cod-dicomweb-server 1.3.6 → 1.3.8

package/dist/cjs/main.js

@@ -142,7 +142,8 @@ __webpack_require__.r(enums_namespaceObject);
 __webpack_require__.d(enums_namespaceObject, {
   DataRetrieveMode: () => (DataRetrieveMode),
   FetchType: () => (FetchType),
-  RequestType: () => (RequestType)
+  RequestType: () => (RequestType),
+  URLType: () => (URLType)
 });
 
 // NAMESPACE OBJECT: ./src/constants/url.ts
@@ -183,6 +184,12 @@ var DataRetrieveMode = /*#__PURE__*/function (DataRetrieveMode) {
   DataRetrieveMode[DataRetrieveMode["REQUEST"] = 1] = "REQUEST";
   return DataRetrieveMode;
 }({});
+var URLType = /*#__PURE__*/function (URLType) {
+  URLType[URLType["THUMBNAIL"] = 0] = "THUMBNAIL";
+  URLType[URLType["FILE"] = 1] = "FILE";
+  URLType[URLType["OTHERS"] = 2] = "OTHERS";
+  return URLType;
+}({});
 // EXTERNAL MODULE: ./node_modules/dicom-parser/dist/dicomParser.min.js
 var dicomParser_min = __webpack_require__(915);
 ;// ./src/classes/customClasses.ts
@@ -1160,6 +1167,12 @@ function metadataManager_typeof(o) { "@babel/helpers - typeof"; return metadataM
 function metadataManager_regeneratorRuntime() { "use strict"; /*! regenerator-runtime -- Copyright (c) 2014-present, Facebook, Inc. -- license (MIT): https://github.com/facebook/regenerator/blob/main/LICENSE */ metadataManager_regeneratorRuntime = function _regeneratorRuntime() { return e; }; var t, e = {}, r = Object.prototype, n = r.hasOwnProperty, o = Object.defineProperty || function (t, e, r) { t[e] = r.value; }, i = "function" == typeof Symbol ? Symbol : {}, a = i.iterator || "@@iterator", c = i.asyncIterator || "@@asyncIterator", u = i.toStringTag || "@@toStringTag"; function define(t, e, r) { return Object.defineProperty(t, e, { value: r, enumerable: !0, configurable: !0, writable: !0 }), t[e]; } try { define({}, ""); } catch (t) { define = function define(t, e, r) { return t[e] = r; }; } function wrap(t, e, r, n) { var i = e && e.prototype instanceof Generator ? e : Generator, a = Object.create(i.prototype), c = new Context(n || []); return o(a, "_invoke", { value: makeInvokeMethod(t, r, c) }), a; } function tryCatch(t, e, r) { try { return { type: "normal", arg: t.call(e, r) }; } catch (t) { return { type: "throw", arg: t }; } } e.wrap = wrap; var h = "suspendedStart", l = "suspendedYield", f = "executing", s = "completed", y = {}; function Generator() {} function GeneratorFunction() {} function GeneratorFunctionPrototype() {} var p = {}; define(p, a, function () { return this; }); var d = Object.getPrototypeOf, v = d && d(d(values([]))); v && v !== r && n.call(v, a) && (p = v); var g = GeneratorFunctionPrototype.prototype = Generator.prototype = Object.create(p); function defineIteratorMethods(t) { ["next", "throw", "return"].forEach(function (e) { define(t, e, function (t) { return this._invoke(e, t); }); }); } function AsyncIterator(t, e) { function invoke(r, o, i, a) { var c = tryCatch(t[r], t, o); if ("throw" !== c.type) { var u = c.arg, h = u.value; return h && "object" == metadataManager_typeof(h) && n.call(h, "__await") ? e.resolve(h.__await).then(function (t) { invoke("next", t, i, a); }, function (t) { invoke("throw", t, i, a); }) : e.resolve(h).then(function (t) { u.value = t, i(u); }, function (t) { return invoke("throw", t, i, a); }); } a(c.arg); } var r; o(this, "_invoke", { value: function value(t, n) { function callInvokeWithMethodAndArg() { return new e(function (e, r) { invoke(t, n, e, r); }); } return r = r ? r.then(callInvokeWithMethodAndArg, callInvokeWithMethodAndArg) : callInvokeWithMethodAndArg(); } }); } function makeInvokeMethod(e, r, n) { var o = h; return function (i, a) { if (o === f) throw Error("Generator is already running"); if (o === s) { if ("throw" === i) throw a; return { value: t, done: !0 }; } for (n.method = i, n.arg = a;;) { var c = n.delegate; if (c) { var u = maybeInvokeDelegate(c, n); if (u) { if (u === y) continue; return u; } } if ("next" === n.method) n.sent = n._sent = n.arg;else if ("throw" === n.method) { if (o === h) throw o = s, n.arg; n.dispatchException(n.arg); } else "return" === n.method && n.abrupt("return", n.arg); o = f; var p = tryCatch(e, r, n); if ("normal" === p.type) { if (o = n.done ? s : l, p.arg === y) continue; return { value: p.arg, done: n.done }; } "throw" === p.type && (o = s, n.method = "throw", n.arg = p.arg); } }; } function maybeInvokeDelegate(e, r) { var n = r.method, o = e.iterator[n]; if (o === t) return r.delegate = null, "throw" === n && e.iterator["return"] && (r.method = "return", r.arg = t, maybeInvokeDelegate(e, r), "throw" === r.method) || "return" !