code-auditor-mcp 1.21.0 → 2.0.0

package/dist/codeIndexDB-enhanced.js

@@ -0,0 +1,488 @@
+/**
+ * Enhanced Code Index Database for Cross-Language Support
+ * Extends the existing CodeIndexDB with multi-language capabilities
+ */
+import * as FlexSearch from 'flexsearch';
+import { CodeIndexDB } from './codeIndexDB.js';
+/**
+ * Enhanced CodeIndexDB with cross-language support
+ * Maintains backward compatibility while adding new capabilities
+ */
+export class EnhancedCodeIndexDB extends CodeIndexDB {
+    // New collections for cross-language support
+    crossLanguageEntitiesCollection = null;
+    crossReferencesCollection = null;
+    apiContractsCollection = null;
+    // Enhanced search index for cross-language entities
+    crossLanguageSearchIndex;
+    migrationCompleted = false;
+    constructor(dbPath = ':memory:') {
+        super(dbPath);
+        // Initialize enhanced FlexSearch for cross-language entities
+        const { Document } = FlexSearch;
+        this.crossLanguageSearchIndex = new Document({
+            document: {
+                id: '$loki',
+                index: [
+                    {
+                        field: 'name',
+                        tokenize: 'full',
+                        optimize: true,
+                        resolution: 9,
+                        bidirectional: true,
+                        weight: 10
+                    },
+                    {
+                        field: 'signature',
+                        tokenize: 'full',
+                        optimize: true,
+                        resolution: 9,
+                        weight: 9
+                    },
+                    {
+                        field: 'purpose',
+                        tokenize: 'full',
+                        optimize: true,
+                        resolution: 9,
+                        weight: 8
+                    },
+                    {
+                        field: 'context',
+                        tokenize: 'full',
+                        optimize: true,
+                        resolution: 9,
+                        weight: 7
+                    },
+                    {
+                        field: 'language',
+                        tokenize: 'full',
+                        optimize: true,
+                        resolution: 9,
+                        weight: 6
+                    },
+                    {
+                        field: 'type',
+                        tokenize: 'full',
+                        optimize: true,
+                        resolution: 9,
+                        weight: 6
+                    },
+                    {
+                        field: 'searchTokens',
+                        tokenize: 'full',
+                        optimize: true,
+                        resolution: 9,
+                        weight: 5
+                    },
+                    {
+                        field: 'file',
+                        tokenize: 'full',
+                        optimize: true,
+                        resolution: 9,
+                        weight: 3
+                    }
+                ]
+            }
+        });
+    }
+    /**
+     * Initialize enhanced collections
+     */
+    async initializeEnhanced() {
+        await this.initialize(); // Initialize base collections first
+        // Initialize cross-language collections
+        this.crossLanguageEntitiesCollection = this.getDatabase().addCollection('crossLanguageEntities', {
+            indices: ['id', 'name', 'language', 'type', 'file'],
+            unique: ['id']
+        });
+        this.crossReferencesCollection = this.getDatabase().addCollection('crossReferences', {
+            indices: ['sourceId', 'targetId', 'sourceLanguage', 'targetLanguage', 'type']
+        });
+        this.apiContractsCollection = this.getDatabase().addCollection('apiContracts', {
+            indices: ['entityId', 'version']
+        });
+        console.log('[EnhancedCodeIndexDB] Cross-language collections initialized');
+    }
+    /**
+     * Migrate existing data to cross-language format
+     */
+    async migrateToEnhanced(options = {
+        preserveExisting: true,
+        enhanceMetadata: true,
+        buildReferences: false,
+        validateContracts: false
+    }) {
+        if (this.migrationCompleted) {
+            console.log('[EnhancedCodeIndexDB] Migration already completed');
+            return;
+        }
+        console.log('[EnhancedCodeIndexDB] Starting migration to enhanced schema...');
+        if (!this.crossLanguageEntitiesCollection) {
+            await this.initializeEnhanced();
+        }
+        const adapter = new DefaultCompatibilityAdapter();
+        // Migrate existing functions
