codesift-mcp 0.2.18 → 0.4.0

package/dist/tools/coupling-tools.js

@@ -0,0 +1,262 @@
+import { execFileSync } from "node:child_process";
+import { getCodeIndex } from "./index-tools.js";
+import { collectImportEdges } from "../utils/import-graph.js";
+// ---------------------------------------------------------------------------
+// fan_in_fan_out
+// ---------------------------------------------------------------------------
+export async function fanInFanOut(repo, options) {
+    const index = await getCodeIndex(repo);
+    if (!index) {
+        throw new Error(`Repository "${repo}" not found. Index it first with index_folder.`);
+    }
+    const topN = options?.top_n ?? 20;
+    const focusPath = options?.path;
+    const minFanIn = options?.min_fan_in ?? 0;
+    const minFanOut = options?.min_fan_out ?? 0;
+    // Collect ALL edges — we cannot pre-filter via collectImportEdges because
+    // that only reads imports FROM files in the filter, which loses inbound
+    // edges from outside the focus area. Post-filter after collection instead.
+    const edges = await collectImportEdges(index);
+    // Build directed fan-in and fan-out maps
+    const fanInMap = new Map(); // file → set of importers
+    const fanOutMap = new Map(); // file → set of imports
+    for (const edge of edges) {
+        // Keep edges where at least one side is in the focus path
+        if (focusPath && !edge.from.startsWith(focusPath) && !edge.to.startsWith(focusPath)) {
+            continue;
+        }
+        // Fan-in: who imports this file
+        if (!fanInMap.has(edge.to))
+            fanInMap.set(edge.to, new Set());
+        fanInMap.get(edge.to).add(edge.from);
+        // Fan-out: what does this file import
+        if (!fanOutMap.has(edge.from))
+            fanOutMap.set(edge.from, new Set());
+        fanOutMap.get(edge.from).add(edge.to);
+    }
+    // Collect all files
+    const allFiles = new Set();
+    for (const f of fanInMap.keys())
+        allFiles.add(f);
+    for (const f of fanOutMap.keys())
+        allFiles.add(f);
+    // Build sorted lists. min_fan_in/min_fan_out filter BEFORE top_n cap so users
+    // can request "all files with fan_in > 50" by setting min_fan_in=50, top_n=Infinity.
+    const fanInEntries = [...fanInMap.entries()]
+        .map(([file, importers]) => ({
+        file,
+        count: importers.size,
+        connections: [...importers].sort(),
+    }))
+        .filter((m) => m.count >= minFanIn)
+        .sort((a, b) => b.count - a.count)
+        .slice(0, topN);
+    const fanOutEntries = [...fanOutMap.entries()]
+        .map(([file, imports]) => ({
+        file,
+        count: imports.size,
+        connections: [...imports].sort(),
+    }))
+        .filter((m) => m.count >= minFanOut)
+        .sort((a, b) => b.count - a.count)
+        .slice(0, topN);
+    // Hub files: both fan-in AND fan-out above 75th percentile
+    const inCounts = [...fanInMap.values()].map((s) => s.size).sort((a, b) => a - b);
+    const outCounts = [...fanOutMap.values()].map((s) => s.size).sort((a, b) => a - b);
+    const inP75 = inCounts.length > 0 ? inCounts[Math.floor(inCounts.length * 0.75)] : 0;
+    const outP75 = outCounts.length > 0 ? outCounts[Math.floor(outCounts.length * 0.75)] : 0;
+    const hubFiles = [];
+    for (const file of allFiles) {
+        const inCount = fanInMap.get(file)?.size ?? 0;
+        const outCount = fanOutMap.get(file)?.size ?? 0;
+        if (inCount > inP75 && outCount > outP75) {
+            hubFiles.push({
+                file,
+                count: inCount + outCount,
+                connections: [`in=${inCount}`, `out=${outCount}`],
+            });
+        }
+    }
+    hubFiles.sort((a, b) => b.count - a.count);
+    // Coupling score: fewer hubs = better
+    const totalFiles = allFiles.size;
+    const score = totalFiles > 0
+        ? Math.max(0, Math.min(100, Math.round(100 - (hubFiles.length / totalFiles) * 100)))
+        : 100;
+    return {
+        fan_in_top: fanInEntries,
+        fan_out_top: fanOutEntries,
+        hub_files: hubFiles.slice(0, topN),
+        coupling_score: score,
+        total_files: totalFiles,
+        total_edges: edges.length,
+    };
+}
+// ---------------------------------------------------------------------------
+// computeCoChangePairs — shared function (extracted from review-diff-tools.ts)
+// ---------------------------------------------------------------------------
+const DEFAULT_SINCE_DAYS = 180;
+const DEFAULT_MIN_SUPPORT = 3;
+const DEFAULT_MAX_FILES_PER_COMMIT = 50;
+export function computeCoChangePairs(repoRoot, options) {
+    const sinceDays = options?.since_days ?? DEFAULT_SINCE_DAYS;
+    const minSupport = options?.min_support ?? DEFAULT_MIN_SUPPORT;
+    const maxFilesPerCommit = options?.max_files_per_commit ?? DEFAULT_MAX_FILES_PER_COMMIT;
+    // maxBuffer: Node default is 1MB which overflows on large repos (>6 mo, 2000+ commits).
+    // Increase to 256MB to cover any reasonable single-repo git log output.
+    // timeout: 30s (was 15s) — large repos need more time to walk history.
+    let raw;
+    try {
+        raw = execFileSync("git", [
+            "log",
+            "--name-only",
+            "--no-merges",
+            "--diff-filter=AMRC",
+            `--since=${sinceDays} days ago`,
+            "--pretty=format:COMMIT %H",
+        ], {
+            cwd: repoRoot,
+            encoding: "utf-8",
+            timeout: 30000,
+            maxBuffer: 256 * 1024 * 1024, // 256MB
+        });
+    }
