip to leave for later\") +\n \"\\n\",\n );\n for (const t of held) {\n const from = t.promoted_from_attribute\n ? dim(` (from \"${t.promoted_from_attribute}\")`)\n : \"\";\n process.stdout.write(` • ${t.type_name}${from}${fmtConf(t.confidence)}\\n`);\n if (await confirm(` Approve \"${t.type_name}\"?`)) approved.add(t.type_name);\n }\n }\n process.stdout.write(\"\\n\");\n const ok = await confirmYes(\n `Apply this mapping and ingest ${info.totalRows.toLocaleString()} rows?`,\n );\n if (!ok) return null;\n return buildMappingForIngest(m, approved);\n}\n\nconst program = new Command();\nprogram\n .name(\"cograph\")\n .description(\"Cograph Knowledge Graph CLI\")\n .version(pkgVersion())\n // Default action when no subcommand is given: drop into the interactive\n // shell. So `cograph` (or `npx cograph`) Just Works for the common case;\n // subcommands like `cograph ingest <file>` still route to their own\n // actions because commander dispatches subcommands first.\n .option(\"--local\", \"Use http://localhost:8000 and skip login (self-hosted)\")\n .option(\"--no-login\", \"Skip browser login (assume open-access backend)\")\n .option(\n \"--tenant <id>\",\n \"Target a specific tenant for this command (overrides the saved default)\",\n )\n .action(async (opts: { local?: boolean; login?: boolean }) => {\n const { runShell } = await import(\"./shell.js\");\n await runShell({\n local: opts.local,\n // commander's --no-login inverts: opts.login === false when flag passed.\n noLogin: opts.login === false,\n });\n });\n\n// ---------------------------------------------------------------------------\n// kg\n// ---------------------------------------------------------------------------\n\nconst kg = program.command(\"kg\").description(\"Manage knowledge graphs\");\n\nkg.command(\"list\")\n .description(\"List knowledge graphs\")\n .action(async () => {\n await withErrors(async () => {\n const kgs = await client().listKgs();\n if (!kgs.length) {\n process.stdout.write(\n \"No knowledge graphs. Create one with: cograph kg create <name>\\n\",\n );\n return;\n }\n for (const k of kgs) {\n const name = String(k.name ?? \"?\");\n const triples = Number(k.triple_count ?? 0);\n const desc = k.description ? ` — ${k.description}` : \"\";\n const padName = name.padEnd(20, \" \");\n const padTriples = String(triples).padStart(6, \" \");\n process.stdout.write(` ${padName} ${padTriples} triples${desc}\\n`);\n }\n });\n });\n\nkg.command(\"create <name>\")\n .description(\"Create a knowledge graph\")\n .option(\"-d, --description <text>\", \"Description\")\n .action(async (name: string, opts: { description?: string }) => {\n await withErrors(async () => {\n const created = await client().createKg(name, opts.description);\n process.stdout.write(`Created knowledge graph: ${created.name ?? name}\\n`);\n });\n });\n\nkg.command(\"delete <name>\")\n .description(\"Delete a knowledge graph\")\n .action(async (name: string) => {\n await withErrors(async () => {\n await client().deleteKg(name);\n process.stdout.write(`Deleted knowledge graph: ${name}\\n`);\n });\n });\n\n// ---------------------------------------------------------------------------\n// tenant\n// ---------------------------------------------------------------------------\n\nconst tenantCmd = program\n .command(\"tenant\")\n .description(\"Show or switch the active tenant\");\n\ntenantCmd\n .command(\"current\", { isDefault: true })\n .description(\"Show the active tenant\")\n .action(() => {\n const active = client().tenant;\n const saved = readConfig().tenant;\n process.stdout.write(`Active tenant: ${bold(active)}\\n`);\n process.stdout.write(\n saved\n ? dim(` saved default in ${configPathForDisplay()}\\n`)\n : dim(` (built-in default — set one with: cograph tenant use <id>)\\n`),\n );\n });\n\ntenantCmd\n .command(\"list\")\n .description(\"List the tenants you can access\")\n .action(async () => {\n await withErrors(async () => {\n const c = client();\n let tenants: Array<{ id: string; label: string }>;\n try {\n tenants = await c.listTenants();\n } catch (err) {\n if (err instanceof CographError && err.status === 501) {\n fail(\n \"This backend doesn't support tenant management (no tenant provider configured).