clinicaltrialsgov-mcp-server 2.7.0 → 2.7.1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/README.md +1 -1
- package/dist/mcp-server/tools/definitions/get-field-values.tool.d.ts.map +1 -1
- package/dist/mcp-server/tools/definitions/get-field-values.tool.js +2 -1
- package/dist/mcp-server/tools/definitions/get-field-values.tool.js.map +1 -1
- package/dist/mcp-server/tools/definitions/get-study-results.tool.d.ts.map +1 -1
- package/dist/mcp-server/tools/definitions/get-study-results.tool.js +2 -1
- package/dist/mcp-server/tools/definitions/get-study-results.tool.js.map +1 -1
- package/dist/mcp-server/tools/utils/query-helpers.d.ts +12 -1
- package/dist/mcp-server/tools/utils/query-helpers.d.ts.map +1 -1
- package/dist/mcp-server/tools/utils/query-helpers.js +15 -2
- package/dist/mcp-server/tools/utils/query-helpers.js.map +1 -1
- package/package.json +3 -3
package/README.md
CHANGED
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@@ -7,7 +7,7 @@
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<div align="center">
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-
[](https://www.npmjs.com/package/clinicaltrialsgov-mcp-server) [](https://github.com/users/cyanheads/packages/container/package/clinicaltrialsgov-mcp-server) [](https://www.npmjs.com/package/clinicaltrialsgov-mcp-server) [](https://github.com/users/cyanheads/packages/container/package/clinicaltrialsgov-mcp-server) [](./CHANGELOG.md) [](https://modelcontextprotocol.io/) [](./LICENSE) [](https://www.typescriptlang.org/) [](https://bun.sh/)
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</div>
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{"version":3,"file":"get-field-values.tool.d.ts","sourceRoot":"","sources":["../../../../src/mcp-server/tools/definitions/get-field-values.tool.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,EAAQ,CAAC,EAAE,MAAM,wBAAwB,CAAC;AACjD,OAAO,EAAE,gBAAgB,EAAE,MAAM,+BAA+B,CAAC;
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{"version":3,"file":"get-field-values.tool.d.ts","sourceRoot":"","sources":["../../../../src/mcp-server/tools/definitions/get-field-values.tool.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,EAAQ,CAAC,EAAE,MAAM,wBAAwB,CAAC;AACjD,OAAO,EAAE,gBAAgB,EAAE,MAAM,+BAA+B,CAAC;AAKjE,eAAO,MAAM,cAAc;;;;;;;;;;;;;;;;;;;;;;;;;;;cAwHzB,CAAC"}
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@@ -5,6 +5,7 @@
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import { tool, z } from '@cyanheads/mcp-ts-core';
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import { JsonRpcErrorCode } from '@cyanheads/mcp-ts-core/errors';
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import { getClinicalTrialsService } from '../../../services/clinical-trials/clinical-trials-service.js';
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import { toArray } from '../utils/query-helpers.js';
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import { RECOVERY_HINTS } from '../utils/recovery-hints.js';
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export const getFieldValues = tool('clinicaltrials_get_field_values', {
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description: `Discover valid values for ClinicalTrials.gov fields with study counts per value. Use to explore available filter options before building a search — e.g., valid OverallStatus, Phase, InterventionType, StudyType, or LeadSponsorClass values.`,