+        const existingFunctions = await this.getAllFunctions();
+        for (const func of existingFunctions) {
+            const entity = adapter.convertFunction(func);
+            await this.addCrossLanguageEntity(entity);
+        }
+        // Migrate existing components (if any)
+        // Note: This assumes components are stored somehow in the base class
+        // Implementation would depend on how components are currently stored
+        console.log(`[EnhancedCodeIndexDB] Migrated ${existingFunctions.length} functions to cross-language format`);
+        this.migrationCompleted = true;
+    }
+    /**
+     * Add a cross-language entity to the index
+     */
+    async addCrossLanguageEntity(entity) {
+        if (!this.crossLanguageEntitiesCollection) {
+            await this.initializeEnhanced();
+        }
+        // Ensure required fields
+        const enhancedEntity = {
+            ...entity,
+            id: entity.id || this.generateEntityId(entity),
+            searchTokens: entity.searchTokens || this.generateSearchTokens(entity),
+            createdAt: new Date(),
+            updatedAt: new Date()
+        };
+        // Check for existing entity
+        const existing = this.crossLanguageEntitiesCollection.findOne({ id: enhancedEntity.id });
+        if (existing) {
+            // Update existing
+            Object.assign(existing, enhancedEntity);
+            existing.updatedAt = new Date();
+            this.crossLanguageEntitiesCollection.update(existing);
+        }
+        else {
+            // Add new
+            this.crossLanguageEntitiesCollection.insert(enhancedEntity);
+        }
+        // Update search index
+        this.crossLanguageSearchIndex.add(enhancedEntity);
+    }
+    /**
+     * Add cross-reference between entities
+     */
+    async addCrossReference(reference) {
+        if (!this.crossReferencesCollection) {
+            await this.initializeEnhanced();
+        }
+        const refDoc = {
+            ...reference,
+            createdAt: new Date(),
+            updatedAt: new Date()
+        };
+        this.crossReferencesCollection.insert(refDoc);
+    }
+    /**
+     * Add API contract for an entity
+     */
+    async addAPIContract(entityId, contract) {
+        if (!this.apiContractsCollection) {
+            await this.initializeEnhanced();
+        }
+        const contractDoc = {
+            ...contract,
+            entityId,
+            createdAt: new Date(),
+            updatedAt: new Date()
+        };
+        // Remove existing contract for this entity
+        this.apiContractsCollection.removeWhere({ entityId });
+        // Add new contract
+        this.apiContractsCollection.insert(contractDoc);
+    }
+    /**
+     * Search cross-language entities
+     */
+    async searchCrossLanguage(query, options = {}) {
+        if (!this.crossLanguageEntitiesCollection) {
+            await this.initializeEnhanced();
+        }
+        // Perform FlexSearch
+        const searchResults = this.crossLanguageSearchIndex.search(query, {
+            limit: 50,
+            enrich: true
+        });
+        const results = [];
+        for (const result of searchResults) {
+            for (const doc of result.result) {
+                const entity = this.crossLanguageEntitiesCollection.get(doc.id);
+                if (!entity)
+                    continue;
+                // Apply filters
+                if (options.languages && !options.languages.includes(entity.language))
+                    continue;
+                if (options.types && !options.types.includes(entity.type))
+                    continue;
+                const searchResult = {
+                    entity,
+                    score: 1.0, // FlexSearch doesn't provide scores directly
+                    matches: [result.field] // Field that matched
+                };
+                // Include references if requested
+                if (options.includeReferences) {
+                    searchResult.references = this.crossReferencesCollection.find({
+                        $or: [
+                            { sourceId: entity.id },
+                            { targetId: entity.id }
+                        ]
+                    });
+                }
+                // Include contracts if requested
+                if (options.includeContracts) {
+                    searchResult.contracts = this.apiContractsCollection.find({ entityId: entity.id });
+                }
+                results.push(searchResult);
+            }
+        }
+        return results;
+    }
+    /**
+     * Find entity by ID
+     */
+    async findEntityById(id) {
+        if (!this.crossLanguageEntitiesCollection) {