\",\n );\n }\n throw err;\n }\n if (!tenants.length) {\n process.stdout.write(\"No tenants found for your account.\\n\");\n return;\n }\n const active = c.tenant;\n for (const t of tenants) {\n const marker = t.id === active ? \"*\" : \" \";\n process.stdout.write(` ${marker} ${t.id.padEnd(24)} ${dim(t.label)}\\n`);\n }\n process.stdout.write(dim(`\\nSwitch with: cograph tenant use <id>\\n`));\n });\n });\n\ntenantCmd\n .command(\"use <id>\")\n .description(\"Set the active tenant (saved to ~/.cograph/config.json)\")\n .action((id: string) => {\n writeConfig({ tenant: id });\n process.stdout.write(`${bold(\"✓\")} Active tenant set to ${bold(id)}\\n`);\n process.stdout.write(dim(`Saved to ${configPathForDisplay()}\\n`));\n });\n\n// ---------------------------------------------------------------------------\n// ingest\n// ---------------------------------------------------------------------------\n\nprogram\n .command(\"ingest [file]\")\n .description(\"Ingest data from a file or --text\")\n .option(\"-t, --text <text>\", \"Inline text to ingest\")\n .option(\"--kg <name>\", \"Target knowledge graph name\")\n .option(\n \"-f, --format <fmt>\",\n \"Override format detection (text|csv|json)\",\n )\n .option(\n \"-y, --yes\",\n \"Skip the CSV schema review and apply the inferred mapping non-interactively\",\n )\n .action(\n async (\n file: string | undefined,\n opts: { text?: string; kg?: string; format?: string; yes?: boolean },\n ) => {\n await withErrors(async () => {\n const c = client();\n if (opts.text) {\n process.stdout.write(\n `Ingesting text (${opts.text.length.toLocaleString()} chars)...\\n`,\n );\n const result = await c.ingest(opts.text, {\n kg: opts.kg,\n contentType: opts.format ?? \"text\",\n });\n printIngestResult(result);\n return;\n }\n if (!file) {\n fail(\"Provide a file or --text\");\n }\n // For CSV, interpose the same schema review/confirm gate the Explorer\n // shows. Interactive on a TTY unless --yes; otherwise apply the\n // inferred mapping as-is (held type extensions auto-approved, matching\n // the prior non-interactive behavior). Hook is ignored for text/json.\n const interactive =\n Boolean(process.stdin.isTTY) && Boolean(process.stdout.isTTY) && !opts.yes;\n const onSchemaInferred = interactive\n ? reviewMapping\n : (m: Mapping) =>\n Promise.resolve(\n buildMappingForIngest(\n m,\n new Set(heldTypes(m).map((t: any) => t.type_name)),\n ),\n );\n // ingest() handles file reading + format detection + CSV two-step flow.\n process.stdout.write(`Ingesting ${file}...\\n`);\n const result = await c.ingest(file, {\n kg: opts.kg,\n contentType: opts.format,\n onSchemaInferred,\n });\n if ((result as Record<string, unknown>).cancelled) {\n process.stdout.write(\"Cancelled — nothing was written.\\n\");\n return;\n }\n printIngestResult(result);\n });\n },\n );\n\nfunction printIngestResult(result: Record<string, unknown>): void {\n const num = (k: string) => Number(result[k] ?? 