clinicaltrialsgov-mcp-server 2.8.2 → 2.8.3

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Files changed (21) hide show
  1. package/LICENSE +1 -1
  2. package/README.md +1 -1
  3. package/dist/mcp-server/tools/definitions/find-eligible.tool.d.ts.map +1 -1
  4. package/dist/mcp-server/tools/definitions/find-eligible.tool.js +8 -5
  5. package/dist/mcp-server/tools/definitions/find-eligible.tool.js.map +1 -1
  6. package/dist/mcp-server/tools/definitions/get-study-count.tool.d.ts +2 -2
  7. package/dist/mcp-server/tools/definitions/get-study-count.tool.js +8 -8
  8. package/dist/mcp-server/tools/definitions/get-study-count.tool.js.map +1 -1
  9. package/dist/mcp-server/tools/definitions/search-studies.tool.d.ts +12 -2
  10. package/dist/mcp-server/tools/definitions/search-studies.tool.d.ts.map +1 -1
  11. package/dist/mcp-server/tools/definitions/search-studies.tool.js +21 -9
  12. package/dist/mcp-server/tools/definitions/search-studies.tool.js.map +1 -1
  13. package/dist/mcp-server/tools/utils/recovery-hints.d.ts +3 -1
  14. package/dist/mcp-server/tools/utils/recovery-hints.d.ts.map +1 -1
  15. package/dist/mcp-server/tools/utils/recovery-hints.js +3 -1
  16. package/dist/mcp-server/tools/utils/recovery-hints.js.map +1 -1
  17. package/dist/services/clinical-trials/clinical-trials-service.d.ts +15 -0
  18. package/dist/services/clinical-trials/clinical-trials-service.d.ts.map +1 -1
  19. package/dist/services/clinical-trials/clinical-trials-service.js +118 -23
  20. package/dist/services/clinical-trials/clinical-trials-service.js.map +1 -1
  21. package/package.json +6 -6
package/LICENSE CHANGED
@@ -175,7 +175,7 @@
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  END OF TERMS AND CONDITIONS
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- Copyright 2026 Casey Hand
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+ Copyright 2026 Casey Hand @cyanheads
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  Licensed under the Apache License, Version 2.0 (the "License");
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  you may not use this file except in compliance with the License.
package/README.md CHANGED
@@ -7,7 +7,7 @@
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  <div align="center">
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- [![npm](https://img.shields.io/npm/v/clinicaltrialsgov-mcp-server?style=flat-square&logo=npm&logoColor=white)](https://www.npmjs.com/package/clinicaltrialsgov-mcp-server) [![Docker](https://img.shields.io/badge/Docker-ghcr.io-2496ED?style=flat-square&logo=docker&logoColor=white)](https://github.com/users/cyanheads/packages/container/package/clinicaltrialsgov-mcp-server) [![Version](https://img.shields.io/badge/Version-2.8.2-blue.svg?style=flat-square)](./CHANGELOG.md) [![MCP SDK](https://img.shields.io/badge/MCP%20SDK-^1.29.0-green.svg?style=flat-square)](https://modelcontextprotocol.io/) [![License](https://img.shields.io/badge/License-Apache%202.0-orange.svg?style=flat-square)](./LICENSE) [![TypeScript](https://img.shields.io/badge/TypeScript-^6.0-3178C6.svg?style=flat-square)](https://www.typescriptlang.org/) [![Bun](https://img.shields.io/badge/Bun-v1.3.14-blueviolet.svg?style=flat-square)](https://bun.sh/)
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+ [![npm](https://img.shields.io/npm/v/clinicaltrialsgov-mcp-server?style=flat-square&logo=npm&logoColor=white)](https://www.npmjs.com/package/clinicaltrialsgov-mcp-server) [![Docker](https://img.shields.io/badge/Docker-ghcr.io-2496ED?style=flat-square&logo=docker&logoColor=white)](https://github.com/users/cyanheads/packages/container/package/clinicaltrialsgov-mcp-server) [![Version](https://img.shields.io/badge/Version-2.8.3-blue.svg?style=flat-square)](./CHANGELOG.md) [![MCP SDK](https://img.shields.io/badge/MCP%20SDK-^1.29.0-green.svg?style=flat-square)](https://modelcontextprotocol.io/) [![License](https://img.shields.io/badge/License-Apache%202.0-orange.svg?style=flat-square)](./LICENSE) [![TypeScript](https://img.shields.io/badge/TypeScript-^6.0-3178C6.svg?style=flat-square)](https://www.typescriptlang.org/) [![Bun](https://img.shields.io/badge/Bun-v1.3.14-blueviolet.svg?style=flat-square)](https://bun.sh/)
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  </div>
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package/dist/mcp-server/tools/definitions/find-eligible.tool.d.ts.map CHANGED
@@ -1 +1 @@
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package/dist/mcp-server/tools/definitions/find-eligible.tool.js CHANGED
@@ -296,11 +296,14 @@ export const findEligible = tool('clinicaltrials_find_eligible', {
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  age: input.age,
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  sex: input.sex,
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  });
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- // Run the main search and the two funnel-stage counts together. The
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- // service throttles outbound requests at ~1 req/sec, so the calls
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- // serialize at the network layer regardless — Promise.all keeps the code
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- // straight rather than chaining awaits. The extra ~2s is the price of
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- // diagnosing sparse results without a follow-up call.
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+ // Run the main search and the two funnel-stage counts together. The service
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+ // queues outbound requests one per ~1s, so these three leave ~1s apart
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+ // whether written as Promise.all or chained awaits — Promise.all just keeps
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+ // the code straight. That makes the funnel cost a real ~2s on every call,
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+ // paid deliberately: the counts turn "2 matches" into "298 match the
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+ // condition, 4 of those are in this location", which is what tells a caller
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+ // which constraint to relax, and getting it any other way costs two more
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+ // round-trips.