+    catch (err) {
+        const msg = err instanceof Error ? err.message : String(err);
+        if (msg.includes("ENOBUFS") || msg.includes("maxBuffer")) {
+            throw new Error(`git log output too large for co_change_analysis (>256MB). ` +
+                `Try reducing since_days (current: ${sinceDays}) to limit history scope.`);
+        }
+        if (msg.includes("ETIMEDOUT") || msg.includes("timeout")) {
+            throw new Error(`git log timed out after 30s. Try reducing since_days (current: ${sinceDays}).`);
+        }
+        throw new Error(`co_change_analysis: git log failed — ${msg}`);
+    }
+    // Parse commits robustly using a COMMIT sentinel line. Commits with no
+    // qualifying files (e.g. D-only commits dropped by --diff-filter=AMRC)
+    // produce a COMMIT line with no following file list, which the old
+    // i += 2 block-pairing approach mis-parsed.
+    const lines = raw.split("\n");
+    const fileCommitCounts = new Map();
+    const pairCounts = new Map();
+    let totalCommits = 0;
+    let currentFiles = [];
+    const flushCommit = () => {
+        if (currentFiles.length === 0 || currentFiles.length > maxFilesPerCommit) {
+            currentFiles = [];
+            return;
+        }
+        totalCommits++;
+        for (const file of currentFiles) {
+            fileCommitCounts.set(file, (fileCommitCounts.get(file) ?? 0) + 1);
+        }
+        for (let a = 0; a < currentFiles.length; a++) {
+            for (let b = a + 1; b < currentFiles.length; b++) {
+                const pair = [currentFiles[a], currentFiles[b]].sort().join("\0");
+                pairCounts.set(pair, (pairCounts.get(pair) ?? 0) + 1);
+            }
+        }
+        currentFiles = [];
+    };
+    for (const line of lines) {
+        if (line.startsWith("COMMIT ")) {
+            flushCommit();
+            continue;
+        }
+        const trimmed = line.trim();
+        if (trimmed.length > 0)
+            currentFiles.push(trimmed);
+    }
+    flushCommit(); // final commit
+    // Build CoChangePair[] for all pairs above min_support
+    const pairs = [];
+    for (const [pair, coCount] of pairCounts) {
+        if (coCount < minSupport)
+            continue;
+        const [fileA, fileB] = pair.split("\0");
+        const countA = fileCommitCounts.get(fileA) ?? 0;
+        const countB = fileCommitCounts.get(fileB) ?? 0;
+        const jaccard = coCount / (countA + countB - coCount);
+        pairs.push({
+            file_a: fileA,
+            file_b: fileB,
+            co_commits: coCount,
+            jaccard,
+            support_a: countA,
+            support_b: countB,
+        });
+    }
+    return { pairs, total_commits: totalCommits };
+}
+// ---------------------------------------------------------------------------
+// co_change_analysis
+// ---------------------------------------------------------------------------
+export async function coChangeAnalysis(repo, options) {
+    const index = await getCodeIndex(repo);
+    if (!index) {
+        throw new Error(`Repository "${repo}" not found. Index it first with index_folder.`);
+    }
+    const minJaccard = options?.min_jaccard ?? 0.3;
+    const focusPath = options?.path;
+    const topN = options?.top_n ?? 30;
+    const sinceDays = options?.since_days ?? DEFAULT_SINCE_DAYS;
+    const coChangeOpts = { since_days: sinceDays };
+    if (options?.min_support != null)
+        coChangeOpts.min_support = options.min_support;
+    const { pairs: allPairs, total_commits } = computeCoChangePairs(index.root, coChangeOpts);
+    // Filter by jaccard threshold and focus path
+    let filtered = allPairs.filter((p) => p.jaccard >= minJaccard);
+    if (focusPath) {
+        filtered = filtered.filter((p) => p.file_a.startsWith(focusPath) || p.file_b.startsWith(focusPath));
+    }
+    // Sort by jaccard descending
+    filtered.sort((a, b) => b.jaccard - a.jaccard);
+    const topPairs = filtered.slice(0, topN);
+    // Cluster detection: connected components where jaccard > 0.7
+    const clusters = findClusters(filtered.filter((p) => p.jaccard > 0.7));
+    return {
+        pairs: topPairs,
+        clusters,
+        total_commits_analyzed: total_commits,
+        period: `${sinceDays} days`,
+    };
+}
+// ---------------------------------------------------------------------------
+// Cluster detection via union-find
+// ---------------------------------------------------------------------------
+function findClusters(pairs) {
+    const parent = new Map();
+    function find(x) {
+        if (!parent.has(x))
+            parent.set(x, x);
+        let root = parent.get(x);
+        while (root !== parent.get(root)) {
+            root = parent.get(root);
+        }
+        parent.set(x, root); // path compression
+        return root;
+    }
+    function union(a, b) {
+        const ra = find(a);
+        const rb = find(b);
+        if (ra !== rb)
+            parent.set(ra, rb);
+    }
+    for (const p of pairs) {
+        union(p.file_a, p.file_b);
+    }
+    // Group by root
+    const groups = new Map();
+    for (const file of parent.keys()) {
+        const root = find(file);
+        if (!groups.has(root))
+            groups.set(root, []);
+        groups.get(root).push(file);
+    }
+    // Return only clusters with 2+ files, sorted by size descending
+    return [...groups.values()]
+        .filter((g) => g.length >= 2)
+        .sort((a, b) => b.length - a.length)
+        .map((g) => g.sort());
+}
+//# sourceMappingURL=coupling-tools.js.map

