codesift-mcp 0.3.0 → 0.5.0

package/dist/utils/import-graph.js

@@ -3,6 +3,11 @@
  */
 import { readFile } from "node:fs/promises";
 import { join } from "node:path";
+import { getParser } from "../parser/parser-manager.js";
+import { getCachedParse, setCachedParse } from "../parser/parse-cache.js";
+import { extractPythonImports } from "./python-imports.js";
+import { resolvePythonImport, detectSrcLayout } from "./python-import-resolver.js";
+import { resolvePhpNamespace } from "../tools/php-tools.js";
 // Patterns for detecting import statements across common languages
 const IMPORT_PATTERNS = [
     // ES modules: import ... from '...' or import ... from "..."
@@ -11,7 +16,27 @@ const IMPORT_PATTERNS = [
     /import\s*\(\s*['"]([^'"]+)['"]\s*\)/g,
     // CommonJS: require('...')
     /require\s*\(\s*['"]([^'"]+)['"]\s*\)/g,
+    // PHP: require/include with relative path string: require __DIR__ . '/helpers.php';
+    /(?:require|include)(?:_once)?\s*\(?\s*(?:__DIR__\s*\.\s*)?['"](\.\.?\/[^'"]+\.php)['"]/g,
 ];
+// Patterns for extracting PHP `use` statements (FQCN imports — PSR-4 based).
+// These are NOT file paths; they need PSR-4 resolution via composer.json.
+// Exposed separately so the resolver tool can opt-in.
+//
+// Accepts both UpperCase (PSR-1/2 modern) and lowercase (common in older
+// Yii2 apps: `use app\models\Survey`) namespaces. The FQCN must contain at
+// least one backslash to exclude global class imports like `use Closure;`
+// and `use Yii;` which would be noise for the import graph.
+//
+// Two separate patterns:
+//   SINGLE — `use App\Models\User;` or `use App\Models\User as U;`
+//   GROUP  — `use App\Models\{User, Post, Comment};` or with aliases
+const PHP_USE_SINGLE_PATTERN = /^\s*use\s+(\w+(?:\\\w+)+)(?:\s+as\s+\w+)?\s*;/gm;
+const PHP_USE_GROUP_PATTERN = /^\s*use\s+(\w+(?:\\\w+)*)\\\{([^}]+)\}\s*;/gm;
+// Patterns for extracting Kotlin `import` statements (fully-qualified names).
+// These are NOT file paths; they need heuristic resolution against source roots.
+// Matches: `import com.example.UserService`, `import com.example.*`, `import com.example.Foo as Bar`
+const KOTLIN_IMPORT_PATTERN = /^\s*import\s+([\w.]+(?:\.\*)?)(?:\s+as\s+\w+)?\s*$/gm;
 /**
  * Extract import paths from a source string.
  * Returns relative paths only (skips node_modules / bare specifiers).
@@ -50,34 +75,189 @@ export function resolveImportPath(importerFile, importPath) {
         }
     }
     let resolved = parts.join("/");
-    resolved = resolved.replace(/\.(ts|tsx|js|jsx|mjs|cjs)$/, "");
+    resolved = resolved.replace(/\.(astro|ts|tsx|js|jsx|mjs|cjs|php)$/, "");
     return resolved;
 }
+/**
+ * Extract PHP `use` statements (FQCN imports).
+ * Returns fully-qualified class/namespace names without the leading backslash.
+ * These are NOT file paths — they require PSR-4 resolution against composer.json.
+ *
+ * Handles both single-FQCN and grouped forms:
+ *   `use App\Models\User;`
+ *   `use App\Models\User as U;`
+ *   `use App\Models\{User, Post, Comment};`
+ *   `use App\{Models\User, Services\Auth as A};`
+ */
+export function extractPhpUseStatements(source) {
+    const uses = new Set();
+    // Single FQCN form
+    PHP_USE_SINGLE_PATTERN.lastIndex = 0;
+    let match;
+    while ((match = PHP_USE_SINGLE_PATTERN.exec(source)) !== null) {
+        const fqcn = match[1]?.replace(/^\\/, "");
+        if (fqcn)
+            uses.add(fqcn);
+    }
+    // Grouped form — split the brace content on commas, strip aliases,
+    // concatenate each fragment with the prefix.
+    PHP_USE_GROUP_PATTERN.lastIndex = 0;
+    while ((match = PHP_USE_GROUP_PATTERN.exec(source)) !== null) {
+        const prefix = match[1]?.replace(/^\\/, "");
+        const members = match[2];
+        if (!prefix || !members)
+            continue;
+        for (const raw of members.split(",")) {
+            // Strip `as Alias` and surrounding whitespace
+            const bare = raw.replace(/\s+as\s+\w+\s*$/, "").trim();
+            if (bare)
+                uses.add(`${prefix}\\${bare}`);
+        }
+    }
+    return [...uses];
+}
+/**
+ * Extract Kotlin `import` statements (fully-qualified names).
+ * Returns dot-separated package + class names. Wildcards (`com.example.*`) are
+ * preserved as-is. These are NOT file paths — they require heuristic resolution
+ * against the source root (usually `src/main/kotlin`, `src/commonMain/kotlin`, etc.).
+ */
+export function extractKotlinImports(source) {
+    const imports = new Set();
+    KOTLIN_IMPORT_PATTERN.lastIndex = 0;
+    let match;
+    while ((match = KOTLIN_IMPORT_PATTERN.exec(source)) !== null) {
+        const fqName = match[1];
+        if (fqName)
+            imports.add(fqName);