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  const [result, conditionStage, locationStage] = await Promise.all([
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  service.searchStudies({
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  queryCond: conditionQuery,
package/dist/mcp-server/tools/definitions/find-eligible.tool.js.map CHANGED
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package/dist/mcp-server/tools/definitions/get-study-count.tool.d.ts CHANGED
@@ -31,8 +31,8 @@ export declare const getStudyCount: import("@cyanheads/mcp-ts-core").ToolDefinit
31
31
  }, {
32
32
  readonly reason: "query_parse_error";
33
33
  readonly code: JsonRpcErrorCode.ValidationError;
34
- readonly when: "A free-text query or advancedFilter expression uses syntax the upstream Essie parser rejects — typically `[ ]` (AREA[]-reserved) or an unmatched `(` / `)` in a query/conditionQuery/etc. value.";
35
- readonly recovery: "Field-scoped search uses advancedFilter with AREA[FieldName]value (call clinicaltrials_get_field_definitions to look up the right FieldName); free-text fields (query, conditionQuery, etc.) take plain words plus AND, OR, NOT — `[ ]` are reserved (advancedFilter AREA[] only); `( )` group sub-expressions and are safe when matched; `,` acts as AND.";
34
+ readonly when: "A free-text query or advancedFilter expression uses syntax the upstream Essie parser rejects — typically a `[` or `]` outside an AREA[…] / RANGE[…] expression, an unmatched `(` / `)`, or an unterminated quote in a query/conditionQuery/etc. value.";
35
+ readonly recovery: "Field-scoped search uses AREA[FieldName]value, which works in the free-text fields (query, conditionQuery, etc.) as well as in advancedFilter — call clinicaltrials_get_field_definitions to look up the right FieldName. A `[` or `]` outside an AREA[…] / RANGE[…] expression fails; `( )` group sub-expressions and are safe when matched; `,` acts as AND. Free-text fields otherwise take plain words plus AND, OR, NOT.";
36
36
  }, {
37
37
  readonly reason: "rate_limited";
38
38
  readonly code: JsonRpcErrorCode.RateLimited;
package/dist/mcp-server/tools/definitions/get-study-count.tool.js CHANGED
@@ -30,7 +30,7 @@ export const getStudyCount = tool('clinicaltrials_get_study_count', {
30
30
  {
31
31
  reason: 'query_parse_error',
32
32
  code: JsonRpcErrorCode.ValidationError,
33
- when: 'A free-text query or advancedFilter expression uses syntax the upstream Essie parser rejects — typically `[ ]` (AREA[]-reserved) or an unmatched `(` / `)` in a query/conditionQuery/etc. value.',
33
+ when: 'A free-text query or advancedFilter expression uses syntax the upstream Essie parser rejects — typically a `[` or `]` outside an AREA[…] / RANGE[…] expression, an unmatched `(` / `)`, or an unterminated quote in a query/conditionQuery/etc. value.',
34
34
  recovery: RECOVERY_HINTS.query_parse_error,
35
35
  },
36
36
  {
@@ -45,31 +45,31 @@ export const getStudyCount = tool('clinicaltrials_get_study_count', {
45
45
  query: z
46
46
  .string()
47
47
  .optional()
48
- .describe('General free-text search across all fields. Plain words plus AND, OR, NOT. `[ ]` are reserved (advancedFilter AREA[] only); `( )` group sub-expressions and work when matched; `,` acts as AND. For field-scoped searches, use the dedicated *Query parameters (conditionQuery, interventionQuery, etc.) or advancedFilter with AREA[FieldName]value.'),
48
+ .describe('General free-text search across all fields. Plain words plus AND, OR, NOT. `[ ]` are valid only inside an AREA[FieldName]value or RANGE[min, max] expression — those work here as well as in advancedFilter, so AREA[Phase]PHASE2 is accepted in this parameter; a stray bracket fails. `( )` group sub-expressions and work when matched; `,` acts as AND. The dedicated *Query parameters (conditionQuery, interventionQuery, etc.) scope a search to one field.'),
49
49
  conditionQuery: z
50
50
  .string()
51
51
  .optional()
52
- .describe('Condition/disease-specific search. E.g., "Type 2 Diabetes", "non-small cell lung cancer". Plain words plus AND/OR/NOT. `[ ]` are reserved; `( )` group sub-expressions when matched; `,` acts as AND.'),
52
+ .describe('Condition/disease-specific search. E.g., "Type 2 Diabetes", "non-small cell lung cancer". Plain words plus AND/OR/NOT. `[ ]` are valid only inside an AREA[FieldName]value or RANGE[min, max] expression, which this parameter accepts; a stray bracket fails. `( )` group sub-expressions when matched; `,` acts as AND.'),
53
53
  interventionQuery: z
54
54
  .string()
55
55
  .optional()
56
- .describe('Intervention/treatment search. E.g., "pembrolizumab", "cognitive behavioral therapy". Plain words plus AND/OR/NOT. `[ ]` are reserved; `( )` group sub-expressions when matched; `,` acts as AND.'),
56
+ .describe('Intervention/treatment search. E.g., "pembrolizumab", "cognitive behavioral therapy". Plain words plus AND/OR/NOT. `[ ]` are valid only inside an AREA[FieldName]value or RANGE[min, max] expression, which this parameter accepts; a stray bracket fails. `( )` group sub-expressions when matched; `,` acts as AND.'),
57
57
  locationQuery: z
58
58
  .string()
59
59
  .optional()
60
- .describe('Location search — city, state, country, or facility name. Plain words plus AND/OR/NOT. `[ ]` are reserved; `( )` group sub-expressions when matched; `,` acts as AND.'),
60
+ .describe('Location search — city, state, country, or facility name. Plain words plus AND/OR/NOT. `[ ]` are valid only inside an AREA[FieldName]value or RANGE[min, max] expression, which this parameter accepts; a stray bracket fails. `( )` group sub-expressions when matched; `,` acts as AND.'),
61
61
  sponsorQuery: z
62
62
  .string()
63
63
  .optional()
64
- .describe('Sponsor/collaborator name search. Plain words plus AND/OR/NOT. `[ ]` are reserved; `( )` group sub-expressions when matched; `,` acts as AND.'),
64
