clavix 4.11.2 → 5.0.0

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Files changed (162) hide show
  1. package/README.md +72 -60
  2. package/dist/cli/commands/update.js +9 -10
  3. package/dist/templates/agents/agents.md +14 -8
  4. package/dist/templates/agents/copilot-instructions.md +1 -1
  5. package/dist/templates/instructions/core/verification.md +2 -2
  6. package/dist/templates/slash-commands/_canonical/archive.md +83 -121
  7. package/dist/templates/slash-commands/_canonical/execute.md +32 -42
  8. package/dist/templates/slash-commands/_canonical/implement.md +32 -44
  9. package/dist/templates/slash-commands/_canonical/improve.md +14 -53
  10. package/dist/templates/slash-commands/_canonical/start.md +1 -1
  11. package/dist/templates/slash-commands/_canonical/summarize.md +8 -8
  12. package/dist/templates/slash-commands/_components/agent-protocols/cli-reference.md +84 -180
  13. package/dist/templates/slash-commands/_components/agent-protocols/error-handling.md +2 -2
  14. package/dist/templates/slash-commands/_components/agent-protocols/file-formats.md +41 -59
  15. package/dist/templates/slash-commands/_components/agent-protocols/state-assertion.md +1 -1
  16. package/dist/templates/slash-commands/_components/references/intent-types.md +1 -1
  17. package/dist/templates/slash-commands/_components/sections/file-saving-protocol.md +20 -27
  18. package/dist/templates/slash-commands/_components/sections/pattern-visibility.md +29 -46
  19. package/dist/templates/slash-commands/_components/troubleshooting/file-not-saved.md +4 -5
  20. package/dist/types/config.d.ts +57 -0
  21. package/dist/utils/legacy-command-cleanup.js +31 -4
  22. package/package.json +5 -4
  23. package/dist/cli/commands/analyze.d.ts +0 -17
  24. package/dist/cli/commands/analyze.js +0 -133
  25. package/dist/cli/commands/archive.d.ts +0 -36
  26. package/dist/cli/commands/archive.js +0 -266
  27. package/dist/cli/commands/deep.d.ts +0 -17
  28. package/dist/cli/commands/deep.js +0 -170
  29. package/dist/cli/commands/execute.d.ts +0 -15
  30. package/dist/cli/commands/execute.js +0 -168
  31. package/dist/cli/commands/fast.d.ts +0 -18
  32. package/dist/cli/commands/fast.js +0 -219
  33. package/dist/cli/commands/implement.d.ts +0 -24
  34. package/dist/cli/commands/implement.js +0 -289
  35. package/dist/cli/commands/improve.d.ts +0 -32
  36. package/dist/cli/commands/improve.js +0 -250
  37. package/dist/cli/commands/list.d.ts +0 -17
  38. package/dist/cli/commands/list.js +0 -217
  39. package/dist/cli/commands/plan.d.ts +0 -21
  40. package/dist/cli/commands/plan.js +0 -297
  41. package/dist/cli/commands/prd.d.ts +0 -24
  42. package/dist/cli/commands/prd.js +0 -321
  43. package/dist/cli/commands/prompts/clear.d.ts +0 -16
  44. package/dist/cli/commands/prompts/clear.js +0 -222
  45. package/dist/cli/commands/prompts/list.d.ts +0 -8
  46. package/dist/cli/commands/prompts/list.js +0 -88
  47. package/dist/cli/commands/show.d.ts +0 -21
  48. package/dist/cli/commands/show.js +0 -191
  49. package/dist/cli/commands/start.d.ts +0 -40
  50. package/dist/cli/commands/start.js +0 -210
  51. package/dist/cli/commands/summarize.d.ts +0 -17
  52. package/dist/cli/commands/summarize.js +0 -196
  53. package/dist/cli/commands/task-complete.d.ts +0 -27
  54. package/dist/cli/commands/task-complete.js +0 -269
  55. package/dist/cli/commands/verify.d.ts +0 -28
  56. package/dist/cli/commands/verify.js +0 -349
  57. package/dist/core/archive-manager.d.ts +0 -100
  58. package/dist/core/archive-manager.js +0 -302
  59. package/dist/core/basic-checklist-generator.d.ts +0 -35