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@@ -72,7 +73,7 @@ export const getFieldValues = tool('clinicaltrials_get_field_values', {
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.describe('One entry per requested field: canonical path, PascalCase piece name, data type, missing/unique counts, and top values with study counts (or trueCount/falseCount for BOOLEAN fields).'),
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}),
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async handler(input, ctx) {
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const fields =
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const fields = toArray(input.fields);
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const service = getClinicalTrialsService();
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const stats = await service.getFieldValues(fields, ctx);
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ctx.log.info('Field values fetched', { fieldCount: stats.length });
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{"version":3,"file":"get-field-values.tool.js","sourceRoot":"","sources":["../../../../src/mcp-server/tools/definitions/get-field-values.tool.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,EAAE,IAAI,EAAE,CAAC,EAAE,MAAM,wBAAwB,CAAC;AACjD,OAAO,EAAE,gBAAgB,EAAE,MAAM,+BAA+B,CAAC;AACjE,OAAO,EAAE,wBAAwB,EAAE,MAAM,uDAAuD,CAAC;AACjG,OAAO,EAAE,OAAO,EAAE,MAAM,2BAA2B,CAAC;AACpD,OAAO,EAAE,cAAc,EAAE,MAAM,4BAA4B,CAAC;AAE5D,MAAM,CAAC,MAAM,cAAc,GAAG,IAAI,CAAC,iCAAiC,EAAE;IACpE,WAAW,EAAE,gPAAgP;IAC7P,WAAW,EAAE;QACX,YAAY,EAAE,IAAI;QAClB,cAAc,EAAE,IAAI;QACpB,aAAa,EAAE,IAAI;KACpB;IAED,MAAM,EAAE;QACN;YACE,MAAM,EAAE,eAAe;YACvB,IAAI,EAAE,gBAAgB,CAAC,eAAe;YACtC,IAAI,EAAE,8DAA8D;YACpE,QAAQ,EAAE,cAAc,CAAC,aAAa;SACvC;QACD;YACE,MAAM,EAAE,cAAc;YACtB,IAAI,EAAE,gBAAgB,CAAC,WAAW;YAClC,IAAI,EAAE,+DAA+D;YACrE,QAAQ,EAAE,cAAc,CAAC,YAAY;YACrC,SAAS,EAAE,IAAI;SAChB;KACF;IAED,KAAK,EAAE,CAAC,CAAC,MAAM,CAAC;QACd,MAAM,EAAE,CAAC;aACN,KAAK,CAAC;YACL,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,CAAC,iCAAiC,CAAC;YACtD,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,MAAM,EAAE,CAAC,CAAC,QAAQ,CAAC,kCAAkC,CAAC;SACjE,CAAC;aACD,QAAQ,CACP,yMAAyM,CAC1M;KACJ,CAAC;IAEF,MAAM,EAAE,CAAC,CAAC,MAAM,CAAC;QACf,UAAU,EAAE,CAAC;aACV,KAAK,CACJ,CAAC;aACE,MAAM,CAAC;YACN,KAAK,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,CAAC,+BAA+B,CAAC;YAC3D,KAAK,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,CAAC,wBAAwB,CAAC;YACpD,IAAI,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,CAAC,sDAAsD,CAAC;YACjF,mBAAmB,EAAE,CAAC;iBACnB,MAAM,EAAE;iBACR,QAAQ,EAAE;iBACV,QAAQ,CAAC,+CAA+C,CAAC;YAC5D,uBAAuB;YACvB,iBAAiB,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,EAAE,CAAC,QAAQ,CAAC,4BAA4B,CAAC;YAC/E,SAAS,EAAE,CAAC;iBACT,KAAK,CACJ,CAAC;iBACE,MAAM,CAAC;gBACN,KAAK,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,CAAC,cAAc,CAAC;gBAC1C,YAAY,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,CAAC,oCAAoC,CAAC;aACxE,CAAC;iBACD,QAAQ,CAAC,8BAA8B,CAAC,CAC5C;iBACA,QAAQ,EAAE;iBACV,QAAQ,CACP,wFAAwF,CACzF;YACH,iBAAiB;YACjB,SAAS,EAAE,CAAC;iBACT,MAAM,EAAE;iBACR,QAAQ,EAAE;iBACV,QAAQ,CAAC,0DAA0D,CAAC;YACvE,UAAU,EAAE,CAAC;iBACV,MAAM,EAAE;iBACR,QAAQ,EAAE;iBACV,QAAQ,CAAC,2DAA2D,CAAC;SACzE,CAAC;aACD,QAAQ,CAAC,0CAA0C,CAAC,CACxD;aACA,QAAQ,CACP,wLAAwL,CACzL;KACJ,CAAC;IAEF,KAAK,CAAC,OAAO,CAAC,KAAK,EAAE,GAAG;QACtB,MAAM,MAAM,GAAG,OAAO,CAAC,KAAK,CAAC,MAAM,CAAC,CAAC;QACrC,MAAM,OAAO,GAAG,wBAAwB,EAAE,CAAC;QAC3C,MAAM,KAAK,GAAG,MAAM,OAAO,CAAC,cAAc,CAAC,MAAM,EAAE,GAAG,CAAC,CAAC;QACxD,GAAG,CAAC,GAAG,CAAC,IAAI,CAAC,sBAAsB,EAAE,EAAE,UAAU,EAAE,KAAK,CAAC,MAAM,EAAE,CAAC,CAAC;QACnE,OAAO,EAAE,UAAU,EAAE,KAAK,EAAE,CAAC;IAC/B,CAAC;IAED,MAAM,EAAE,CAAC,MAAM,EAAE,EAAE;QACjB,MAAM,KAAK,GAAa,EAAE,CAAC;QAC3B,KAAK,MAAM,IAAI,IAAI,MAAM,CAAC,UAAU,EAAE,CAAC;YACrC,MAAM,MAAM,GACV,IAAI,CAAC,IAAI,KAAK,SAAS;gBACrB,CAAC,CAAC,KAAK,IAAI,CAAC,KAAK,QAAQ,IAAI,CAAC,KAAK,aAAa;gBAChD,CAAC,CAAC,KAAK,IAAI,CAAC,KAAK,QAAQ,IAAI,CAAC,KAAK,KAAK,IAAI,CAAC,IAAI,KAAK,IAAI,CAAC,iBAAiB,IAAI,GAAG,kBAAkB,CAAC;YAC1G,KAAK,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC;YACnB,IAAI,IAAI,CAAC,SAAS,IAAI,IAAI;gBAAE,KAAK,CAAC,IAAI,CAAC,WAAW,IAAI,CAAC,SAAS,UAAU,CAAC,CAAC;YAC5E,IAAI,IAAI,CAAC,UAAU,IAAI,IAAI;gBAAE,KAAK,CAAC,IAAI,CAAC,YAAY,IAAI,CAAC,UAAU,UAAU,CAAC,CAAC;YAC/E,MAAM,SAAS,GAAG,IAAI,CAAC,SAAS,IAAI,EAAE,CAAC;YACvC,IAAI,IAAI,CAAC,IAAI,KAAK,SAAS,EAAE,CAAC;gBAC5B,IAAI,SAAS,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;oBAC3B,KAAK,CAAC,IAAI,CAAC,sCAAsC,CAAC,CAAC;gBACrD,CAAC;qBAAM,CAAC;oBACN,MAAM,KAAK,GAAG,SAAS,CAAC,KAAK,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC;oBACrC,KAAK,MAAM,EAAE,IAAI,KAAK,EAAE,CAAC;wBACvB,KAAK,CAAC,IAAI,CAAC,KAAK,EAAE,CAAC,KAAK,KAAK,EAAE,CAAC,YAAY,UAAU,CAAC,CAAC;oBAC1D,CAAC;oBACD,IAAI,SAAS,CAAC,MAAM,GAAG,KAAK,CAAC,MAAM,EAAE,CAAC;wBACpC,MAAM,SAAS,GAAG,SAAS,CAAC,MAAM,GAAG,KAAK,CAAC,MAAM,CAAC;wBAClD,MAAM,MAAM,GAAG,IAAI,CAAC,iBAAiB,CAAC;wBACtC,KAAK,CAAC,IAAI,CACR,WAAW,SAAS,QAAQ,MAAM,IAAI,IAAI,CAAC,CAAC,CAAC,QAAQ,MAAM,mCAAmC,CAAC,CAAC,CAAC,EAAE,EAAE,CACtG,CAAC;oBACJ,CAAC;gBACH,CAAC;YACH,CAAC;YACD,IAAI,IAAI,CAAC,mBAAmB,IAAI,IAAI,IAAI,IAAI,CAAC,mBAAmB,GAAG,CAAC;gBAClE,KAAK,CAAC,IAAI,CAAC,iBAAiB,IAAI,CAAC,mBAAmB,WAAW,CAAC,CAAC;QACrE,CAAC;QACD,OAAO,CAAC,EAAE,IAAI,EAAE,MAAM,EAAE,IAAI,EAAE,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IACpD,CAAC;CACF,CAAC,CAAC"}
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{"version":3,"file":"get-study-results.tool.d.ts","sourceRoot":"","sources":["../../../../src/mcp-server/tools/definitions/get-study-results.tool.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,EAAQ,CAAC,EAAE,MAAM,wBAAwB,CAAC;AACjD,OAAO,EAAE,gBAAgB,EAAE,MAAM,+BAA+B,CAAC;
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{"version":3,"file":"get-study-results.tool.d.ts","sourceRoot":"","sources":["../../../../src/mcp-server/tools/definitions/get-study-results.tool.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,EAAQ,CAAC,EAAE,MAAM,wBAAwB,CAAC;AACjD,OAAO,EAAE,gBAAgB,EAAE,MAAM,+BAA+B,CAAC;AAwcjE,eAAO,MAAM,eAAe;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;cAoP1B,CAAC"}
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import { getClinicalTrialsService } from '../../../services/clinical-trials/clinical-trials-service.js';
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import { nctIdSchema } from '../utils/_schemas.js';
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import { RECOVERY_HINTS } from '../utils/recovery-hints.js';
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const VALID_SECTIONS = [
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1
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|
|
@@ -2,7 +2,18 @@
|
|
|
2
2
|
* @fileoverview Shared helpers for normalizing tool inputs into API search parameters.