+ .describe('Sponsor/collaborator name search. Plain words plus AND/OR/NOT. `[ ]` are valid only inside an AREA[FieldName]value or RANGE[min, max] expression, which this parameter accepts; a stray bracket fails. `( )` group sub-expressions when matched; `,` acts as AND.'),
65
65
  titleQuery: z
66
66
  .string()
67
67
  .optional()
68
- .describe('Search within study titles and acronyms only. Plain words plus AND/OR/NOT. `[ ]` are reserved; `( )` group sub-expressions when matched; `,` acts as AND.'),
68
+ .describe('Search within study titles and acronyms only. Plain words plus AND/OR/NOT. `[ ]` are valid only inside an AREA[FieldName]value or RANGE[min, max] expression, which this parameter accepts; a stray bracket fails. `( )` group sub-expressions when matched; `,` acts as AND.'),
69
69
  outcomeQuery: z
70
70
  .string()
71
71
  .optional()
72
- .describe('Search within outcome measure fields. Plain words plus AND/OR/NOT. `[ ]` are reserved; `( )` group sub-expressions when matched; `,` acts as AND.'),
72
+ .describe('Search within outcome measure fields. Plain words plus AND/OR/NOT. `[ ]` are valid only inside an AREA[FieldName]value or RANGE[min, max] expression, which this parameter accepts; a stray bracket fails. `( )` group sub-expressions when matched; `,` acts as AND.'),
73
73
  statusFilter: z
74
74
  .union([
75
75
  z.string().describe('A single status value.'),
package/dist/mcp-server/tools/definitions/get-study-count.tool.js.map CHANGED
@@ -1 +1 @@
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package/dist/mcp-server/tools/definitions/search-studies.tool.d.ts CHANGED
@@ -46,8 +46,18 @@ export declare const searchStudies: import("@cyanheads/mcp-ts-core").ToolDefinit
46
46
  }, {
47
47
  readonly reason: "query_parse_error";
48
48
  readonly code: JsonRpcErrorCode.ValidationError;
49
- readonly when: "A free-text query or advancedFilter expression uses syntax the upstream Essie parser rejects — typically `[ ]` (AREA[]-reserved) or an unmatched `(` / `)` in a query/conditionQuery/etc. value.";
50
- readonly recovery: "Field-scoped search uses advancedFilter with AREA[FieldName]value (call clinicaltrials_get_field_definitions to look up the right FieldName); free-text fields (query, conditionQuery, etc.) take plain words plus AND, OR, NOT — `[ ]` are reserved (advancedFilter AREA[] only); `( )` group sub-expressions and are safe when matched; `,` acts as AND.";
49
+ readonly when: "A free-text query or advancedFilter expression uses syntax the upstream Essie parser rejects — typically a `[` or `]` outside an AREA[…] / RANGE[…] expression, an unmatched `(` / `)`, or an unterminated quote in a query/conditionQuery/etc. value.";
50
+ readonly recovery: "Field-scoped search uses AREA[FieldName]value, which works in the free-text fields (query, conditionQuery, etc.) as well as in advancedFilter — call clinicaltrials_get_field_definitions to look up the right FieldName. A `[` or `]` outside an AREA[…] / RANGE[…] expression fails; `( )` group sub-expressions and are safe when matched; `,` acts as AND. Free-text fields otherwise take plain words plus AND, OR, NOT.";
51
+ }, {
52
+ readonly reason: "geo_invalid";
53
+ readonly code: JsonRpcErrorCode.ValidationError;
54
+ readonly when: "geoFilter is not a well-formed distance(lat,lon,radius) expression.";
55
+ readonly recovery: "Build geoFilter as distance(lat,lon,radius) with a `mi` or `km` suffix on the radius, e.g. distance(47.6062,-122.3321,50mi) — a bare radius is read as meters. Look up the city coordinates first.";
56
+ }, {
57
+ readonly reason: "sort_invalid";
58
+ readonly code: JsonRpcErrorCode.ValidationError;
59
+ readonly when: "sort is not FieldName:asc / FieldName:desc, or names more than 2 fields.";
60
+ readonly recovery: "Set sort to FieldName:asc or FieldName:desc, e.g. LastUpdatePostDate:desc — at most 2 fields, comma-separated. Call clinicaltrials_get_field_definitions to confirm the PascalCase field name.";
51
61
  }, {
52
62
  readonly reason: "rate_limited";
53
63
  readonly code: JsonRpcErrorCode.RateLimited;
package/dist/mcp-server/tools/definitions/search-studies.tool.d.ts.map CHANGED
@@ -1 +1 @@
1
- {"version":3,"file":"search-studies.tool.d.ts","sourceRoot":"","sources":["../../../../src/mcp-server/tools/definitions/search-studies.tool.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,EAAQ,CAAC,EAAE,MAAM,wBAAwB,CAAC;AACjD,OAAO,EAAE,gBAAgB,EAAE,MAAM,+BAA+B,CAAC;AAkPjE,eAAO,MAAM,aAAa;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;EAiVxB,CAAC"}
1
+ {"version":3,"file":"search-studies.tool.d.ts","sourceRoot":"","sources":["../../../../src/mcp-server/tools/definitions/search-studies.tool.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,EAAQ,CAAC,EAAE,MAAM,wBAAwB,CAAC;AACjD,OAAO,EAAE,gBAAgB,EAAE,MAAM,+BAA+B,CAAC;AAkPjE,eAAO,MAAM,aAAa;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;EA6VxB,CAAC"}
package/dist/mcp-server/tools/definitions/search-studies.tool.js CHANGED
@@ -227,9 +227,21 @@ export const searchStudies = tool('clinicaltrials_search_studies', {
227
227
  {
228
228
  reason: 'query_parse_error',
229
229
  code: JsonRpcErrorCode.ValidationError,
230
- when: 'A free-text query or advancedFilter expression uses syntax the upstream Essie parser rejects — typically `[ ]` (AREA[]-reserved) or an unmatched `(` / `)` in a query/conditionQuery/etc. value.',
230
+ when: 'A free-text query or advancedFilter expression uses syntax the upstream Essie parser rejects — typically a `[` or `]` outside an AREA[…] / RANGE[…] expression, an unmatched `(` / `)`, or an unterminated quote in a query/conditionQuery/etc. value.',
231
231
  recovery: RECOVERY_HINTS.query_parse_error,
232
232
  },
233
+ {
234
+ reason: 'geo_invalid',
235
+ code: JsonRpcErrorCode.ValidationError,
236
+ when: 'geoFilter is not a well-formed distance(lat,lon,radius) expression.',
237
+ recovery: RECOVERY_HINTS.geo_invalid,
238
+ },
239
+ {
240
+ reason: 'sort_invalid',
241
+ code: JsonRpcErrorCode.ValidationError,
242
+ when: 'sort is not FieldName:asc / FieldName:desc, or names more than 2 fields.',
243
+ recovery: RECOVERY_HINTS.sort_invalid,
244