== n && (r.method = "throw", r.arg = new TypeError("The iterator does not provide a '" + n + "' method")), y; var i = tryCatch(o, e.iterator, r.arg); if ("throw" === i.type) return r.method = "throw", r.arg = i.arg, r.delegate = null, y; var a = i.arg; return a ? a.done ? (r[e.resultName] = a.value, r.next = e.nextLoc, "return" !== r.method && (r.method = "next", r.arg = t), r.delegate = null, y) : a : (r.method = "throw", r.arg = new TypeError("iterator result is not an object"), r.delegate = null, y); } function pushTryEntry(t) { var e = { tryLoc: t[0] }; 1 in t && (e.catchLoc = t[1]), 2 in t && (e.finallyLoc = t[2], e.afterLoc = t[3]), this.tryEntries.push(e); } function resetTryEntry(t) { var e = t.completion || {}; e.type = "normal", delete e.arg, t.completion = e; } function Context(t) { this.tryEntries = [{ tryLoc: "root" }], t.forEach(pushTryEntry, this), this.reset(!0); } function values(e) { if (e || "" === e) { var r = e[a]; if (r) return r.call(e); if ("function" == typeof e.next) return e; if (!isNaN(e.length)) { var o = -1, i = function next() { for (; ++o < e.length;) if (n.call(e, o)) return next.value = e[o], next.done = !1, next; return next.value = t, next.done = !0, next; }; return i.next = i; } } throw new TypeError(metadataManager_typeof(e) + " is not iterable"); } return GeneratorFunction.prototype = GeneratorFunctionPrototype, o(g, "constructor", { value: GeneratorFunctionPrototype, configurable: !0 }), o(GeneratorFunctionPrototype, "constructor", { value: GeneratorFunction, configurable: !0 }), GeneratorFunction.displayName = define(GeneratorFunctionPrototype, u, "GeneratorFunction"), e.isGeneratorFunction = function (t) { var e = "function" == typeof t && t.constructor; return !!e && (e === GeneratorFunction || "GeneratorFunction" === (e.displayName || e.name)); }, e.mark = function (t) { return Object.setPrototypeOf ? Object.setPrototypeOf(t, GeneratorFunctionPrototype) : (t.__proto__ = GeneratorFunctionPrototype, define(t, u, "GeneratorFunction")), t.prototype = Object.create(g), t; }, e.awrap = function (t) { return { __await: t }; }, defineIteratorMethods(AsyncIterator.prototype), define(AsyncIterator.prototype, c, function () { return this; }), e.AsyncIterator = AsyncIterator, e.async = function (t, r, n, o, i) { void 0 === i && (i = Promise); var a = new AsyncIterator(wrap(t, r, n, o), i); return e.isGeneratorFunction(r) ? a : a.next().then(function (t) { return t.done ? t.value : a.next(); }); }, defineIteratorMethods(g), define(g, u, "Generator"), define(g, a, function () { return this; }), define(g, "toString", function () { return "[object Generator]"; }), e.keys = function (t) { var e = Object(t), r = []; for (var n in e) r.push(n); return r.reverse(), function next() { for (; r.length;) { var t = r.pop(); if (t in e) return next.value = t, next.done = !1, next; } return next.done = !0, next; }; }, e.values = values, Context.prototype = { constructor: Context, reset: function reset(e) { if (this.prev = 0, this.next = 0, this.sent = this._sent = t, this.done = !1, this.delegate = null, this.method = "next", this.arg = t, this.tryEntries.forEach(resetTryEntry), !e) for (var r in this) "t" === r.charAt(0) && n.call(this, r) && !isNaN(+r.slice(1)) && (this[r] = t); }, stop: function stop() { this.done = !0; var t = this.tryEntries[0].completion; if ("throw" === t.type) throw t.arg; return this.rval; }, dispatchException: function dispatchException(e) { if (this.done) throw e; var r = this; function handle(n, o) { return a.type = "throw", a.arg = e, r.next = n, o && (r.method = "next", r.arg = t), !!o; } for (var o = this.tryEntries.length - 1; o >= 0; --o) { var i = this.tryEntries[o], a = i.completion; if ("root" === i.tryLoc) return handle("end"); if (i.tryLoc <= this.prev) { var c = n.call(i, "catchLoc"), u = n.call(i, "finallyLoc"); if (c && u) { if (this.prev < i.catchLoc) return handle(i.catchLoc, !0); if (this.prev < i.finallyLoc) return handle(i.finallyLoc); } else if (c) { if (this.prev < i.catchLoc) return handle(i.catchLoc, !0); } else { if (!u) throw Error("try statement without catch or finally"); if (this.prev < i.finallyLoc) return handle(i.finallyLoc); } } } }, abrupt: function abrupt(t, e) { for (var r = this.tryEntries.length - 1; r >= 0; --r) { var o = this.tryEntries[r]; if (o.tryLoc <= this.prev && n.call(o, "finallyLoc") && this.prev < o.finallyLoc) { var i = o; break; } } i && ("break" === t || "continue" === t) && i.tryLoc <= e && e <= i.finallyLoc && (i = null); var a = i ? i.completion : {}; return a.type = t, a.arg = e, i ? (this.method = "next", this.next = i.finallyLoc, y) : this.complete(a); }, complete: function complete(t, e) { if ("throw" === t.type) throw t.arg; return "break" === t.type || "continue" === t.type ? this.next = t.arg : "return" === t.type ? (this.rval = this.arg = t.arg, this.method = "return", this.next = "end") : "normal" === t.type && e && (this.next = e), y; }, finish: function finish(t) { for (var e = this.tryEntries.length - 1; e >= 0; --e) { var r = this.tryEntries[e]; if (r.finallyLoc === t) return this.complete(r.completion, r.afterLoc), resetTryEntry(r), y; } }, "catch": function _catch(t) { for (var e = this.tryEntries.length - 1; e >= 0; --e) { var r = this.tryEntries[e]; if (r.tryLoc === t) { var n = r.completion; if ("throw" === n.type) { var o = n.arg; resetTryEntry(r); } return o; } } throw Error("illegal catch attempt"); }, delegateYield: function delegateYield(e, r, n) { return this.delegate = { iterator: values(e), resultName: r, nextLoc: n }, "next" === this.method && (this.arg = t), y; } }, e; }
 function metadataManager_asyncGeneratorStep(n, t, e, r, o, a, c) { try { var i = n[a](c), u = i.value; } catch (n) { return void e(n); } i.done ? t(u) : Promise.resolve(u).then(r, o); }
 function metadataManager_asyncToGenerator(n) { return function () { var t = this, e = arguments; return new Promise(function (r, o) { var a = n.apply(t, e); function _next(n) { metadataManager_asyncGeneratorStep(a, r, o, _next, _throw, "next", n); } function _throw(n) { metadataManager_asyncGeneratorStep(a, r, o, _next, _throw, "throw", n); } _next(void 0); }); }; }
+function metadataManager_slicedToArray(r, e) { return metadataManager_arrayWithHoles(r) || metadataManager_iterableToArrayLimit(r, e) || metadataManager_unsupportedIterableToArray(r, e) || metadataManager_nonIterableRest(); }
+function metadataManager_nonIterableRest() { throw new TypeError("Invalid attempt to destructure non-iterable instance.\nIn order to be iterable, non-array objects must have a [Symbol.iterator]() method."); }
+function metadataManager_unsupportedIterableToArray(r, a) { if (r) { if ("string" == typeof r) return metadataManager_arrayLikeToArray(r, a); var t = {}.toString.call(r).slice(8, -1); return "Object" === t && r.constructor && (t = r.constructor.name), "Map" === t || "Set" === t ? Array.from(r) : "Arguments" === t || /^(?:Ui|I)nt(?:8|16|32)(?:Clamped)?Array$/.test(t) ? metadataManager_arrayLikeToArray(r, a) : void 0; } }
+function metadataManager_arrayLikeToArray(r, a) { (null == a || a > r.length) && (a = r.length); for (var e = 0, n = Array(a); e < a; e++) n[e] = r[e]; return n; }
+function metadataManager_iterableToArrayLimit(r, l) { var t = null == r ? null : "undefined" != typeof Symbol && r[Symbol.iterator] || r["@@iterator"]; if (null != t) { var e, n, i, u, a = [], f = !0, o = !1; try { if (i = (t = t.call(r)).next, 0 === l) { if (Object(t) !== t) return; f = !1; } else for (; !(f = (e = i.call(t)).done) && (a.push(e.value), a.length !== l); f = !0); } catch (r) { o = !0, n = r; } finally { try { if (!f && null != t["return"] && (u = t["return"](), Object(u) !== u)) return; } finally { if (o) throw n; } } return a; } }
+function metadataManager_arrayWithHoles(r) { if (Array.isArray(r)) return r; }
