codebaseiq 0.1.0 → 0.2.0

package/dist/chunk-RRPK327J.js

@@ -0,0 +1,20 @@
+import{m as u,r as p,t as h}from"./chunk-6ZV5EDUT.js";import{a as c,e as d}from"./chunk-PLZXWZHY.js";import{h as l}from"./chunk-327YK6TB.js";import b from"better-sqlite3";var f=["busy_timeout = 5000","query_only = ON","temp_store = MEMORY","cache_size = -64000","mmap_size = 268435456"],i=class{constructor(t,e){this.connection=t;this.releaseGenerationReader=e}connection;releaseGenerationReader;active=!0;initialize(t){try{for(let e of f)this.connection.pragma(e);t(this.connection)}catch(e){try{this.close()}catch(n){throw new AggregateError([e,n],"SQLite initialization and rollback both failed.",{cause:n})}throw e}}close(){if(!this.active)return;this.active=!1;let t,e;try{this.connection.close()}catch(n){t=n}try{this.releaseGenerationReader()}catch(n){e=n}if(t!==void 0&&e!==void 0)throw new AggregateError([t,e],"SQLite connection close and generation-reader release both failed.");if(t!==void 0)throw t;if(e!==void 0)throw e}},g=["node_modules",".git","dist","build","out","coverage","target",".next",".nuxt",".cache",".turbo",".nbb",".cpcache",".shadow-cljs",".codebaseiq-cache","__pycache__",".venv","venv"],m=class{db;config;generation;pathFilter;connection;connectionOwnership;statementCache=new Map;closed=!1;constructor(t,e){this.config=t,this.pathFilter=e??null;let n=S(t),o=new i(n.db,n.release);try{o.initialize(E),this.generation=n.generation,this.connection=n.db,this.connectionOwnership=o,this.db=w(n.db)}catch(r){try{o.close()}catch(s){throw new AggregateError([r,s],"SQLite construction and rollback both failed.",{cause:s})}throw r}}isIgnored(t){return this.pathFilter?.isIgnored(t)??!1}get localSymbolPredicate(){return`(
+      EXISTS (
+        SELECT 1
+        FROM defn_enclosing_ranges local_der
+        JOIN documents local_d ON local_der.document_id = local_d.id
+        WHERE local_der.symbol_id = gs.id
+          ${this.pathExclusionsFor("local_d").trimStart()}
+      )
+      OR EXISTS (
+        SELECT 1
+        FROM mentions local_m
+        JOIN chunks local_c ON local_m.chunk_id = local_c.id
+        JOIN documents local_d ON local_c.document_id = local_d.id
+        WHERE local_m.symbol_id = gs.id
+          AND local_m.role = 1
+          ${this.pathExclusionsFor("local_d").trimStart()}
+      )
+    )`}get pathExclusions(){return this.pathExclusionsFor("d")}get symbolNoise(){return this.symbolNoiseFor("gs")}pathExclusionsFor(...t){return t.flatMap(e=>g.flatMap(n=>[`AND ${e}.relative_path NOT LIKE '${n}/%'`,`AND ${e}.relative_path NOT LIKE '%/${n}/%'`])).join(`
+      `)}symbolNoiseFor(t){return`AND ${t}.symbol NOT LIKE '%().(%' AND ${t}.symbol NOT LIKE '%typeLiteral%'`}all(t,...e){return this.statement(t).all(...e)}get(t,...e){return this.statement(t).get(...e)}close(){if(this.closed)return;this.closed=!0,this.statementCache.clear();let t,e;try{d(this)}catch(n){t=n}try{this.connectionOwnership.close()}catch(n){e=n}if(t!==void 0&&e!==void 0)throw new AggregateError([t,e],"Database-owned resource and SQLite connection cleanup both failed.");if(t!==void 0)throw t;if(e!==void 0)throw e}statement(t){let e=this.statementCache.get(t);return e||(e=this.connection.prepare(t),this.statementCache.set(t,e)),e}};function w(a){return Object.freeze({prepare(t){let e=a.prepare(t);if(!e.readonly||!e.reader)throw new Error("ScipDatabase.db only permits read-only statements that return rows.");return y(e)}})}function y(a){let t={get:(...e)=>a.get(...e),all:(...e)=>a.all(...e),iterate:(...e)=>a.iterate(...e),pluck(e){return e===void 0?a.pluck():a.pluck(e),t},expand(e){return e===void 0?a.expand():a.expand(e),t},raw(e){return e===void 0?a.raw():a.raw(e),t},bind(...e){return a.bind(...e),t},columns:()=>a.columns(),safeIntegers(e){return e===void 0?a.safeIntegers():a.safeIntegers(e),t}};return Object.freeze(t)}function E(a){if(!a.prepare("SELECT 1 AS present FROM sqlite_master WHERE type = 'table' AND name = 'documents'").get())return;let e=a.prepare("SELECT relative_path FROM documents").iterate();for(let n of