0);\n process.stdout.write(` Entities extracted: ${num(\"entities_extracted\")}\\n`);\n process.stdout.write(` Entities resolved: ${num(\"entities_resolved\")}\\n`);\n process.stdout.write(` Triples inserted: ${num(\"triples_inserted\")}\\n`);\n const types = result.types_created;\n if (Array.isArray(types) && types.length) {\n process.stdout.write(` Types created: ${types.join(\", \")}\\n`);\n }\n const rejections = result.rejections;\n if (Array.isArray(rejections) && rejections.length) {\n process.stdout.write(` Rejections: ${rejections.length}\\n`);\n }\n}\n\n// ---------------------------------------------------------------------------\n// ask\n// ---------------------------------------------------------------------------\n\nprogram\n .command(\"ask <question>\")\n .description(\"Ask a natural language question\")\n .option(\"--kg <name>\", \"Knowledge graph to query\")\n .option(\"-d, --debug\", \"Show SPARQL and latency breakdown\")\n .option(\"-m, --model <model>\", \"Override query model\")\n .action(\n async (\n question: string,\n opts: { kg?: string; debug?: boolean; model?: string },\n ) => {\n await withErrors(async () => {\n if (opts.model) process.stdout.write(`Model: ${opts.model}\\n`);\n process.stdout.write(`Q: ${question}\\n`);\n process.stdout.write(\"Generating answer...\\n\");\n const t0 = Date.now();\n const result = await client().ask(question, {\n kg: opts.kg,\n model: opts.model,\n });\n const roundtripMs = Date.now() - t0;\n process.stdout.write(`\\nA: ${result.answer ?? \"No answer\"}\\n`);\n if (opts.debug) {\n process.stdout.write(`\\nSPARQL:\\n${result.sparql ?? \"\"}\\n`);\n const timing = (result.timing ?? {}) as Record<string, unknown>;\n if (Object.keys(timing).length) {\n process.stdout.write(`\\n${\"─\".repeat(40)}\\n`);\n process.stdout.write(\n `${\"Stage\".padEnd(25)} ${\"Time\".padStart(10)}\\n`,\n );\n process.stdout.write(`${\"─\".repeat(40)}\\n`);\n for (const [key, val] of Object.entries(timing)) {\n if (key === \"attempts\") {\n process.stdout.write(\n `${\"Attempts\".padEnd(25)} ${String(val).padStart(10)}\\n`,\n );\n } else if (typeof val === \"string\") {\n const label = key\n .replace(/_/g, \" \")\n .replace(/\\b\\w/g, (c) => c.toUpperCase());\n process.stdout.write(\n `${label.padEnd(25)} ${val.padStart(10)}\\n`,\n );\n } else {\n const label = key\n .replace(/_ms$/, \"\")\n .replace(/_/g, \" \")\n .replace(/\\b\\w/g, (c) => c.toUpperCase());\n const num = typeof val === \"number\" ? val : Number(val);\n process.stdout.write(\n `${label.padEnd(25)} ${num.toFixed(1).padStart(8)}ms\\n`,\n );\n }\n }\n process.stdout.write(`${\"─\".repeat(40)}\\n`);\n process.stdout.write(\n `${\"Client roundtrip\".padEnd(25)} ${roundtripMs.toFixed(1).padStart(8)}ms\\n`,\n );\n }\n }\n });\n },\n );\n\n// ---------------------------------------------------------------------------\n// agent — unified Ask-AI agent (POST /graphs/{tenant}/agent)\n// ---------------------------------------------------------------------------\n//\n// The ONE command that reaches the unified agent the web app + MCP already use:\n// it classifies intent server-side (question | enrich | clean | dedup |\n// ontology) and either answers, asks a clarifying question, or proposes a plan\n// to confirm. The discrete commands (ask/enrich/er/ontology) stay as\n// convenient shortcuts; migrating them onto the agent is a deliberate non-goal.\n//\n// Confirm flow (non-interactive): a returned plan is NOT executed automatically.\n// Either re-run with --confirm <plan_id> (the only mutating path), or pass --yes\n// to confirm-and-execute in the same invocation.\n\n/**\n * Core of the `agent` command — extracted so it's unit-testable with a mocked\n * {@link Client} (the commander action below just builds a real client and\n * delegates). Drives the three non-interactive paths:\n * - `--confirm <id>` → execute that plan directly, render the result.\n * - default → one agent turn, render it; if it's a plan, either\n * confirm-and-execute (`--yes`) or print a confirm hint.\n *\n * Exported for tests; not part of the published SDK surface (cli.ts is the bin\n * entry, not in `package.json#exports`).