 function metadataManager_classCallCheck(a, n) { if (!(a instanceof n)) throw new TypeError("Cannot call a class as a function"); }
 function metadataManager_defineProperties(e, r) { for (var t = 0; t < r.length; t++) { var o = r[t]; o.enumerable = o.enumerable || !1, o.configurable = !0, "value" in o && (o.writable = !0), Object.defineProperty(e, metadataManager_toPropertyKey(o.key), o); } }
 function metadataManager_createClass(e, r, t) { return r && metadataManager_defineProperties(e.prototype, r), t && metadataManager_defineProperties(e, t), Object.defineProperty(e, "prototype", { writable: !1 }), e; }
@@ -1175,24 +1188,28 @@ var MetadataManager = /*#__PURE__*/function () {
   }
   return metadataManager_createClass(MetadataManager, [{
     key: "addDeidMetadata",
-    value: function addDeidMetadata(jsonMetadata) {
-      var deid_study_uid = jsonMetadata.deid_study_uid,
-        deid_series_uid = jsonMetadata.deid_series_uid,
-        cod = jsonMetadata.cod;
-      if (!cod || !deid_study_uid || !deid_series_uid) {
+    value: function addDeidMetadata(jsonMetadata, url) {
+      var _url$match;
+      var cod = jsonMetadata.cod;
+      var _url$match$1$split = (_url$match = url.match(/studies\/(.*?)\/metadata/)) === null || _url$match === void 0 ? void 0 : _url$match[1].split('/'),
+        _url$match$1$split2 = metadataManager_slicedToArray(_url$match$1$split, 3),
+        studyUID = _url$match$1$split2[0],
+        _ = _url$match$1$split2[1],
+        seriesUID = _url$match$1$split2[2];
+      if (!cod || !studyUID || !seriesUID) {
         console.warn('Missing required metadata properties: cod, deid_study_uid, or deid_series_uid');
         return;
       }
-      for (var deid_sop_uid in cod.instances) {
-        var instance = cod.instances[deid_sop_uid];
+      for (var sopUID in cod.instances) {
+        var instance = cod.instances[sopUID];
         instance.metadata.DeidStudyInstanceUID = {
-          Value: [deid_study_uid]
+          Value: [studyUID]
         };
         instance.metadata.DeidSeriesInstanceUID = {
-          Value: [deid_series_uid]
+          Value: [seriesUID]
         };
         instance.metadata.DeidSopInstanceUID = {
-          Value: [deid_sop_uid]
+          Value: [sopUID]
         };
       }
     }
@@ -1236,7 +1253,7 @@ var MetadataManager = /*#__PURE__*/function () {
                 }
                 return response.json();
               }).then(function (data) {
-                _this.addDeidMetadata(data);
+                _this.addDeidMetadata(data, url);
                 return data;
               });
               _context.next = 12;
@@ -1660,6 +1677,23 @@ function _writeFile() {
   }));
   return _writeFile.apply(this, arguments);
 }
+function download(fileName, file) {
+  try {
+    var blob = new Blob([file], {
+      type: 'application/x-tar'
+    });
+    var url = URL.createObjectURL(blob);
+    var a = document.createElement('a');
+    a.href = url;
+    a.download = fileName;
+    a.click();
+    URL.revokeObjectURL(url);
+    return true;
+  } catch (error) {
+    console.warn("Error downloading file - ".concat(fileName, ": ") + error.message);
+    return false;
+  }
+}
 function clearPartialFiles() {
   return _clearPartialFiles.apply(this, arguments);
 }
@@ -2047,11 +2081,17 @@ var CodDicomWebServer = /*#__PURE__*/function () {
   }
   return CodDicomWebServer_createClass(CodDicomWebServer, [{
     key: "addFileUrl",
-    value: function addFileUrl(seriesInstanceUID, url) {
+    value: function addFileUrl(seriesInstanceUID, type, url) {
       if (this.seriesUidFileUrls[seriesInstanceUID]) {
-        this.seriesUidFileUrls[seriesInstanceUID].push(url);
+        this.seriesUidFileUrls[seriesInstanceUID].add({
+          type: type,
+          url: url
+        });
       } else {
-        this.seriesUidFileUrls[seriesInstanceUID] = [url];
+        this.seriesUidFileUrls[seriesInstanceUID] = new Set([{
+          type: type,
+          url: url
+        }]);
       }
     }
   }, {
@@ -2132,7 +2172,7 @@ var CodDicomWebServer = /*#__PURE__*/function () {
               }
               throw new CustomError("Thumbnail not found for ".concat(wadorsUrl));