e)l(n.relative_path)}function S(a){for(let t=0;t<4;t+=1){let e=u(a),n=e.generation,o;try{o=new b(c(n.databasePath),{readonly:!0,fileMustExist:!0})}catch(r){throw e.release(),r}if(n.source==="immutable")return{db:o,generation:n,release:e.release};try{let r=p(a);if(n.databaseFileIdentity===h(n.databasePath)&&r.source==="legacy"&&r.identity===n.identity&&r.databaseFileIdentity===n.databaseFileIdentity&&r.metadataRaw===n.metadataRaw)return{db:o,generation:n,release:e.release}}catch(r){throw o.close(),e.release(),r}o.close(),e.release()}throw new Error("SQLite index publication changed repeatedly while opening a coherent generation.")}export{m as a};
+//# sourceMappingURL=chunk-RRPK327J.js.map

package/dist/chunk-RVYLJDXC.js

@@ -0,0 +1,21 @@
+import{g as L,h as X,i as F,j as _e,k as Fe,l as Le,r as Pe,s as y,t as Ee,v as Ae,w as g,x as we}from"./chunk-PLZXWZHY.js";import{H,c as v}from"./chunk-327YK6TB.js";import{basename as Re}from"path";var It=L("indexed-document-paths",{clearGroups:["whole-project"]});function O(e,t={}){let n=Vt(t);return[...It.get(e,n,()=>{let o=t.scope?"AND relative_path LIKE ?":"",s=t.like?"AND relative_path LIKE ?":"",i=[...t.scope?[`%${t.scope}%`]:[],...t.like?[t.like]:[]],a=e.all(`SELECT relative_path
+       FROM documents
+       WHERE 1 = 1
+         ${e.pathExclusionsFor("documents")}
+         ${o}
+         ${s}
+       ORDER BY relative_path`,...i).map(l=>l.relative_path),c=t.extensions?a.filter(l=>t.extensions.some(p=>l.toLowerCase().endsWith(p.toLowerCase()))):a;return t.includeIgnored===!1?c.filter(l=>!e.isIgnored(l)):c})]}function Vt(e){let t=e.extensions?[...new Set(e.extensions.map(n=>n.toLowerCase()))].sort():null;return JSON.stringify({scope:e.scope??null,like:e.like??null,extensions:t,includeIgnored:e.includeIgnored!==!1})}function Mo(e,t,n){let r=Ve(t);if(!r)return[];let o=e.all(`SELECT relative_path
+       FROM documents
+       WHERE relative_path = ?
+         ${e.pathExclusionsFor("documents")}`,r).filter(c=>!e.isIgnored(c.relative_path)).map(c=>({relativePath:c.relative_path,score:Ie(c.relative_path,r)}));if(o.length>0)return o;let s=O(e,{includeIgnored:!1}).map(c=>({relativePath:c,score:Ie(c,r)})).filter(c=>c.score>0).sort((c,l)=>l.score-c.score||c.relativePath.localeCompare(l.relativePath)),i=s.filter(c=>c.score>=1100);if(i.length>0)return n.allowMultiple?i:[i[0]];let a=s.filter(c=>c.score>=800);return a.length>0?n.allowMultiple?a:[a[0]]:n.allowMultiple?s:s.slice(0,1)}function Ie(e,t){let n=Ve(e),r=Re(n),o=Re(t),s=0;return n===t&&(s+=1200),n.endsWith(`/${t}`)&&(s+=1100),r===o&&(s+=900),n.startsWith(`${t}/`)&&(s+=850),n.includes(t)&&(s+=250),s}function Ve(e){return e.trim().replace(/\\/g,"/").replace(/^\.\//,"").replace(/^\/+/,"").replace(/\/+$/,"")}import{extname as je}from"path";var jt={".rs":"rust",".ts":"typescript",".mts":"typescript",".cts":"typescript",".tsx":"tsx",".js":"javascript",".jsx":"javascript",".mjs":"javascript",".cjs":"javascript",".py":"python",".pyi":"python",".java":"java",".kt":"kotlin",".kts":"kotlin",".scala":"scala",".sc":"scala",".rb":"ruby",".c":"c",".h":"c",".cc":"cpp",".cpp":"cpp",".cxx":"cpp",".hpp":"cpp",".hh":"cpp",".hxx":"cpp",".cs":"csharp",".php":"php",".vb":"vb",".clj":"clojure",".cljs":"clojure",".cljc":"clojure"};function D(e){return jt[je(e).toLowerCase()]??null}function ce(e){return je(e).toLowerCase()===".vue"}import{createRequire as Bt}from"module";var d=Bt(import.meta.url),J=null,Be=!1;function $t(){if(Be)return null;if(J)return J;try{return J=d("tree-sitter"),J}catch{return Be=!0,null}}var $e=new Map,Z=new Set;function Ot(e){if(Z.has(e))return null;let t=$e.get(e);if(t)return t;let n;try{switch(e){case"rust":n=d("tree-sitter-rust");break;case"typescript":n=d("tree-sitter-typescript").typescript;break;case"tsx":n=d("tree-sitter-typescript").tsx;break;case"javascript":n=d("tree-sitter-javascript");break;case"python":n=d("tree-sitter-python");break;case"java":n=d("tree-sitter-java");break;case"kotlin":n=d("tree-sitter-kotlin");break;case"scala":n=d("tree-sitter-scala");break;case"ruby":n=d("tree-sitter-ruby");break;case"c":n=d("tree-sitter-c");break;case"cpp":n=d("tree-sitter-cpp");break;case"csharp":n=d("tree-sitter-c-sharp");break;case"php":n=d("tree-sitter-php").php;break;case"vb":{let