+ },
233
245
  {
234
246
  reason: 'rate_limited',
235
247
  code: JsonRpcErrorCode.RateLimited,
@@ -242,31 +254,31 @@ export const searchStudies = tool('clinicaltrials_search_studies', {
242
254
  query: z
243
255
  .string()
244
256
  .optional()
245
- .describe('General free-text search across all fields. Plain words plus AND, OR, NOT. `[ ]` are reserved (advancedFilter AREA[] only); `( )` group sub-expressions and work when matched; `,` acts as AND. For field-scoped searches, use the dedicated *Query parameters (conditionQuery, interventionQuery, etc.) or advancedFilter with AREA[FieldName]value.'),
257
+ .describe('General free-text search across all fields. Plain words plus AND, OR, NOT. `[ ]` are valid only inside an AREA[FieldName]value or RANGE[min, max] expression — those work here as well as in advancedFilter, so AREA[Phase]PHASE2 is accepted in this parameter; a stray bracket fails. `( )` group sub-expressions and work when matched; `,` acts as AND. The dedicated *Query parameters (conditionQuery, interventionQuery, etc.) scope a search to one field.'),
246
258
  conditionQuery: z
247
259
  .string()
248
260
  .optional()
249
- .describe('Condition/disease-specific search. E.g., "Type 2 Diabetes", "non-small cell lung cancer". Plain words plus AND/OR/NOT. `[ ]` are reserved; `( )` group sub-expressions when matched; `,` acts as AND.'),
261
+ .describe('Condition/disease-specific search. E.g., "Type 2 Diabetes", "non-small cell lung cancer". Plain words plus AND/OR/NOT. `[ ]` are valid only inside an AREA[FieldName]value or RANGE[min, max] expression, which this parameter accepts; a stray bracket fails. `( )` group sub-expressions when matched; `,` acts as AND.'),
250
262
  interventionQuery: z
251
263
  .string()
252
264
  .optional()
253
- .describe('Intervention/treatment search. E.g., "pembrolizumab", "cognitive behavioral therapy". Plain words plus AND/OR/NOT. `[ ]` are reserved; `( )` group sub-expressions when matched; `,` acts as AND.'),
265
+ .describe('Intervention/treatment search. E.g., "pembrolizumab", "cognitive behavioral therapy". Plain words plus AND/OR/NOT. `[ ]` are valid only inside an AREA[FieldName]value or RANGE[min, max] expression, which this parameter accepts; a stray bracket fails. `( )` group sub-expressions when matched; `,` acts as AND.'),
254
266
  locationQuery: z
255
267
  .string()
256
268
  .optional()
257
- .describe('Location search — city, state, country, or facility name. Plain words plus AND/OR/NOT. `[ ]` are reserved; `( )` group sub-expressions when matched; `,` acts as AND.'),
269
+ .describe('Location search — city, state, country, or facility name. Plain words plus AND/OR/NOT. `[ ]` are valid only inside an AREA[FieldName]value or RANGE[min, max] expression, which this parameter accepts; a stray bracket fails. `( )` group sub-expressions when matched; `,` acts as AND.'),
258
270
  sponsorQuery: z
259
271
  .string()
260
272
  .optional()
261
- .describe('Sponsor/collaborator name search. Plain words plus AND/OR/NOT. `[ ]` are reserved; `( )` group sub-expressions when matched; `,` acts as AND.'),
273
+ .describe('Sponsor/collaborator name search. Plain words plus AND/OR/NOT. `[ ]` are valid only inside an AREA[FieldName]value or RANGE[min, max] expression, which this parameter accepts; a stray bracket fails. `( )` group sub-expressions when matched; `,` acts as AND.'),
262
274
  titleQuery: z
263
275
  .string()
264
276
  .optional()
265
- .describe('Search within study titles and acronyms only. Plain words plus AND/OR/NOT. `[ ]` are reserved; `( )` group sub-expressions when matched; `,` acts as AND.'),
277
+ .describe('Search within study titles and acronyms only. Plain words plus AND/OR/NOT. `[ ]` are valid only inside an AREA[FieldName]value or RANGE[min, max] expression, which this parameter accepts; a stray bracket fails. `( )` group sub-expressions when matched; `,` acts as AND.'),
266
278
  outcomeQuery: z
267
279
  .string()
268
280
  .optional()
269
- .describe('Search within outcome measure fields. Plain words plus AND/OR/NOT. `[ ]` are reserved; `( )` group sub-expressions when matched; `,` acts as AND.'),
281
+ .describe('Search within outcome measure fields. Plain words plus AND/OR/NOT. `[ ]` are valid only inside an AREA[FieldName]value or RANGE[min, max] expression, which this parameter accepts; a stray bracket fails. `( )` group sub-expressions when matched; `,` acts as AND.'),
270
282
  statusFilter: z
271
283
  .union([
272
284
  z.string().describe('A single status value.'),
@@ -288,7 +300,7 @@ export const searchStudies = tool('clinicaltrials_search_studies', {
288
300
  geoFilter: z
289
301
  .string()
290
302
  .optional()
291
- .describe(`Geographic proximity filter. Format: distance(lat,lon,radius). E.g., "distance(47.6062,-122.3321,50mi)" for studies within 50 miles of Seattle. When set, each study's locations are re-sorted by proximity to the center so the nearest matched site leads, annotated with its distance in miles; the full location list is preserved.`),
303
+ .describe(`Geographic proximity filter. Format: distance(lat,lon,radius), where radius carries a \`mi\` or \`km\` suffix — e.g. "distance(47.6062,-122.3321,50mi)" for studies within 50 miles of Seattle. Always include the suffix: a bare radius is accepted upstream but interpreted as meters, which silently matches almost nothing. When set, each study's locations are re-sorted by proximity to the center so the nearest matched site leads, annotated with its distance in miles; the full location list is preserved.`),
292
304
  nctIds: z
293
305
  .union([
294
306
  nctIdSchema.describe('A single NCT ID.'),
package/dist/mcp-server/tools/definitions/search-studies.tool.js.map CHANGED
@@ -1 +1 @@
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- 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package/dist/mcp-server/tools/utils/recovery-hints.d.ts CHANGED
@@ -11,7 +11,9 @@ export declare const RECOVERY_HINTS: {