|
|
3
3
|
* @module mcp-server/tools/definitions/query-helpers
|
|
4
4
|
*/
|
|
5
|
-
/**
|
|
5
|
+
/**
|
|
6
|
+
* Normalize `string | string[]` to `string[]`.
|
|
7
|
+
*
|
|
8
|
+
* LLM callers intermittently serialize array arguments as JSON strings
|
|
9
|
+
* (`'["RECRUITING","COMPLETED"]'` rather than `["RECRUITING","COMPLETED"]`). A
|
|
10
|
+
* `[`-leading string that `JSON.parse`s to an all-string array is unwrapped to
|
|
11
|
+
* that array. Every legitimate scalar this normalizes (status/phase enums, NCT
|
|
12
|
+
* IDs, PascalCase field names) starts with a letter, so a `[`-leading string is
|
|
13
|
+
* always either a stringified array or garbage — and garbage falls through to
|
|
14
|
+
* the scalar-wrap, preserving the prior behavior.
|
|
15
|
+
*/
|
|
16
|
+
export declare function toArray(v: string | string[]): string[];
|
|
6
17
|
export declare function toArray(v: string | string[] | undefined): string[] | undefined;
|
|
7
18
|
/** Build AREA[] phase filter and combine with user's advancedFilter. */
|
|
8
19
|
export declare function buildAdvancedFilter(phaseFilter?: string[], advancedFilter?: string): string | undefined;
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"query-helpers.d.ts","sourceRoot":"","sources":["../../../../src/mcp-server/tools/utils/query-helpers.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH
|
|
1
|
+
{"version":3,"file":"query-helpers.d.ts","sourceRoot":"","sources":["../../../../src/mcp-server/tools/utils/query-helpers.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH;;;;;;;;;;GAUG;AACH,wBAAgB,OAAO,CAAC,CAAC,EAAE,MAAM,GAAG,MAAM,EAAE,GAAG,MAAM,EAAE,CAAC;AACxD,wBAAgB,OAAO,CAAC,CAAC,EAAE,MAAM,GAAG,MAAM,EAAE,GAAG,SAAS,GAAG,MAAM,EAAE,GAAG,SAAS,CAAC;AAkBhF,wEAAwE;AACxE,wBAAgB,mBAAmB,CACjC,WAAW,CAAC,EAAE,MAAM,EAAE,EACtB,cAAc,CAAC,EAAE,MAAM,GACtB,MAAM,GAAG,SAAS,CAWpB"}
|
|
@@ -2,11 +2,24 @@
|
|
|
2
2
|
* @fileoverview Shared helpers for normalizing tool inputs into API search parameters.
|
|
3
3
|
* @module mcp-server/tools/definitions/query-helpers
|
|
4
4
|
*/
|
|
5
|
-
/** Normalize string | string[] to string[]. */
|
|
6
5
|
export function toArray(v) {
|
|
7
6
|
if (v === undefined)
|
|
8
7
|
return;
|
|
9
|
-
|
|
8
|
+
if (Array.isArray(v))
|
|
9
|
+
return v;
|
|
10
|
+
const trimmed = v.trim();
|
|
11
|
+
if (trimmed.startsWith('[')) {
|
|
12
|
+
try {
|
|
13
|
+
const parsed = JSON.parse(trimmed);
|
|
14
|
+
if (Array.isArray(parsed) && parsed.every((x) => typeof x === 'string')) {
|
|
15
|
+
return parsed;
|
|
16
|
+
}
|
|
17
|
+
}
|
|
18
|
+
catch {
|
|
19
|
+
// Not valid JSON — fall through to the scalar-wrap (unchanged behavior).
