cograph 0.1.21 → 0.1.22

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Files changed (3) hide show
  1. package/dist/cli.js +50 -0
  2. package/dist/cli.js.map +1 -1
  3. package/package.json +1 -1
package/dist/cli.js CHANGED
@@ -251,6 +251,56 @@ er.command("rebuild").description(
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  );
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  });
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  });
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+ program.command("enrich").description("Agentic enrichment \u2014 fill an attribute from web sources, with citations").requiredOption("--kg <name>", "Knowledge graph").requiredOption("--type <Type>", "Entity type to enrich").requiredOption("--attribute <attr>", "Attribute to fill (e.g. reviews, description)").option("--tier <tier>", "lite | base | core | pro (paid adapters live in core/pro)", "core").option("--limit <n>", "Max entities to enrich", "3").option("--apply", "Write results to the graph (with provenance), not just stage").action(
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+ async (opts) => {
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+ await withErrors(async () => {
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+ const c = client();
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+ process.stdout.write(
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+ `Enriching ${opts.type}.${opts.attribute} in ${opts.kg} (tier ${opts.tier})\u2026
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+ `
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+ );
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+ const created = await c.enrichRun({
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+ kg_name: opts.kg,
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+ type_name: opts.type,
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+ attributes: [opts.attribute],
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+ tier: opts.tier,
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+ limit: Number(opts.limit),
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+ conflict_policy: opts.apply ? "overwrite" : "stage",
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+ confidence_min: 0.1
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+ });
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+ const terminal = ["applied", "review", "failed", "cancelled"];
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+ let job = await c.enrichJob(created.job_id);
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+ for (let i = 0; i < 40 && !terminal.includes(job.status); i++) {
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+ await new Promise((r) => setTimeout(r, 2e3));
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+ job = await c.enrichJob(created.job_id);
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+ }
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+ const filled = (job.results ?? []).filter((r) => r.verdict);
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+ if (!filled.length) {
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+ process.stdout.write("No enrichment results (no source returned a value).\n");
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+ return;
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+ }
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+ for (const r of filled) {
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+ const v = r.verdict;
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+ process.stdout.write(`
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+ ${r.entity_uri.split("/").pop()}
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+ `);
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+ process.stdout.write(` ${r.attribute}: ${v.value}
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+ `);
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+ process.stdout.write(
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+ ` source: ${v.source}${v.source_url ? " " + v.source_url : ""}
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+ `
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+ );
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+ if (v.reasoning) process.stdout.write(` ${v.reasoning}
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+ `);
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+ }
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+ process.stdout.write(
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+ `
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+ ${opts.apply ? "Applied to the graph (value + provenance triples)." : "Staged for review \u2014 re-run with --apply to write."}
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+ `
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+ );
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+ });
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+ }
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+ );
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  program.command("vis <type>").description("Visualise a type \u2014 instance count, attribute coverage, top relations").option("--kg <name>", "Knowledge graph to inspect").action(async (typeName, opts) => {