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  readonly ids_not_found: "Verify each NCT ID exists at clinicaltrials.gov, or call clinicaltrials_search_studies first to discover valid identifiers.";
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  readonly field_invalid: "Call clinicaltrials_get_field_definitions to browse the field tree; use PascalCase piece names like OverallStatus, Phase, or StudyType.";
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  readonly enum_invalid: "Call clinicaltrials_get_field_values with fields=[\"OverallStatus\"] or fields=[\"Phase\"] to see the valid enum values the filter accepts.";
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- readonly query_parse_error: "Field-scoped search uses advancedFilter with AREA[FieldName]value (call clinicaltrials_get_field_definitions to look up the right FieldName); free-text fields (query, conditionQuery, etc.) take plain words plus AND, OR, NOT — `[ ]` are reserved (advancedFilter AREA[] only); `( )` group sub-expressions and are safe when matched; `,` acts as AND.";
14
+ readonly query_parse_error: "Field-scoped search uses AREA[FieldName]value, which works in the free-text fields (query, conditionQuery, etc.) as well as in advancedFilter — call clinicaltrials_get_field_definitions to look up the right FieldName. A `[` or `]` outside an AREA[…] / RANGE[…] expression fails; `( )` group sub-expressions and are safe when matched; `,` acts as AND. Free-text fields otherwise take plain words plus AND, OR, NOT.";
15
+ readonly geo_invalid: "Build geoFilter as distance(lat,lon,radius) with a `mi` or `km` suffix on the radius, e.g. distance(47.6062,-122.3321,50mi) — a bare radius is read as meters. Look up the city coordinates first.";
16
+ readonly sort_invalid: "Set sort to FieldName:asc or FieldName:desc, e.g. LastUpdatePostDate:desc — at most 2 fields, comma-separated. Call clinicaltrials_get_field_definitions to confirm the PascalCase field name.";
15
17
  readonly path_not_found: "Call clinicaltrials_get_field_definitions with mode=\"search\" and query=\"phase\" (or \"enrollment\") to find a path by concept, or mode=\"overview\" for the top-level sections.";
16
18
  readonly rate_limited: "ClinicalTrials.gov rate-limited the request after several retries; wait about a minute before trying again.";
17
19
  };
package/dist/mcp-server/tools/utils/recovery-hints.d.ts.map CHANGED
@@ -1 +1 @@
1
- {"version":3,"file":"recovery-hints.d.ts","sourceRoot":"","sources":["../../../../src/mcp-server/tools/utils/recovery-hints.ts"],"names":[],"mappings":"AAAA;;;;;;;GAOG;AAEH,eAAO,MAAM,cAAc;;;;;;;;CAejB,CAAC"}
1
+ {"version":3,"file":"recovery-hints.d.ts","sourceRoot":"","sources":["../../../../src/mcp-server/tools/utils/recovery-hints.ts"],"names":[],"mappings":"AAAA;;;;;;;GAOG;AAEH,eAAO,MAAM,cAAc;;;;;;;;;;CAmBjB,CAAC"}
package/dist/mcp-server/tools/utils/recovery-hints.js CHANGED
@@ -11,7 +11,9 @@ export const RECOVERY_HINTS = {
11
11
  ids_not_found: 'Verify each NCT ID exists at clinicaltrials.gov, or call clinicaltrials_search_studies first to discover valid identifiers.',
12
12
  field_invalid: 'Call clinicaltrials_get_field_definitions to browse the field tree; use PascalCase piece names like OverallStatus, Phase, or StudyType.',
13
13
  enum_invalid: 'Call clinicaltrials_get_field_values with fields=["OverallStatus"] or fields=["Phase"] to see the valid enum values the filter accepts.',
14
- query_parse_error: 'Field-scoped search uses advancedFilter with AREA[FieldName]value (call clinicaltrials_get_field_definitions to look up the right FieldName); free-text fields (query, conditionQuery, etc.) take plain words plus AND, OR, NOT — `[ ]` are reserved (advancedFilter AREA[] only); `( )` group sub-expressions and are safe when matched; `,` acts as AND.',
14
+ query_parse_error: 'Field-scoped search uses AREA[FieldName]value, which works in the free-text fields (query, conditionQuery, etc.) as well as in advancedFilter — call clinicaltrials_get_field_definitions to look up the right FieldName. A `[` or `]` outside an AREA[…] / RANGE[…] expression fails; `( )` group sub-expressions and are safe when matched; `,` acts as AND. Free-text fields otherwise take plain words plus AND, OR, NOT.',
15
+ geo_invalid: 'Build geoFilter as distance(lat,lon,radius) with a `mi` or `km` suffix on the radius, e.g. distance(47.6062,-122.3321,50mi) — a bare radius is read as meters. Look up the city coordinates first.',
16
+ sort_invalid: 'Set sort to FieldName:asc or FieldName:desc, e.g. LastUpdatePostDate:desc — at most 2 fields, comma-separated. Call clinicaltrials_get_field_definitions to confirm the PascalCase field name.',
15
17
  path_not_found: 'Call clinicaltrials_get_field_definitions with mode="search" and query="phase" (or "enrollment") to find a path by concept, or mode="overview" for the top-level sections.',
16
18
  rate_limited: 'ClinicalTrials.gov rate-limited the request after several retries; wait about a minute before trying again.',
17
19
  };
package/dist/mcp-server/tools/utils/recovery-hints.js.map CHANGED
@@ -1 +1 @@
1
- {"version":3,"file":"recovery-hints.js","sourceRoot":"","sources":["../../../../src/mcp-server/tools/utils/recovery-hints.ts"],"names":[],"mappings":"AAAA;;;;;;;GAOG;AAEH,MAAM,CAAC,MAAM,cAAc,GAAG;IAC5B,eAAe,EACb,+GAA+G;IACjH,aAAa,EACX,6HAA6H;IAC/H,aAAa,EACX,yIAAyI;IAC3I,YAAY,EACV,yIAAyI;IAC3I,iBAAiB,EACf,4VAA4V;IAC9V,cAAc,EACZ,4KAA4K;IAC9K,YAAY,EACV,6GAA6G;CACvG,CAAC"}
1
+ {"version":3,"file":"recovery-hints.js","sourceRoot":"","sources":["../../../../src/mcp-server/tools/utils/recovery-hints.ts"],"names":[],"mappings":"AAAA;;;;;;;GAOG;AAEH,MAAM,CAAC,MAAM,cAAc,GAAG;IAC5B,eAAe,EACb,+GAA+G;IACjH,aAAa,EACX,6HAA6H;IAC/H,aAAa,EACX,yIAAyI;IAC3I,YAAY,EACV,yIAAyI;IAC3I,iBAAiB,EACf,+ZAA+Z;IACja,WAAW,EACT,oMAAoM;IACtM,YAAY,EACV,gMAAgM;IAClM,cAAc,EACZ,4KAA4K;IAC9K,YAAY,EACV,6GAA6G;CACvG,CAAC"}
package/dist/services/clinical-trials/clinical-trials-service.d.ts CHANGED
@@ -27,6 +27,12 @@ export declare class ClinicalTrialsService {
27
27