+            await this.initializeEnhanced();
+        }
+        return this.crossLanguageEntitiesCollection.findOne({ id }) || null;
+    }
+    /**
+     * Find entities by language
+     */
+    async findEntitiesByLanguage(language) {
+        if (!this.crossLanguageEntitiesCollection) {
+            await this.initializeEnhanced();
+        }
+        return this.crossLanguageEntitiesCollection.find({ language });
+    }
+    /**
+     * Find entities by type
+     */
+    async findEntitiesByType(type) {
+        if (!this.crossLanguageEntitiesCollection) {
+            await this.initializeEnhanced();
+        }
+        return this.crossLanguageEntitiesCollection.find({ type });
+    }
+    /**
+     * Get cross-references for an entity
+     */
+    async getCrossReferences(entityId) {
+        if (!this.crossReferencesCollection) {
+            await this.initializeEnhanced();
+        }
+        return this.crossReferencesCollection.find({
+            $or: [
+                { sourceId: entityId },
+                { targetId: entityId }
+            ]
+        });
+    }
+    /**
+     * Generate dependency graph
+     */
+    async generateDependencyGraph(languages) {
+        if (!this.crossLanguageEntitiesCollection || !this.crossReferencesCollection) {
+            await this.initializeEnhanced();
+        }
+        const entities = languages
+            ? this.crossLanguageEntitiesCollection.find({ language: { $in: languages } })
+            : this.crossLanguageEntitiesCollection.find();
+        const references = this.crossReferencesCollection.find();
+        const nodes = entities.map(entity => ({
+            id: entity.id,
+            name: entity.name,
+            language: entity.language,
+            type: entity.type,
+            file: entity.file,
+            weight: entity.complexity || 1
+        }));
+        const edges = references.map(ref => ({
+            from: ref.sourceId,
+            to: ref.targetId,
+            type: ref.type,
+            weight: ref.confidence,
+            protocol: ref.protocol
+        }));
+        // TODO: Implement cycle detection
+        const cycles = [];
+        return {
+            nodes,
+            edges,
+            cycles,
+            metrics: {
+                totalNodes: nodes.length,
+                totalEdges: edges.length,
+                cycleCount: cycles.length,
+                averageDepth: 0, // TODO: Calculate
+                maxDepth: 0, // TODO: Calculate
+                stronglyConnectedComponents: 0 // TODO: Calculate
+            }
+        };
+    }
+    /**
+     * Get analysis summary
+     */
+    async getAnalysisSummary() {
+        if (!this.crossLanguageEntitiesCollection || !this.crossReferencesCollection) {
+            await this.initializeEnhanced();
+        }
+        const entities = this.crossLanguageEntitiesCollection.find();
+        const references = this.crossReferencesCollection.find();
+        const contracts = this.apiContractsCollection.find();
+        const entitiesByLanguage = {};
+        const entitiesByType = {};
+        const complexities = {};
+        for (const entity of entities) {
+            entitiesByLanguage[entity.language] = (entitiesByLanguage[entity.language] || 0) + 1;
+            entitiesByType[entity.type] = (entitiesByType[entity.type] || 0) + 1;
+            if (entity.complexity) {
+                if (!complexities[entity.language])
+                    complexities[entity.language] = [];
+                complexities[entity.language].push(entity.complexity);
+            }
+        }
+        // Calculate average complexities
+        const avgComplexities = {};
+        for (const [lang, values] of Object.entries(complexities)) {
+            avgComplexities[lang] = values.reduce((a, b) => a + b, 0) / values.length;
+        }
+        // Find orphaned entities (no references)
+        const referencedIds = new Set([
+            ...references.map(r => r.sourceId),
+            ...references.map(r => r.targetId)
+        ]);
+        const orphanedEntities = entities
+            .filter(e => !referencedIds.has(e.id))
+            .map(e => e.id);
+        return {
+            totalEntities: entities.length,
+            entitiesByLanguage,
+            entitiesByType,
+            crossReferences: references.length,
+            apiContracts: contracts.length,
+            orphanedEntities,
+            complexities: avgComplexities,
+            coverage: {} // TODO: Calculate test coverage
+        };
+    }
+    /**
+     * Generate entity ID
+     */
+    generateEntityId(entity) {
+        return `${entity.language}:${entity.type}:${entity.file}:${entity.name}:${entity.startLine || 0}`;
+    }
+    /**
+     * Generate search tokens for an entity