package/dist/tools/coupling-tools.js.map

@@ -0,0 +1 @@
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package/dist/tools/dependency-audit-tools.d.ts

@@ -0,0 +1,65 @@
+/**
+ * dependency_audit — composite tool that runs 4 dependency health checks
+ * in parallel: vulnerabilities, licenses, freshness, and lockfile integrity.
+ * Wraps existing CLI tools (npm/pnpm/yarn/bun audit + outdated).
+ */
+export type Severity = "low" | "moderate" | "high" | "critical";
+export interface Vulnerability {
+    package: string;
+    severity: Severity;
+    via: string[];
+    fix_available: boolean;
+    advisory_url?: string;
+}
+export interface LicenseInfo {
+    package: string;
+    license: string;
+    is_problematic: boolean;
+}
+export interface OutdatedPackage {
+    package: string;
+    current: string;
+    latest: string;
+    major_gap: number;
+}
+export interface LockfileIssue {
+    type: "missing" | "drift" | "duplicate";
+    package?: string;
+    message: string;
+}
+export type PackageManager = "npm" | "pnpm" | "yarn" | "bun" | "unknown";
+export interface DependencyAuditResult {
+    workspace: string;
+    package_manager: PackageManager;
+    vulnerabilities: {
+        total: number;
+        by_severity: {
+            critical: number;
+            high: number;
+            moderate: number;
+            low: number;
+        };
+        findings: Vulnerability[];
+    };
+    licenses: {
+        total: number;
+        problematic: LicenseInfo[];
+        distribution: Record<string, number>;
+    };
+    freshness: {
+        outdated_count: number;
+        major_gaps: OutdatedPackage[];
+    };
+    lockfile: {
+        present: boolean;
+        issues: LockfileIssue[];
+    };
+    duration_ms: number;
+    errors: string[];
+}
+export declare function dependencyAudit(repo: string, options?: {
+    workspace_path?: string;
+    skip_licenses?: boolean;
+    min_severity?: Severity;
+}): Promise<DependencyAuditResult>;
+//# sourceMappingURL=dependency-audit-tools.d.ts.map

package/dist/tools/dependency-audit-tools.d.ts.map

@@ -0,0 +1 @@
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