  60. package/dist/core/basic-checklist-generator.js +0 -344
  61. package/dist/core/checklist-parser.d.ts +0 -48
  62. package/dist/core/checklist-parser.js +0 -238
  63. package/dist/core/config-manager.d.ts +0 -149
  64. package/dist/core/config-manager.js +0 -230
  65. package/dist/core/conversation-analyzer.d.ts +0 -86
  66. package/dist/core/conversation-analyzer.js +0 -387
  67. package/dist/core/conversation-quality-tracker.d.ts +0 -81
  68. package/dist/core/conversation-quality-tracker.js +0 -195
  69. package/dist/core/git-manager.d.ts +0 -126
  70. package/dist/core/git-manager.js +0 -282
  71. package/dist/core/intelligence/confidence-calculator.d.ts +0 -93
  72. package/dist/core/intelligence/confidence-calculator.js +0 -124
  73. package/dist/core/intelligence/index.d.ts +0 -11
  74. package/dist/core/intelligence/index.js +0 -15
  75. package/dist/core/intelligence/intent-detector.d.ts +0 -54
  76. package/dist/core/intelligence/intent-detector.js +0 -723
  77. package/dist/core/intelligence/pattern-library.d.ts +0 -104
  78. package/dist/core/intelligence/pattern-library.js +0 -339
  79. package/dist/core/intelligence/patterns/actionability-enhancer.d.ts +0 -27
  80. package/dist/core/intelligence/patterns/actionability-enhancer.js +0 -192
  81. package/dist/core/intelligence/patterns/alternative-phrasing-generator.d.ts +0 -29
  82. package/dist/core/intelligence/patterns/alternative-phrasing-generator.js +0 -239
  83. package/dist/core/intelligence/patterns/ambiguity-detector.d.ts +0 -22
  84. package/dist/core/intelligence/patterns/ambiguity-detector.js +0 -196
  85. package/dist/core/intelligence/patterns/assumption-explicitizer.d.ts +0 -30
  86. package/dist/core/intelligence/patterns/assumption-explicitizer.js +0 -296
  87. package/dist/core/intelligence/patterns/base-pattern.d.ts +0 -192
  88. package/dist/core/intelligence/patterns/base-pattern.js +0 -103
  89. package/dist/core/intelligence/patterns/completeness-validator.d.ts +0 -27
  90. package/dist/core/intelligence/patterns/completeness-validator.js +0 -221
  91. package/dist/core/intelligence/patterns/conciseness-filter.d.ts +0 -20
  92. package/dist/core/intelligence/patterns/conciseness-filter.js +0 -92
  93. package/dist/core/intelligence/patterns/context-precision.d.ts +0 -32
  94. package/dist/core/intelligence/patterns/context-precision.js +0 -389
  95. package/dist/core/intelligence/patterns/conversation-summarizer.d.ts +0 -30
  96. package/dist/core/intelligence/patterns/conversation-summarizer.js +0 -277
  97. package/dist/core/intelligence/patterns/dependency-identifier.d.ts +0 -23
  98. package/dist/core/intelligence/patterns/dependency-identifier.js +0 -166
  99. package/dist/core/intelligence/patterns/domain-context-enricher.d.ts +0 -21
  100. package/dist/core/intelligence/patterns/domain-context-enricher.js +0 -198
  101. package/dist/core/intelligence/patterns/edge-case-identifier.d.ts +0 -30
  102. package/dist/core/intelligence/patterns/edge-case-identifier.js +0 -269
  103. package/dist/core/intelligence/patterns/error-tolerance-enhancer.d.ts +0 -22
  104. package/dist/core/intelligence/patterns/error-tolerance-enhancer.js +0 -179
  105. package/dist/core/intelligence/patterns/implicit-requirement-extractor.d.ts +0 -24
  106. package/dist/core/intelligence/patterns/implicit-requirement-extractor.js +0 -259
  107. package/dist/core/intelligence/patterns/objective-clarifier.d.ts +0 -22
  108. package/dist/core/intelligence/patterns/objective-clarifier.js +0 -126
  109. package/dist/core/intelligence/patterns/output-format-enforcer.d.ts +0 -22
