cmdr-agent 2.1.2 → 2.2.0

package/dist/src/tools/built-in/index.js

@@ -10,15 +10,21 @@ import { globTool } from './glob.js';
 import { gitDiffTool } from './git-diff.js';
 import { gitLogTool } from './git-log.js';
 import { gitCommitTool, gitBranchTool } from './git-commit.js';
+import { gitWorktreeTool } from './git-worktree.js';
 import { thinkTool } from './think.js';
 import { webFetchTool } from './web-fetch.js';
 import { askUserTool } from './ask-user.js';
-export { bashTool, fileReadTool, fileWriteTool, fileEditTool, grepTool, globTool, gitDiffTool, gitLogTool, gitCommitTool, gitBranchTool, thinkTool, webFetchTool, askUserTool, };
+import { memoryReadTool, memoryWriteTool } from './memory.js';
+import { lspDiagnosticsTool } from './diagnostics.js';
+import { notebookReadTool, notebookEditTool, notebookRunTool } from './notebook.js';
+export { bashTool, fileReadTool, fileWriteTool, fileEditTool, grepTool, globTool, gitDiffTool, gitLogTool, gitCommitTool, gitBranchTool, gitWorktreeTool, lspDiagnosticsTool, notebookReadTool, notebookEditTool, notebookRunTool, thinkTool, webFetchTool, askUserTool, memoryReadTool, memoryWriteTool, };
 // eslint-disable-next-line @typescript-eslint/no-explicit-any
 export const BUILT_IN_TOOLS = [
     bashTool, fileReadTool, fileWriteTool, fileEditTool,
     grepTool, globTool, gitDiffTool, gitLogTool, gitCommitTool, gitBranchTool,
-    thinkTool, webFetchTool, askUserTool,
+    gitWorktreeTool, lspDiagnosticsTool,
+    notebookReadTool, notebookEditTool, notebookRunTool,
+    thinkTool, webFetchTool, askUserTool, memoryReadTool, memoryWriteTool,
 ];
 export function registerBuiltInTools(registry) {
     for (const tool of BUILT_IN_TOOLS) {

package/dist/src/tools/built-in/index.js.map

@@ -1 +1 @@
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+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../../../src/tools/built-in/index.ts"],"names":[],"mappings":"AAAA;;GAEG;AAIH,OAAO,EAAE,QAAQ,EAAE,MAAM,WAAW,CAAA;AACpC,OAAO,EAAE,YAAY,EAAE,MAAM,gBAAgB,CAAA;AAC7C,OAAO,EAAE,aAAa,EAAE,MAAM,iBAAiB,CAAA;AAC/C,OAAO,EAAE,YAAY,EAAE,MAAM,gBAAgB,CAAA;AAC7C,OAAO,EAAE,QAAQ,EAAE,MAAM,WAAW,CAAA;AACpC,OAAO,EAAE,QAAQ,EAAE,MAAM,WAAW,CAAA;AACpC,OAAO,EAAE,WAAW,EAAE,MAAM,eAAe,CAAA;AAC3C,OAAO,EAAE,UAAU,EAAE,MAAM,cAAc,CAAA;AACzC,OAAO,EAAE,aAAa,EAAE,aAAa,EAAE,MAAM,iBAAiB,CAAA;AAC9D,OAAO,EAAE,eAAe,EAAE,MAAM,mBAAmB,CAAA;AACnD,OAAO,EAAE,SAAS,EAAE,MAAM,YAAY,CAAA;AACtC,OAAO,EAAE,YAAY,EAAE,MAAM,gBAAgB,CAAA;AAC7C,OAAO,EAAE,WAAW,EAAE,MAAM,eAAe,CAAA;AAC3C,OAAO,EAAE,cAAc,EAAE,eAAe,EAAE,MAAM,aAAa,CAAA;AAC7D,OAAO,EAAE,kBAAkB,EAAE,MAAM,kBAAkB,CAAA;AACrD,OAAO,EAAE,gBAAgB,EAAE,gBAAgB,EAAE,eAAe,EAAE,MAAM,eAAe,CAAA;AAEnF,OAAO,EACL,QAAQ,EAAE,YAAY,EAAE,aAAa,EAAE,YAAY,EACnD,QAAQ,EAAE,QAAQ,EAAE,WAAW,EAAE,UAAU,EAAE,aAAa,EAAE,aAAa,EACzE,eAAe,EAAE,kBAAkB,EACnC,gBAAgB,EAAE,gBAAgB,EAAE,eAAe,EACnD,SAAS,EAAE,YAAY,EAAE,WAAW,EAAE,cAAc,EAAE,eAAe,GACtE,CAAA;AAED,8DAA8D;AAC9D,MAAM,CAAC,MAAM,cAAc,GAA0B;IACnD,QAAQ,EAAE,YAAY,EAAE,aAAa,EAAE,YAAY;IACnD,QAAQ,EAAE,QAAQ,EAAE,WAAW,EAAE,UAAU,EAAE,aAAa,EAAE,aAAa;IACzE,eAAe,EAAE,kBAAkB;IACnC,gBAAgB,EAAE,gBAAgB,EAAE,eAAe;IACnD,SAAS,EAAE,YAAY,EAAE,WAAW,EAAE,cAAc,EAAE,eAAe;CACtE,CAAA;AAED,MAAM,UAAU,oBAAoB,CAAC,QAAsB;IACzD,KAAK,MAAM,IAAI,IAAI,cAAc,EAAE,CAAC;QAClC,IAAI,CAAC,QAAQ,CAAC,GAAG,CAAC,IAAI,CAAC,IAAI,CAAC,EAAE,CAAC;YAC7B,QAAQ,CAAC,QAAQ,CAAC,IAAI,CAAC,CAAA;QACzB,CAAC;IACH,CAAC;AACH,CAAC"}