+    }
+    return [...imports];
+}
+/**
+ * Heuristically resolve a Kotlin fully-qualified import to an indexed file.
+ * Strategy: match the last segment of the FQN (the simple class name) against
+ * file basenames. For `com.example.service.UserService`, tries to find a file
+ * whose basename (without .kt/.kts) is `UserService` AND whose path contains
+ * the package path `com/example/service`.
+ *
+ * Returns the matched file path or null if no match.
+ *
+ * Limitations: single-repo heuristic. Doesn't handle wildcard imports
+ * (`com.example.*`) or multi-module setups with complex source roots.
+ */
+export function resolveKotlinImport(fqName, kotlinFilesByBasename) {
+    // Skip wildcard imports — can't resolve to a single file
+    if (fqName.endsWith(".*"))
+        return null;
+    // Skip standard library / third-party (no way to index jar files)
+    if (fqName.startsWith("kotlin.") || fqName.startsWith("java.") ||
+        fqName.startsWith("javax.") || fqName.startsWith("android.") ||
+        fqName.startsWith("androidx.") || fqName.startsWith("org.jetbrains.") ||
+        fqName.startsWith("org.junit.")) {
+        return null;
+    }
+    const parts = fqName.split(".");
+    if (parts.length < 2)
+        return null;
+    const simpleName = parts[parts.length - 1];
+    const packagePath = parts.slice(0, -1).join("/");
+    const candidates = kotlinFilesByBasename.get(simpleName);
+    if (!candidates)
+        return null;
+    // Prefer candidate whose path contains the package path
+    for (const candidate of candidates) {
+        if (candidate.includes(packagePath))
+            return candidate;
+    }
+    // Fallback: if only one candidate, return it (common in small projects)
+    if (candidates.length === 1)
+        return candidates[0] ?? null;
+    return null;
+}
+/**
+ * Build a lookup map from Kotlin file basenames (without extension) to file paths.
+ * Used by resolveKotlinImport for heuristic FQN resolution.
+ */
+export function buildKotlinFilesByBasename(index) {
+    const map = new Map();
+    for (const file of index.files) {
+        if (!/\.kts?$/.test(file.path))
+            continue;
+        const basename = file.path
+            .slice(file.path.lastIndexOf("/") + 1)
+            .replace(/\.kts?$/, "");
+        const existing = map.get(basename);
+        if (existing) {
+            existing.push(file.path);
+        }
+        else {
+            map.set(basename, [file.path]);
+        }
+    }
+    return map;
+}
 /**
  * Build normalized path map for matching imports to indexed files.
  */
 export function buildNormalizedPathMap(index) {
     const normalizedPaths = new Map();
     for (const file of index.files) {
-        const normalized = file.path.replace(/\.(ts|tsx|js|jsx|mjs|cjs)$/, "");
+        const normalized = file.path.replace(/\.(astro|ts|tsx|js|jsx|mjs|cjs|php|kt|kts|py)$/, "");
         normalizedPaths.set(normalized, file.path);
         if (normalized.endsWith("/index")) {
             normalizedPaths.set(normalized.slice(0, -6), file.path);
         }
+        // Python package index: map `foo/__init__` → `foo`
+        if (normalized.endsWith("/__init__")) {
+            normalizedPaths.set(normalized.slice(0, -9), file.path);
+        }
     }
     return normalizedPaths;
 }
 /**
  * Collect all import edges between files in the index.
  * Reads file source from disk to extract import statements.
+ * Handles JS/TS/PHP relative imports AND Kotlin fully-qualified imports
+ * (via heuristic basename + package-path matching).
  */
 export async function collectImportEdges(index, fileFilter) {
     const normalizedPaths = buildNormalizedPathMap(index);
+    const kotlinFilesByBasename = buildKotlinFilesByBasename(index);
     const edgeSet = new Set();
     const edges = [];
+    // Rollback kill switch — skip Python import extraction if env var set
+    const pythonDisabled = process.env.CODESIFT_DISABLE_PYTHON_IMPORTS === "1";
+    // Python needs the full indexed file set for package resolution — built once
+    const indexedPyFileSet = new Set(index.files.filter((f) => f.path.endsWith(".py")).map((f) => f.path));
+    const pySrcLayout = indexedPyFileSet.size > 0
+        ? detectSrcLayout([...indexedPyFileSet])
+        : null;
     const files = fileFilter
         ? index.files.filter((f) => fileFilter.has(f.path))
         : index.files;
+    const addEdge = (from, to, extras) => {
+        if (to === from)
+            return;
+        const edgeKey = `${from}->${to}`;
+        if (edgeSet.has(edgeKey)) {
+            // Upgrade: runtime import overrides a prior type_only edge
+            if (!extras?.type_only) {