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  await withErrors(async () => {
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  const c = client();
package/dist/cli.js.map CHANGED
@@ -1 +1 @@
1
- {"version":3,"sources":["../src/cli.ts"],"sourcesContent":["import { createInterface } from \"node:readline\";\nimport { readFileSync } from \"node:fs\";\nimport { dirname, join } from \"node:path\";\nimport { fileURLToPath } from \"node:url\";\nimport { Command } from \"commander\";\nimport { Client, CographError } from \"./client.js\";\n\n// Read version from package.json at runtime so we never drift again.\n// dist/cli.js sits next to package.json once published; in dev (`npm link`)\n// dist/cli.js sits inside packages/cograph/dist/, so the parent dir is the\n// package root either way.\nfunction pkgVersion(): string {\n try {\n const here = dirname(fileURLToPath(import.meta.url));\n const pkg = JSON.parse(readFileSync(join(here, \"..\", \"package.json\"), \"utf-8\"));\n return typeof pkg.version === \"string\" ? pkg.version : \"0.0.0\";\n } catch {\n return \"0.0.0\";\n }\n}\n\nfunction client(): Client {\n return new Client();\n}\n\nfunction printJson(data: unknown): void {\n process.stdout.write(JSON.stringify(data, null, 2) + \"\\n\");\n}\n\nfunction fail(msg: string, code = 1): never {\n process.stderr.write(msg.endsWith(\"\\n\") ? msg : msg + \"\\n\");\n process.exit(code);\n}\n\nasync function withErrors<T>(fn: () => Promise<T>): Promise<T | void> {\n try {\n return await fn();\n } catch (err) {\n if (err instanceof CographError) {\n fail(`Error: ${err.message}`);\n }\n fail(`Error: ${err instanceof Error ? err.message : String(err)}`);\n }\n}\n\nasync function confirm(prompt: string): Promise<boolean> {\n const rl = createInterface({ input: process.stdin, output: process.stdout });\n return new Promise((resolve) => {\n rl.question(`${prompt} [y/N] `, (ans) => {\n rl.close();\n resolve(ans.trim().toLowerCase() === \"y\");\n });\n });\n}\n\nconst program = new Command();\nprogram\n .name(\"cograph\")\n .description(\"Cograph Knowledge Graph CLI\")\n .version(pkgVersion())\n // Default action when no subcommand is given: drop into the interactive\n // shell. So `cograph` (or `npx cograph`) Just Works for the common case;\n // subcommands like `cograph ingest <file>` still route to their own\n // actions because commander dispatches subcommands first.\n .option(\"--local\", \"Use http://localhost:8000 and skip login (self-hosted)\")\n .option(\"--no-login\", \"Skip browser login (assume open-access backend)\")\n .action(async (opts: { local?: boolean; login?: boolean }) => {\n const { runShell } = await import(\"./shell.js\");\n await runShell({\n local: opts.local,\n // commander's --no-login inverts: opts.login === false when flag passed.\n noLogin: opts.login === false,\n });\n });\n\n// ---------------------------------------------------------------------------\n// kg\n// ---------------------------------------------------------------------------\n\nconst kg = program.command(\"kg\").description(\"Manage knowledge graphs\");\n\nkg.command(\"list\")\n .description(\"List knowledge graphs\")\n .action(async () => {\n await withErrors(async () => {\n const kgs = await client().listKgs();\n if (!kgs.length) {\n process.stdout.write(\n \"No knowledge graphs. Create one with: cograph kg create <name>\\n\",\n );\n return;\n }\n for (const k of kgs) {\n const name = String(k.name ?? \"?\");\n const triples = Number(k.triple_count ?? 0);\n const desc = k.description ? ` — ${k.description}` : \"\";\n const padName = name.padEnd(20, \" \");\n const padTriples = String(triples).padStart(6, \" \");\n process.stdout.write(` ${padName} ${padTriples} triples${desc}\\n`);\n }\n });\n });\n\nkg.command(\"create <name>\")\n .description(\"Create a knowledge graph\")\n .option(\"-d, --description <text>\", \"Description\")\n .action(async (name: string, opts: { description?: string }) => {\n await withErrors(async () => {\n const created = await client().createKg(name, opts.description);\n process.stdout.write(`Created knowledge graph: ${created.name ?? name}\\n`);\n });\n });\n\nkg.command(\"delete <name>\")\n .description(\"Delete a knowledge graph\")\n .action(async (name: string) => {\n await withErrors(async () => {\n await client().deleteKg(name);\n process.stdout.write(`Deleted knowledge graph: ${name}\\n`);\n });\n });\n\n// ---------------------------------------------------------------------------\n// ingest\n// ---------------------------------------------------------------------------\n\nprogram\n .command(\"ingest [file]\")\n .description(\"Ingest data from a file or --text\")\n .option(\"-t, --text <text>\", \"Inline text to ingest\")\n .option(\"--kg <name>\", \"Target knowledge graph name\")\n .option(\n \"-f, --format <fmt>\",\n \"Override format detection (text|csv|json)\",\n )\n .action(\n async (\n file: string | undefined,\n opts: { text?: string; kg?: string; format?: string },\n ) => {\n await withErrors(async () => {\n const c = client();\n if (opts.text) {\n process.stdout.write(\n `Ingesting text (${opts.text.length.toLocaleString()} chars)...\\n`,\n );\n const result = await c.ingest(opts.text, {\n kg: opts.kg,\n contentType: opts.format ?? \"text\",\n });\n printIngestResult(result);\n return;\n }\n if (!file) {\n fail(\"Provide a file or --text\");\n }\n // ingest() handles file reading + format detection + CSV two-step flow.