  110. package/dist/core/intelligence/patterns/output-format-enforcer.js +0 -151
  111. package/dist/core/intelligence/patterns/prd-structure-enforcer.d.ts +0 -23
  112. package/dist/core/intelligence/patterns/prd-structure-enforcer.js +0 -183
  113. package/dist/core/intelligence/patterns/prerequisite-identifier.d.ts +0 -23
  114. package/dist/core/intelligence/patterns/prerequisite-identifier.js +0 -221
  115. package/dist/core/intelligence/patterns/requirement-prioritizer.d.ts +0 -24
  116. package/dist/core/intelligence/patterns/requirement-prioritizer.js +0 -134
  117. package/dist/core/intelligence/patterns/scope-definer.d.ts +0 -26
  118. package/dist/core/intelligence/patterns/scope-definer.js +0 -236
  119. package/dist/core/intelligence/patterns/step-decomposer.d.ts +0 -31
  120. package/dist/core/intelligence/patterns/step-decomposer.js +0 -242
  121. package/dist/core/intelligence/patterns/structure-organizer.d.ts +0 -31
  122. package/dist/core/intelligence/patterns/structure-organizer.js +0 -218
  123. package/dist/core/intelligence/patterns/success-criteria-enforcer.d.ts +0 -22
  124. package/dist/core/intelligence/patterns/success-criteria-enforcer.js +0 -165
  125. package/dist/core/intelligence/patterns/success-metrics-enforcer.d.ts +0 -24
  126. package/dist/core/intelligence/patterns/success-metrics-enforcer.js +0 -165
  127. package/dist/core/intelligence/patterns/technical-context-enricher.d.ts +0 -25
  128. package/dist/core/intelligence/patterns/technical-context-enricher.js +0 -165
  129. package/dist/core/intelligence/patterns/topic-coherence-analyzer.d.ts +0 -26
  130. package/dist/core/intelligence/patterns/topic-coherence-analyzer.js +0 -300
  131. package/dist/core/intelligence/patterns/user-persona-enricher.d.ts +0 -24
  132. package/dist/core/intelligence/patterns/user-persona-enricher.js +0 -141
  133. package/dist/core/intelligence/patterns/validation-checklist-creator.d.ts +0 -31
  134. package/dist/core/intelligence/patterns/validation-checklist-creator.js +0 -242
  135. package/dist/core/intelligence/quality-assessor.d.ts +0 -51
  136. package/dist/core/intelligence/quality-assessor.js +0 -505
  137. package/dist/core/intelligence/types.d.ts +0 -111
  138. package/dist/core/intelligence/types.js +0 -3
  139. package/dist/core/intelligence/universal-optimizer.d.ts +0 -84
  140. package/dist/core/intelligence/universal-optimizer.js +0 -371
  141. package/dist/core/prd-generator.d.ts +0 -76
  142. package/dist/core/prd-generator.js +0 -173
  143. package/dist/core/prompt-manager.d.ts +0 -110
  144. package/dist/core/prompt-manager.js +0 -274
  145. package/dist/core/prompt-optimizer.d.ts +0 -268
  146. package/dist/core/prompt-optimizer.js +0 -959
  147. package/dist/core/question-engine.d.ts +0 -167
  148. package/dist/core/question-engine.js +0 -356
  149. package/dist/core/session-manager.d.ts +0 -139
  150. package/dist/core/session-manager.js +0 -365
  151. package/dist/core/task-manager.d.ts +0 -211
  152. package/dist/core/task-manager.js +0 -981
  153. package/dist/core/verification-hooks.d.ts +0 -67
  154. package/dist/core/verification-hooks.js +0 -309
  155. package/dist/core/verification-manager.d.ts +0 -107
  156. package/dist/core/verification-manager.js +0 -415
  157. package/dist/index 2.js +0 -13
  158. package/dist/index.d 2.ts +0 -4
  159. package/dist/types/session.d.ts +0 -78
  160. package/dist/types/session.js +0 -8
  161. package/dist/types/verification.d.ts +0 -205
  162. package/dist/types/verification.js +0 -9
@@ -38,25 +38,25 @@ When you run `/clavix:archive`, I:
38
38
 