\n */\nexport async function runAgentCommand(\n c: Client,\n message: string,\n opts: { kg?: string; type?: string; yes?: boolean; confirm?: string },\n): Promise<void> {\n // KG resolution mirrors `ask`: an explicit --kg wins, else the SDK's\n // saved/default kg (passing undefined lets the backend use its default).\n const context = { kgName: opts.kg, typeName: opts.type };\n\n // --confirm path: execute the named plan directly and render the result.\n if (opts.confirm) {\n const result = await c.agent({ confirmPlanId: opts.confirm, ...context });\n renderAgentResult(result);\n return;\n }\n\n const result = await c.agent({ message, ...context });\n renderAgentResult(result);\n\n // A plan is the only kind that awaits a follow-up. With --yes we confirm\n // immediately; otherwise we print how to confirm it later.\n if (result.kind === \"plan\") {\n const planId =\n typeof result.plan_id === \"string\" ? result.plan_id : undefined;\n if (!planId) return;\n if (opts.yes) {\n const executed = await c.agent({ confirmPlanId: planId, ...context });\n renderAgentResult(executed);\n } else {\n const flags = [\n opts.kg ? `--kg ${opts.kg}` : \"\",\n opts.type ? `--type ${opts.type}` : \"\",\n ]\n .filter(Boolean)\n .join(\" \");\n const hint = `cograph agent --confirm ${planId}${flags ? \" \" + flags : \"\"} ${JSON.stringify(message)}`;\n process.stdout.write(\n `${dim(\"Confirm & run:\")} ${hint}\\n` +\n `${dim(\" or re-run with --yes to execute now.\")}\\n`,\n );\n }\n }\n}\n\nprogram\n .command(\"agent <message>\")\n .description(\"Talk to the unified Ask-AI agent (answers, plans, and runs actions)\")\n .option(\"--kg <name>\", \"Knowledge graph to operate within\")\n .option(\"--type <Type>\", \"Active type scope (for enrich/clean/dedup planning)\")\n .option(\n \"-y, --yes\",\n \"Auto-confirm and execute a returned plan in the same run\",\n )\n .option(\n \"--confirm <planId>\",\n \"Execute a specific previously-proposed plan id (skips planning)\",\n )\n .action(\n async (\n message: string,\n opts: { kg?: string; type?: string; yes?: boolean; confirm?: string },\n ) => {\n await withErrors(() => runAgentCommand(client(), message, opts));\n },\n );\n\n// ---------------------------------------------------------------------------\n// ontology\n// ---------------------------------------------------------------------------\n\nconst onto = program.command(\"ontology\").description(\"View ontology\");\n\nonto\n .command(\"types\")\n .description(\"List ontology types\")\n .action(async () => {\n await withErrors(async () => {\n const types = await client().ontologyTypes();\n if (!types.length) {\n process.stdout.write(\"No ontology types defined.\\n\");\n return;\n }\n for (const t of types) {\n const parent = t.parent_type\n ? ` (subClassOf ${t.parent_type})`\n : \"\";\n const desc = t.description ? ` — ${t.description}` : \"\";\n process.stdout.write(` ${t.name}${parent}${desc}\\n`);\n const attrs = (t.attributes ?? []) as Array<Record<string, unknown>>;\n for (const a of attrs) {\n process.stdout.write(\n ` .${a.name} (${a.datatype ?? \"string\"})\\n`,\n );\n }\n }\n });\n });\n\n// ---------------------------------------------------------------------------\n// er — entity resolution\n// ---------------------------------------------------------------------------\n\nconst er = program.command(\"er\").description(\"Entity resolution\");\n\ner.command(\"rebuild\")\n .description(\n \"Second pass: collapse intra-batch entity fragments in an ingested KG\",\n )\n .requiredOption(\"--kg <name>\", \"Knowledge graph to rebuild\")\n .action(async (opts: { kg: string }) => {\n await withErrors(async () => {\n process.stdout.write(`Rebuilding entity resolution for ${opts.kg}…\\n`);\n const report = await client().erRebuild(opts.kg);\n const types = (report.types ?? []) as Array<Record<string, unknown>>;\n for (const t of types) {\n const name = String(t.type ?? \"?