r=d("tree-sitter-vb-dotnet");n=r.language??r;break}case"clojure":return Z.add(e),null}}catch{return Z.add(e),null}return $e.set(e,n),n}var Oe=new Map;function Dt(e){let t=Oe.get(e);if(t)return t;let n=Ot(e);if(!n)return null;let r=$t();if(!r)return null;let o=new r;try{o.setLanguage(n)}catch{return Z.add(e),null}return Oe.set(e,o),o}function Wt(e,t){return e.parse(r=>r>=t.length?null:t.slice(r,Math.min(t.length,r+16384)))}function P(e,t){let n=Dt(e);if(!n)return null;try{return Wt(n,t)}catch{return null}}import{posix as le}from"path";import{parse as Ut}from"@vue/compiler-sfc";var Mt=F("vue-sfc-units");function R(e,t){let n=Ue(t),r=g(e,n);return Mt.get(e,n,r,()=>ue(e,n,r))}function Ue(e){return e.replace(/\\/g,"/").replace(/^\.\//,"")}function zt(e){let t=e?.toLowerCase();return!t||t==="js"||t==="javascript"||t==="jsx"?"javascript":t==="ts"||t==="typescript"?"typescript":t==="tsx"?"tsx":null}function E(e){return!e||e.body.length===0?0:e.body.split(`
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c=K(e,r);if(!t||t.boundaries.length===0)return{configured:!1,boundaries:[],edges:[],forbiddenEdges:[],reciprocalPairs:[],cycles:[],coarseBoundaries:[],staleAllowances:[],boundaryLimits:[],fragileEdges:[],testBoundaryViolations:[],coverage:{totalFiles:c.length,mappedFiles:0,unmappedFiles:[],ambiguousFiles:[]},policyCoverage:{declaredRows:0,totalBoundaries:0,missingRows:[],requiresCompletePolicy:!1,requiresCompleteCoverage:!1,requiresMinimalPolicy:!1}};let s=new Map,i=new Map(t.boundaries.map(n=>[n.name,new Set])),a=[],l=[];for(let n of c){let f=t.boundaries.filter(p=>p.paths.some(F=>v(F,n))).map(p=>p.name).sort();if(f.length===0)a.push(n);else if(f.length>1)l.push({file:n,boundaries:f});else{let p=f[0];s.set(n,p),i.get(p).add(n)}}let g=new Map;for(let[n,f]of e){let p=s.get(n);if(p)for(let F of f){let R=s.get(F);if(!R||p===R)continue;let $=w(p,R),B=g.get($);B||(B={from:p,to:R,fileEdges:[],importers:new Set,importedFiles:new 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he(e){return!!e&&(Object.keys(e.allowedDependencies??{}).length>0||e.requireCompletePolicy===!0||e.requireCompleteCoverage===!0||e.requireAcyclic===!0||e.requireResolvedBoundaries===!0||e.requireMinimalPolicy===!0||e.maxBoundaryFanOut!==void 0||e.maxBoundaryFiles!==void 0||e.boundaries.some(r=>r.maxFiles!==void 0)||(e.testPaths?.length??0)>0)}function K(e,r){let t=new Set(r);for(let[o,c]of e){t.add(o);for(let s of c)t.add(s)}return[...t].sort()}function N(e,r){let t=[...e.fileEdges].sort((o,c)=>o.fromFile.localeCompare(c.fromFile)||o.toFile.localeCompare(c.toFile));return{from:e.from,to:e.to,policyStatus:X(r,e.from,e.to),fileEdgeCount:t.length,importerCount:e.importers.size,importedFileCount:e.importedFiles.size,examples:t.slice(0,5),fragile:t.length===1}}function X(e,r,t){return!e.allowedDependencies||!Object.hasOwn(e.allowedDependencies,r)?"undeclared":e.allowedDependencies[r].includes(t)?"allowed":"forbidden"}function J(e,r,t){let o=[...e].sort(),c=new 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a=c.get(s.name)??0;a>e.maxBoundaryFanOut&&o.push({boundary:s.name,kind:"fan-out",observed:a,limit:e.maxBoundaryFanOut})}let i=s.maxFiles??e.maxBoundaryFiles;if(i!==void 0){let a=t.get(s.name)?.size??0;a>i&&o.push({boundary:s.name,kind:"files",observed:a,limit:i})}}return o.sort((s,i)=>s.boundary.localeCompare(i.boundary)||s.kind.localeCompare(i.kind))}function Z(e){let r=P(e);return r==="test"||r==="entry"}function ee(e){let r=e.lastIndexOf("/");return r===-1?".":e.slice(0,r)}function w(e,r){return`${e}\0${r}`}function te(e,r){return e.from.localeCompare(r.from)||e.to.localeCompare(r.to)}export{b as a,G as b,ge as c,ye as d,he as e,Q as f};
