code-auditor-mcp 3.1.0 → 3.4.0

package/dist/conventions/conventionMiner.js.map

@@ -0,0 +1 @@
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package/dist/coverage/coverageService.d.ts

@@ -0,0 +1,49 @@
+/**
+ * Coverage import service — Spec 15 R4.
+ *
+ * Orchestrates importing coverage data from lcov .info or Istanbul JSON files,
+ * auto-detecting the format and storing results in the CodeIndexDB.
+ */
+export type CoverageFormat = 'lcov' | 'istanbul';
+export interface ImportResult {
+    format: CoverageFormat;
+    filesImported: number;
+    entriesImported: number;
+    basis: 'measured';
+    source: string;
+}
+/**
+ * Detect the coverage format from file content.
+ * LCOV files start with "TN:" — Istanbul files are JSON.
+ */
+export declare function detectFormat(content: string): CoverageFormat;
+/**
+ * Import a coverage file into the CodeIndexDB.
+ *
+ * @param filePath - Path to the coverage file (.info or .json)
+ * @param projectRoot - Project root for resolving relative paths
+ * @returns Import statistics
+ */
+export declare function importCoverageFile(filePath: string, projectRoot: string): Promise<ImportResult>;
+/**
+ * Generate a coverage report from the DB.
+ */
+export declare function generateCoverageReport(): Promise<{
+    totalFunctions: number;
+    coveredFunctions: number;
+    coverageRate: number;
+    byRiskDecile: Array<{
+        decile: number;
+        covered: number;
+        total: number;
+        rate: number;
+    }>;
+    untestedTopDecile: Array<{
+        functionName: string;
+        filePath: string;
+        riskScore: number;
+        basis: string;
+    }>;
+    staleImport: boolean;
+}>;
+//# sourceMappingURL=coverageService.d.ts.map

package/dist/coverage/coverageService.d.ts.map

@@ -0,0 +1 @@
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package/dist/coverage/coverageService.js