\").padEnd(16, \" \");\n process.stdout.write(\n ` ${name} ${t.entities_before} → ${t.entities_after}` +\n ` (−${t.fragments_absorbed} fragments across ${t.clusters_merged} clusters)\\n`,\n );\n }\n process.stdout.write(\n `Done. ${report.fragments_absorbed_total ?? 0} fragments absorbed.\\n`,\n );\n });\n });\n\n// ---------------------------------------------------------------------------\n// enrich\n// ---------------------------------------------------------------------------\n\nprogram\n .command(\"enrich\")\n .description(\"Agentic enrichment — fill an attribute from web sources, with citations\")\n .requiredOption(\"--kg <name>\", \"Knowledge graph\")\n .requiredOption(\"--type <Type>\", \"Entity type to enrich\")\n .requiredOption(\"--attribute <attr>\", \"Attribute to fill (e.g. reviews, description)\")\n .option(\"--tier <tier>\", \"lite | base | core | pro (paid adapters live in core/pro)\", \"core\")\n .option(\"--limit <n>\", \"Max entities to enrich\", \"3\")\n .option(\"--apply\", \"Write results to the graph (with provenance), not just stage\")\n .action(\n async (opts: {\n kg: string;\n type: string;\n attribute: string;\n tier: string;\n limit: string;\n apply?: boolean;\n }) => {\n await withErrors(async () => {\n const c = client();\n process.stdout.write(\n `Enriching ${opts.type}.${opts.attribute} in ${opts.kg} (tier ${opts.tier})…\\n`,\n );\n const created = await c.enrichRun({\n kg_name: opts.kg,\n type_name: opts.type,\n attributes: [opts.attribute],\n tier: opts.tier as \"lite\" | \"base\" | \"core\" | \"pro\",\n limit: Number(opts.limit),\n conflict_policy: opts.apply ? \"overwrite\" : \"stage\",\n confidence_min: 0.1,\n });\n const terminal = [\"applied\", \"review\", \"failed\", \"cancelled\"];\n let job = await c.enrichJob(created.job_id);\n for (let i = 0; i < 40 && !terminal.includes(job.status); i++) {\n await new Promise((r) => setTimeout(r, 2000));\n job = await c.enrichJob(created.job_id);\n }\n const filled = (job.results ?? []).filter((r) => r.verdict);\n if (!filled.length) {\n process.stdout.write(\"No enrichment results (no source returned a value).\\n\");\n return;\n }\n for (const r of filled) {\n const v = r.verdict!;\n process.stdout.write(`\\n ${r.entity_uri.split(\"/\").pop()}\\n`);\n process.stdout.write(` ${r.attribute}: ${v.value}\\n`);\n process.stdout.write(\n ` source: ${v.source}${v.source_url ? \" \" + v.source_url : \"\"}\\n`,\n );\n if (v.reasoning) process.stdout.write(` ${v.reasoning}\\n`);\n }\n process.stdout.write(\n `\\n${opts.apply ? \"Applied to the graph (value + provenance triples).\" : \"Staged for review — re-run with --apply to write.\"}\\n`,\n );\n });\n },\n );\n\n// ---------------------------------------------------------------------------\n// vis\n// ---------------------------------------------------------------------------\n\nprogram\n .command(\"vis <type>\")\n .description(\"Visualise a type — instance count, attribute coverage, top relations\")\n .option(\"--kg <name>\", \"Knowledge graph to inspect\")\n .action(async (typeName: string, opts: { kg?: string }) => {\n await withErrors(async () => {\n const c = client();\n\n // Resolve KG: use --kg flag, or pick first available KG.\n let kg = opts.kg;\n if (!kg) {\n const kgs = await c.listKgs();\n if (!kgs.length) {\n fail(\"No knowledge graphs found. Run 'cograph ingest' first.\");\n }\n kg = String(kgs[0].name ?? \"\");\n }\n\n let summary: import(\"./client.js\").TypeSummary;\n try {\n summary = await c.typeSummary(kg, typeName);\n } catch {\n fail(`Type '${typeName}' not found in KG '${kg}'.