+                const existing = edges.find((e) => e.from === from && e.to === to);
+                if (existing?.type_only)
+                    existing.type_only = false;
+            }
+            return;
+        }
+        edgeSet.add(edgeKey);
+        const edge = { from, to };
+        if (extras?.type_only)
+            edge.type_only = true;
+        if (extras?.star_import)
+            edge.star_import = true;
+        if (extras?.raw)
+            edge.raw = extras.raw;
+        edges.push(edge);
+    };
     for (const file of files) {
         let source;
         try {
@@ -86,17 +266,76 @@ export async function collectImportEdges(index, fileFilter) {
         catch {
             continue;
         }
+        // Relative-path imports (JS/TS/PHP)
         const importPaths = extractImports(source);
         for (const importPath of importPaths) {
             const resolved = resolveImportPath(file.path, importPath);
             const targetFile = normalizedPaths.get(resolved);
-            if (!targetFile || targetFile === file.path)
-                continue;
-            const edgeKey = `${file.path}->${targetFile}`;
-            if (edgeSet.has(edgeKey))
-                continue;
-            edgeSet.add(edgeKey);
-            edges.push({ from: file.path, to: targetFile });
+            if (targetFile)
+                addEdge(file.path, targetFile);
+        }
+        // Kotlin fully-qualified imports (.kt/.kts files only)
+        if (/\.kts?$/.test(file.path)) {
+            const kotlinImports = extractKotlinImports(source);
+            for (const fqName of kotlinImports) {
+                const targetFile = resolveKotlinImport(fqName, kotlinFilesByBasename);
+                if (targetFile)
+                    addEdge(file.path, targetFile);
+            }
+        }
+        // PHP cross-file edges via PSR-4 `use` statement resolution.
+        // Creates edges like: PostController.php → User.php when we see
+        // `use App\Models\User;` and composer.json maps `App\` to `src/`.
+        if (file.path.endsWith(".php")) {
+            const uses = extractPhpUseStatements(source);
+            for (const fqcn of uses) {
+                try {
+                    const resolved = await resolvePhpNamespace(index.repo, fqcn);
+                    if (resolved.exists && resolved.file_path) {
+                        const candidate = resolved.file_path.replace(/^\.\//, "");
+                        // Prefer the exact indexed path (handles prefixes like "./src/")
+                        const targetFile = index.files.some((f) => f.path === candidate)
+                            ? candidate
+                            : normalizedPaths.get(candidate.replace(/\.php$/, "")) ?? null;
+                        if (targetFile && targetFile !== file.path) {
+                            addEdge(file.path, targetFile);
+                        }
+                    }
+                }
+                catch {
+                    // Missing composer.json, malformed PSR-4, etc. — skip edge, don't crash.
+                }
+            }
+        }
+        // Python imports via tree-sitter AST + package-aware resolution.
+        // Uses parse cache to avoid re-parsing files already parsed by the
+        // symbol extractor pipeline — Python files are the only ones parsed
+        // twice per index (once for symbols, once for imports here).
+        if (!pythonDisabled && file.path.endsWith(".py")) {
+            try {
+                const parser = await getParser("python");
+                if (parser) {
+                    let tree = getCachedParse("python", source);
+                    if (!tree) {
+                        tree = parser.parse(source);
+                        setCachedParse("python", source, tree);
+                    }
+                    const pyImports = extractPythonImports(tree);
+                    for (const imp of pyImports) {
+                        const targetFile = resolvePythonImport({ module: imp.module, level: imp.level }, file.path, indexedPyFileSet, pySrcLayout);
+                        if (targetFile) {
+                            addEdge(file.path, targetFile, {
+                                type_only: imp.is_type_only,
+                                star_import: imp.is_star,
+                            });
+                        }
+                    }
+                }
+            }
+            catch (err) {
+                const message = err instanceof Error ? err.message : String(err);
+                console.warn(`[import-graph] python extraction failed for ${file.path}: ${message}`);
+            }
         }
     }
     return edges;