39
39
  ---
40
40
 
41
- ## How I Archive Projects
41
+ ## How I Archive Projects (v5 Agentic-First)
42
42
 
43
- **I handle all the commands - you just tell me what to do.**
43
+ **I use my native tools directly - no CLI commands involved.**
44
44
 
45
- ### What I Run (You Don't Need To)
45
+ ### What I Do
46
46
 
47
- | What You Want | Command I Execute |
48
- |---------------|-------------------|
49
- | Archive completed project | `clavix archive` |
50
- | Archive specific project | `clavix archive [name]` |
51
- | Archive incomplete work | `clavix archive [name] --force` |
52
- | Delete permanently | `clavix archive [name] --delete` |
53
- | See what's archived | `clavix archive --list` |
54
- | Restore from archive | `clavix archive --restore [name]` |
47
+ | What You Want | How I Do It |
48
+ |---------------|-------------|
49
+ | Archive completed project | Move directory: `.clavix/outputs/<project>` → `.clavix/outputs/archive/<project>` |
50
+ | Archive incomplete work | Same, with your confirmation |
51
+ | Delete permanently | Remove directory: `rm -rf .clavix/outputs/<project>` |
52
+ | See what's archived | List files in `.clavix/outputs/archive/` |
53
+ | Restore from archive | Move back: `.clavix/outputs/archive/<project>` `.clavix/outputs/<project>` |
55
54
 
56
55
  ### Before I Archive
57
56
 
58
57
  I check:
59
58
  - ✓ Projects exist in `.clavix/outputs/`
59
+ - ✓ Task completion status (read tasks.md)
60
60
  - ✓ What you want to do (archive, delete, restore)
61
61
  - ✓ Project name is correct
62
62
 
@@ -69,44 +69,27 @@ I tell you:
69
69
 
70
70
  ### Part B: Understanding Archive Operations
71
71
 
72
- **Archive Modes**:
72
+ **Archive Operations** (I perform these using my native tools):
73
73
 
74
- 1. **Interactive Archive Mode**:
75
- ```bash
76
- clavix archive
77
- ```
78
-
79
- CLI behavior:
80
- - Lists all PRD projects with 100% tasks completed
81
- - Allows user to select which project to archive
82
- - Confirms before archiving
83
- - Moves the project to archive directory
74
+ 1. **Interactive Archive**:
75
+ - I list all PRD projects in `.clavix/outputs/`
76
+ - I check which have 100% tasks completed
77
+ - You select which to archive
78
+ - I move the project to `.clavix/outputs/archive/`
84
79
 
85
80
  2. **Archive Specific Project**:
86
- ```bash
87
- clavix archive [project-name]
88
- ```
89
-
90
- CLI behavior:
91
- - Checks task completion status
92
- - Warns if tasks are incomplete
93
- - Asks for confirmation
94
- - Archives the specific project
81
+ - I check task completion status in `tasks.md`
82
+ - I warn if tasks are incomplete
83
+ - You confirm
84
+ - I move the project directory
95
85
 
96
86
  3. **Force Archive (Incomplete Tasks)**:
97
- ```bash
98
- clavix archive [project-name] --force
99
- ```
100
-
101
87
  Use when:
102
88
  - Project scope changed and some tasks are no longer relevant
103
89
  - User wants to archive work-in-progress
104
90
  - Tasks are incomplete but project is done
105
91
 
106
92
  4. **Delete Project (Permanent Removal)**: **DESTRUCTIVE ACTION**
107
- ```bash
108
- clavix archive [project-name] --delete
109
- ```
110
93
 
111
94
  **WARNING**: This PERMANENTLY deletes the project. Cannot be restored.
112
95
 