`);\n }\n\n const { entity_count, attributes, relationships, description, parent_type } = summary;\n const header = `${typeName}${parent_type ? ` (subClassOf ${parent_type})` : \"\"} — ${entity_count.toLocaleString()} instances`;\n process.stdout.write(`\\n${header}\\n${\"─\".repeat(header.length)}\\n`);\n if (description) process.stdout.write(`${description}\\n`);\n\n // Attributes table\n if (attributes.length) {\n process.stdout.write(`\\nAttributes (${attributes.length}):\\n`);\n const sorted = [...attributes].sort((a, b) => b.coverage_pct - a.coverage_pct);\n for (const a of sorted.slice(0, 10)) {\n const bar = \"█\".repeat(Math.round(a.coverage_pct / 10));\n const pct = `${a.coverage_pct}%`.padStart(6);\n process.stdout.write(` ${a.name.padEnd(24)} ${pct} ${bar}\\n`);\n }\n if (attributes.length > 10) {\n process.stdout.write(` … and ${attributes.length - 10} more\\n`);\n }\n }\n\n // Relations table\n if (relationships.length) {\n process.stdout.write(`\\nRelationships (${relationships.length}):\\n`);\n for (const r of relationships.slice(0, 8)) {\n const target = r.target_type ? ` → ${r.target_type}` : \"\";\n const pct = `${r.coverage_pct}%`.padStart(6);\n const avg = r.avg_degree ? ` (avg ${r.avg_degree})` : \"\";\n process.stdout.write(` ${(r.name + target).padEnd(36)} ${pct}${avg}\\n`);\n }\n }\n\n const explorerUrl = `https://cograph.cloud/dashboard/explore/${encodeURIComponent(typeName)}?kg=${encodeURIComponent(kg)}`;\n process.stdout.write(`\\n→ Open visually at ${explorerUrl}\\n`);\n process.stdout.write(\" (Sign in for interactive viz, search, and click-to-enrich.)\\n\\n\");\n });\n });\n\n// ---------------------------------------------------------------------------\n// clear\n// ---------------------------------------------------------------------------\n\nprogram\n .command(\"clear\")\n .description(\"Clear data\")\n .option(\"--kg <name>\", \"Clear a specific knowledge graph\")\n .option(\n \"--include-ontology\",\n \"Also clear the ontology (only meaningful when --kg is omitted)\",\n false,\n )\n .option(\"-y, --yes\", \"Skip confirmation\", false)\n .action(\n async (opts: { kg?: string; includeOntology?: boolean; yes?: boolean }) => {\n await withErrors(async () => {\n let msg: string;\n if (opts.kg) {\n msg = `Clear KG '${opts.kg}'?`;\n } else if (opts.includeOntology) {\n msg = \"Clear EVERYTHING including ontology?\";\n } else {\n msg = \"Clear all instance data (ontology preserved)?\";\n }\n\n if (!opts.yes) {\n const ok = await confirm(msg);\n if (!ok) {\n process.stdout.write(\"Cancelled.\\n\");\n return;\n }\n }\n\n const c = client();\n if (opts.kg) {\n await c.deleteKg(opts.kg);\n process.stdout.write(`Cleared KG: ${opts.kg}\\n`);\n return;\n }\n\n // Bulk-clear via /query + DELETE /triples — same loop the Python CLI uses.\n const tenant = c.tenant;\n const baseUrl = `${c.baseUrl}/graphs/${tenant}`;\n const headers: Record<string, string> = {\n \"Content-Type\": \"application/json\",\n };\n if (c.apiKey) headers[\"X-API-Key\"] = c.apiKey;\n\n const filters = opts.includeOntology\n ? \"\"\n : `FILTER(CONTAINS(STR(?s), '/entities/') || CONTAINS(STR(?s), '/onto/') || CONTAINS(STR(?s), '/kgs/'))`;\n const query = `SELECT ?s ?p ?o FROM <https://cograph.tech/graphs/${tenant}> WHERE { ?s ?p ?o . ${filters} } LIMIT 1000`;\n\n process.stdout.write(\"Clearing...