             case 19:
-              this.addFileUrl(seriesInstanceUID, thumbnailUrl);
+              this.addFileUrl(seriesInstanceUID, URLType.THUMBNAIL, thumbnailUrl);
               return _context.abrupt("return", this.fetchFile(thumbnailUrl, headers, {
                 useSharedArrayBuffer: useSharedArrayBuffer
               }));
@@ -2147,7 +2187,7 @@ var CodDicomWebServer = /*#__PURE__*/function () {
               if (fetchType === FetchType.BYTES_OPTIMIZED) {
                 urlWithBytes = "".concat(fileUrl, "?bytes=").concat(startByte, "-").concat(endByte);
               }
-              this.addFileUrl(seriesInstanceUID, fileUrl);
+              this.addFileUrl(seriesInstanceUID, URLType.FILE, fileUrl);
               return _context.abrupt("return", this.fetchFile(urlWithBytes, headers, {
                 offsets: {
                   startByte: startByte,
@@ -2194,7 +2234,7 @@ var CodDicomWebServer = /*#__PURE__*/function () {
                       var dataSet = (0,dicomParser_min.parseDicom)(new Uint8Array(result));
                       var _seriesInstanceUID = dataSet.string('0020000e');
                       if (_seriesInstanceUID) {
-                        _this2.addFileUrl(_seriesInstanceUID, wadorsUrl);
+                        _this2.addFileUrl(_seriesInstanceUID, URLType.OTHERS, wadorsUrl);
                       }
                     } catch (error) {
                       console.warn('CodDicomWebServer.ts: There is some issue parsing the file.', error);
@@ -2422,14 +2462,30 @@ var CodDicomWebServer = /*#__PURE__*/function () {
       }
       return fetchFile;
     }()
+  }, {
+    key: "downloadSeriesFile",
+    value: function downloadSeriesFile(seriesInstanceUID) {
+      var _Array$from$find;
+      var seriesFileURL = (_Array$from$find = Array.from(this.seriesUidFileUrls[seriesInstanceUID]).find(function (_ref3) {
+        var url = _ref3.url,
+          type = _ref3.type;
+        return type === URLType.FILE && url.endsWith('.tar');
+      })) === null || _Array$from$find === void 0 ? void 0 : _Array$from$find.url;
+      if (seriesFileURL) {
+        var seriesArrayBuffer = this.fileManager.get(seriesFileURL);
+        return download(seriesFileURL.split('/').at(-1), seriesArrayBuffer);
+      }
+      return false;
+    }
   }, {
     key: "delete",
     value: function _delete(seriesInstanceUID) {
       var _this4 = this;
       var fileUrls = this.seriesUidFileUrls[seriesInstanceUID];
       if (fileUrls) {
-        fileUrls.forEach(function (fileUrl) {
-          _this4.fileManager.remove(fileUrl);
+        fileUrls.forEach(function (_ref4) {
+          var url = _ref4.url;
+          _this4.fileManager.remove(url);
         });
       }
       delete this.seriesUidFileUrls[seriesInstanceUID];
@@ -2439,8 +2495,9 @@ var CodDicomWebServer = /*#__PURE__*/function () {
     value: function deleteAll() {
       var _this5 = this;
       Object.values(this.seriesUidFileUrls).forEach(function (fileUrls) {
-        fileUrls.forEach(function (fileUrl) {
-          _this5.fileManager.remove(fileUrl);
+        fileUrls.forEach(function (_ref5) {
+          var url = _ref5.url;
+          _this5.fileManager.remove(url);
         });
       });
       this.seriesUidFileUrls = {};
@@ -2450,10 +2507,10 @@ var CodDicomWebServer = /*#__PURE__*/function () {
     value: function parseMetadata(metadata, type, sopInstanceUID) {
       if (type === RequestType.INSTANCE_METADATA) {
         var _Object$entries$find;
-        return (_Object$entries$find = Object.entries(metadata.cod.instances).find(function (_ref3) {
-          var _ref4 = CodDicomWebServer_slicedToArray(_ref3, 2),
-            key = _ref4[0],
-            instance = _ref4[1];
+        return (_Object$entries$find = Object.entries(metadata.cod.instances).find(function (_ref6) {
+          var _ref7 = CodDicomWebServer_slicedToArray(_ref6, 2),
+            key = _ref7[0],
+            instance = _ref7[1];
           return key === sopInstanceUID;
         })) === null || _Object$entries$find === void 0 ? void 0 : _Object$entries$find[1].metadata;
       } else {