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c=K(e,r);if(!t||t.boundaries.length===0)return{configured:!1,boundaries:[],edges:[],forbiddenEdges:[],reciprocalPairs:[],cycles:[],coarseBoundaries:[],staleAllowances:[],boundaryLimits:[],fragileEdges:[],testBoundaryViolations:[],coverage:{totalFiles:c.length,mappedFiles:0,unmappedFiles:[],ambiguousFiles:[]},policyCoverage:{declaredRows:0,totalBoundaries:0,missingRows:[],requiresCompletePolicy:!1,requiresCompleteCoverage:!1,requiresMinimalPolicy:!1}};let s=new Map,i=new Map(t.boundaries.map(n=>[n.name,new Set])),a=[],l=[];for(let n of c){let f=t.boundaries.filter(p=>p.paths.some(F=>v(F,n))).map(p=>p.name).sort();if(f.length===0)a.push(n);else if(f.length>1)l.push({file:n,boundaries:f});else{let p=f[0];s.set(n,p),i.get(p).add(n)}}let g=new Map;for(let[n,f]of e){let p=s.get(n);if(p)for(let F of f){let R=s.get(F);if(!R||p===R)continue;let $=w(p,R),B=g.get($);B||(B={from:p,to:R,fileEdges:[],importers:new Set,importedFiles:new 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Ye(e,t,n){let r=tt(e,t),o=ze(r);!o||o.claimId!==n||(w(r,{force:!0}),x(h(e,T)))}function Ze(e){for(let t of b(h(e,Ke),".tmp"))w(t,{force:!0})}function Jt(e,t){return b(e).filter(n=>!t(n)).length}function b(e,t=".json"){return $t(e)?Ft(e,{withFileTypes:!0}).filter(n=>n.isFile()&&n.name.endsWith(t)).map(n=>h(e,n.name)).sort():[]}function fe(e,t){try{let n=JSON.parse(f(e,"watch refresh request record"));return t(n)?n:null}catch{return null}}function et(e,t){return h(e,j,`${t}.json`)}function tt(e,t){return h(e,T,`${t}.json`)}function nt(e,t){return h(e,$,`${t}.json`)}function Ve(e,t){return F(nt(e,t))!==null}function zt(e){if(e===void 0)return Bt;if(!Number.isFinite(e)||e<=0)throw new Error("Watch refresh request ttlMs must be positive.");return Math.floor(e)}function Qt(e){let t=e?.trim();return t?t.slice(0,512):void 0}function q(e){return typeof e=="string"&&/^[a-z0-9][a-z0-9-]{0,127}$/i.test(e)}function Xt(e,t){return Date.parse(e.createdAt)-Date.parse(t.createdAt)||e.requestId.localeCompare(t.requestId)}function Yt(e,t){return Date.parse(t)<Date.parse(e)?t:e}var ot=5e3,rn=6e3,on=1e3,ge=10,sn=new Set(["capabilities","check-deps","config-validate","doctor","init","install-skills","reindex","setup","setup-agent","status","suppress","uninstall","watch"]);function Rr(e){let t=e.classification;if(t.kind!=="live")return;let{state:n}=t;return n.watcher.state==="idle"&&n.lastError===void 0?n.indexGeneration:void 0}function an(e,t=process.env){return t.CODEBASEIQ_SKIP_WATCH_SERVICE!=="1"&&!e.startsWith("__")&&!sn.has(e)}function Ar(e){let t=e.env??process.env;if(t.CODEBASEIQ_SKIP_WATCH_SERVICE==="1")return{kind:"skipped",reason:"environment"};if(!an(e.commandName,t))return{kind:"skipped",reason:"excluded-command"};if(e.config.watch?.enabled!==!0)return{kind:"skipped",reason:"disabled"};try{let 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t=e.runtime??Se,n=at(e.projectRoot,e.cliVersion,e.gitContext),r=U(e,n),o=ye("ensure",r.classification);if(o.kind==="reuse")return G(r.paths.activityPath,t),{disposition:"reused",state:o.state};if(o.kind==="refuse-replace")throw new Error(`codebaseiq watch service pid ${o.state.pid} is still alive but its heartbeat is old. 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Stop the foreground watcher before starting the service.`)}r.classification.kind==="stale"&&O(r.paths,r.classification.state.pid,t)}else throw new Error(`Unexpected ensure action: ${o.kind}`);if(r=U(e,n),o=ye("ensure",r.classification),o.kind==="reuse")return G(r.paths.activityPath,t),{disposition:"reused",state:o.state};if(o.kind==="refuse-replace")throw new Error(`codebaseiq watch service pid ${o.state.pid} remains alive with an old heartbeat; automatic replacement is not authorized.`);let i=e.serverPath??nn(new URL("./watch-server.js",import.meta.url));t.spawnServer(i,n.projectRoot,e.cliVersion,e.watchOverrides??{},e.spawnEnv);let s=it(e,n,t,e.startupTimeoutMs??ot);if(!s)throw new Error(`codebaseiq watch service did not become ready within ${e.startupTimeoutMs??ot}ms.`);return G(r.paths.activityPath,t),{disposition:"started",state:s}}function Cr(e){let 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t.reason==="old-heartbeat"?