  private readonly maxBackoffMs;
28
28
  private readonly validateFieldsLocally;
29
29
  private lastRequestAt;
30
+ /**
31
+ * Tail of the throttle queue. Each caller chains onto it, so concurrent
32
+ * callers reserve distinct slots instead of all sleeping against the same
33
+ * `lastRequestAt` and firing together. See `throttle()`.
34
+ */
35
+ private throttleQueue;
30
36
  private fieldIndexPromise;
31
37
  constructor(config: ServerConfig, options?: ClinicalTrialsServiceOptions);
32
38
  /** Search studies with query, filters, pagination, and field selection. */
@@ -69,6 +75,15 @@ export declare class ClinicalTrialsService {
69
75
  /** Reject invalid field names locally with did-you-mean suggestions. */
70
76
  private validateFields;
71
77
  private buildSearchQuery;
78
+ /**
79
+ * Hold each caller until at least MIN_INTERVAL_MS has passed since the
80
+ * previous request left. Serialization is the point: reading `lastRequestAt`
81
+ * and sleeping against it is not enough, because concurrent callers all read
82
+ * the same value, compute the same wait, and collapse onto one instant. Each
83
+ * caller instead appends to `throttleQueue`, claiming its slot synchronously
84
+ * before it yields, so N callers spread over N intervals no matter how they
85
+ * were initiated (`Promise.all`, separate HTTP sessions, a retry).
86
+ */
72
87
  private throttle;
73
88
  private fetchJson;
74
89
  }
package/dist/services/clinical-trials/clinical-trials-service.d.ts.map CHANGED
@@ -1 +1 @@
1
- {"version":3,"file":"clinical-trials-service.d.ts","sourceRoot":"","sources":["../../../src/services/clinical-trials/clinical-trials-service.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,wBAAwB,CAAC;AAUtD,OAAO,EAAmB,KAAK,YAAY,EAAE,MAAM,2BAA2B,CAAC;AAC/E,OAAO,EACL,KAAK,eAAe,EAIrB,MAAM,mBAAmB,CAAC;AAC3B,OAAO,KAAK,EACV,SAAS,EACT,eAAe,EACf,oBAAoB,EACpB,YAAY,EACZ,KAAK,EACN,MAAM,YAAY,CAAC;AAoCpB,kGAAkG;AAClG,MAAM,WAAW,4BAA4B;IAC3C,aAAa,CAAC,EAAE,MAAM,CAAC;IACvB,YAAY,CAAC,EAAE,MAAM,CAAC;IACtB,UAAU,CAAC,EAAE,MAAM,CAAC;IACpB;;;;OAIG;IACH,qBAAqB,CAAC,EAAE,OAAO,CAAC;CACjC;AAED,qBAAa,qBAAqB;IAChC,OAAO,CAAC,QAAQ,CAAC,OAAO,CAAS;IACjC,OAAO,CAAC,QAAQ,CAAC,SAAS,CAAS;IACnC,OAAO,CAAC,QAAQ,CAAC,WAAW,CAAS;IACrC,OAAO,CAAC,QAAQ,CAAC,UAAU,CAAS;IACpC,OAAO,CAAC,QAAQ,CAAC,aAAa,CAAS;IACvC,OAAO,CAAC,QAAQ,CAAC,YAAY,CAAS;IACtC,OAAO,CAAC,QAAQ,CAAC,qBAAqB,CAAU;IAChD,OAAO,CAAC,aAAa,CAAK;IAC1B,OAAO,CAAC,iBAAiB,CAMX;gBAEF,MAAM,EAAE,YAAY,EAAE,OAAO,GAAE,4BAAiC;IAU5E,2EAA2E;IACrE,aAAa,CAAC,MAAM,EAAE,YAAY,EAAE,GAAG,EAAE,OAAO,GAAG,OAAO,CAAC,oBAAoB,CAAC;IAWtF,sCAAsC;IACtC,QAAQ,CAAC,KAAK,EAAE,MAAM,EAAE,GAAG,EAAE,OAAO,GAAG,OAAO,CAAC,KAAK,CAAC;IAKrD,8GAA8G;IACxG,eAAe,CAAC,MAAM,EAAE,MAAM,EAAE,EAAE,GAAG,EAAE,OAAO,GAAG,OAAO,CAAC,KAAK,EAAE,CAAC;IAevE,iEAAiE;IACjE,WAAW,CAAC,kBAAkB,EAAE,OAAO,EAAE,GAAG,EAAE,OAAO,GAAG,OAAO,CAAC,SAAS,EAAE,CAAC;IAO5E,2DAA2D;IACrD,cAAc,CAAC,MAAM,EAAE,MAAM,EAAE,EAAE,GAAG,EAAE,OAAO,GAAG,OAAO,CAAC,eAAe,EAAE,CAAC;IAgDhF;;;;;;;OAOG;YACW,mBAAmB;IAajC;;;OAGG;IACG,sBAAsB,CAC1B,KAAK,EAAE,MAAM,EACb,KAAK,EAAE,MAAM,EACb,GAAG,EAAE,OAAO,GACX,OAAO,CAAC;QAAE,OAAO,EAAE,eAAe,EAAE,CAAC;QAAC,KAAK,EAAE,MAAM,CAAA;KAAE,CAAC;IAUzD,8EAA8E;IAC9E,OAAO,CAAC,aAAa;IAoCrB;;;;;;OAMG;YACW,eAAe;IAoC7B,wEAAwE;YAC1D,cAAc;IAwC5B,OAAO,CAAC,gBAAgB;YA+BV,QAAQ;YAMR,SAAS;CAoOxB;AAQD,0EAA0E;AAC1E,wBAAgB,yBAAyB,IAAI,IAAI,CAEhD;AAED,2DAA2D;AAC3D,wBAAgB,wBAAwB,IAAI,qBAAqB,CAMhE"}
1
+ {"version":3,"file":"clinical-trials-service.d.ts","sourceRoot":"","sources":["../../../src/services/clinical-trials/clinical-trials-service.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,wBAAwB,CAAC;AAUtD,OAAO,EAAmB,KAAK,YAAY,EAAE,MAAM,2BAA2B,CAAC;AAC/E,OAAO,EACL,KAAK,eAAe,EAIrB,MAAM,mBAAmB,CAAC;AAC3B,OAAO,KAAK,EACV,SAAS,EACT,eAAe,EACf,oBAAoB,EACpB,YAAY,EACZ,KAAK,EACN,MAAM,YAAY,CAAC;AAkHpB,kGAAkG;AAClG,MAAM,WAAW,4BAA4B;IAC3C,aAAa,CAAC,EAAE,MAAM,CAAC;IACvB,YAAY,CAAC,EAAE,MAAM,CAAC;IACtB,UAAU,CAAC,EAAE,MAAM,CAAC;IACpB;;;;OAIG;IACH,qBAAqB,CAAC,EAAE,OAAO,CAAC;CACjC;AAED,qBAAa,qBAAqB;IAChC,OAAO,CAAC,QAAQ,CAAC,OAAO,CAAS;IACjC,OAAO,CAAC,QAAQ,CAAC,SAAS,CAAS;IACnC,OAAO,CAAC,QAAQ,CAAC,WAAW,CAAS;IACrC,OAAO,CAAC,QAAQ,CAAC,UAAU,CAAS;IACpC,OAAO,CAAC,QAAQ,CAAC,aAAa,CAAS;IACvC,OAAO,CAAC,QAAQ,CAAC,YAAY,CAAS;IACtC,OAAO,CAAC,QAAQ,CAAC,qBAAqB,CAAU;IAChD,OAAO,CAAC,aAAa,CAAK;IAC1B;;;;OAIG;IACH,OAAO,CAAC,aAAa,CAAoC;IACzD,OAAO,CAAC,iBAAiB,CAMX;gBAEF,MAAM,EAAE,YAAY,EAAE,OAAO,GAAE,4BAAiC;IAU5E,2EAA2E;IACrE,aAAa,CAAC,MAAM,EAAE,YAAY,EAAE,GAAG,EAAE,OAAO,GAAG,OAAO,CAAC,oBAAoB,CAAC;IAWtF,sCAAsC;IACtC,QAAQ,CAAC,KAAK,EAAE,MAAM,EAAE,GAAG,EAAE,OAAO,GAAG,OAAO,CAAC,KAAK,CAAC;IAKrD,8GAA8G;IACxG,eAAe,CAAC,MAAM,EAAE,MAAM,EAAE,EAAE,GAAG,EAAE,OAAO,GAAG,OAAO,CAAC,KAAK,EAAE,CAAC;IAevE,iEAAiE;IACjE,WAAW,CAAC,kBAAkB,EAAE,OAAO,EAAE,GAAG,EAAE,OAAO,GAAG,OAAO,CAAC,SAAS,EAAE,CAAC;IAO5E,2DAA2D;IACrD,cAAc,CAAC,MAAM,EAAE,MAAM,EAAE,EAAE,GAAG,EAAE,OAAO,GAAG,OAAO,CAAC,eAAe,EAAE,CAAC;IAgDhF;;;;;;;OAOG;YACW,mBAAmB;IAajC;;;OAGG;IACG,sBAAsB,CAC1B,KAAK,EAAE,MAAM,EACb,KAAK,EAAE,MAAM,EACb,GAAG,EAAE,OAAO,GACX,OAAO,CAAC;QAAE,OAAO,EAAE,eAAe,EAAE,CAAC;QAAC,KAAK,EAAE,MAAM,CAAA;KAAE,CAAC;IAUzD,8EAA8E;IAC9E,OAAO,CAAC,aAAa;IAoCrB;;;;;;OAMG;YACW,eAAe;IAoC7B,wEAAwE;YAC1D,cAAc;IAwC5B,OAAO,CAAC,gBAAgB;IA+BxB;;;;;;;;OAQG;IACH,OAAO,CAAC,QAAQ;YAUF,SAAS;CA+OxB;AAQD,0EAA0E;AAC1E,wBAAgB,yBAAyB,IAAI,IAAI,CAEhD;AAED,2DAA2D;AAC3D,wBAAgB,wBAAwB,IAAI,qBAAqB,CAMhE"}
package/dist/services/clinical-trials/clinical-trials-service.js CHANGED
@@ -38,6 +38,75 @@ const KNOWN_FIELD_RENAMES = {
38
38
  recruitmentstatus: 'OverallStatus',
39
39
  recruitingstatus: 'OverallStatus',
40
40
  };
41
+ /**
42
+ * The bracket rule, stated once. `AREA[…]`/`RANGE[…]` expressions are accepted
43
+ * by the free-text query params (`query.term`, `query.cond`, …) exactly as they
44
+ * are by `filter.advanced` — verified against the live API, which returns
45
+ * identical totals for the same expression in either. Only a bracket *outside*
46
+ * such an expression fails, so calling brackets advancedFilter-only would route
47
+ * a working query away from the param it would have worked in.