+     */
+    generateSearchTokens(entity) {
+        const tokens = new Set();
+        // Add name variations
+        tokens.add(entity.name);
+        tokens.add(entity.name.toLowerCase());
+        // Add camelCase breakdown
+        const camelCaseTokens = entity.name.replace(/([A-Z])/g, ' $1').trim().split(' ');
+        camelCaseTokens.forEach(token => tokens.add(token.toLowerCase()));
+        // Add snake_case breakdown
+        const snakeCaseTokens = entity.name.split('_');
+        snakeCaseTokens.forEach(token => tokens.add(token.toLowerCase()));
+        // Add type and language
+        tokens.add(entity.type);
+        tokens.add(entity.language);
+        // Add purpose keywords
+        const purposeWords = entity.purpose.split(/\s+/);
+        purposeWords.forEach(word => {
+            if (word.length > 2)
+                tokens.add(word.toLowerCase());
+        });
+        return Array.from(tokens);
+    }
+    /**
+     * Get access to the underlying database for advanced operations
+     */
+    getDatabase() {
+        // Protected method to access the underlying database
+        return this.db;
+    }
+}
+/**
+ * Default compatibility adapter for migrating existing data
+ */
+class DefaultCompatibilityAdapter {
+    convertFunction(func) {
+        return {
+            id: this.generateId('function', func.filePath, func.name, func.lineNumber),
+            name: func.name,
+            language: func.language || 'typescript',
+            file: func.filePath,
+            type: 'function',
+            startLine: func.startLine,
+            endLine: func.endLine,
+            lineNumber: func.lineNumber,
+            signature: func.name, // Basic signature, could be enhanced
+            parameters: [], // Would need to be extracted from enhanced metadata
+            purpose: func.purpose,
+            context: func.context,
+            searchTokens: [],
+            calls: [],
+            calledBy: [],
+            implementedBy: [],
+            extendedBy: [],
+            metadata: func.metadata
+        };
+    }
+    convertComponent(comp) {
+        return {
+            id: this.generateId('component', comp.filePath, comp.name, comp.lineNumber),
+            name: comp.name,
+            language: comp.language || 'typescript',
+            file: comp.filePath,
+            type: 'component',
+            startLine: comp.startLine,
+            endLine: comp.endLine,
+            lineNumber: comp.lineNumber,
+            signature: comp.name,
+            parameters: comp.props?.map(prop => ({
+                name: prop.name,
+                type: prop.type,
+                optional: !prop.required,
+                language: 'typescript'
+            })) || [],
+            purpose: comp.purpose,
+            context: comp.context,
+            searchTokens: [],
+            calls: [],
+            calledBy: [],
+            implementedBy: [],
+            extendedBy: [],
+            complexity: comp.complexity,
+            metadata: comp.metadata
+        };
+    }
+    toFunctionMetadata(entity) {
+        return {
+            name: entity.name,
+            filePath: entity.file,
+            lineNumber: entity.lineNumber,
+            startLine: entity.startLine,
+            endLine: entity.endLine,
+            language: entity.language,
+            dependencies: [], // Would need to be extracted from references
+            purpose: entity.purpose,
+            context: entity.context,
+            metadata: entity.metadata
+        };
+    }
+    toComponentMetadata(entity) {
+        // This would need more implementation based on the ComponentMetadata interface
+        throw new Error('Component metadata conversion not implemented');
+    }
+    generateId(type, filePath, name, line) {
+        return `${type}:${filePath}:${name}:${line || 0}`;
+    }
+}
+//# sourceMappingURL=codeIndexDB-enhanced.js.map

package/dist/codeIndexDB-enhanced.js.map

@@ -0,0 +1 @@
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package/dist/codeIndexDb.js

@@ -1139,7 +1139,7 @@ export class CodeIndexDB {
      */
     async synchronizeFile(filePath) {
         this.ensureInitialized();
-        const fs = require('fs').promises;
+        // fs is already imported at the top of the file
         try {
             // Check if file exists
             await fs.access(filePath);
@@ -1205,7 +1205,7 @@ export class CodeIndexDB {
      */
     async bulkCleanup() {
         this.ensureInitialized();
-        const fs = require('fs').promises;
+        // fs is already imported at the top of the file
         const allFunctions = this.functionsCollection.find();
         const fileMap = new Map();
         // Group functions by file