package/dist/utils/import-graph.js.map

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package/dist/utils/language-detect.d.ts

@@ -0,0 +1,21 @@
+export interface ProjectLanguages {
+    python: boolean;
+    php: boolean;
+    typescript: boolean;
+    javascript: boolean;
+    kotlin: boolean;
+    go: boolean;
+    rust: boolean;
+    ruby: boolean;
+}
+/**
+ * Scan a directory for source file extensions, returning which languages
+ * are present. Short-circuits once all tracked languages are found.
+ */
+export declare function detectProjectLanguages(root: string): Promise<ProjectLanguages>;
+/**
+ * Synchronous variant for use during server startup where top-level await
+ * isn't convenient. Uses readdirSync. Caps at MAX_FILES_SCANNED.
+ */
+export declare function detectProjectLanguagesSync(root: string): ProjectLanguages;
+//# sourceMappingURL=language-detect.d.ts.map

package/dist/utils/language-detect.d.ts.map

@@ -0,0 +1 @@
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package/dist/utils/language-detect.js

@@ -0,0 +1,183 @@
+/**
+ * Quick language detection for a project directory — runs BEFORE indexing.
+ *
+ * Used by registerTools() to gate language-specific tools behind language
+ * presence: PHP tools only surface if the project has .php files, Python
+ * tools only surface if the project has .py files, etc.
+ *
+ * Performance: fast file-tree walk with early-exit per language. Caps at
+ * ~2000 files to avoid slow startup on huge monorepos.
+ */
+import { readdir, stat } from "node:fs/promises";
+import { join } from "node:path";
+const IGNORE_DIRS = new Set([
+    "node_modules",
+    ".git",
+    "dist",
+    "build",
+    "target",
+    ".venv",
+    "venv",
+    "__pycache__",
+    ".pytest_cache",
+    ".mypy_cache",
+    ".next",
+    ".nuxt",
+    "vendor", // PHP composer deps
+    "site-packages", // inside .venv
+    ".tox",
+    "coverage",
+    ".idea",
+    ".vscode",
+]);
+const EXTENSION_MAP = {
+    ".py": "python",
+    ".php": "php",
+    ".ts": "typescript",
+    ".tsx": "typescript",
+    ".js": "javascript",
+    ".jsx": "javascript",
+    ".mjs": "javascript",
+    ".cjs": "javascript",
+    ".kt": "kotlin",
+    ".kts": "kotlin",
+    ".go": "go",
+    ".rs": "rust",
+    ".rb": "ruby",
+};
+const MAX_FILES_SCANNED = 2000;
+/**
+ * Scan a directory for source file extensions, returning which languages
+ * are present. Short-circuits once all tracked languages are found.
+ */
+export async function detectProjectLanguages(root) {
+    const found = {
+        python: false,
+        php: false,
+        typescript: false,
+        javascript: false,
+        kotlin: false,
+        go: false,
+        rust: false,
+        ruby: false,
+    };
+    let filesScanned = 0;
+    async function walk(dir) {
+        if (filesScanned >= MAX_FILES_SCANNED)
+            return;
+        if (allDetected(found))
+            return;
+        let entries;
+        try {
+            entries = await readdir(dir, { withFileTypes: true });
+        }
+        catch {
+            return;
+        }
+        for (const entry of entries) {
+            if (filesScanned >= MAX_FILES_SCANNED)
+                return;
+            if (allDetected(found))
+                return;
+            if (entry.name.startsWith(".") && entry.name !== ".github")
+                continue;
+            if (IGNORE_DIRS.has(entry.name))
+                continue;
+            const fullPath = join(dir, entry.name);
+            if (entry.isDirectory()) {
+                await walk(fullPath);
+            }
+            else if (entry.isFile()) {
+                filesScanned++;
+                const dot = entry.name.lastIndexOf(".");
+                if (dot === -1)
+                    continue;
+                const ext = entry.name.slice(dot);
+                const lang = EXTENSION_MAP[ext];
+                if (lang)
+                    found[lang] = true;
+            }
+        }
+    }
+    try {
+        const rootStat = await stat(root);
+        if (!rootStat.isDirectory())
+            return found;
+    }
+    catch {
+        return found;
+    }
+    await walk(root);
+    return found;
+}
+function allDetected(found) {
+    return found.python && found.php && found.typescript && found.javascript
+        && found.kotlin && found.go && found.rust && found.ruby;
+}
+/**
+ * Synchronous variant for use during server startup where top-level await
+ * isn't convenient. Uses readdirSync. Caps at MAX_FILES_SCANNED.
+ */
+export function detectProjectLanguagesSync(root) {
+    const found = {
+        python: false,
+        php: false,
+        typescript: false,
+        javascript: false,
+        kotlin: false,
+        go: false,
+        rust: false,
+        ruby: false,
+    };
+    // Dynamic require to avoid import-order issues in ESM
+    // eslint-disable-next-line @typescript-eslint/no-require-imports
+    const { readdirSync, statSync } = require("node:fs");
+    let filesScanned = 0;
+    function walk(dir) {
+        if (filesScanned >= MAX_FILES_SCANNED)
+            return;
+        if (allDetected(found))
+            return;
+        let entries;
+        try {
+            entries = readdirSync(dir, { withFileTypes: true });
+        }
+        catch {
+            return;
+        }
+        for (const entry of entries) {
+            if (filesScanned >= MAX_FILES_SCANNED)
+                return;
+            if (allDetected(found))
+                return;
+            if (entry.name.startsWith(".") && entry.name !== ".github")
+                continue;
+            if (IGNORE_DIRS.has(entry.name))
+                continue;
+            const fullPath = join(dir, entry.name);
+            if (entry.isDirectory()) {
+                walk(fullPath);
+            }
+            else if (entry.isFile()) {
+                filesScanned++;
+                const dot = entry.name.lastIndexOf(".");
+                if (dot === -1)
+                    continue;
+                const ext = entry.name.slice(dot);
+                const lang = EXTENSION_MAP[ext];
+                if (lang)
+                    found[lang] = true;
+            }
+        }
+    }
+    try {
+        if (!statSync(root).isDirectory())
+            return found;
+    }
+    catch {
+        return found;
+    }
+    walk(root);
+    return found;
+}
+//# sourceMappingURL=language-detect.js.map

