codealmanac 0.1.8 → 0.1.9

package/dist/{chunk-73A5TGBC.js → chunk-QLHJP2XK.js}

@@ -420,7 +420,7 @@ async function runDoctor(options) {
 }
 async function safeGatherWikiChecks(options) {
   try {
-    const { gatherWikiChecks } = await import("./wiki-EHZ7LG7R.js");
+    const { gatherWikiChecks } = await import("./wiki-IPSRRGOT.js");
     return await gatherWikiChecks(options);
   } catch (err) {
     const msg = err instanceof Error ? err.message : String(err);
@@ -438,4 +438,4 @@ async function safeGatherWikiChecks(options) {
 export {
   runDoctor
 };
-//# sourceMappingURL=chunk-73A5TGBC.js.map
+//# sourceMappingURL=chunk-QLHJP2XK.js.map

package/dist/{cli-HIXXCUSQ.js → cli-W3OYVJYH.js}

@@ -270,7 +270,7 @@ async function run(argv, deps = {}) {
   if (await tryRunSqliteFreeCommand(argv.slice(2), runSetupFn)) {
     return;
   }
-  const { registerCommands } = await import("./register-commands-JAPO3AUB.js");
+  const { registerCommands } = await import("./register-commands-JHC2OFKM.js");
   registerCommands(program);
   configureGroupedHelp(program);
   await program.parseAsync(argv);
@@ -341,7 +341,7 @@ async function tryRunSqliteFreeCommand(args, runSetupFn) {
     return true;
   }
   if (command === "doctor") {
-    const { runDoctor } = await import("./doctor-IS6N7V63.js");
+    const { runDoctor } = await import("./doctor-ODFNJUKH.js");
     emit(await runDoctor({
       cwd: process.cwd(),
       ...parseDoctorFlags(args.slice(1))
@@ -390,4 +390,4 @@ export {
   run,
   tryParseSetupShortcut
 };
-//# sourceMappingURL=cli-HIXXCUSQ.js.map
+//# sourceMappingURL=cli-W3OYVJYH.js.map

package/dist/codealmanac.js

@@ -59,7 +59,7 @@ if (shouldCheckSqliteAbi(process.argv)) {
     process.exit(1);
   }
 }
-var { run } = await import("./cli-HIXXCUSQ.js");
+var { run } = await import("./cli-W3OYVJYH.js");
 run(process.argv).catch((err) => {
   const message = err instanceof Error ? err.message : String(err);
   process.stderr.write(`almanac: ${message}

package/dist/{doctor-IS6N7V63.js → doctor-ODFNJUKH.js}

@@ -1,7 +1,7 @@
 #!/usr/bin/env node
 import {
   runDoctor
-} from "./chunk-73A5TGBC.js";
+} from "./chunk-QLHJP2XK.js";
 import "./chunk-4CODZRHH.js";
 import "./chunk-QHQ6YH7U.js";
 import "./chunk-FM3VRDK7.js";
@@ -12,4 +12,4 @@ import "./chunk-7JUX4ADQ.js";
 export {
   runDoctor
 };
-//# sourceMappingURL=doctor-IS6N7V63.js.map
+//# sourceMappingURL=doctor-ODFNJUKH.js.map

package/dist/{register-commands-JAPO3AUB.js → register-commands-JHC2OFKM.js}

@@ -24,7 +24,7 @@ import {
 } from "./chunk-3C5SY5SE.js";
 import {
   runDoctor
-} from "./chunk-73A5TGBC.js";
+} from "./chunk-QLHJP2XK.js";
 import "./chunk-4CODZRHH.js";
 import {
   runUninstall
@@ -1819,7 +1819,7 @@ function registerSetupCommands(program) {
 
 // src/commands/bootstrap.ts
 import { createWriteStream, existsSync as existsSync5 } from "fs";
-import { readdir } from "fs/promises";
+import { mkdir as mkdir2, readdir } from "fs/promises";
 import { join as join6, relative } from "path";
 
 // src/agent/prompts.ts
@@ -1882,6 +1882,10 @@ async function runAgent(opts) {
       model: opts.model ?? "claude-sonnet-4-6",
       maxTurns: opts.maxTurns ?? 100,
       ...claudeExecutable !== void 0 ? { pathToClaudeCodeExecutable: claudeExecutable } : {},
+      env: {
+        ...process.env,
+        CODEALMANAC_INTERNAL_SESSION: "1"
+      },
       // REQUIRED for streaming text deltas. Without it, `stream_event`
       // messages never fire and the CLI has no progress visibility during
       // long turns. See docs/research/agent-sdk.md §12 pitfall #1.
@@ -1960,10 +1964,10 @@ async function ensureGitignoreHasIndexDb(cwd) {
     ".almanac/index.db",
     ".almanac/index.db-wal",
     ".almanac/index.db-shm",
-    // Capture/bootstrap/ingest log files written by the AI pipeline.
-    // These can be multi-megabyte JSONL files and should never be
-    // committed. Bug #4 from codealmanac-known-bugs.md: a 1.8MB bootstrap
-    // log was accidentally committed before this line was added.
+    // Runtime logs written by the AI pipeline. These can be multi-megabyte
+    // JSONL files and should never be committed. Keep the old root-level
+    // globs too so repos initialized by earlier releases stay quiet.
+    ".almanac/logs/",
     ".almanac/.capture-*",
     ".almanac/.bootstrap-*",
     ".almanac/.ingest-*"
@@ -2105,8 +2109,10 @@ async function runBootstrap(options) {
   }
   const systemPrompt = await loadPrompt("bootstrap");
   const now = options.now?.() ?? /* @__PURE__ */ new Date();
+  const logsDir = join6(almanacDir, "logs");
+  await mkdir2(logsDir, { recursive: true });
   const logName = `.bootstrap-${formatTimestamp(now)}.log`;
-  const logPath = join6(almanacDir, logName);
+  const logPath = join6(logsDir, logName);
   const logStream = createWriteStream(logPath, { flags: "w" });
   const out = process.stdout;
   const formatter = new StreamingFormatter({
@@ -2294,7 +2300,7 @@ import {
   existsSync as existsSync6,
   statSync
 } from "fs";
-import { readFile as readFile6, readdir as readdir2, stat } from "fs/promises";
+import { mkdir as mkdir3, readFile as readFile6, readdir as readdir2, stat } from "fs/promises";
 import { homedir } from "os";
 import { basename as basename3, join as join7, relative as relative2 } from "path";
 var WRITER_TOOLS = ["Read", "Write", "Edit", "Glob", "Grep", "Bash", "Agent"];
@@ -2349,8 +2355,10 @@ async function runCapture(options) {
   };
   const now = options.now?.() ?? /* @__PURE__ */ new Date();
   const logStem = options.sessionId !== void 0 && options.sessionId.length > 0 ? options.sessionId : formatTimestamp2(now);
+  const logsDir = join7(almanacDir, "logs");
+  await mkdir3(logsDir, { recursive: true });
   const logName = `.capture-${logStem}.jsonl`;
-  const logPath = join7(almanacDir, logName);
+  const logPath = join7(logsDir, logName);
   const logStream = createWriteStream2(logPath, { flags: "w" });
   const out = process.stdout;
   const formatter = new StreamingFormatter({
@@ -2644,4 +2652,4 @@ function registerCommands(program) {
 export {
   registerCommands
 };
-//# sourceMappingURL=register-commands-JAPO3AUB.js.map
+//# sourceMappingURL=register-commands-JHC2OFKM.js.map