48
+ */
49
+ const BRACKET_RULE = '`[ ]` are valid only as part of an AREA[FieldName]value or RANGE[min, max] expression, which the free-text params accept as well as advancedFilter; a stray bracket fails.';
50
+ /**
51
+ * Reduce an upstream Essie/ANTLR parse-error body to one actionable sentence.
52
+ *
53
+ * The quoted token means something different in each shape, so extracting "the
54
+ * quoted thing" and calling it the offender misreports several of them:
55
+ *
56
+ * | Upstream shape | Quoted token is |
57
+ * |:--|:--|
58
+ * | `extraneous input 'X' expecting …` | a stray X in the input |
59
+ * | `no viable alternative at input 'X'` | the span that failed to parse |
60
+ * | `token recognition error at: 'X'` | the unparseable literal (e.g. an unterminated quote) |
61
+ * | `mismatched input 'X' expecting 'Y'` | the token found — `<EOF>` means input ran out with Y still due |
62
+ * | `missing 'Y' at 'X'` | the token the parser **wanted**, so Y is the unclosed delimiter |
63
+ *
64
+ * `<EOF>` is a position rather than a token, so it never makes a usable
65
+ * offender. The `expecting {…}` grammar dump is dropped throughout — the token
66
+ * list is noise to a caller. An unrecognized shape keeps the upstream
67
+ * explanation (often specific, e.g. "RANGE is not supported for multiple (7)
68
+ * fields") rather than being replaced by a content-free sentence.
69
+ */
70
+ function describeQueryParseError(text) {
71
+ const tail = 'Free-text fields otherwise take plain words plus AND, OR, NOT.';
72
+ const unclosedNote = "Every '(' needs a matching ')', and an AREA[…] or RANGE[…] expression needs its ']'.";
73
+ // `missing 'Y' at 'X'` quotes what the parser expected, never what the caller
74
+ // typed — reporting Y as the offender names a character absent from the input.
75
+ const missing = text.match(/missing '(.+?)' at /)?.[1];
76
+ if (missing) {
77
+ return `Query syntax error: the query is missing a closing '${missing}'. ${unclosedNote} ${tail}`;
78
+ }
79
+ // Same unclosed-delimiter condition reached by a different rule: input ended
80
+ // while a delimiter was still due.
81
+ if (text.includes("mismatched input '<EOF>'")) {
82
+ const expected = text.match(/mismatched input '<EOF>' expecting '(.+?)'/)?.[1];
83
+ return expected
84
+ ? `Query syntax error: the query ends before its closing '${expected}'. ${unclosedNote} ${tail}`
85
+ : `Query syntax error: the query ends mid-expression, leaving a '(' or '[' unclosed. ${unclosedNote} ${tail}`;
86
+ }
87
+ const offender = text.match(/mismatched input '(.+?)'/)?.[1] ??
88
+ text.match(/extraneous input '(.+?)'/)?.[1] ??
89
+ text.match(/no viable alternative at input '(.+?)'/)?.[1] ??
90
+ text.match(/token recognition error at: '(.+?)'/)?.[1];
91
+ if (offender) {
92
+ // State only the rule the offending token actually violates — leading a
93
+ // stray ')' with the bracket rule reads as a non-sequitur.
94
+ const rule = /[[\]]/.test(offender)
95
+ ? BRACKET_RULE
96
+ : /[()]/.test(offender)
97
+ ? "Parentheses only group sub-expressions and must be matched; a stray '(' or ')' fails."
98
+ : 'Check for an unbalanced quote, bracket, or parenthesis.';
99
+ return `Query syntax error near '${offender}'. ${rule} ${tail}`;
100
+ }
101
+ // Unrecognized shape — preserve whatever upstream said, minus any grammar dump.
102
+ const detail = text
103
+ .replace(/^Error parsing query in [^:]*:\s*/, '')
104
+ .split(/\s*expecting [{(]/)[0]
105
+ ?.trim();
106
+ return detail
107
+ ? `Query syntax error: ${detail}. Free-text fields take plain words plus AND, OR, NOT.`
108
+ : 'Query syntax error: the upstream parser rejected the query. Free-text fields take plain words plus AND, OR, NOT.';
109
+ }
41
110
  export class ClinicalTrialsService {
42
111
  baseUrl;
43
112
  timeoutMs;
@@ -47,6 +116,12 @@ export class ClinicalTrialsService {
47
116
  maxBackoffMs;
48
117
  validateFieldsLocally;
49
118
  lastRequestAt = 0;
119
+ /**
120
+ * Tail of the throttle queue. Each caller chains onto it, so concurrent
121
+ * callers reserve distinct slots instead of all sleeping against the same
122
+ * `lastRequestAt` and firing together. See `throttle()`.
123
+ */
124
+ throttleQueue = Promise.resolve();
50
125
  fieldIndexPromise;
51
126
  constructor(config, options = {}) {
52
127
  this.baseUrl = config.apiBaseUrl;
@@ -325,11 +400,24 @@ export class ClinicalTrialsService {
325
400
  q.pageToken = params.pageToken;
326
401
  return q;
327
402
  }
328
- async throttle() {
329
- const wait = MIN_INTERVAL_MS - (Date.now() - this.lastRequestAt);
330
- if (wait > 0)
331
- await new Promise((r) => setTimeout(r, wait));
332
- this.lastRequestAt = Date.now();
403
+ /**
404
+ * Hold each caller until at least MIN_INTERVAL_MS has passed since the
405
+ * previous request left. Serialization is the point: reading `lastRequestAt`
406
+ * and sleeping against it is not enough, because concurrent callers all read
407
+ * the same value, compute the same wait, and collapse onto one instant. Each
408
+ * caller instead appends to `throttleQueue`, claiming its slot synchronously
409
+ * before it yields, so N callers spread over N intervals no matter how they
410
+ * were initiated (`Promise.all`, separate HTTP sessions, a retry).
411
+ */
412
+ throttle() {
413
+ const slot = this.throttleQueue.then(async () => {
414
+ const wait = MIN_INTERVAL_MS - (Date.now() - this.lastRequestAt);
415
+ if (wait > 0)
416
+ await new Promise((r) => setTimeout(r, wait));
417
+ this.lastRequestAt = Date.now();
418
+ });
419
+ this.throttleQueue = slot;
420
+ return slot;
333
421
  }
334
422
  async fetchJson(path, params, ctx, { jsonFormat = true } = {}) {
335
423
  const url = new URL(`${this.baseUrl}${path}`);
@@ -428,16 +516,30 @@ export class ClinicalTrialsService {
428
516
  const id = path.split('/').pop() ?? path;
429
517
  throw notFound(`Study ${id} not found. Verify the NCT ID exists on ClinicalTrials.gov.`, { reason: 'study_not_found', ...ctx.recoveryFor('study_not_found') });
430
518
  }
431
- // sort param rejection — detected before filter.ids since a malformed
432
- // sort on a non-/studies/ path hits this same branch.