package/dist/esm/classes/CodDicomWebServer.d.ts

@@ -14,9 +14,10 @@ declare class CodDicomWebServer {
     });
     setOptions: (newOptions: Partial<CodDicomWebServerOptions>) => void;
     getOptions: () => CodDicomWebServerOptions;
-    addFileUrl(seriesInstanceUID: string, url: string): void;
+    addFileUrl(seriesInstanceUID: string, type: Enums.URLType, url: string): void;
     fetchCod(wadorsUrl: string, headers?: Record<string, string> | undefined, { useSharedArrayBuffer, fetchType }?: CODRequestOptions): Promise<ArrayBufferLike | InstanceMetadata | SeriesMetadata | undefined>;
     fetchFile(fileUrl: string, headers: Record<string, string>, { offsets, useSharedArrayBuffer, fetchType }?: FileRequestOptions): Promise<ArrayBufferLike | undefined>;
+    downloadSeriesFile(seriesInstanceUID: string): boolean;
     delete(seriesInstanceUID: string): void;
     deleteAll(): void;
     parseMetadata(metadata: JsonMetadata, type: Enums.RequestType, sopInstanceUID: string): InstanceMetadata | SeriesMetadata;

package/dist/esm/classes/CodDicomWebServer.js

@@ -7,7 +7,7 @@ import constants, { Enums } from '../constants';
 import { getDataRetrievalManager } from '../dataRetrieval/dataRetrievalManager';
 import { CustomError } from './customClasses';
 import { CustomErrorEvent } from './customClasses';
-import { getDirectoryHandle } from '../fileAccessSystemUtils';
+import { download, getDirectoryHandle } from '../fileAccessSystemUtils';
 class CodDicomWebServer {
     filePromises = {};
     options = {
@@ -43,12 +43,12 @@ class CodDicomWebServer {
     getOptions = () => {
         return this.options;
     };
-    addFileUrl(seriesInstanceUID, url) {
+    addFileUrl(seriesInstanceUID, type, url) {
         if (this.seriesUidFileUrls[seriesInstanceUID]) {
-            this.seriesUidFileUrls[seriesInstanceUID].push(url);
+            this.seriesUidFileUrls[seriesInstanceUID].add({ type, url });
         }
         else {
-            this.seriesUidFileUrls[seriesInstanceUID] = [url];
+            this.seriesUidFileUrls[seriesInstanceUID] = new Set([{ type, url }]);
         }
     }
     async fetchCod(wadorsUrl, headers = {}, { useSharedArrayBuffer = false, fetchType = constants.Enums.FetchType.API_OPTIMIZED } = {}) {
@@ -79,7 +79,7 @@ class CodDicomWebServer {
                         if (!thumbnailUrl) {
                             throw new CustomError(`Thumbnail not found for ${wadorsUrl}`);
                         }
-                        this.addFileUrl(seriesInstanceUID, thumbnailUrl);
+                        this.addFileUrl(seriesInstanceUID, Enums.URLType.THUMBNAIL, thumbnailUrl);
                         return this.fetchFile(thumbnailUrl, headers, {
                             useSharedArrayBuffer
                         });
@@ -91,7 +91,7 @@ class CodDicomWebServer {
                         if (fetchType === Enums.FetchType.BYTES_OPTIMIZED) {
                             urlWithBytes = `${fileUrl}?bytes=${startByte}-${endByte}`;