\n process.stdout.write(`Ingesting ${file}...\\n`);\n const result = await c.ingest(file, {\n kg: opts.kg,\n contentType: opts.format,\n });\n printIngestResult(result);\n });\n },\n );\n\nfunction printIngestResult(result: Record<string, unknown>): void {\n const num = (k: string) => Number(result[k] ?? 0);\n process.stdout.write(` Entities extracted: ${num(\"entities_extracted\")}\\n`);\n process.stdout.write(` Entities resolved: ${num(\"entities_resolved\")}\\n`);\n process.stdout.write(` Triples inserted: ${num(\"triples_inserted\")}\\n`);\n const types = result.types_created;\n if (Array.isArray(types) && types.length) {\n process.stdout.write(` Types created: ${types.join(\", \")}\\n`);\n }\n const rejections = result.rejections;\n if (Array.isArray(rejections) && rejections.length) {\n process.stdout.write(` Rejections: ${rejections.length}\\n`);\n }\n}\n\n// ---------------------------------------------------------------------------\n// ask\n// ---------------------------------------------------------------------------\n\nprogram\n .command(\"ask <question>\")\n .description(\"Ask a natural language question\")\n .option(\"--kg <name>\", \"Knowledge graph to query\")\n .option(\"-d, --debug\", \"Show SPARQL and latency breakdown\")\n .option(\"-m, --model <model>\", \"Override query model\")\n .action(\n async (\n question: string,\n opts: { kg?: string; debug?: boolean; model?: string },\n ) => {\n await withErrors(async () => {\n if (opts.model) process.stdout.write(`Model: ${opts.model}\\n`);\n process.stdout.write(`Q: ${question}\\n`);\n process.stdout.write(\"Generating answer...\\n\");\n const t0 = Date.now();\n const result = await client().ask(question, {\n kg: opts.kg,\n model: opts.model,\n });\n const roundtripMs = Date.now() - t0;\n process.stdout.write(`\\nA: ${result.answer ?? \"No answer\"}\\n`);\n if (opts.debug) {\n process.stdout.write(`\\nSPARQL:\\n${result.sparql ?? \"\"}\\n`);\n const timing = (result.timing ?? {}) as Record<string, unknown>;\n if (Object.keys(timing).length) {\n process.stdout.write(`\\n${\"─\".repeat(40)}\\n`);\n process.stdout.write(\n `${\"Stage\".padEnd(25)} ${\"Time\".padStart(10)}\\n`,\n );\n process.stdout.write(`${\"─\".repeat(40)}\\n`);\n for (const [key, val] of Object.entries(timing)) {\n if (key === \"attempts\") {\n process.stdout.write(\n `${\"Attempts\".padEnd(25)} ${String(val).padStart(10)}\\n`,\n );\n } else if (typeof val === \"string\") {\n const label = key\n .replace(/_/g, \" \")\n .replace(/\\b\\w/g, (c) => c.toUpperCase());\n process.stdout.write(\n `${label.padEnd(25)} ${val.padStart(10)}\\n`,\n );\n } else {\n const label = key\n .replace(/_ms$/, \"\")\n .replace(/_/g, \" \")\n .replace(/\\b\\w/g, (c) => c.toUpperCase());\n const num = typeof val === \"number\" ? val : Number(val);\n process.stdout.write(\n `${label.padEnd(25)} ${num.toFixed(1).padStart(8)}ms\\n`,\n );\n }\n }\n process.stdout.write(`${\"─\".repeat(40)}\\n`);\n process.stdout.write(\n `${\"Client roundtrip\".padEnd(25)} ${roundtripMs.toFixed(1).padStart(8)}ms\\n`,\n );\n }\n }\n });\n },\n );\n\n// ---------------------------------------------------------------------------\n// ontology\n// ---------------------------------------------------------------------------\n\nconst onto = program.command(\"ontology\").description(\"View ontology\");\n\nonto\n .command(\"types\")\n .description(\"List ontology types\")\n .action(async () => {\n await withErrors(async () => {\n const types = await client().ontologyTypes();\n if (!types.length) {\n process.stdout.write(\"No ontology types defined.\\n\");\n return;\n }\n for (const t of types) {\n const parent = t.parent_type\n ? ` (subClassOf ${t.parent_type})`\n : \"\";\n const desc = t.description ? ` — ${t.description}` : \"\";\n process.stdout.write(` ${t.name}${parent}${desc}\\n`);\n const attrs = (t.attributes ?? []) as Array<Record<string, unknown>>;\n for (const a of attrs) {\n process.stdout.write(\n ` .${a.name} (${a.datatype ?? \"string\"})\\n`,\n );\n }\n }\n });\n });\n\n// ---------------------------------------------------------------------------\n// er — entity resolution\n// ---------------------------------------------------------------------------\n\nconst er = program.command(\"er\").description(\"Entity resolution\");\n\ner.command(\"rebuild\")\n .description(\n \"Second pass: collapse intra-batch entity fragments in an ingested KG\",\n )\n .requiredOption(\"--kg <name>\", \"Knowledge graph to rebuild\")\n .action(async (opts: { kg: string }) => {\n await withErrors(async () => {\n process.stdout.write(`Rebuilding entity resolution for ${opts.kg}…\\n`);\n const report = await client().erRebuild(opts.kg);\n const types = (report.types ?? []) as Array<Record<string, unknown>>;\n for (const t of types) {\n const name = String(t.type ?? \"?\").padEnd(16, \" \");\n process.stdout.write(\n ` ${name} ${t.entities_before} → ${t.entities_after}` +\n ` (−${t.fragments_absorbed} fragments across ${t.clusters_merged} clusters)\\n`,\n );\n }\n process.stdout.write(\n `Done. ${report.fragments_absorbed_total ?? 0} fragments absorbed.