{kind:"signal-stop",state:t.state}:{kind:"clean-stale",state:t.state};case"live":case"incompatible":return{kind:"signal-stop",state:t.state};default:return me(t)}default:return me(e)}}function Or(e){return e.idleTimeoutMs===0||e.watcher.state!=="idle"||(e.liveSessions??0)>0?!1:e.nowMs-e.lastActivityAtMs>=e.idleTimeoutMs}function it(e,t,n,r){let o=n.monotonicNow??_,i=o()+r;for(;o()<=i;){let s=U(e,t).classification;if(s.kind==="live")return s.state;n.sleep(ge)}return null}function ve(e,t,n){let{pid:r}=e;if(!n.isProcessAlive(r))return;st(e,n),n.signalProcess(r);let o=t.stopTimeoutMs??rn,i=n.monotonicNow??_,s=i()+o;for(;i()<=s;){if(!n.isProcessAlive(r))return;n.sleep(ge)}if(!n.forceSignalProcess)throw new Error(`codebaseiq watch service pid ${r} did not stop within ${o}ms and forced termination is unavailable.`);st(e,n),n.forceSignalProcess(r);let a=t.forceStopTimeoutMs??on,c=i()+a;for(;i()<=c;){if(!n.isProcessAlive(r))return;let d=n.readProcessIdentity(r);if(e.processIdentity&&d&&!ee(e.processIdentity,d))return;n.sleep(ge)}throw new Error(`codebaseiq watch service pid ${r} remained alive ${a}ms after forced termination.`)}function O(e,t,n){if(rt(e.statePath,{force:!0}),rt(e.activityPath,{force:!0}),ke(e.lockPath)?.pid===t&&!n.isProcessAlive(t)){let o={...ie,wallNow:n.now,isProcessAlive:n.isProcessAlive,readProcessIdentity:n.readProcessIdentity},i=se(e.lockPath,{parseLegacy:B,runtime:o});_e(e.lockPath,i,{parseLegacy:B,runtime:o})}}function ln(e,t,n){return`error: codebaseiq watch is already running for ${V(t)}${n?` (pid ${n.pid}, started ${n.startedAt}; lock: ${e})`:` (lock: ${e})`}. Stop that watcher before starting another.`}function G(e,t){try{(t.recordActivity??ct)(e,t.now())}catch(n){let r=un(n);if(r!=="EPERM"&&r!=="EACCES"&&r!=="EROFS")throw n}}function un(e){return e.code}var Se={now:Date.now,monotonicNow:_,isProcessAlive:re,readProcessIdentity:te,spawnServer(e,t,n,r,o){if(!en(e))throw new Error(`Watch service helper was not found at ${e}. Run npm run build first.`);Zt(process.execPath,[e,t,n,JSON.stringify(r)],{detached:!0,stdio:"ignore",windowsHide:!0,env:{...process.env,...o,CODEBASEIQ_SKIP_WATCH_SERVICE:"1"}}).unref()},signalProcess(e){process.kill(e,"SIGTERM")},forceSignalProcess(e){process.kill(e,"SIGKILL")},sleep(e){let t=new Int32Array(new SharedArrayBuffer(4));Atomics.wait(t,0,0,e)}};function st(e,t){if(!e.processIdentity)throw new Error(`Refusing to signal codebaseiq watch pid ${e.pid}: its ownership record has no process identity.`);let n=t.readProcessIdentity(e.pid);if(!n)throw new Error(`Refusing to signal codebaseiq watch pid ${e.pid}: its process identity is unavailable.`);if(!ee(e.processIdentity,n))throw new Error(`Refusing to signal codebaseiq watch pid ${e.pid}: its process identity does not match the ownership record.`)}function me(e){throw new Error(`Unhandled watch service value: ${JSON.stringify(e)}`)}import{existsSync as m,mkdirSync as pn,rmdirSync as hn,unlinkSync as fn}from"fs";import{homedir as mn}from"os";import{basename as vt,dirname as Q,isAbsolute as gn,join as l,resolve as xe}from"path";import{fileURLToPath as yn}from"url";var ut=["- `codebaseiq search <exact-text>` \u2014 Where does this exact text occur in current project text, and which aligned compiler symbol owns each line? Requires: One exact text literal or deliberately bounded regular expression; insert `--` before a literal that starts with a dash.","- `codebaseiq outline <file>` \u2014 What symbols and nesting exist in this file? Requires: One exact current project file path.","- `codebaseiq entrypoints [text]` \u2014 Which detected external roots or entry-surface candidates match this text? Requires: Optional exact text to filter candidates; otherwise the current indexed repository.","- `codebaseiq evidence` \u2014 Which exact execution, runtime, data, state, temporal, contract, identity, ownership, or dependency relationships surround these referents? Which related source must be read only when graph evidence leaves a named implementation gap? Requires: One or more exact symbol, file:line, or literal roots plus explicit family, direction, depth, and output bound.","- `codebaseiq inspect` \u2014 Which related source units across several known text, symbol, or location anchors should be read together? Requires: One or more exact text, symbol, or file:line selectors naming the unresolved behavior.","- `codebaseiq code <selectors...