@@ -124,24 +107,16 @@ I tell you:
124
107
  ```
125
108
 
126
109
  **Safety confirmation required:**
127
- - Shows project details and task status
128
- - Requires typing project name to confirm
129
- - Warns about permanent deletion
130
- - Lists what will be permanently deleted
110
+ - I show project details and task status
111
+ - I ask you to type project name to confirm
112
+ - I warn about permanent deletion
113
+ - I list what will be permanently deleted
131
114
 
132
115
  5. **List Archived Projects**:
133
- ```bash
134
- clavix archive --list
135
- ```
136
-
137
- Shows all projects currently in archive with their task completion status
116
+ I read the contents of `.clavix/outputs/archive/` and show you all archived projects.
138
117
 
139
118
  6. **Restore from Archive**:
140
- ```bash
141
- clavix archive --restore [project-name]
142
- ```
143
-
144
- Moves a project back from archive to active outputs
119
+ I move a project back: `.clavix/outputs/archive/<project>` → `.clavix/outputs/<project>`
145
120
 
146
121
  ## When to Archive
147
122
 
@@ -180,61 +155,57 @@ Optimized prompts from `/clavix:improve` are stored separately in `.clavix/outpu
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155
 
181
156
  **Prompts are NOT archived with PRD projects.**
182
157
 
183
- **Manage prompts separately (CLI commands):**
184
- ```bash
185
- clavix prompts list # View all prompts
186
- clavix prompts clear # Interactive cleanup
187
- clavix prompts clear --executed # Remove executed only
188
- clavix prompts clear --stale # Remove >30 day old
189
- ```
190
-
191
- **Before archiving, consider cleanup:**
192
- ```bash
193
- clavix prompts clear --executed
194
- ```
158
+ **To manage prompts:**
159
+ - **View all prompts**: List `.clavix/outputs/prompts/*.md` files
160
+ - **View a prompt**: Read `.clavix/outputs/prompts/<id>.md`
161
+ - **Delete executed prompts**: Remove files where frontmatter has `executed: true`
162
+ - **Delete stale prompts**: Remove files older than 30 days (check timestamp in frontmatter)
195
163
 
196
164
  **Prompts lifecycle:**
197
165
  - Independent from PRD lifecycle
198
- - Managed via CLI commands
199
- - Clear manually when project complete
166
+ - Managed by reading/writing files directly
167
+ - Clean up manually when project complete
200
168
 
201
169
  ## Example Workflows
202
170
 
203
171
  ### Workflow 1: Complete Project
204
172
  ```
205
173
  User: "I've finished implementing the user authentication feature"
206
- You: "Great! Let me help you archive it."
174
+ You: "Great! Let me check the task status and help you archive it."
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175
 
208
- Run: clavix archive
176
+ I read: .clavix/outputs/user-authentication-system/tasks.md
177
+ Result: All 15 tasks completed (100%)
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178
 
210
- User selects: user-authentication-system
211
- System shows: All 15 tasks completed (100%)
212
- User confirms: Yes, archive it
179
+ You confirm: Yes, archive it
213
180
 
214
- Result: Project moved to .clavix/outputs/archive/user-authentication-system/
181
+ I execute: mv .clavix/outputs/user-authentication-system .clavix/outputs/archive/
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+
183
+ Result: Project archived to .clavix/outputs/archive/user-authentication-system/
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184
  ```
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185
 
217
186
  ### Workflow 2: Force Archive WIP
218
187
  ```
219
188
  User: "We're pivoting, I want to archive the old API design even though tasks aren't done"
220
- You: "I'll archive it with --force"
189
+ You: "I'll check the status and archive it if you confirm."
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190
 
222
- Run: clavix archive old-api-design --force
191
+ I read: .clavix/outputs/old-api-design/tasks.md
192
+ Result: 8 incomplete tasks
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193
 
224
- System shows: 8 incomplete tasks
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194
  User confirms: Yes, archive anyway
226
195
 
196
+ I execute: mv .clavix/outputs/old-api-design .clavix/outputs/archive/
197
+
227
198
  Result: Project archived despite incomplete tasks
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199
  ```
229
200
 
230
201
  ### Workflow 3: Restore Archived Project
231
202
  ```
232
203
  User: "Actually, we need to revisit that authentication feature"
233
- You: "I'll restore it from the archive"
204
+ You: "I'll restore it from the archive."
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205
 
235
- Run: clavix archive --restore user-authentication-system
206
+ I execute: mv .clavix/outputs/archive/user-authentication-system .clavix/outputs/
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207
 