@@ -0,0 +1,117 @@
+/**
+ * Coverage import service — Spec 15 R4.
+ *
+ * Orchestrates importing coverage data from lcov .info or Istanbul JSON files,
+ * auto-detecting the format and storing results in the CodeIndexDB.
+ */
+import * as fs from 'node:fs/promises';
+import * as path from 'node:path';
+import { CodeIndexDB } from '../codeIndexDB.js';
+import { parseLcov, lcovToLineCoverage } from './lcovParser.js';
+import { parseIstanbul, istanbulToLineCoverage } from './istanbulParser.js';
+/**
+ * Detect the coverage format from file content.
+ * LCOV files start with "TN:" — Istanbul files are JSON.
+ */
+export function detectFormat(content) {
+    const trimmed = content.trim();
+    if (trimmed.startsWith('TN:') || trimmed.startsWith('SF:')) {
+        return 'lcov';
+    }
+    return 'istanbul';
+}
+/**
+ * Import a coverage file into the CodeIndexDB.
+ *
+ * @param filePath - Path to the coverage file (.info or .json)
+ * @param projectRoot - Project root for resolving relative paths
+ * @returns Import statistics
+ */
+export async function importCoverageFile(filePath, projectRoot) {
+    const raw = await fs.readFile(filePath, 'utf-8');
+    const format = detectFormat(raw);
+    let lineCoverage;
+    let filesImported;
+    if (format === 'lcov') {
+        const entries = parseLcov(raw);
+        lineCoverage = lcovToLineCoverage(entries);
+        filesImported = new Set(entries.map((e) => e.sourceFile).filter(Boolean)).size;
+    }
+    else {
+        const parsed = parseIstanbul(raw);
+        lineCoverage = istanbulToLineCoverage(parsed);
+        filesImported = parsed.length;
+    }
+    // Query all indexed functions from the DB and match against coverage
+    const db = CodeIndexDB.getInstance();
+    await db.initialize();
+    const allFunctions = db.rawDb
+        .prepare(`SELECT id, name, file_path, line_number, is_exported FROM functions
+       WHERE language IN ('typescript', 'javascript', 'go')`)
+        .all();
+    const entries = [];
+    const absoluteProjectRoot = path.resolve(projectRoot);
+    for (const fn of allFunctions) {
+        let covered = false;
+        // Try matching by absolute path and relative-path variants
+        for (const [covFilePath, coveredLines] of lineCoverage) {
+            const absPath = normalizePath(path.resolve(absoluteProjectRoot, covFilePath));
+            const fnAbsPath = normalizePath(path.resolve(absoluteProjectRoot, fn.file_path));
+            if (absPath === fnAbsPath || covFilePath === fn.file_path) {
+                covered = coveredLines.has(fn.line_number);
+                break;
+            }
+        }
+        entries.push({
+            functionName: fn.name,
+            filePath: fn.file_path,
+            lineNumber: fn.line_number,
+            basis: 'measured',
+            covered,
+            source: filePath,
+        });
+    }
+    const entriesImported = entries.filter((e) => e.covered).length;
+    db.importCoverageData(entries);
+    return {
+        format,
+        filesImported,
+        entriesImported,
+        basis: 'measured',
+        source: filePath,
+    };
+}
+/**
+ * Generate a coverage report from the DB.
+ */
+export async function generateCoverageReport() {
+    const db = CodeIndexDB.getInstance();
+    await db.initialize();
+    const byRiskDecile = db.getCoverageByRiskDecile(10);
+    const untestedTopDecile = db.getUntestedTopDecile(0.1);
+    const staleImport = db.isCoverageStale();
+    // Overall stats
+    const totalResult = db.rawDb
+        .prepare('SELECT COUNT(*) as cnt FROM functions')
+        .get();
+    const coveredResult = db.rawDb
+        .prepare(`SELECT COUNT(DISTINCT function_name || ':' || file_path) as cnt
+       FROM coverage_data WHERE covered = 1`)
+        .get();
+    const totalFunctions = totalResult.cnt;
+    const coveredFunctions = coveredResult.cnt;
+    const coverageRate = totalFunctions > 0 ? coveredFunctions / totalFunctions : 0;
+    return {
+        totalFunctions,
+        coveredFunctions,
+        coverageRate,
+        byRiskDecile,
+        untestedTopDecile,
+        staleImport,
+    };
+}
+// ── Helpers ──────────────────────────────────────────────────────────────
+function normalizePath(p) {
+    return p.replace(/\\/g, '/').replace(/\/+$/, '');
+}
+//# sourceMappingURL=coverageService.js.map

package/dist/coverage/coverageService.js.map

@@ -0,0 +1 @@
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package/dist/coverage/istanbulParser.d.ts

@@ -0,0 +1,84 @@
+/**
+ * Istanbul (JSON) coverage parser — Spec 15 R4.
+ *
+ * Parses Istanbul/nyc JSON coverage output. The format is a map of
+ * file paths → coverage data objects with statementMap, fnMap, and hit counts.
+ *
+ * Format reference: https://github.com/istanbuljs/istanbuljs
+ */
+export interface IstanbulCoverage {
+    [filePath: string]: {
+        path: string;
+        statementMap: Record<string, {
+            start: {
+                line: number;
+                column: number;
+            };
+            end: {
+                line: number;
+                column: number;
+            };
+        }>;
+        fnMap: Record<string, {
+            name: string;
+            decl: {
+                start: {
+                    line: number;
+                    column: number;
+                };
+                end: {
+                    line: number;
+                    column: number;
+                };
+            };
+            loc: {
+                start: {
+                    line: number;
+                    column: number;
+                };
+                end: {
+                    line: number;
+                    column: number;
+                };
+            };
+            line?: number;
+        }>;
+        branchMap: Record<string, unknown>;
+        /** Statement hit counts: statementId → execution count */
+        s: Record<string, number>;
+        /** Function hit counts: functionId → execution count */
+        f: Record<string, number>;
+        /** Branch hit counts */
+        b: Record<string, number[]>;
+        /** Full path to the source file */
+        [key: string]: unknown;
+    };
+}
+interface ParsedFile {
+    sourceFile: string;
+    /** Set of covered line numbers (statement hit count > 0) */
+    coveredLines: Set<number>;
+    /** Map of function name → { line, hitCount } */
+    functions: Map<string, {
+        line: number;
+        hitCount: number;
+    }>;
+    /** Total statements */
+    totalStatements: number;
+    /** Covered statements */
+    coveredStatements: number;
+}
+/**
+ * Parse Istanbul JSON coverage data string.
+ */
+export declare function parseIstanbul(content: string): ParsedFile[];
+/**
+ * Convert Istanbul parsed files to a file → covered lines map.
+ */
+export declare function istanbulToLineCoverage(files: ParsedFile[]): Map<string, Set<number>>;
+/**
+ * Convert Istanbul parsed files to a file → covered function names map.
+ */
+export declare function istanbulToFunctionCoverage(files: ParsedFile[]): Map<string, Set<string>>;
+export {};
+//# sourceMappingURL=istanbulParser.d.ts.map