\\n`,\n );\n });\n });\n\n// ---------------------------------------------------------------------------\n// vis\n// ---------------------------------------------------------------------------\n\nprogram\n .command(\"vis <type>\")\n .description(\"Visualise a type — instance count, attribute coverage, top relations\")\n .option(\"--kg <name>\", \"Knowledge graph to inspect\")\n .action(async (typeName: string, opts: { kg?: string }) => {\n await withErrors(async () => {\n const c = client();\n\n // Resolve KG: use --kg flag, or pick first available KG.\n let kg = opts.kg;\n if (!kg) {\n const kgs = await c.listKgs();\n if (!kgs.length) {\n fail(\"No knowledge graphs found. Run 'cograph ingest' first.\");\n }\n kg = String(kgs[0].name ?? \"\");\n }\n\n let summary: import(\"./client.js\").TypeSummary;\n try {\n summary = await c.typeSummary(kg, typeName);\n } catch {\n fail(`Type '${typeName}' not found in KG '${kg}'.`);\n }\n\n const { entity_count, attributes, relationships, description, parent_type } = summary;\n const header = `${typeName}${parent_type ? ` (subClassOf ${parent_type})` : \"\"} — ${entity_count.toLocaleString()} instances`;\n process.stdout.write(`\\n${header}\\n${\"─\".repeat(header.length)}\\n`);\n if (description) process.stdout.write(`${description}\\n`);\n\n // Attributes table\n if (attributes.length) {\n process.stdout.write(`\\nAttributes (${attributes.length}):\\n`);\n const sorted = [...attributes].sort((a, b) => b.coverage_pct - a.coverage_pct);\n for (const a of sorted.slice(0, 10)) {\n const bar = \"█\".repeat(Math.round(a.coverage_pct / 10));\n const pct = `${a.coverage_pct}%`.padStart(6);\n process.stdout.write(` ${a.name.padEnd(24)} ${pct} ${bar}\\n`);\n }\n if (attributes.length > 10) {\n process.stdout.write(` … and ${attributes.length - 10} more\\n`);\n }\n }\n\n // Relations table\n if (relationships.length) {\n process.stdout.write(`\\nRelationships (${relationships.length}):\\n`);\n for (const r of relationships.slice(0, 8)) {\n const target = r.target_type ? ` → ${r.target_type}` : \"\";\n const pct = `${r.coverage_pct}%`.padStart(6);\n const avg = r.avg_degree ? ` (avg ${r.avg_degree})` : \"\";\n process.stdout.write(` ${(r.name + target).padEnd(36)} ${pct}${avg}\\n`);\n }\n }\n\n const explorerUrl = `https://cograph.cloud/dashboard/explore/${encodeURIComponent(typeName)}?kg=${encodeURIComponent(kg)}`;\n process.stdout.write(`\\n→ Open visually at ${explorerUrl}\\n`);\n process.stdout.write(\" (Sign in for interactive viz, search, and click-to-enrich.)\\n\\n\");\n });\n });\n\n// ---------------------------------------------------------------------------\n// clear\n// ---------------------------------------------------------------------------\n\nprogram\n .command(\"clear\")\n .description(\"Clear data\")\n .option(\"--kg <name>\", \"Clear a specific knowledge graph\")\n .option(\n \"--include-ontology\",\n \"Also clear the ontology (only meaningful when --kg is omitted)\",\n false,\n )\n .option(\"-y, --yes\", \"Skip confirmation\", false)\n .action(\n async (opts: { kg?: string; includeOntology?: boolean; yes?: boolean }) => {\n await withErrors(async () => {\n let msg: string;\n if (opts.kg) {\n msg = `Clear KG '${opts.kg}'?`;\n } else if (opts.includeOntology) {\n msg = \"Clear EVERYTHING including ontology?\";\n } else {\n msg = \"Clear all instance data (ontology preserved)?\";\n }\n\n if (!opts.yes) {\n const ok = await confirm(msg);\n if (!ok) {\n process.stdout.write(\"Cancelled.\\n\");\n return;\n }\n }\n\n const c = client();\n if (opts.kg) {\n await c.deleteKg(opts.kg);\n process.stdout.write(`Cleared KG: ${opts.kg}\\n`);\n return;\n }\n\n // Bulk-clear via /query + DELETE /triples — same loop the Python CLI uses.\n const tenant = c.tenant;\n const baseUrl = `${c.baseUrl}/graphs/${tenant}`;\n const headers: Record<string, string> = {\n \"Content-Type\": \"application/json\",\n };\n if (c.apiKey) headers[\"X-API-Key\"] = c.apiKey;\n\n const filters = opts.includeOntology\n ? \"\"\n : `FILTER(CONTAINS(STR(?s), '/entities/') || CONTAINS(STR(?s), '/onto/') || CONTAINS(STR(?s), '/kgs/'))`;\n const query = `SELECT ?s ?p ?o FROM <https://cograph.tech/graphs/${tenant}> WHERE { ?s ?p ?o . ${filters} } LIMIT 1000`;\n\n process.stdout.write(\"Clearing...\\n\");\n let deleted = 0;\n for (let i = 0; i < 50; i++) {\n const fetchRes = await fetch(`${baseUrl}/query`, {\n method: \"POST\",\n headers,\n body: JSON.stringify({ query }),\n });\n if (!fetchRes.ok) break;\n const data = (await fetchRes.json()) as {\n bindings?: Array<Record<string, unknown>>;\n };\n const bindings = data.bindings ?? [];\n if (!bindings.length) break;\n const triples = bindings\n .filter((b) => b.s)\n .map((b) => ({\n subject: b.s,\n predicate: b.p,\n object: b.o,\n }));\n for (let j = 0; j < triples.length; j += 100) {\n await fetch(`${baseUrl}/triples`, {\n method: \"DELETE\",\n headers,\n body: JSON.stringify({ triples: triples.slice(j, j + 100) }),\n });\n }\n deleted += triples.length;\n }\n process.stdout.write(`Deleted ${deleted} triples\\n`);\n });\n },\n );\n\n// ---------------------------------------------------------------------------\n// login\n// ---------------------------------------------------------------------------\n\nprogram\n .command(\"login\")\n .description(\"Sign in via your browser and save an API key\")\n .action(async () => {\n const { runLogin } = await import(\"./login.js\");\n