package/dist/src/tools/built-in/memory.d.ts

@@ -0,0 +1,15 @@
+/**
+ * Built-in memory tools — read and write persistent MEMORY.md files.
+ *
+ * Two scopes:
+ *   - project: .cmdr/MEMORY.md — project conventions, build commands, patterns
+ *   - user:    ~/.cmdr/MEMORY.md — personal preferences, global patterns
+ */
+export declare const memoryReadTool: import("../registry.js").ToolDefinition<{
+    scope: "user" | "project";
+}>;
+export declare const memoryWriteTool: import("../registry.js").ToolDefinition<{
+    content: string;
+    scope: "user" | "project";
+}>;
+//# sourceMappingURL=memory.d.ts.map

package/dist/src/tools/built-in/memory.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"memory.d.ts","sourceRoot":"","sources":["../../../../src/tools/built-in/memory.ts"],"names":[],"mappings":"AAAA;;;;;;GAMG;AAKH,eAAO,MAAM,cAAc;;EA4BzB,CAAA;AAEF,eAAO,MAAM,eAAe;;;EA0B1B,CAAA"}

package/dist/src/tools/built-in/memory.js

@@ -0,0 +1,58 @@
+/**
+ * Built-in memory tools — read and write persistent MEMORY.md files.
+ *
+ * Two scopes:
+ *   - project: .cmdr/MEMORY.md — project conventions, build commands, patterns
+ *   - user:    ~/.cmdr/MEMORY.md — personal preferences, global patterns
+ */
+import { z } from 'zod';
+import { defineTool } from '../registry.js';
+export const memoryReadTool = defineTool({
+    name: 'memory_read',
+    description: 'Read persistent memory notes. Scope "project" reads .cmdr/MEMORY.md (repo-specific), ' +
+        'scope "user" reads ~/.cmdr/MEMORY.md (global). Memory persists across sessions.',
+    inputSchema: z.object({
+        scope: z.enum(['project', 'user']).describe('Which memory file to read.'),
+    }),
+    execute: async (input, context) => {
+        try {
+            // MemoryManager is injected via context.metadata
+            const manager = context.metadata?.memoryManager;
+            if (!manager) {
+                return { data: 'Memory system not initialized.', isError: true };
+            }
+            const content = await manager.read(input.scope);
+            if (!content.trim()) {
+                return { data: `No ${input.scope} memory found. Use memory_write to save notes.` };
+            }
+            return { data: content };
+        }
+        catch (err) {
+            return { data: `Failed to read memory: ${err instanceof Error ? err.message : String(err)}`, isError: true };
+        }
+    },
+});
+export const memoryWriteTool = defineTool({
+    name: 'memory_write',
+    description: 'Save notes to persistent memory. Use "project" scope for repo-specific info ' +
+        '(build commands, conventions, architecture notes). Use "user" scope for personal ' +
+        'preferences and global patterns. Content is appended with a date header.',
+    inputSchema: z.object({
+        scope: z.enum(['project', 'user']).describe('Which memory file to write to.'),
+        content: z.string().describe('The note to append to memory. Keep concise — bullet points preferred.'),
+    }),
+    execute: async (input, context) => {
+        try {
+            const manager = context.metadata?.memoryManager;
+            if (!manager) {
+                return { data: 'Memory system not initialized.', isError: true };
+            }
+            await manager.append(input.scope, input.content);
+            return { data: `Saved to ${input.scope} memory.` };
+        }
+        catch (err) {
+            return { data: `Failed to write memory: ${err instanceof Error ? err.message : String(err)}`, isError: true };
+        }
+    },
+});
+//# sourceMappingURL=memory.js.map