                         }
-                        this.addFileUrl(seriesInstanceUID, fileUrl);
+                        this.addFileUrl(seriesInstanceUID, Enums.URLType.FILE, fileUrl);
                         return this.fetchFile(urlWithBytes, headers, {
                             offsets: { startByte, endByte },
                             useSharedArrayBuffer,
@@ -134,7 +134,7 @@ class CodDicomWebServer {
                                 const dataSet = parseDicom(new Uint8Array(result));
                                 const seriesInstanceUID = dataSet.string('0020000e');
                                 if (seriesInstanceUID) {
-                                    this.addFileUrl(seriesInstanceUID, wadorsUrl);
+                                    this.addFileUrl(seriesInstanceUID, Enums.URLType.OTHERS, wadorsUrl);
                                 }
                             }
                             catch (error) {
@@ -299,19 +299,27 @@ class CodDicomWebServer {
             });
         });
     }
+    downloadSeriesFile(seriesInstanceUID) {
+        const seriesFileURL = Array.from(this.seriesUidFileUrls[seriesInstanceUID]).find(({ url, type }) => type === Enums.URLType.FILE && url.endsWith('.tar'))?.url;
+        if (seriesFileURL) {
+            const seriesArrayBuffer = this.fileManager.get(seriesFileURL);
+            return download(seriesFileURL.split('/').at(-1), seriesArrayBuffer);
+        }
+        return false;
+    }
     delete(seriesInstanceUID) {
         const fileUrls = this.seriesUidFileUrls[seriesInstanceUID];
         if (fileUrls) {
-            fileUrls.forEach((fileUrl) => {
-                this.fileManager.remove(fileUrl);
+            fileUrls.forEach(({ url }) => {
+                this.fileManager.remove(url);
             });
         }
         delete this.seriesUidFileUrls[seriesInstanceUID];
     }
     deleteAll() {
         Object.values(this.seriesUidFileUrls).forEach((fileUrls) => {
-            fileUrls.forEach((fileUrl) => {
-                this.fileManager.remove(fileUrl);
+            fileUrls.forEach(({ url }) => {
+                this.fileManager.remove(url);
             });
         });
         this.seriesUidFileUrls = {};

package/dist/esm/constants/enums.d.ts

@@ -19,3 +19,8 @@ export declare enum DataRetrieveMode {
     WORKER = 0,
     REQUEST = 1
 }
+export declare enum URLType {
+    THUMBNAIL = 0,
+    FILE = 1,
+    OTHERS = 2
+}

package/dist/esm/constants/enums.js

@@ -22,3 +22,9 @@ export var DataRetrieveMode;
     DataRetrieveMode[DataRetrieveMode["WORKER"] = 0] = "WORKER";
     DataRetrieveMode[DataRetrieveMode["REQUEST"] = 1] = "REQUEST";
 })(DataRetrieveMode || (DataRetrieveMode = {}));
+export var URLType;
+(function (URLType) {
+    URLType[URLType["THUMBNAIL"] = 0] = "THUMBNAIL";
+    URLType[URLType["FILE"] = 1] = "FILE";
+    URLType[URLType["OTHERS"] = 2] = "OTHERS";
+})(URLType || (URLType = {}));