await runLogin();\n });\n\n// ---------------------------------------------------------------------------\n// shell\n// ---------------------------------------------------------------------------\n\nprogram\n .command(\"shell\")\n .description(\"Start an interactive REPL\")\n .option(\"--kg <name>\", \"Knowledge graph to use\")\n .option(\"--local\", \"Use http://localhost:8000 and skip login (self-hosted)\")\n .option(\"--no-login\", \"Skip browser login (assume open-access backend)\")\n .action(\n async (opts: { kg?: string; local?: boolean; login?: boolean }) => {\n // Parent program also accepts --local/--no-login (so `cograph --local`\n // works without a subcommand). When commander parses\n // `cograph shell --local`, the parent sees --local first and the\n // subcommand never gets it — so merge from program.opts() too.\n const parentOpts = program.opts() as {\n local?: boolean;\n login?: boolean;\n };\n const { runShell } = await import(\"./shell.js\");\n await runShell({\n kg: opts.kg,\n local: opts.local || parentOpts.local,\n noLogin: opts.login === false || parentOpts.login === false,\n });\n },\n );\n\n// ---------------------------------------------------------------------------\n\nprogram.parseAsync(process.argv).catch((err) => {\n fail(`Error: ${err instanceof Error ? err.message : String(err)}`);\n});\n\n// silence unused import warning if ever needed\nvoid 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+ {"version":3,"sources":["../src/cli.ts"],"sourcesContent":["import { createInterface } from \"node:readline\";\nimport { readFileSync } from \"node:fs\";\nimport { dirname, join } from \"node:path\";\nimport { fileURLToPath } from \"node:url\";\nimport { Command } from \"commander\";\nimport { Client, CographError } from \"./client.js\";\n\n// Read version from package.json at runtime so we never drift again.\n// dist/cli.js sits next to package.json once published; in dev (`npm link`)\n// dist/cli.js sits inside packages/cograph/dist/, so the parent dir is the\n// package root either way.\nfunction pkgVersion(): string {\n try {\n const here = dirname(fileURLToPath(import.meta.url));\n const pkg = JSON.parse(readFileSync(join(here, \"..\", \"package.json\"), \"utf-8\"));\n return typeof pkg.version === \"string\" ? pkg.version : \"0.0.0\";\n } catch {\n return \"0.0.0\";\n }\n}\n\nfunction client(): Client {\n return new Client();\n}\n\nfunction printJson(data: unknown): void {\n process.stdout.write(JSON.stringify(data, null, 2) + \"\\n\");\n}\n\nfunction fail(msg: string, code = 1): never {\n process.stderr.write(msg.endsWith(\"\\n\") ? msg : msg + \"\\n\");\n process.exit(code);\n}\n\nasync function withErrors<T>(fn: () => Promise<T>): Promise<T | void> {\n try {\n return await fn();\n } catch (err) {\n if (err instanceof CographError) {\n fail(`Error: ${err.message}`);\n }\n fail(`Error: ${err instanceof Error ? err.message : String(err)}`);\n }\n}\n\nasync function confirm(prompt: string): Promise<boolean> {\n const rl = createInterface({ input: process.stdin, output: process.stdout });\n return new Promise((resolve) => {\n rl.question(`${prompt} [y/N] `, (ans) => {\n rl.close();\n resolve(ans.trim().toLowerCase() === \"y\");\n });\n });\n}\n\nconst program = new Command();\nprogram\n .name(\"cograph\")\n .description(\"Cograph Knowledge Graph CLI\")\n .version(pkgVersion())\n // Default action when no subcommand is given: drop into the interactive\n // shell. So `cograph` (or `npx cograph`) Just Works for the common case;\n // subcommands like `cograph ingest <file>` still route to their own\n // actions because commander dispatches subcommands first.\n .option(\"--local\", \"Use http://localhost:8000 and skip login (self-hosted)\")\n .option(\"--no-login\", \"Skip browser login (assume open-access backend)\")\n .action(async (opts: { local?: boolean; login?: boolean }) => {\n const { runShell } = await import(\"./shell.js\");\n await runShell({\n local: opts.local,\n // commander's --no-login inverts: opts.login === false when flag passed.\n noLogin: opts.login === false,\n });\n });\n\n// ---------------------------------------------------------------------------\n// kg\n// ---------------------------------------------------------------------------\n\nconst kg = program.command(\"kg\").description(\"Manage knowledge graphs\");\n\nkg.command(\"list\")\n .description(\"List knowledge graphs\")\n .action(async () => {\n await withErrors(async () => {\n const kgs = await client().listKgs();\n if (!kgs.length) {\n process.stdout.write(\n \"No knowledge graphs. Create one with: cograph kg create <name>\\n\",\n );\n return;\n }\n for (const k of kgs) {\n const name = String(k.name ?? \"?\");\n const triples = Number(k.triple_count ?? 