>` \u2014 What exact source defines these symbols, ranges, or file surfaces? Requires: One or more exact symbols, file:line ranges, or file paths.","- Choose graph controls explicitly: `execution incoming` \u2014 Who can call or reach this?; `execution outgoing` \u2014 What can this call or reach?; `dataflow incoming` \u2014 Where can this value come from?; `dataflow outgoing` \u2014 Where can this value go?; `runtime both` \u2014 Which producer and consumer rendezvous?; `state both` \u2014 What resource is observed or changed?; `temporal both` \u2014 What occurs before or after this?; `contract both` \u2014 What interface constrains this?; `identity both` \u2014 Are these observations the same entity?; `ownership both` \u2014 What contains or owns this?; `dependencies outgoing` \u2014 What does this statically rely on?. The CLI does not infer them from English intent.","- Calibration: exact is directly observed; derived is deterministically computed; candidate needs confirmation; mixed discloses its constituents; unknown cannot support a stronger claim. Read coverage and recovery before making absence claims.","- The controls above are complete for ordinary exploration. Run `codebaseiq capabilities --matrix` only when a named claim depends on uncertain provider support; do not run it for routine orientation."],_r=[{stage:"locate",id:"search",command:"search <exact-text>",question:"Where does this exact text occur in current project text, and which aligned compiler symbol owns each line?",requiredInput:"One exact text literal or deliberately bounded regular expression; insert `--` before a literal that starts with a dash.",returnedFact:"exact cardinality, bounded identities and source, and scope commands that recover withheld matches",evidenceCeiling:"Exact current-text cardinality and locations within reported text coverage; compiler ownership only where aligned.",nonClaim:"Structural source ranking orders exact matches but does not establish task relevance. A literal co-occurrence does not establish a graph relationship.",outputCost:"small",contrasts:["outline: search locates exact text across files; outline enumerates compiler-owned constructs in one known file."],gapClosingCommands:["evidence","inspect","code"]},{stage:"locate",id:"outline",command:"outline <file>",question:"What symbols and nesting exist in this file?",requiredInput:"One exact current project file path.",returnedFact:"symbol names, nesting, and line ranges",evidenceCeiling:"Exact compiler-owned constructs and ranges when the file is indexed; no invented semantic overlay.",nonClaim:"File ownership and nesting do not establish execution or task relevance.",outputCost:"small",contrasts:["search: outline enumerates constructs in one known file; search locates exact text across current project text.","code: outline returns identities and ranges; code materializes exact source for selected identities."],gapClosingCommands:["evidence","inspect","code"]},{stage:"locate",id:"entrypoints",command:"entrypoints [text]",question:"Which detected external roots or entry-surface candidates match this text?",requiredInput:"Optional exact text to filter candidates; otherwise the current indexed repository.",returnedFact:"entry symbols with files, confidence, evidence, and indexed caller counts",evidenceCeiling:"Source/compiler-grounded entry evidence and indexed caller counts; exported-only candidates remain candidates.",nonClaim:"A package-public export or zero indexed callers is an entry candidate, not proof of runtime ingress. Entry classification does not establish that the callable executes.",outputCost:"bounded",contrasts:["entry-map: entrypoints locates possible external roots; entry-map traverses static calls