package/dist/src/tools/built-in/memory.js.map

@@ -0,0 +1 @@
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package/dist/src/tools/built-in/notebook.d.ts

@@ -0,0 +1,22 @@
+/**
+ * Built-in notebook tool — read, write, and execute Jupyter notebook cells.
+ *
+ * Works with .ipynb files directly, parsing the notebook JSON format.
+ * Execution uses `jupyter nbconvert --execute` or `jupyter run` when available.
+ */
+export declare const notebookReadTool: import("../registry.js").ToolDefinition<{
+    path: string;
+    cell?: number | undefined;
+}>;
+export declare const notebookEditTool: import("../registry.js").ToolDefinition<{
+    path: string;
+    action: "replace" | "insert" | "delete";
+    cell: number;
+    content?: string | undefined;
+    cell_type?: "code" | "markdown" | "raw" | undefined;
+}>;
+export declare const notebookRunTool: import("../registry.js").ToolDefinition<{
+    path: string;
+    cell?: number | undefined;
+}>;
+//# sourceMappingURL=notebook.d.ts.map

package/dist/src/tools/built-in/notebook.d.ts.map

@@ -0,0 +1 @@
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package/dist/src/tools/built-in/notebook.js

@@ -0,0 +1,207 @@
+/**
+ * Built-in notebook tool — read, write, and execute Jupyter notebook cells.
+ *
+ * Works with .ipynb files directly, parsing the notebook JSON format.
+ * Execution uses `jupyter nbconvert --execute` or `jupyter run` when available.
+ */
+import { readFile, writeFile } from 'node:fs/promises';
+import { spawn } from 'node:child_process';
+import { z } from 'zod';
+import { defineTool } from '../registry.js';
+function formatCell(cell, index) {
+    const type = cell.cell_type.toUpperCase();
+    const source = cell.source.join('');
+    const exec = cell.execution_count != null ? ` [${cell.execution_count}]` : '';
+    let output = `--- Cell ${index + 1} (${type})${exec} ---\n${source}`;
+    if (cell.outputs && cell.outputs.length > 0) {
+        const outputTexts = cell.outputs.map((o) => {
+            if (o.text)
+                return (Array.isArray(o.text) ? o.text.join('') : o.text);
+            if (o.data?.['text/plain'])
+                return Array.isArray(o.data['text/plain']) ? o.data['text/plain'].join('') : o.data['text/plain'];
+            if (o.ename)
+                return `${o.ename}: ${o.evalue}`;
+            return '';
+        }).filter(Boolean);
+        if (outputTexts.length > 0) {
+            output += `\n\n>> Output:\n${outputTexts.join('\n')}`;
+        }
+    }
+    return output;
+}
+export const notebookReadTool = defineTool({
+    name: 'notebook_read',
+    description: 'Read a Jupyter notebook (.ipynb) file. Returns cell contents with their types and outputs. ' +
+        'Can read specific cells by index or the entire notebook.',
+    inputSchema: z.object({
+        path: z.string().describe('Path to the .ipynb file.'),
+        cell: z.number().optional().describe('0-based cell index to read. Omit to read all cells.'),
+    }),
+    execute: async (input, context) => {
+        const cwd = context.cwd ?? process.cwd();
+        const fullPath = input.path.startsWith('/') ? input.path : `${cwd}/${input.path}`;
+        try {
+            const raw = await readFile(fullPath, 'utf-8');
+            const nb = JSON.parse(raw);
+            if (input.cell != null) {
+                if (input.cell < 0 || input.cell >= nb.cells.length) {
+                    return { data: `Cell index ${input.cell} out of range (0-${nb.cells.length - 1})`, isError: true };
+                }
+                return { data: formatCell(nb.cells[input.cell], input.cell) };
+            }
+            const kernelMeta = nb.metadata?.kernelspec;
+            const summary = `Notebook: ${nb.cells.length} cells (${kernelMeta?.display_name ?? 'unknown kernel'})\n\n`;
+            const cells = nb.cells.map((c, i) => formatCell(c, i)).join('\n\n');
+            return { data: summary + cells };
+        }
+        catch (err) {