0);\n const desc = k.description ? ` — ${k.description}` : \"\";\n const padName = name.padEnd(20, \" \");\n const padTriples = String(triples).padStart(6, \" \");\n process.stdout.write(` ${padName} ${padTriples} triples${desc}\\n`);\n }\n });\n });\n\nkg.command(\"create <name>\")\n .description(\"Create a knowledge graph\")\n .option(\"-d, --description <text>\", \"Description\")\n .action(async (name: string, opts: { description?: string }) => {\n await withErrors(async () => {\n const created = await client().createKg(name, opts.description);\n process.stdout.write(`Created knowledge graph: ${created.name ?? name}\\n`);\n });\n });\n\nkg.command(\"delete <name>\")\n .description(\"Delete a knowledge graph\")\n .action(async (name: string) => {\n await withErrors(async () => {\n await client().deleteKg(name);\n process.stdout.write(`Deleted knowledge graph: ${name}\\n`);\n });\n });\n\n// ---------------------------------------------------------------------------\n// ingest\n// ---------------------------------------------------------------------------\n\nprogram\n .command(\"ingest [file]\")\n .description(\"Ingest data from a file or --text\")\n .option(\"-t, --text <text>\", \"Inline text to ingest\")\n .option(\"--kg <name>\", \"Target knowledge graph name\")\n .option(\n \"-f, --format <fmt>\",\n \"Override format detection (text|csv|json)\",\n )\n .action(\n async (\n file: string | undefined,\n opts: { text?: string; kg?: string; format?: string },\n ) => {\n await withErrors(async () => {\n const c = client();\n if (opts.text) {\n process.stdout.write(\n `Ingesting text (${opts.text.length.toLocaleString()} chars)...\\n`,\n );\n const result = await c.ingest(opts.text, {\n kg: opts.kg,\n contentType: opts.format ?? \"text\",\n });\n printIngestResult(result);\n return;\n }\n if (!file) {\n fail(\"Provide a file or --text\");\n }\n // ingest() handles file reading + format detection + CSV two-step flow.\n process.stdout.write(`Ingesting ${file}...\\n`);\n const result = await c.ingest(file, {\n kg: opts.kg,\n contentType: opts.format,\n });\n printIngestResult(result);\n });\n },\n );\n\nfunction printIngestResult(result: Record<string, unknown>): void {\n const num = (k: string) => Number(result[k] ?? 0);\n process.stdout.write(` Entities extracted: ${num(\"entities_extracted\")}\\n`);\n process.stdout.write(` Entities resolved: ${num(\"entities_resolved\")}\\n`);\n process.stdout.write(` Triples inserted: ${num(\"triples_inserted\")}\\n`);\n const types = result.types_created;\n if (Array.isArray(types) && types.length) {\n process.stdout.write(` Types created: ${types.join(\", \")}\\n`);\n }\n const rejections = result.rejections;\n if (Array.isArray(rejections) && rejections.length) {\n process.stdout.write(` Rejections: ${rejections.length}\\n`);\n }\n}\n\n// ---------------------------------------------------------------------------\n// ask\n// ---------------------------------------------------------------------------\n\nprogram\n .command(\"ask <question>\")\n .description(\"Ask a natural language question\")\n .option(\"--kg <name>\", \"Knowledge graph to query\")\n .option(\"-d, --debug\", \"Show SPARQL and latency breakdown\")\n .option(\"-m, --model <model>\", \"Override query model\")\n .action(\n async (\n question: string,\n opts: { kg?: string; debug?: boolean; model?: string },\n ) => {\n await withErrors(async () => {\n if (opts.model) process.stdout.write(`Model: ${opts.model}\\n`);\n process.stdout.write(`Q: ${question}\\n`);\n process.stdout.write(\"Generating answer...\\n\");\n const t0 = Date.now();\n const result = await client().ask(question, {\n kg: opts.kg,\n model: opts.model,\n });\n const roundtripMs = Date.now() - t0;\n process.stdout.write(`\\nA: ${result.answer ?? \"No answer\"}\\n`);\n if (opts.debug) {\n process.stdout.write(`\\nSPARQL:\\n${result.sparql ?? \"\"}\\n`);\n const timing = (result.timing ?? {}) as Record<string, unknown>;\n if (Object.keys(timing).length) {\n process.stdout.write(`\\n${\"─\".repeat(40)}\\n`);\n process.stdout.write(\n `${\"Stage\".padEnd(25)} ${\"Time\".padStart(10)}\\n`,\n );\n process.stdout.write(`${\"─\".repeat(40)}\\n`);\n for (const [key, val] of Object.entries(timing)) {\n if (key === \"attempts\") {\n process.stdout.write(\n `${\"Attempts\".padEnd(25)} ${String(val).padStart(10)}\\n`,\n );\n } else if (typeof val === \"string\") {\n const label = key\n .replace(/_/g, \" \")\n .replace(/\\b\\w/g, (c) => c.toUpperCase());\n process.stdout.write(\n `${label.padEnd(25)} ${val.padStart(10)}\\n`,\n );\n } else {\n const label = key\n .replace(/_ms$/, \"\")\n .replace(/_/g, \" \")\n .replace(/\\b\\w/g, (c) => c.toUpperCase());\n const num = typeof val === \"number\" ? val : Number(val);\n process.stdout.write(\n `${label.padEnd(25)} ${num.toFixed(1).padStart(8)}ms\\n`,\n );\n }\n }\n process.stdout.write(`${\"─\".repeat(40)}\\n`);\n process.stdout.write(\n `${\"Client roundtrip\".padEnd(25)} ${roundtripMs.toFixed(1).padStart(8)}ms\\n`,\n );\n }\n }\n });\n },\n );\n\n// ---------------------------------------------------------------------------\n// ontology\n// ---------------------------------------------------------------------------\n\nconst onto = program.command(\"ontology\").description(\"View ontology\");\n\nonto\n .command(\"types\")\n .description(\"List ontology types\")\n .action(async () => {\n await withErrors(async () => {\n const types = await client().ontologyTypes();\n if (!types.length) {\n process.stdout.write(\"No ontology types defined.\\n\");\n return;\n }\n for (const t of types) {\n const parent = t.parent_type\n ? ` (subClassOf ${t.parent_type})`\n : \"\";\n const desc = t.description ? ` — ${t.description}` : \"\";\n process.stdout.write(` ${t.name}${parent}${desc}\\n`);\n const attrs = (t.attributes ?? []) as Array<Record<string, unknown>>;\n for (const a of attrs) {\n process.stdout.write(\n ` .