package/dist/esm/fileAccessSystemUtils.d.ts

@@ -4,6 +4,7 @@ export declare function readFile(directoryHandle: FileSystemDirectoryHandle, nam
     endByte: number;
 }): Promise<ArrayBuffer>;
 export declare function writeFile(directoryHandle: FileSystemDirectoryHandle, name: string, file: ArrayBuffer): Promise<void>;
+export declare function download(fileName: string, file: ArrayBuffer): boolean;
 export declare function clearPartialFiles(): Promise<void>;
 export declare function createStreamingFileName(url: string): string;
 export declare function createPartialFileName(url: string, offsets?: {

package/dist/esm/fileAccessSystemUtils.js

@@ -66,6 +66,22 @@ export async function writeFile(directoryHandle, name, file) {
         console.warn(`Error writing the file ${name}: ${error.message}`);
     }
 }
+export function download(fileName, file) {
+    try {
+        const blob = new Blob([file], { type: 'application/x-tar' });
+        const url = URL.createObjectURL(blob);
+        const a = document.createElement('a');
+        a.href = url;
+        a.download = fileName;
+        a.click();
+        URL.revokeObjectURL(url);
+        return true;
+    }
+    catch (error) {
+        console.warn(`Error downloading file - ${fileName}: ` + error.message);
+        return false;
+    }
+}
 export async function clearPartialFiles() {
     try {
         await directoryHandle.removeEntry(FILE_SYSTEM_ROUTES.Partial, { recursive: true });

package/dist/esm/metadataManager.d.ts

@@ -2,7 +2,7 @@ import type { JsonMetadata, MetadataUrlCreationParams } from './types';
 declare class MetadataManager {
     private metadataPromises;
     constructor();
-    addDeidMetadata(jsonMetadata: JsonMetadata): void;
+    addDeidMetadata(jsonMetadata: JsonMetadata, url: string): void;
     getMetadataFromCache(url: string): Promise<JsonMetadata>;
     getMetadata(params: MetadataUrlCreationParams, headers: Record<string, string>): Promise<JsonMetadata | null>;
 }

package/dist/esm/metadataManager.js

@@ -3,17 +3,18 @@ import { createMetadataJsonUrl } from './classes/utils';
 class MetadataManager {
     metadataPromises = {};
     constructor() { }
-    addDeidMetadata(jsonMetadata) {
-        const { deid_study_uid, deid_series_uid, cod } = jsonMetadata;
-        if (!cod || !deid_study_uid || !deid_series_uid) {
+    addDeidMetadata(jsonMetadata, url) {
+        const { cod } = jsonMetadata;
+        const [studyUID, _, seriesUID] = url.match(/studies\/(.*?)\/metadata/)?.[1].split('/');
+        if (!cod || !studyUID || !seriesUID) {
             console.warn('Missing required metadata properties: cod, deid_study_uid, or deid_series_uid');
             return;
         }
-        for (const deid_sop_uid in cod.instances) {
-            const instance = cod.instances[deid_sop_uid];
-            instance.metadata.DeidStudyInstanceUID = { Value: [deid_study_uid] };
-            instance.metadata.DeidSeriesInstanceUID = { Value: [deid_series_uid] };
-            instance.metadata.DeidSopInstanceUID = { Value: [deid_sop_uid] };
+        for (const sopUID in cod.instances) {
+            const instance = cod.instances[sopUID];
+            instance.metadata.DeidStudyInstanceUID = { Value: [studyUID] };
+            instance.metadata.DeidSeriesInstanceUID = { Value: [seriesUID] };
+            instance.metadata.DeidSopInstanceUID = { Value: [sopUID] };
         }
     }
     getMetadataFromCache(url) {
@@ -37,7 +38,7 @@ class MetadataManager {
                 return response.json();
             })
                 .then((data) => {
-                this.addDeidMetadata(data);
+                this.addDeidMetadata(data, url);
                 return data;
             });
             return await this.metadataPromises[url];

package/dist/umd/563.js

@@ -1,6 +1,6 @@
 /*!
  * 
- * cod-dicomweb-server v1.3.4
+ * cod-dicomweb-server v1.3.7
  * git+https://github.com/gradienthealth/cod-dicomweb-server.git
  *
  *   Copyright (c) Adithyan Dinesh and project contributors.