package/dist/coverage/istanbulParser.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"istanbulParser.d.ts","sourceRoot":"","sources":["../../src/coverage/istanbulParser.ts"],"names":[],"mappings":"AAAA;;;;;;;GAOG;AAEH,MAAM,WAAW,gBAAgB;IAC/B,CAAC,QAAQ,EAAE,MAAM,GAAG;QAClB,IAAI,EAAE,MAAM,CAAC;QACb,YAAY,EAAE,MAAM,CAAC,MAAM,EAAE;YAC3B,KAAK,EAAE;gBAAE,IAAI,EAAE,MAAM,CAAC;gBAAC,MAAM,EAAE,MAAM,CAAA;aAAE,CAAC;YACxC,GAAG,EAAE;gBAAE,IAAI,EAAE,MAAM,CAAC;gBAAC,MAAM,EAAE,MAAM,CAAA;aAAE,CAAC;SACvC,CAAC,CAAC;QACH,KAAK,EAAE,MAAM,CAAC,MAAM,EAAE;YACpB,IAAI,EAAE,MAAM,CAAC;YACb,IAAI,EAAE;gBAAE,KAAK,EAAE;oBAAE,IAAI,EAAE,MAAM,CAAC;oBAAC,MAAM,EAAE,MAAM,CAAA;iBAAE,CAAC;gBAAC,GAAG,EAAE;oBAAE,IAAI,EAAE,MAAM,CAAC;oBAAC,MAAM,EAAE,MAAM,CAAA;iBAAE,CAAA;aAAE,CAAC;YACzF,GAAG,EAAE;gBAAE,KAAK,EAAE;oBAAE,IAAI,EAAE,MAAM,CAAC;oBAAC,MAAM,EAAE,MAAM,CAAA;iBAAE,CAAC;gBAAC,GAAG,EAAE;oBAAE,IAAI,EAAE,MAAM,CAAC;oBAAC,MAAM,EAAE,MAAM,CAAA;iBAAE,CAAA;aAAE,CAAC;YACxF,IAAI,CAAC,EAAE,MAAM,CAAC;SACf,CAAC,CAAC;QACH,SAAS,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,CAAC;QACnC,0DAA0D;QAC1D,CAAC,EAAE,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,CAAC;QAC1B,wDAAwD;QACxD,CAAC,EAAE,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,CAAC;QAC1B,wBAAwB;QACxB,CAAC,EAAE,MAAM,CAAC,MAAM,EAAE,MAAM,EAAE,CAAC,CAAC;QAC5B,mCAAmC;QACnC,CAAC,GAAG,EAAE,MAAM,GAAG,OAAO,CAAC;KACxB,CAAC;CACH;AAED,UAAU,UAAU;IAClB,UAAU,EAAE,MAAM,CAAC;IACnB,4DAA4D;IAC5D,YAAY,EAAE,GAAG,CAAC,MAAM,CAAC,CAAC;IAC1B,gDAAgD;IAChD,SAAS,EAAE,GAAG,CAAC,MAAM,EAAE;QAAE,IAAI,EAAE,MAAM,CAAC;QAAC,QAAQ,EAAE,MAAM,CAAA;KAAE,CAAC,CAAC;IAC3D,uBAAuB;IACvB,eAAe,EAAE,MAAM,CAAC;IACxB,yBAAyB;IACzB,iBAAiB,EAAE,MAAM,CAAC;CAC3B;AAED;;GAEG;AACH,wBAAgB,aAAa,CAAC,OAAO,EAAE,MAAM,GAAG,UAAU,EAAE,CAuE3D;AAgCD;;GAEG;AACH,wBAAgB,sBAAsB,CAAC,KAAK,EAAE,UAAU,EAAE,GAAG,GAAG,CAAC,MAAM,EAAE,GAAG,CAAC,MAAM,CAAC,CAAC,CAMpF;AAED;;GAEG;AACH,wBAAgB,0BAA0B,CAAC,KAAK,EAAE,UAAU,EAAE,GAAG,GAAG,CAAC,MAAM,EAAE,GAAG,CAAC,MAAM,CAAC,CAAC,CAUxF"}