+            return { data: `Failed to read notebook: ${err instanceof Error ? err.message : String(err)}`, isError: true };
+        }
+    },
+});
+export const notebookEditTool = defineTool({
+    name: 'notebook_edit',
+    description: 'Edit a Jupyter notebook cell. Can replace cell content, insert new cells, or delete cells.',
+    inputSchema: z.object({
+        path: z.string().describe('Path to the .ipynb file.'),
+        action: z.enum(['replace', 'insert', 'delete']).describe('Edit action.'),
+        cell: z.number().describe('0-based cell index (for replace/delete) or insertion position (for insert).'),
+        content: z.string().optional().describe('New cell content (for replace/insert).'),
+        cell_type: z.enum(['code', 'markdown', 'raw']).optional().describe('Cell type for insert (default: code).'),
+    }),
+    execute: async (input, context) => {
+        const cwd = context.cwd ?? process.cwd();
+        const fullPath = input.path.startsWith('/') ? input.path : `${cwd}/${input.path}`;
+        try {
+            const raw = await readFile(fullPath, 'utf-8');
+            const nb = JSON.parse(raw);
+            switch (input.action) {
+                case 'replace': {
+                    if (input.cell < 0 || input.cell >= nb.cells.length) {
+                        return { data: `Cell index ${input.cell} out of range`, isError: true };
+                    }
+                    if (!input.content)
+                        return { data: 'content is required for replace', isError: true };
+                    nb.cells[input.cell].source = input.content.split('\n').map((l, i, arr) => i < arr.length - 1 ? l + '\n' : l);
+                    nb.cells[input.cell].outputs = [];
+                    nb.cells[input.cell].execution_count = null;
+                    break;
+                }
+                case 'insert': {
+                    if (input.cell < 0 || input.cell > nb.cells.length) {
+                        return { data: `Insertion position ${input.cell} out of range`, isError: true };
+                    }
+                    const newCell = {
+                        cell_type: input.cell_type ?? 'code',
+                        source: (input.content ?? '').split('\n').map((l, i, arr) => i < arr.length - 1 ? l + '\n' : l),
+                        metadata: {},
+                        outputs: input.cell_type === 'code' || !input.cell_type ? [] : undefined,
+                        execution_count: input.cell_type === 'code' || !input.cell_type ? null : undefined,
+                    };
+                    nb.cells.splice(input.cell, 0, newCell);
+                    break;
+                }
+                case 'delete': {
+                    if (input.cell < 0 || input.cell >= nb.cells.length) {
+                        return { data: `Cell index ${input.cell} out of range`, isError: true };
+                    }
+                    nb.cells.splice(input.cell, 1);
+                    break;
+                }
+            }
+            await writeFile(fullPath, JSON.stringify(nb, null, 1) + '\n', 'utf-8');
+            return { data: `Notebook updated: ${input.action} cell ${input.cell} (${nb.cells.length} cells total)` };
+        }
+        catch (err) {
+            return { data: `Failed to edit notebook: ${err instanceof Error ? err.message : String(err)}`, isError: true };
+        }
+    },
+});
+export const notebookRunTool = defineTool({
+    name: 'notebook_run',
+    description: 'Execute a Jupyter notebook cell or the entire notebook. Requires jupyter to be installed.',
+    inputSchema: z.object({
+        path: z.string().describe('Path to the .ipynb file.'),
+        cell: z.number().optional().describe('0-based cell index to execute. Omit to run entire notebook.'),
+    }),
+    execute: async (input, context) => {
+        const cwd = context.cwd ?? process.cwd();
+        const fullPath = input.path.startsWith('/') ? input.path : `${cwd}/${input.path}`;
+        if (input.cell != null) {
+            // Execute single cell by using jupyter's execute API