package/dist/utils/language-detect.js.map

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package/dist/utils/nextjs-ast-readers.d.ts

@@ -0,0 +1,44 @@
+import type Parser from "web-tree-sitter";
+export interface ZodFieldType {
+    type: string;
+    constraints?: string[];
+    nested?: Record<string, ZodFieldType>;
+    optional?: boolean;
+    nullable?: boolean;
+}
+export interface ZodShape {
+    fields: Record<string, ZodFieldType>;
+    partial: boolean;
+}
+/**
+ * Extract the shape of a top-level Zod schema from a source tree.
+ *
+ * Walks `variable_declarator` nodes and tries each one's initializer. Returns
+ * the first successfully parsed Zod schema, or `null` when no z.object(...) is
+ * found. Other validation libraries (Yup, Joi, etc.) intentionally return null
+ * — downstream tools wrap this and add `schema_lib: "unknown"` at their own
+ * aggregation level.
+ */
+export declare function extractZodSchema(tree: Parser.Tree, _source: string): ZodShape | null;
+export type LinkRefKind = "link" | "router_push" | "router_replace";
+export interface LinkRef {
+    /** Literal href value when isDynamic=false; raw expression text otherwise. */
+    href: string;
+    /** True if the href is a template literal with substitutions or a non-literal expression. */
+    isDynamic: boolean;
+    /** 1-indexed line number of the attribute / call site. */
+    line: number;
+    /** The kind of navigation source. */
+    kind: LinkRefKind;
+}
+/**
+ * Extract navigation target references from a parsed tree:
+ *   - `<Link href="/path">` JSX components
+ *   - `router.push("/path")` / `router.replace("/path")` call sites
+ *
+ * Literal string values populate `href` with the unquoted content and
+ * `isDynamic: false`. Template literals with substitutions and identifier
+ * references populate `href` with the raw expression text and `isDynamic: true`.
+ */
+export declare function extractLinkHrefs(tree: Parser.Tree, _source: string): LinkRef[];
+//# sourceMappingURL=nextjs-ast-readers.d.ts.map

package/dist/utils/nextjs-ast-readers.d.ts.map

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