${a.name} (${a.datatype ?? \"string\"})\\n`,\n );\n }\n }\n });\n });\n\n// ---------------------------------------------------------------------------\n// er — entity resolution\n// ---------------------------------------------------------------------------\n\nconst er = program.command(\"er\").description(\"Entity resolution\");\n\ner.command(\"rebuild\")\n .description(\n \"Second pass: collapse intra-batch entity fragments in an ingested KG\",\n )\n .requiredOption(\"--kg <name>\", \"Knowledge graph to rebuild\")\n .action(async (opts: { kg: string }) => {\n await withErrors(async () => {\n process.stdout.write(`Rebuilding entity resolution for ${opts.kg}…\\n`);\n const report = await client().erRebuild(opts.kg);\n const types = (report.types ?? []) as Array<Record<string, unknown>>;\n for (const t of types) {\n const name = String(t.type ?? \"?\").padEnd(16, \" \");\n process.stdout.write(\n ` ${name} ${t.entities_before} → ${t.entities_after}` +\n ` (−${t.fragments_absorbed} fragments across ${t.clusters_merged} clusters)\\n`,\n );\n }\n process.stdout.write(\n `Done. ${report.fragments_absorbed_total ?? 0} fragments absorbed.\\n`,\n );\n });\n });\n\n// ---------------------------------------------------------------------------\n// enrich\n// ---------------------------------------------------------------------------\n\nprogram\n .command(\"enrich\")\n .description(\"Agentic enrichment — fill an attribute from web sources, with citations\")\n .requiredOption(\"--kg <name>\", \"Knowledge graph\")\n .requiredOption(\"--type <Type>\", \"Entity type to enrich\")\n .requiredOption(\"--attribute <attr>\", \"Attribute to fill (e.g. reviews, description)\")\n .option(\"--tier <tier>\", \"lite | base | core | pro (paid adapters live in core/pro)\", \"core\")\n .option(\"--limit <n>\", \"Max entities to enrich\", \"3\")\n .option(\"--apply\", \"Write results to the graph (with provenance), not just stage\")\n .action(\n async (opts: {\n kg: string;\n type: string;\n attribute: string;\n tier: string;\n limit: string;\n apply?: boolean;\n }) => {\n await withErrors(async () => {\n const c = client();\n process.stdout.write(\n `Enriching ${opts.type}.${opts.attribute} in ${opts.kg} (tier ${opts.tier})…\\n`,\n );\n const created = await c.enrichRun({\n kg_name: opts.kg,\n type_name: opts.type,\n attributes: [opts.attribute],\n tier: opts.tier as \"lite\" | \"base\" | \"core\" | \"pro\",\n limit: Number(opts.limit),\n conflict_policy: opts.apply ? \"overwrite\" : \"stage\",\n confidence_min: 0.1,\n });\n const terminal = [\"applied\", \"review\", \"failed\", \"cancelled\"];\n let job = await c.enrichJob(created.job_id);\n for (let i = 0; i < 40 && !terminal.includes(job.status); i++) {\n await new Promise((r) => setTimeout(r, 2000));\n job = await c.enrichJob(created.job_id);\n }\n const filled = (job.results ?? []).filter((r) => r.verdict);\n if (!filled.length) {\n process.stdout.write(\"No enrichment results (no source returned a value).\\n\");\n return;\n }\n for (const r of filled) {\n const v = r.verdict!;\n process.stdout.write(`\\n ${r.entity_uri.split(\"/\").pop()}\\n`);\n process.stdout.write(` ${r.attribute}: ${v.value}\\n`);\n process.stdout.write(\n ` source: ${v.source}${v.source_url ? \" \" + v.source_url : \"\"}\\n`,\n );\n if (v.reasoning) process.stdout.write(` ${v.reasoning}\\n`);\n }\n process.stdout.write(\n `\\n${opts.apply ? \"Applied to the graph (value + provenance triples).\" : \"Staged for review — re-run with --apply to write.\"}\\n`,\n );\n });\n },\n );\n\n// ---------------------------------------------------------------------------\n// vis\n// ---------------------------------------------------------------------------\n\nprogram\n .command(\"vis <type>\")\n .description(\"Visualise a type — instance count, attribute coverage, top relations\")\n .option(\"--kg <name>\", \"Knowledge graph to inspect\")\n .action(async (typeName: string, opts: { kg?: string }) => {\n await withErrors(async () => {\n const c = client();\n\n // Resolve KG: use --kg flag, or pick first available KG.\n let kg = opts.kg;\n if (!kg) {\n const kgs = await c.listKgs();\n if (!kgs.length) {\n fail(\"No knowledge graphs found. Run 'cograph ingest' first.\");\n }\n kg = String(kgs[0].name ?? \"\");\n }\n\n let summary: import(\"./client.js\").TypeSummary;\n try {\n summary = await c.typeSummary(kg, typeName);\n } catch {\n fail(`Type '${typeName}' not found in KG '${kg}'.`);\n }\n\n const { entity_count, attributes, relationships, description, parent_type } = summary;\n const header = `${typeName}${parent_type ? ` (subClassOf ${parent_type})` : \"\"} — ${entity_count.toLocaleString()} instances`;\n process.stdout.write(`\\n${header}\\n${\"─\".repeat(header.length)}\\n`);\n if (description) process.stdout.write(`${description}\\n`);\n\n // Attributes table\n if (attributes.length) {\n process.stdout.write(`\\nAttributes (${attributes.length}):\\n`);\n const sorted = [...attributes].sort((a, b) => b.coverage_pct - a.coverage_pct);\n for (const a of sorted.slice(0, 10)) {\n const bar = \"█\".repeat(Math.round(a.coverage_pct / 10));\n const pct = `${a.coverage_pct}%`.padStart(6);\n process.stdout.write(` ${a.name.padEnd(24)} ${pct} ${bar}\\n`);\n }\n if (attributes.length > 10) {\n process.stdout.write(` … and ${attributes.length - 10} more\\n`);\n }\n }\n\n // Relations table\n if (relationships.length) {\n process.stdout.write(`\\nRelationships (${relationships.length}):\\n`);\n for (const r of relationships.slice(0, 8)) {\n const target = r.target_type ? ` → ${r.target_type}` : \"\";\n const pct = `${r.coverage_pct}%`.padStart(6);\n const avg = r.avg_degree ? ` (avg ${r.avg_degree})` : \"\";\n process.stdout.write(` ${(r.name + target).padEnd(36)} ${pct}${avg}\\n`);\n }\n }\n\n const explorerUrl = `https://cograph.cloud/dashboard/explore/${encodeURIComponent(typeName)}?kg=${encodeURIComponent(kg)}`;\n process.stdout.write(`\\n→ Open visually at ${explorerUrl}\\n`);\n process.stdout.write(\" (Sign in for interactive viz, search, and click-to-enrich.)