|
|
20
|
+
}
|
|
21
|
+
}
|
|
22
|
+
return [v];
|
|
10
23
|
}
|
|
11
24
|
/** Build AREA[] phase filter and combine with user's advancedFilter. */
|
|
12
25
|
export function buildAdvancedFilter(phaseFilter, advancedFilter) {
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"query-helpers.js","sourceRoot":"","sources":["../../../../src/mcp-server/tools/utils/query-helpers.ts"],"names":[],"mappings":"AAAA;;;GAGG;
|
|
1
|
+
{"version":3,"file":"query-helpers.js","sourceRoot":"","sources":["../../../../src/mcp-server/tools/utils/query-helpers.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAeH,MAAM,UAAU,OAAO,CAAC,CAAgC;IACtD,IAAI,CAAC,KAAK,SAAS;QAAE,OAAO;IAC5B,IAAI,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;QAAE,OAAO,CAAC,CAAC;IAC/B,MAAM,OAAO,GAAG,CAAC,CAAC,IAAI,EAAE,CAAC;IACzB,IAAI,OAAO,CAAC,UAAU,CAAC,GAAG,CAAC,EAAE,CAAC;QAC5B,IAAI,CAAC;YACH,MAAM,MAAM,GAAY,IAAI,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC;YAC5C,IAAI,KAAK,CAAC,OAAO,CAAC,MAAM,CAAC,IAAI,MAAM,CAAC,KAAK,CAAC,CAAC,CAAC,EAAe,EAAE,CAAC,OAAO,CAAC,KAAK,QAAQ,CAAC,EAAE,CAAC;gBACrF,OAAO,MAAM,CAAC;YAChB,CAAC;QACH,CAAC;QAAC,MAAM,CAAC;YACP,yEAAyE;QAC3E,CAAC;IACH,CAAC;IACD,OAAO,CAAC,CAAC,CAAC,CAAC;AACb,CAAC;AAED,wEAAwE;AACxE,MAAM,UAAU,mBAAmB,CACjC,WAAsB,EACtB,cAAuB;IAEvB,MAAM,KAAK,GAAa,EAAE,CAAC;IAC3B,IAAI,WAAW,EAAE,MAAM,EAAE,CAAC;QACxB,MAAM,IAAI,GACR,WAAW,CAAC,MAAM,KAAK,CAAC;YACtB,CAAC,CAAC,cAAc,WAAW,CAAC,CAAC,CAAC,EAAE;YAChC,CAAC,CAAC,IAAI,WAAW,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,cAAc,CAAC,EAAE,CAAC,CAAC,IAAI,CAAC,MAAM,CAAC,GAAG,CAAC;QACpE,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;IACnB,CAAC;IACD,IAAI,cAAc;QAAE,KAAK,CAAC,IAAI,CAAC,cAAc,CAAC,CAAC;IAC/C,OAAO,KAAK,CAAC,MAAM,GAAG,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC,SAAS,CAAC;AAC5D,CAAC"}
|
package/package.json
CHANGED
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
{
|
|
2
2
|
"name": "clinicaltrialsgov-mcp-server",
|
|
3
|
-
"version": "2.7.
|
|
3
|
+
"version": "2.7.1",
|
|
4
4
|
"mcpName": "io.github.cyanheads/clinicaltrialsgov-mcp-server",
|
|
5
5
|
"description": "Search ClinicalTrials.gov trials, retrieve study details and results, and match patients to eligible trials via MCP. STDIO or Streamable HTTP.",
|
|
6
6
|
"main": "dist/index.js",
|
|
@@ -106,8 +106,8 @@
|
|
|
106
106
|
"zod": "^4.4.3"
|
|
107
107
|
},
|
|
108
108
|
"devDependencies": {
|
|
109
|
-
"@biomejs/biome": "^2.
|
|
110
|
-
"@cloudflare/workers-types": "4.
|
|
109
|
+
"@biomejs/biome": "^2.5.0",
|
|
110
|
+
"@cloudflare/workers-types": "4.20260613.1",
|
|
111
111
|
"@types/bun": "^1.3.14",
|
|
112
112
|
"@types/node": "25.9.3",
|
|
113
113
|
"@vitest/coverage-istanbul": "^4.1.8",
|