package/dist/coverage/istanbulParser.js

@@ -0,0 +1,120 @@
+/**
+ * Istanbul (JSON) coverage parser — Spec 15 R4.
+ *
+ * Parses Istanbul/nyc JSON coverage output. The format is a map of
+ * file paths → coverage data objects with statementMap, fnMap, and hit counts.
+ *
+ * Format reference: https://github.com/istanbuljs/istanbuljs
+ */
+/**
+ * Parse Istanbul JSON coverage data string.
+ */
+export function parseIstanbul(content) {
+    const raw = JSON.parse(content);
+    // Istanbul output can be a top-level map of file → data, or wrapped in
+    // an object with a `coverage` or individual file keys.
+    const data = extractCoverageMap(raw);
+    if (!data)
+        return [];
+    const results = [];
+    for (const [filePath, fileData] of Object.entries(data)) {
+        if (!fileData || typeof fileData !== 'object')
+            continue;
+        const fd = fileData;
+        // Use `path` field if available, otherwise use the key
+        const sourceFile = typeof fd.path === 'string' ? fd.path : filePath;
+        const coveredLines = new Set();
+        const functions = new Map();
+        // Build line coverage from statements
+        const stmtMap = fd.statementMap;
+        const s = fd.s;
+        if (stmtMap && s) {
+            for (const [stmtId, loc] of Object.entries(stmtMap)) {
+                const hitCount = s[stmtId] ?? 0;
+                if (hitCount > 0 && loc?.start?.line) {
+                    coveredLines.add(loc.start.line);
+                }
+            }
+        }
+        // Build function coverage
+        const fnMap = fd.fnMap;
+        const f = fd.f;
+        if (fnMap && f) {
+            for (const [fnId, fnData] of Object.entries(fnMap)) {
+                if (!fnData || typeof fnData !== 'object')
+                    continue;
+                const hitCount = f[fnId] ?? 0;
+                const line = fnData.line ??
+                    fnData.decl?.start?.line ??
+                    fnData.loc?.start?.line ??
+                    0;
+                if (fnData.name) {
+                    functions.set(fnData.name, { line, hitCount });
+                }
+            }
+        }
+        const totalStatements = stmtMap ? Object.keys(stmtMap).length : 0;
+        const coveredStatements = s
+            ? Object.values(s).filter((c) => c > 0).length
+            : 0;
+        results.push({
+            sourceFile,
+            coveredLines,
+            functions,
+            totalStatements,
+            coveredStatements,
+        });
+    }
+    return results;
+}
+/**
+ * Extract the coverage data map from a raw Istanbul JSON value.
+ * Handles different wrapper formats.
+ */
+function extractCoverageMap(raw) {
+    if (raw === null || raw === undefined || typeof raw !== 'object')
+        return null;
+    const obj = raw;
+    // Direct map of filePath → coverage data (most common)
+    // Check if any value has a `statementMap` field
+    for (const val of Object.values(obj)) {
+        if (val && typeof val === 'object' && 'statementMap' in val) {
+            return obj;
+        }
+    }
+    // "istanbul" key (older format)
+    if ('istanbul' in obj) {
+        return extractCoverageMap(obj.istanbul);
+    }
+    // "coverage" or "coverageMap" key
+    if ('coverage' in obj) {
+        return extractCoverageMap(obj.coverage);
+    }
+    return null;
+}
+/**
+ * Convert Istanbul parsed files to a file → covered lines map.
+ */
+export function istanbulToLineCoverage(files) {
+    const map = new Map();
+    for (const f of files) {
+        map.set(f.sourceFile, f.coveredLines);
+    }
+    return map;
+}
+/**
+ * Convert Istanbul parsed files to a file → covered function names map.
+ */
+export function istanbulToFunctionCoverage(files) {
+    const map = new Map();
+    for (const f of files) {
+        const covered = new Set();
+        for (const [fnName, { hitCount }] of f.functions) {
+            if (hitCount > 0)
+                covered.add(fnName);
+        }
+        map.set(f.sourceFile, covered);
+    }
+    return map;
+}
+//# sourceMappingURL=istanbulParser.js.map