from one selected root.","search: entrypoints classifies callable roots; search only locates exact text and ownership."],gapClosingCommands:["evidence","inspect","code"]},{stage:"project",id:"evidence",command:"evidence",question:"Which exact execution, runtime, data, state, temporal, contract, identity, ownership, or dependency relationships surround these referents? Which related source must be read only when graph evidence leaves a named implementation gap?",requiredInput:"One or more exact symbol, file:line, or literal roots plus explicit family, direction, depth, and output bound.",returnedFact:"batched exact selectors and typed graph relationships; compact endpoints with exact locations and follow-up commands; coverage and recoverable omissions; exact source-recovery command when source was requested with a graph projection; explicit ambiguity failure with exact rerun commands",evidenceCeiling:"Typed edges only to each registered provider ceiling within the explicitly selected projection and reported coverage.",nonClaim:"The projection does not infer which relationships are relevant to the user task. Reference, dependency, data, state, temporal, contract, and identity edges do not become execution claims.",outputCost:"bounded",contrasts:["refs: refs enumerates direct reference sites; evidence traverses explicitly selected typed relationships.","call-graph: call-graph specializes in static calls; evidence can combine execution with other selected families.","value-flow: value-flow specializes in proved transfers; evidence projects bounded dataflow alongside other families.","dependence-slice: dependence-slice computes a program-dependence slice; evidence performs bounded graph projection."],gapClosingCommands:["inspect","code"]},{stage:"read",id:"inspect",command:"inspect",question:"Which related source units across several known text, symbol, or location anchors should be read together?",requiredInput:"One or more exact text, symbol, or file:line selectors naming the unresolved behavior.",returnedFact:"one ranked, deduplicated semantic packet plus exact selector cardinality and explicit expansion coverage",evidenceCeiling:"Complete current source for every materialized syntax unit; bounded selector and packet coverage remain explicit.",nonClaim:"A source packet does not choose which implementation details are relevant to the user task. A reference mention does not establish executable reachability.",outputCost:"potentially-large",contrasts:["code: inspect batches bounded behavior or source gaps; code materializes complete exact source.","evidence: inspect reads implementation units; evidence projects typed relationships without source."],gapClosingCommands:[]},{stage:"read",id:"code",command:"code <selectors...>",question:"What exact source defines these symbols, ranges, or file surfaces?",requiredInput:"One or more exact symbols, file:line ranges, or file paths.",returnedFact:"per-selector resolution, complete definition source, exact ranges with statically attributed same-file call closure, file export surfaces, omitted-local ledgers, and line ranges",evidenceCeiling:"Exact current source bytes for every resolved selector, with omitted file-local constructs disclosed.",nonClaim:"Source materialization does not establish callers, runtime reachability, or task relevance by itself.",outputCost:"potentially-large",contrasts:["inspect: code materializes complete exact source; inspect batches bounded behavior or source gaps.","outline: code reads selected implementations; outline enumerates file structure without reading every body."],gapClosingCommands:[]}];var g="<!-- codebaseiq:agent-setup:begin -->",R="<!-- codebaseiq:agent-setup:end -->",vn="# codebaseiq:agent-setup",X=[".codex/hooks.json",".claude/settings.local.json"],pt="# codebaseiq:local-agent-hooks:begin",ht="# codebaseiq:local-agent-hooks:end",we="hook-architecture-stop",kt=["claude","codex"],P={claude:".claude/settings.local.json",codex:".codex/hooks.json"},St="sentinel-hook.mjs",kn=l("dist","sentinel-hook.js"),Sn=l("dist","cli.js"),bn="cli-path",xn="installed-projects.json";function Yr(e){let t=e.written.length+e.unchanged.length,n=e.skipped.length;return{verdict:n===0?"ready":t===0?"blocked":"partial",ready:t,skipped:n}}function Zr(e,t={}){let n={written:[],unchanged:[],skipped:[]};return wn(e,n),t.architectureHook!