237
- Result: Project moved back to .clavix/outputs/user-authentication-system/
208
+ Result: Project restored to .clavix/outputs/user-authentication-system/
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209
  ```
239
210
 
240
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  ### Workflow 4: Delete Failed Experiment
@@ -243,26 +214,25 @@ User: "I have a test project 'api-experiment-1' that I don't need anymore"
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214
  You: "Is this something you might reference later, or can it be permanently deleted?"
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215
 
245
216
  User: "It was just a quick test, no value. Delete it."
246
- You: "This will permanently delete the project. I'll run the delete command."
217
+ You: "This will permanently delete the project. Please confirm by typing the project name."
247
218
 
248
- Run: clavix archive api-experiment-1 --delete
249
-
250
- System shows:
219
+ I show:
251
220
  Project: api-experiment-1
252
221
  Tasks: 3/5 completed
253
222
  Files: full-prd.md, quick-prd.md, tasks.md
254
223
 
255
224
  WARNING: This action is PERMANENT and CANNOT be undone.
256
- Type the project name to confirm deletion: _
257
225
 
258
226
  User types: api-experiment-1
259
227
 
260
- Result: Project permanently deleted from .clavix/outputs/api-experiment-1/
228
+ I execute: rm -rf .clavix/outputs/api-experiment-1
229
+
230
+ Result: Project permanently deleted
261
231
  ```
262
232
 
263
233
  ---
264
234
 
265
- ## Agent Transparency (v4.9)
235
+ ## Agent Transparency (v5.0)
266
236
 
267
237
  ### CLI Reference (Commands I Execute)
268
238
  {{INCLUDE:agent-protocols/cli-reference.md}}
@@ -295,37 +265,37 @@ Result: Project permanently deleted from .clavix/outputs/api-experiment-1/
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265
  - Archive keeps your active projects list clean and focused
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266
  - Archived projects maintain all their data (nothing is deleted)
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267
  - Archive is searchable - you can still `grep` or find files in archive/
298
- - Regular archiving improves `/clavix:plan` and `/clavix:implement` performance
299
- - Use `--list` regularly to know what's been archived
268
+ - Regular archiving keeps `.clavix/outputs/` organized
269
+ - Check `.clavix/outputs/archive/` to see what's been archived
300
270
 
301
271
  ## Troubleshooting
302
272
 
303
273
  ### Issue: No projects available to archive
304
274
  **Cause**: No projects in `.clavix/outputs/` OR all already archived
305
275
 
306
- **Agent recovery**:
307
- 1. Check if `.clavix/outputs/` exists: `ls .clavix/outputs/`
276
+ **How I handle it**:
277
+ 1. Read `.clavix/outputs/` directory
308
278
  2. If directory doesn't exist: "No PRD projects found. Create one with `/clavix:prd`"
309
- 3. If empty: Run `clavix archive --list` to show archived projects
279
+ 3. If empty: Check `.clavix/outputs/archive/` for archived projects
310
280
  4. Communicate: "All projects are already archived" or "No projects exist yet"
311
281
 
312
282
  ### Issue: Trying to archive project with incomplete tasks
313
283
  **Cause**: User wants to archive but tasks aren't 100% done
314
284
 
315
- **Agent recovery**:
316
- 1. CLI will warn about incomplete tasks
285
+ **How I handle it**:
286
+ 1. I read tasks.md and count incomplete tasks
317
287
  2. Ask user: "Project has X incomplete tasks. Do you want to:
318
288
  - Complete tasks first with `/clavix:implement`
319
- - Archive anyway with `--force` (tasks remain incomplete but archived)
289
+ - Archive anyway (tasks remain incomplete but archived)
320
290
  - Cancel archival"
321
- 3. If user confirms force: Run `clavix archive [project] --force`
322
- 4. If scope changed: Explain `--force` is appropriate
291
+ 3. If user confirms: I move the directory
292
+ 4. If scope changed: Explain force archive is appropriate
323
293
 
324
294
  ### Issue: Cannot restore archived project (name conflict)
325
295
  **Cause**: Project with same name already exists in active outputs
326
296
 
327
- **Agent recovery**:
328
- 1. CLI will show error: "Project '[name]' already exists in active outputs"
297
+ **How I handle it**:
298
+ 1. I detect the conflict when checking the target directory
329
299
  2. Ask user which option:
330
300
  - Archive the active project first, then restore old one
331
301
  - Keep both (manual rename required)
@@ -335,62 +305,54 @@ Result: Project permanently deleted from .clavix/outputs/api-experiment-1/
335
305
  ### Issue: Unsure whether to delete or archive
336
306
  **Cause**: User wants to clean up but uncertain about permanence
337
307
 