package/dist/coverage/istanbulParser.js.map

@@ -0,0 +1 @@
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package/dist/coverage/lcovParser.d.ts

@@ -0,0 +1,40 @@
+/**
+ * LCOV (.info) coverage parser — Spec 15 R4.
+ *
+ * Parses LCOV tracefiles produced by Istanbul/nyc, c8, and similar tools.
+ * Extracts per-file, per-line, and per-function coverage data.
+ *
+ * Format reference: https://ltp.sourceforge.net/coverage/lcov/geninfo.1.php
+ */
+export interface LcovEntry {
+    /** Source file path (SF:) */
+    sourceFile: string;
+    /** Array of [lineNumber, executionCount] tuples (DA:) */
+    lines: Array<[number, number]>;
+    /** Map of function name → [line, hitCount] (FN: + FNDA:) */
+    functions: Map<string, {
+        line: number;
+        hitCount: number;
+    }>;
+    /** Lines found (LF:) */
+    linesFound: number;
+    /** Lines hit (LH:) */
+    linesHit: number;
+    /** Test name (TN:) */
+    testName?: string;
+}
+/**
+ * Parse an LCOV .info file string into structured entries.
+ * One entry per `end_of_record` delimited record.
+ */
+export declare function parseLcov(content: string): LcovEntry[];
+/**
+ * Convert LCOV entries to a flat coverage map:
+ * sourceFile → Set of covered line numbers.
+ */
+export declare function lcovToLineCoverage(entries: LcovEntry[]): Map<string, Set<number>>;
+/**
+ * Convert LCOV entries to a flat set of covered function names per file.
+ */
+export declare function lcovToFunctionCoverage(entries: LcovEntry[]): Map<string, Set<string>>;
+//# sourceMappingURL=lcovParser.d.ts.map

package/dist/coverage/lcovParser.d.ts.map

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package/dist/coverage/lcovParser.js