\\n\");\n let deleted = 0;\n for (let i = 0; i < 50; i++) {\n const fetchRes = await fetch(`${baseUrl}/query`, {\n method: \"POST\",\n headers,\n body: JSON.stringify({ query }),\n });\n if (!fetchRes.ok) break;\n const data = (await fetchRes.json()) as {\n bindings?: Array<Record<string, unknown>>;\n };\n const bindings = data.bindings ?? [];\n if (!bindings.length) break;\n const triples = bindings\n .filter((b) => b.s)\n .map((b) => ({\n subject: b.s,\n predicate: b.p,\n object: b.o,\n }));\n for (let j = 0; j < triples.length; j += 100) {\n await fetch(`${baseUrl}/triples`, {\n method: \"DELETE\",\n headers,\n body: JSON.stringify({ triples: triples.slice(j, j + 100) }),\n });\n }\n deleted += triples.length;\n }\n process.stdout.write(`Deleted ${deleted} triples\\n`);\n });\n },\n );\n\n// ---------------------------------------------------------------------------\n// login\n// ---------------------------------------------------------------------------\n\nprogram\n .command(\"login\")\n .description(\"Sign in via your browser and save an API key\")\n .action(async () => {\n const { runLogin } = await import(\"./login.js\");\n await runLogin();\n });\n\n// ---------------------------------------------------------------------------\n// shell\n// ---------------------------------------------------------------------------\n\nprogram\n .command(\"shell\")\n .description(\"Start an interactive REPL\")\n .option(\"--kg <name>\", \"Knowledge graph to use\")\n .option(\"--local\", \"Use http://localhost:8000 and skip login (self-hosted)\")\n .option(\"--no-login\", \"Skip browser login (assume open-access backend)\")\n .action(\n async (opts: { kg?: string; local?: boolean; login?: boolean }) => {\n // Parent program also accepts --local/--no-login (so `cograph --local`\n // works without a subcommand). When commander parses\n // `cograph shell --local`, the parent sees --local first and the\n // subcommand never gets it — so merge from program.opts() too.\n const parentOpts = program.opts() as {\n local?: boolean;\n login?: boolean;\n };\n const { runShell } = await import(\"./shell.js\");\n await runShell({\n kg: opts.kg,\n local: opts.local || parentOpts.local,\n noLogin: opts.login === false || parentOpts.login === false,\n });\n },\n );\n\n// ---------------------------------------------------------------------------\n\n/** True when this module is the process entry point (run as `cograph …`), not\n * when it's imported (e.g. by the unit tests that exercise `runAgentCommand`).\n * Guards the auto-parse so importing the module has no side effects.\n *\n * npm installs the `bin` as a SYMLINK (node_modules/.bin/cograph →\n * dist/cli.js). Node sets import.meta.url to the *realpath* of the entry file\n * while process.argv[1] keeps the *symlink* path, so a naive href comparison\n * never matches and the CLI silently does nothing. Resolve the symlink first:\n * compare fileURLToPath(import.meta.url) against realpathSync(process.argv[1]).\n */\nfunction isMainModule(): boolean {\n const argv1 = process.argv[1];\n if (!argv1) return false;\n try {\n return fileURLToPath(import.meta.url) === realpathSync(argv1);\n } catch {\n return false;\n }\n}\n\nif (isMainModule()) {\n program.parseAsync(process.argv).catch((err) => {\n fail(`Error: ${err instanceof Error ? err.message : String(err)}`);\n });\n}\n\n// silence unused import warning if ever needed\nvoid 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package/dist/index.d.ts CHANGED
@@ -162,6 +162,17 @@ declare class Client {
162
162
  enrichRun(req: EnrichRequest): Promise<EnrichJobCreate>;
163
163
  /** List recent enrichment jobs for the current tenant. */
164
164
  enrichJobs(): Promise<JobSummary[]>;
165
+ /**
166
+ * List ALL of a tenant's tracked jobs — dedupe, enrichment AND reconciliation
167
+ * — newest first (`GET /graphs/{tenant}/jobs`, COG-101). This is the unified
168
+ * feed the Jobs page renders; contrast {@link enrichJobs}, which lists only
169
+ * enrichment jobs (`/enrich/jobs`). Pass `category` to filter to one kind.
170
+ * Each item carries the unified summary fields (category, trigger, last_run,
171
+ * next_run, cost(+note), status, progress_pct).