+            // Read notebook, extract cell, run with python -c, put output back
+            try {
+                const raw = await readFile(fullPath, 'utf-8');
+                const nb = JSON.parse(raw);
+                const cell = nb.cells[input.cell];
+                if (!cell)
+                    return { data: `Cell ${input.cell} not found`, isError: true };
+                if (cell.cell_type !== 'code')
+                    return { data: `Cell ${input.cell} is not a code cell`, isError: true };
+                const code = cell.source.join('');
+                return new Promise((resolve) => {
+                    const child = spawn('python3', ['-c', code], {
+                        cwd,
+                        stdio: ['ignore', 'pipe', 'pipe'],
+                    });
+                    const out = [];
+                    const err = [];
+                    const timeout = setTimeout(() => {
+                        child.kill();
+                        resolve({ data: 'Cell execution timed out after 30s', isError: true });
+                    }, 30_000);
+                    child.stdout.on('data', (c) => out.push(c));
+                    child.stderr.on('data', (c) => err.push(c));
+                    child.on('close', (exitCode) => {
+                        clearTimeout(timeout);
+                        const stdout = Buffer.concat(out).toString('utf-8').trim();
+                        const stderr = Buffer.concat(err).toString('utf-8').trim();
+                        if (exitCode === 0) {
+                            resolve({ data: stdout || '(no output)' });
+                        }
+                        else {
+                            resolve({ data: stderr || stdout || 'Cell execution failed', isError: true });
+                        }
+                    });
+                    child.on('error', (e) => {
+                        clearTimeout(timeout);
+                        resolve({ data: `Failed to run cell: ${e.message}`, isError: true });
+                    });
+                });
+            }
+            catch (err) {
+                return { data: `Failed: ${err instanceof Error ? err.message : String(err)}`, isError: true };
+            }
+        }
+        // Execute entire notebook
+        return new Promise((resolve) => {
+            const child = spawn('jupyter', [
+                'nbconvert', '--to', 'notebook', '--execute',
+                '--output', fullPath, fullPath,
+            ], { cwd, stdio: ['ignore', 'pipe', 'pipe'] });
+            const out = [];
+            const err = [];
+            const timeout = setTimeout(() => {
+                child.kill();
+                resolve({ data: 'Notebook execution timed out after 120s', isError: true });
+            }, 120_000);
+            child.stdout.on('data', (c) => out.push(c));
+            child.stderr.on('data', (c) => err.push(c));
+            child.on('close', (code) => {
+                clearTimeout(timeout);
+                if (code === 0) {
+                    resolve({ data: `Notebook executed successfully.` });
+                }
+                else {
+                    const stderr = Buffer.concat(err).toString('utf-8').trim();
+                    resolve({ data: stderr || 'Notebook execution failed', isError: true });
+                }
+            });
+            child.on('error', (e) => {
+                clearTimeout(timeout);
+                resolve({ data: `jupyter not found: ${e.message}. Install with: pip install jupyter`, isError: true });
+            });
+        });
+    },
+});
+//# sourceMappingURL=notebook.js.map

package/dist/src/tools/built-in/notebook.js.map

@@ -0,0 +1 @@
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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "cmdr-agent",
-  "version": "2.1.2",
+  "version": "2.2.0",
   "description": "Open-source multi-agent coding tool for your terminal. Powered by Ollama.",
   "type": "module",
   "bin": {