==!1&&En(e,n,t.architectureHook),n}function eo(e,t={}){let n={removed:[],unchanged:[],skipped:[]};return mt(e,"AGENTS.md",t,n),mt(e,"CLAUDE.md",t,n),xt(e,t,n,r=>Ot(Wn(r))),qt(e,t,n),An(e,t,n),n}function wn(e,t){let n=[g,"## codebaseiq","","This repository uses codebaseiq as its primary code exploration surface.","","codebaseiq separates two responsibilities: the agent decides what repository fact it needs, while the tool locates exact referents and reports compiler, runtime, data, state, temporal, contract, identity, ownership, and dependency evidence without guessing task relevance. The ordinary loop is locate an exact root, project explicitly chosen relationships, read behavior only for a named remaining gap, then stop when the requested claims are established.","","- Use codebaseiq for repository exploration, including literal search and exact source reads. Native tools are for applying edits, running checks, binary content, or a specific unsupported gap that codebaseiq has explicitly reported\u2014not a parallel exploration workflow.","- Before exploring, state the few material repository facts the answer depends on. Include behavior-changing predicates, authorization checks, data reshaping, hard bounds, runtime crossings, durable state changes, emitted notifications, returned values, relevant sibling outcomes, and externally visible ordering only when the request depends on them.","- For end-to-end explanations, use the installed codebaseiq-explore guidance to maintain the evidence ledger and audit the final answer; codebaseiq supplies the repository observations.",...ut,"- Any exact symbol or `file:line` returned by a locator is immediately usable as a graph root. There is no required anchor-discovery phase and locator ordering never proves task relevance. For an end-to-end question, include the initiating owner as a root or request incoming execution capable of exposing it; do not assume a core type is the ingress. Locate independent roots together when the question already implies several participants.","- A materialized evidence projection requires repeated `--symbol`, `--at`, or `--search` selectors plus one or more repeated `--edge <family>` flags, explicit `--direction incoming|outgoing|both`, `--depth <n>`, and `--max-edges <n>`. The agent chooses the relationships capable of establishing its claim; the CLI resolves identity, direction, evidence strength, provider support, and coverage. Use optional exact `--subtype <subtype>` and `--connecting` only when the selected roots themselves must be connected. Never request `complete`, `all`, or every family merely to discover what exists; use `--inventory-only` when only counts can determine the next bounded projection.","- Treat execution calls and exact runtime handoffs as executable reachability. Dataflow, state, temporal, contract, identity, ownership, and dependency edges say what a path carries, changes, orders, constrains, identifies, contains, or relies on; they do not become call claims. Treat exact edges as facts only within their stated coverage and candidate edges as leads requiring source confirmation.","- Read every packet as a coverage contract. `accounted` means the requested bounded projection reports every omission; `bounded` means requested edges were placed in stable recoverable folds by the output budget; `incomplete` means a selector or provider could not be resolved. None proves the user task complete, and missing output is no evidence of absence.","- Prefer batched locators, projections, and gap reads. Query count measures exploration efficiency; it never makes a known recoverable material fact optional. Before drilling down, name the still-missing fact. 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