cod-dicomweb-server 1.0.0

package/dist/webWorker/workers/fileStreaming.ts

@@ -0,0 +1,130 @@
+import { expose } from 'comlink';
+
+const fileStreaming = {
+  maxFetchSize: 0,
+  fetchedSize: 0,
+
+  setMaxFetchSize(size: number): void {
+    if (size > 0) {
+      this.maxFetchSize = size;
+    }
+  },
+
+  decreaseFetchedSize(size: number): void {
+    if (size > 0 && size <= this.fetchedSize) {
+      this.fetchedSize -= size;
+    }
+  },
+
+  async stream(args: {
+    url: string;
+    headers?: Record<string, string>;
+    useSharedArrayBuffer?: boolean;
+  }): Promise<void> {
+    const { url, headers, useSharedArrayBuffer } = args;
+    const controller = new AbortController();
+    let sharedArraybuffer: SharedArrayBuffer | null = null;
+    let fileArraybuffer: Uint8Array | null = null;
+
+    try {
+      const response = await fetch(url, {
+        headers: { ...headers },
+        signal: controller.signal,
+      });
+
+      if (!response.ok) {
+        throw new Error(`HTTP error! status: ${response.status}`);
+      }
+
+      const reader = response.body?.getReader();
+      if (!reader) {
+        throw new Error('Failed to get reader from response body');
+      }
+
+      let result: ReadableStreamReadResult<Uint8Array>;
+      let completed = false;
+      const totalLength = parseInt(
+        response.headers.get('Content-Length') || '0',
+        10,
+      );
+      const firstChunk = await reader.read();
+      completed = firstChunk.done;
+
+      if (!firstChunk.value) {
+        throw new Error('The fetched chunks does not have value');
+      }
+
+      if (!completed) {
+        let position = firstChunk.value.length;
+
+        if (
+          this.maxFetchSize &&
+          this.fetchedSize + position > this.maxFetchSize
+        ) {
+          controller.abort();
+          throw new Error(
+            `Maximum size(${this.maxFetchSize}) for fetching files reached`,
+          );
+        }
+
+        this.fetchedSize += position;
+
+        if (useSharedArrayBuffer) {
+          sharedArraybuffer = new SharedArrayBuffer(totalLength);
+          fileArraybuffer = new Uint8Array(sharedArraybuffer);
+        } else {
+          fileArraybuffer = new Uint8Array(totalLength);
+        }
+        fileArraybuffer.set(firstChunk.value);
+        postMessage({ url, position, fileArraybuffer });
+
+        while (!completed) {
+          result = await reader.read();
+
+          if (result.done) {
+            completed = true;
+            continue;
+          }
+
+          const chunk = result.value;
+
+          if (
+            this.maxFetchSize &&
+            this.fetchedSize + chunk.length > this.maxFetchSize
+          ) {
+            sharedArraybuffer = null;
+            fileArraybuffer = null;
+            controller.abort();
+            throw new Error(
+              `Maximum size(${this.maxFetchSize}) for fetching files reached`,
+            );
+          }
+
+          this.fetchedSize += chunk.length;
+          fileArraybuffer.set(chunk, position);
+          position += chunk.length;
+
+          postMessage({
+            isAppending: true,
+            url,
+            position: position,
+            chunk: !useSharedArrayBuffer ? chunk : null,
+          });
+        }
+      }
+    } catch (error) {
+      const streamingError = new Error(
+        'fileStreaming.ts: ' + (error as Error).message ||
+          'An error occured when streaming',
+      );
+      console.error(streamingError.message, error);
+      throw streamingError;
+    } finally {
+      sharedArraybuffer = null;
+      fileArraybuffer = null;
+      controller.abort();
+    }
+  },
+};
+
+expose(fileStreaming);

package/package.json

@@ -0,0 +1,86 @@
+{
+  "name": "cod-dicomweb-server",
+  "title": "COD Dicomweb server",
+  "version": "1.0.0",
+  "private": false,
+  "description": "A wadors server proxy that get data from a COD format.",
+  "license": "MIT",
+  "author": "Adithyan DInesh",
+  "type": "module",
+  "main": "./dist/index.ts",
+  "keywords": [
+    "cod-dicomweb-server",
+    "server",
+    "cod",
+    "cloud-optimized-dicom",
+    "wadors-proxy",
+    "file-streaming",
+    "streaming"
+  ],
+  "files": [
+    "dist"
+  ],
+  "repository": "git+https://github.com/gradienthealth/cod-dicomweb-server.git",
+  "bugs": {
+    "url": "https://github.com/gradienthealth/cod-dicomweb-server/issues"
+  },
+  "homepage": "https://github.com/gradienthealth/cod-dicomweb-server#readme",
+  "scripts": {
+    "build": "webpack --progress --config webpack.config.babel.js",
+    "check-size": "webpack --config webpack.config.babel.js --profile --json > webpack-stats.json && webpack-bundle-analyzer webpack-stats.json",
+    "check-types": "tsc --project tsconfig.json --noEmit",
+    "dev": "yarn serve",
+    "lint": "yarn lint:all",
+    "lint:all": "yarn lint:scripts && yarn check-types",
+    "lint:all:fix": "yarn lint:scripts:fix && yarn lint:styles:fix",
+    "lint:fix": "yarn lint:all:fix",
+    "lint:scripts": "eslint --ignore-path .gitignore **/*.{js,jsx,cjs,json,ts,tsx}",
+    "lint:scripts:fix": "yarn lint:scripts --fix",
+    "prepare": "husky install",
+    "serve": "cross-env NODE_ENV=development webpack serve --config webpack.config.babel.js",
+    "test": "jest",
+    "test:watch": "yarn test --watch"
+  },
+  "browserslist": [
+    "defaults"
+  ],
+  "devDependencies": {
+    "@babel/core": "^7.23.9",
+    "@babel/preset-env": "^7.23.9",
+    "@babel/preset-typescript": "^7.23.3",
+    "@babel/register": "^7.23.7",
+    "@types/jest": "^29.5.12",
+    "@typescript-eslint/eslint-plugin": "^6.20.0",
+    "@typescript-eslint/parser": "^6.20.0",
+    "babel-jest": "^29.7.0",
+    "babel-loader": "^9.1.3",
+    "clean-webpack-plugin": "^4.0.0",
+    "copy-webpack-plugin": "^11.0.0",
+    "core-js": "^3.35.1",
+    "cross-env": "^7.0.3",
+    "dotenv": "^16.3.1",
+    "eslint": "^8.56.0",
+    "eslint-config-prettier": "^9.1.0",
+    "eslint-plugin-jest-formatting": "^3.1.0",
+    "eslint-webpack-plugin": "^4.0.1",
+    "html-webpack-plugin": "^5.6.0",
+    "husky": "^8.0.3",
+    "jest": "^29.7.0",
+    "lint-staged": "^15.2.1",
+    "prettier": "^3.1.0",
+    "style-loader": "^3.3.4",
+    "terser-webpack-plugin": "^5.3.10",
+    "ts-jest": "^29.1.2",
+    "ts-loader": "^9.5.1",
+    "typescript": "^5.3.3",
+    "webpack": "^5.89.0",
+    "webpack-bundle-analyzer": "^4.10.1",
+    "webpack-cli": "^5.1.4",
+    "webpack-dev-server": "^v4.15.1",
+    "webpack-merge": "^5.10.0"
+  },
+  "dependencies": {
+    "comlink": "^4.4.2",
+    "dicom-parser": "^1.8.21"
+  }
+}