172
+ */
173
+ jobs(opts?: {
174
+ category?: JobCategory;
175
+ }): Promise<JobSummary[]>;
165
176
  /** Fetch a single enrichment job (with truncated results). */
166
177
  enrichJob(jobId: string): Promise<EnrichJob>;
167
178
  /** Fetch the conflict review queue for a job. */
@@ -297,6 +308,12 @@ interface TypeSummary {
297
308
  }
298
309
  type EnrichmentTier = "lite" | "base" | "core" | "pro";
299
310
  type JobStatus = "queued" | "running" | "review" | "applied" | "cancelled" | "failed";
311
+ /** The kind of work a tracked job performs — the unified `/jobs` feed spans all
312
+ * three. Existing enrichment jobs default to `enrichment` server-side. */
313
+ type JobCategory = "dedupe" | "enrichment" | "reconciliation";
314
+ /** How a job was kicked off. Today everything is `manual` (a user clicked an
315
+ * action); `scheduled`/`webhook` are reserved for future automation. */
316
+ type JobTrigger = "manual" | "scheduled" | "webhook";
300
317
  type ConflictPolicy = "skip" | "verify" | "overwrite" | "stage";
301
318
  type RowAction = "filled" | "verified" | "conflict" | "skipped" | "no_match";
302
319
  type ReviewDecision = "accept" | "reject" | "skip";
@@ -353,6 +370,14 @@ interface JobSummary {
353
370
  conflict_policy: ConflictPolicy;
354
371
  confidence_min: number;
355
372
  error?: string | null;
373
+ category?: JobCategory;
374
+ trigger?: JobTrigger;
375
+ last_run?: string | null;
376
+ next_run?: string | null;
377
+ cost?: number | null;
378
+ cost_note?: string | null;
379
+ /** Derived 0-100 completion percentage from progress.processed/total. */
380
+ progress_pct?: number;
356
381
  }
357
382
  interface EnrichJob extends JobSummary {
358
383
  results?: RowResult[];
@@ -482,6 +507,11 @@ declare class RawApi {
482
507
  enrichCreateJob(body: unknown, init?: RawInit): Promise<Response>;
483
508
  /** `GET /graphs/{tenant}/enrich/jobs` — list recent enrichment jobs. */
484
509
  enrichJobs(init?: RawInit): Promise<Response>;
510
+ /** `GET /graphs/{tenant}/jobs?category` — unified jobs list across ALL
511
+ * categories (dedupe + enrichment + reconciliation), newest first. */
512
+ jobs(opts?: {
513
+ category?: string;
514
+ }, init?: RawInit): Promise<Response>;
485
515
  /** `GET /graphs/{tenant}/enrich/jobs/{id}` — fetch a single job. */
486
516
  enrichJob(jobId: string, init?: RawInit): Promise<Response>;
487
517
  /** `GET /graphs/{tenant}/enrich/jobs/{id}/conflicts` — conflict review queue. */
package/dist/index.js CHANGED
@@ -205,6 +205,11 @@ var Client = class {
205
205
  pOntologyApply() {
206
206
  return `${this.base()}/ontology/apply`;
207
207
  }
208
+ /** @internal Unified jobs list (dedupe + enrichment + reconciliation),
209
+ * newest first. Optional `?category=` filter is baked into `query`. */
210
+ pJobs(query) {
211
+ return `${this.base()}/jobs${query ?? ""}`;
212
+ }
208
213
  /** @internal */
209
214
  pKgs() {
210
215
  return `${this.base()}/kgs`;
@@ -662,6 +667,24 @@ var Client = class {
662
667
  );
663
668
  return Array.isArray(data) ? data : [];
664
669
  }
670
+ /**
671
+ * List ALL of a tenant's tracked jobs — dedupe, enrichment AND reconciliation
672
+ * — newest first (`GET /graphs/{tenant}/jobs`, COG-101). This is the unified
673
+ * feed the Jobs page renders; contrast {@link enrichJobs}, which lists only
674
+ * enrichment jobs (`/enrich/jobs`). Pass `category` to filter to one kind.
675
+ * Each item carries the unified summary fields (category, trigger, last_run,
676
+ * next_run, cost(+note), status, progress_pct).
677
+ */
678
+ async jobs(opts = {}) {
679
+ const qs = opts.category ? `?category=${encodeURIComponent(opts.category)}` : "";
680
+ const data = await this.request(
681
+ "GET",
682
+ this.pJobs(qs),
683
+ void 0,
684
+ 15e3
685
+ );
686
+ return Array.isArray(data) ? data : [];
687
+ }
665
688
  /** Fetch a single enrichment job (with truncated results). */
666
689
  async enrichJob(jobId) {
667
690
  return this.request(
@@ -873,6 +896,12 @@ var RawApi = class {
873
896
  enrichJobs(init) {
874
897
  return this.client.requestRaw("GET", this.client.pEnrichJobs(), init);
875
898
  }
899
+ /** `GET /graphs/{tenant}/jobs?category` — unified jobs list across ALL
900
+ * categories (dedupe + enrichment + reconciliation), newest first. */
901
+ jobs(opts = {}, init) {
902
+ const qs = opts.category ? `?category=${encodeURIComponent(opts.category)}` : "";
903
+ return this.client.requestRaw("GET", this.client.pJobs(qs), init);
904
+ }
876
905
  /** `GET /graphs/{tenant}/enrich/jobs/{id}` — fetch a single job. */
877
906
  enrichJob(jobId, init) {
878
907
  return this.client.requestRaw("GET", this.client.pEnrichJob(jobId), init);