@@ -0,0 +1,168 @@
+/**
+ * LCOV (.info) coverage parser — Spec 15 R4.
+ *
+ * Parses LCOV tracefiles produced by Istanbul/nyc, c8, and similar tools.
+ * Extracts per-file, per-line, and per-function coverage data.
+ *
+ * Format reference: https://ltp.sourceforge.net/coverage/lcov/geninfo.1.php
+ */
+/**
+ * Parse an LCOV .info file string into structured entries.
+ * One entry per `end_of_record` delimited record.
+ */
+export function parseLcov(content) {
+    const entries = [];
+    let current = null;
+    /** Pending FN: entries waiting for their FNDA: match in subsequent lines. */
+    let pendingFns = new Map(); // name → line
+    let pendingTestName;
+    for (const line of content.split('\n')) {
+        const trimmed = line.trim();
+        if (trimmed === '' || trimmed === 'end_of_record') {
+            if (trimmed === 'end_of_record' && current) {
+                current = null;
+                pendingFns = new Map();
+                pendingTestName = undefined;
+            }
+            continue;
+        }
+        const colonIdx = trimmed.indexOf(':');
+        if (colonIdx < 0)
+            continue;
+        const tag = trimmed.substring(0, colonIdx);
+        const value = trimmed.substring(colonIdx + 1);
+        switch (tag) {
+            case 'TN':
+                // Record test name — applied to the next SF or existing current entry
+                pendingTestName = value;
+                if (!current) {
+                    current = createEmptyEntry();
+                }
+                current.testName = value;
+                break;
+            case 'SF':
+                // New source file — start a fresh record
+                current = createEmptyEntry();
+                current.sourceFile = value;
+                if (pendingTestName) {
+                    current.testName = pendingTestName;
+                    pendingTestName = undefined;
+                }
+                entries.push(current);
+                break;
+            case 'DA': {
+                if (!current)
+                    break;
+                const [lineNum, count] = value.split(',').map(Number);
+                if (!isNaN(lineNum) && !isNaN(count)) {
+                    current.lines.push([lineNum, count]);
+                }
+                break;
+            }
+            case 'LF':
+                if (current)
+                    current.linesFound = parseInt(value, 10) || 0;
+                break;
+            case 'LH':
+                if (current)
+                    current.linesHit = parseInt(value, 10) || 0;
+                break;
+            case 'FN': {
+                if (!current)
+                    break;
+                const [lineNum, fnName] = splitComma(value);
+                if (lineNum !== null && fnName) {
+                    pendingFns.set(fnName, lineNum);
+                }
+                break;
+            }
+            case 'FNDA': {
+                if (!current)
+                    break;
+                const [countStr, fnName] = splitComma(value);
+                const count = countStr ?? NaN;
+                if (fnName && !isNaN(count)) {
+                    const line = pendingFns.get(fnName);
+                    current.functions.set(fnName, {
+                        line: line ?? 0,
+                        hitCount: count,
+                    });
+                }
+                break;
+            }
+            case 'BRDA':
+            case 'BRF':
+            case 'BRH':
+                // Branch coverage — not needed for function-level detection
+                break;
+        }
+    }
+    return entries;
+}
+/**
+ * Convert LCOV entries to a flat coverage map:
+ * sourceFile → Set of covered line numbers.
+ */
+export function lcovToLineCoverage(entries) {
+    const map = new Map();
+    for (const entry of entries) {
+        const covered = new Set();
+        for (const [line, count] of entry.lines) {
+            if (count > 0)
+                covered.add(line);
+        }
+        // Merge with existing (multiple records can cover the same file)
+        const existing = map.get(entry.sourceFile);
+        if (existing) {
+            for (const c of covered)
+                existing.add(c);
+        }
+        else {
+            map.set(entry.sourceFile, covered);
+        }
+    }
+    return map;
+}
+/**
+ * Convert LCOV entries to a flat set of covered function names per file.
+ */
+export function lcovToFunctionCoverage(entries) {
+    const map = new Map();
+    for (const entry of entries) {
+        const covered = new Set();
+        for (const [fnName, { hitCount }] of entry.functions) {
+            if (hitCount > 0)
+                covered.add(fnName);
+        }
+        const existing = map.get(entry.sourceFile);
+        if (existing) {
+            for (const c of covered)
+                existing.add(c);
+        }
+        else {
+            map.set(entry.sourceFile, covered);
+        }
+    }
+    return map;
+}
+// ── Helpers ──────────────────────────────────────────────────────────────
+function createEmptyEntry() {
+    return {
+        sourceFile: '',
+        lines: [],
+        functions: new Map(),
+        linesFound: 0,
+        linesHit: 0,
+    };
+}
+/** Split "123,foo" → [123, "foo"]; handles commas in function names. */
+function splitComma(value) {
+    const idx = value.indexOf(',');
+    if (idx < 0)
+        return [null, null];
+    const first = value.substring(0, idx);
+    const rest = value.substring(idx + 1);
+    const num = parseInt(first, 10);
+    return [isNaN(num) ? null : num, rest || null];
+}
+//# sourceMappingURL=lcovParser.js.map