433
- if (params.sort) {
434
- throw validationError(`Invalid value for \`sort\`: '${params.sort}'. Format must be FieldName:asc or FieldName:desc (e.g. "LastUpdatePostDate:desc", "EnrollmentCount:asc"). Max 2 fields comma-separated.`, { reason: 'sort_invalid' });
519
+ // Upstream names the offending parameter in backticks — `Parameter
520
+ // \`filter.geo\` has incorrect format`, `Item 1 in parameter \`sort\`
521
+ // has incorrect format`. Read the name from the body instead of
522
+ // inferring it from which params were sent: a request carrying both a
523
+ // sort and a geoFilter is answered naming only the malformed one, so
524
+ // presence alone blames whichever check runs first. Falls back to
525
+ // presence when the body names nothing.
526
+ const namedParam = text.match(/parameter\s+`([^`]+)`/i)?.[1];
527
+ const blamed = (param) => namedParam === undefined ? params[param] !== undefined : namedParam === param;
528
+ // geoFilter is a hand-built string with a non-obvious shape, so it is
529
+ // the parameter a model most often gets wrong — name the shape rather
530
+ // than echoing the upstream body.
531
+ const geo = params['filter.geo'];
532
+ if (geo && blamed('filter.geo')) {
533
+ throw validationError(`Invalid value for \`geoFilter\`: '${geo}'. Format must be distance(lat,lon,radius) with a \`mi\` or \`km\` suffix on the radius — e.g. "distance(47.6062,-122.3321,50mi)". A bare radius is accepted upstream but read as meters, so it silently matches almost nothing.`, { reason: 'geo_invalid', ...ctx.recoveryFor('geo_invalid') });
534
+ }
535
+ if (params.sort && blamed('sort')) {
536
+ throw validationError(`Invalid value for \`sort\`: '${params.sort}'. Format must be FieldName:asc or FieldName:desc (e.g. "LastUpdatePostDate:desc", "EnrollmentCount:asc"). Max 2 fields comma-separated.`, { reason: 'sort_invalid', ...ctx.recoveryFor('sort_invalid') });
435
537
  }
436
538
  // filter.ids rejection — the API may reject IDs that match the
437
539
  // regex but don't exist (e.g. NCT00000000). Surface the actual
438
540
  // IDs so the caller knows which ones failed.
439
541
  const ids = params['filter.ids'];
440
- if (ids) {
542
+ if (ids && blamed('filter.ids')) {
441
543
  const idList = ids.split('|').join(', ');
442
544
  throw notFound(`Study ID(s) not found or rejected by API: ${idList}. Verify the NCT IDs exist on ClinicalTrials.gov.`, { reason: 'ids_not_found', ...ctx.recoveryFor('ids_not_found') });
443
545
  }
@@ -448,9 +550,9 @@ export class ClinicalTrialsService {
448
550
  // 1. `Unknown area name: \`X\`` — bad field in AREA[X]
449
551
  // 2. `Allowed values for enum field \`<path>\` are \`V1\`, \`V2\`, …` — invalid enum
450
552
  // value in an AREA[Phase] expression (phaseFilter routes through filter.advanced)
451
- // 3. ANTLR syntax errors from a reserved char or unbalanced parens in a free-text
452
- // field — `mismatched input 'X'`, `no viable alternative at input 'X'`, or
453
- // `missing 'X' at …` (the catch-all below; the raw grammar dump is dropped).
553
+ // 3. ANTLR syntax errors from a stray bracket, unbalanced parens, or an
554
+ // unterminated quote in a free-text field — several distinct shapes,
555
+ // each read by describeQueryParseError (the catch-all below).
454
556
  if (text.startsWith('Error parsing query in')) {
455
557
  const areaMatch = text.match(/Unknown area name:\s*`([^`]+)`/);
456
558
  if (areaMatch) {
@@ -474,16 +576,9 @@ export class ClinicalTrialsService {
474
576
  validValues,
475
577
  });
476
578
  }
477
- // ANTLR catch-all: extract the offending token from whichever shape
478
- // matched and drop the `expecting {…}` grammar dump — the token list is
479
- // noise to a caller, so keep only the offender plus the recovery hint.
480
- const offender = text.match(/mismatched input '(.+?)'/)?.[1] ??
481
- text.match(/no viable alternative at input '(.+?)'/)?.[1] ??
482
- text.match(/missing '(.+?)' at /)?.[1];
483
- const conciseMsg = offender
484
- ? `Query syntax error near '${offender}': '[' and ']' are reserved for advancedFilter AREA[] expressions; an unmatched '(' or ')' also fails. Free-text fields take plain words plus AND, OR, NOT.`
485
- : 'Query syntax error: the upstream parser rejected the query. Free-text fields take plain words plus AND, OR, NOT.';
486
- throw validationError(conciseMsg, {
579
+ // ANTLR catch-all — see describeQueryParseError for why each shape
580
+ // needs its own reading of the quoted token.
581
+ throw validationError(describeQueryParseError(text), {
487
582
  reason: 'query_parse_error',
488
583
  ...ctx.recoveryFor('query_parse_error'),
489
584
  });
package/dist/services/clinical-trials/clinical-trials-service.js.map CHANGED
@@ -1 +1 @@
1
- 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package/package.json CHANGED
@@ -1,6 +1,6 @@
1
1
  {
2
2
  "name": "clinicaltrialsgov-mcp-server",
3
- "version": "2.8.2",
3
+ "version": "2.8.3",
4
4
  "mcpName": "io.github.cyanheads/clinicaltrialsgov-mcp-server",
5
5
  "description": "Search ClinicalTrials.gov trials, retrieve study details and results, and match patients to eligible trials via MCP. STDIO or Streamable HTTP.",
6
6
  "main": "dist/index.js",
@@ -101,12 +101,12 @@
101
101
  "node": ">=24.0.0"
102
102
  },
103
103
  "dependencies": {
104
- "@cyanheads/mcp-ts-core": "^0.10.14",
104
+ "@cyanheads/mcp-ts-core": "^0.11.0",
105
105
  "pino-pretty": "^13.1.3",
106
106
  "zod": "^4.4.3"
107
107
  },
108
108
  "devDependencies": {
109
- "@biomejs/biome": "^2.5.3",
109
+ "@biomejs/biome": "^2.5.5",
110
110
  "@cloudflare/workers-types": "4.20260620.1",
111
111
  "@socketsecurity/bun-security-scanner": "^1.1.2",
112
112
  "@types/bun": "^1.3.14",
@@ -114,11 +114,11 @@
114
114
  "@vitest/coverage-istanbul": "^4.1.10",
115
115
  "depcheck": "^1.4.7",
116
116
  "fast-check": "^4.9.0",
117
- "ignore": "^7.0.5",
118
- "tsc-alias": "^1.9.0",
117
+ "ignore": "^7.0.6",
118
+ "tsc-alias": "^1.9.1",
119
119
  "typedoc": "^0.28.20",
120
120
  "typescript": "^6.0.3",
121
- "vite": "^8.1.4",
121
+ "vite": "^8.1.5",
122
122
  "vitest": "^4.1.10"
123
123
  },
124
124
  "publishConfig": {