\\n\\n\");\n });\n });\n\n// ---------------------------------------------------------------------------\n// clear\n// ---------------------------------------------------------------------------\n\nprogram\n .command(\"clear\")\n .description(\"Clear data\")\n .option(\"--kg <name>\", \"Clear a specific knowledge graph\")\n .option(\n \"--include-ontology\",\n \"Also clear the ontology (only meaningful when --kg is omitted)\",\n false,\n )\n .option(\"-y, --yes\", \"Skip confirmation\", false)\n .action(\n async (opts: { kg?: string; includeOntology?: boolean; yes?: boolean }) => {\n await withErrors(async () => {\n let msg: string;\n if (opts.kg) {\n msg = `Clear KG '${opts.kg}'?`;\n } else if (opts.includeOntology) {\n msg = \"Clear EVERYTHING including ontology?\";\n } else {\n msg = \"Clear all instance data (ontology preserved)?\";\n }\n\n if (!opts.yes) {\n const ok = await confirm(msg);\n if (!ok) {\n process.stdout.write(\"Cancelled.\\n\");\n return;\n }\n }\n\n const c = client();\n if (opts.kg) {\n await c.deleteKg(opts.kg);\n process.stdout.write(`Cleared KG: ${opts.kg}\\n`);\n return;\n }\n\n // Bulk-clear via /query + DELETE /triples — same loop the Python CLI uses.\n const tenant = c.tenant;\n const baseUrl = `${c.baseUrl}/graphs/${tenant}`;\n const headers: Record<string, string> = {\n \"Content-Type\": \"application/json\",\n };\n if (c.apiKey) headers[\"X-API-Key\"] = c.apiKey;\n\n const filters = opts.includeOntology\n ? \"\"\n : `FILTER(CONTAINS(STR(?s), '/entities/') || CONTAINS(STR(?s), '/onto/') || CONTAINS(STR(?s), '/kgs/'))`;\n const query = `SELECT ?s ?p ?o FROM <https://cograph.tech/graphs/${tenant}> WHERE { ?s ?p ?o . ${filters} } LIMIT 1000`;\n\n process.stdout.write(\"Clearing...\\n\");\n let deleted = 0;\n for (let i = 0; i < 50; i++) {\n const fetchRes = await fetch(`${baseUrl}/query`, {\n method: \"POST\",\n headers,\n body: JSON.stringify({ query }),\n });\n if (!fetchRes.ok) break;\n const data = (await fetchRes.json()) as {\n bindings?: Array<Record<string, unknown>>;\n };\n const bindings = data.bindings ?? [];\n if (!bindings.length) break;\n const triples = bindings\n .filter((b) => b.s)\n .map((b) => ({\n subject: b.s,\n predicate: b.p,\n object: b.o,\n }));\n for (let j = 0; j < triples.length; j += 100) {\n await fetch(`${baseUrl}/triples`, {\n method: \"DELETE\",\n headers,\n body: JSON.stringify({ triples: triples.slice(j, j + 100) }),\n });\n }\n deleted += triples.length;\n }\n process.stdout.write(`Deleted ${deleted} triples\\n`);\n });\n },\n );\n\n// ---------------------------------------------------------------------------\n// login\n// ---------------------------------------------------------------------------\n\nprogram\n .command(\"login\")\n .description(\"Sign in via your browser and save an API key\")\n .action(async () => {\n const { runLogin } = await import(\"./login.js\");\n await runLogin();\n });\n\n// ---------------------------------------------------------------------------\n// shell\n// ---------------------------------------------------------------------------\n\nprogram\n .command(\"shell\")\n .description(\"Start an interactive REPL\")\n .option(\"--kg <name>\", \"Knowledge graph to use\")\n .option(\"--local\", \"Use http://localhost:8000 and skip login (self-hosted)\")\n .option(\"--no-login\", \"Skip browser login (assume open-access backend)\")\n .action(\n async (opts: { kg?: string; local?: boolean; login?: boolean }) => {\n // Parent program also accepts --local/--no-login (so `cograph --local`\n // works without a subcommand). When commander parses\n // `cograph shell --local`, the parent sees --local first and the\n // subcommand never gets it — so merge from program.opts() too.\n const parentOpts = program.opts() as {\n local?: boolean;\n login?: boolean;\n };\n const { runShell } = await import(\"./shell.js\");\n await runShell({\n kg: opts.kg,\n local: opts.local || parentOpts.local,\n noLogin: opts.login === false || parentOpts.login === false,\n });\n },\n );\n\n// ---------------------------------------------------------------------------\n\nprogram.parseAsync(process.argv).catch((err) => {\n fail(`Error: ${err instanceof Error ? err.message : String(err)}`);\n});\n\n// silence unused import warning if ever needed\nvoid 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package/package.json CHANGED
@@ -1,6 +1,6 @@
1
1
  {
2
2
  "name": "cograph",
3
- "version": "0.1.21",
3
+ "version": "0.1.22",
4
4
  "description": "Cograph SDK and CLI — knowledge graph platform for structured data",
5
5
  "type": "module",
6
6
  "main": "./dist/index.js",