338
- **Agent recovery**:
308
+ **How I handle it**:
339
309
  1. Use decision tree to guide user:
340
- ```
341
- Ask user questions:
342
310
  - "Is this a failed experiment with no learning value?"
343
311
  - "Might you need to reference this code later?"
344
312
  - "Are you unsure if it's valuable?"
345
- ```
346
313
  2. Default recommendation: **ARCHIVE** (safer, reversible)
347
314
  3. Only suggest DELETE for: duplicates, failed experiments, test data with zero value
348
315
  4. Remind: "Archive is free, disk space is cheap, regret is expensive"
349
316
 
350
- ### Issue: CLI command fails or hangs
317
+ ### Issue: File operation fails
351
318
  **Cause**: File system permissions, missing directory, or process error
352
319
 
353
- **Agent recovery**:
354
- 1. Check error output from CLI
320
+ **How I handle it**:
321
+ 1. Check error output
355
322
  2. Common fixes:
356
323
  - Check `.clavix/outputs/` exists and is writable
357
324
  - Verify project name is correct (no typos)
358
325
  - Check if another process is accessing the files
359
- 3. Suggest: Run with full project path or retry
360
- 4. If persistent: Inform user to check file permissions
326
+ 3. Retry the operation or inform user about permissions
361
327
 
362
- ### Issue: Accidentally deleted project (used --delete instead of archive)
363
- **Cause**: User error or misunderstanding of --delete flag
328
+ ### Issue: Accidentally deleted project
329
+ **Cause**: User error
364
330
 
365
- **Agent recovery**:
366
- 1. Acknowledge: "Project was permanently deleted via `--delete` flag"
331
+ **How I handle it**:
332
+ 1. Acknowledge: "Project was permanently deleted"
367
333
  2. Check recovery options:
368
334
  - "If code was committed to git, we can recover from git history"
369
335
  - "Check if you have local backups"
370
336
  - "Check if IDE has local history (VS Code, JetBrains)"
371
337
  3. Prevention: "Going forward, use ARCHIVE by default. Only DELETE when absolutely certain."
372
- 4. No recovery possible from Clavix itself
373
338
 
374
339
  ### Issue: Archive directory getting too large
375
340
  **Cause**: Many archived projects accumulating
376
341
 
377
- **Agent response**:
342
+ **How I handle it**:
378
343
  1. Explain: "Archive is designed to grow - this is normal behavior"
379
- 2. Archived projects don't affect active command performance
380
- 3. If user truly concerned:
381
- - Review archive: `clavix archive --list`
344
+ 2. Archived projects don't affect workflow performance
345
+ 3. If user concerned:
346
+ - List archive contents
382
347
  - Identify ancient/irrelevant projects
383
- - Delete only truly obsolete ones: `clavix archive [old-project] --delete`
348
+ - Delete only truly obsolete ones
384
349
  - Or suggest external backup for very old projects
385
350
 
386
351
  ### Issue: Archived project but forgot what it was about
387
352
  **Cause**: No naming convention or time passed
388
353
 
389
- **Agent recovery**:
390
- 1. Read the PRD to remind user:
391
- ```bash
392
- cat .clavix/outputs/archive/[project-name]/full-prd.md
393
- ```
354
+ **How I handle it**:
355
+ 1. Read the PRD: `.clavix/outputs/archive/[project-name]/full-prd.md`
394
356
  2. Summarize: Problem, Goal, Features from PRD
395
357
  3. Suggest: Better naming conventions going forward
396
358
  - Example: `2024-01-user-auth` (date-feature format)
@@ -71,19 +71,18 @@ Me: [Finds your latest prompt]
71
71
  Me: "Done! Here's what I built..."
72
72
  ```
73
73
 
74
- ### The Detailed Version
74
+ ### The Detailed Version (v5 Agentic-First)
75
75
 
76
76
  **Step 1: I find your prompt**
77
77
 
78
- I automatically run these commands (you don't need to):
79
- - `clavix execute --latest` - Get most recent prompt
80
- - Or `clavix execute --latest --standard` - Get latest standard depth prompt
81
- - Or `clavix execute --latest --comprehensive` - Get latest comprehensive depth prompt
82
- - Or `clavix execute --id <id>` - Get specific prompt
78
+ I read directly from the file system:
79
+ - List `.clavix/outputs/prompts/*.md` to find saved prompts
80
+ - Get the most recent one (by timestamp in filename or frontmatter)
81
+ - Read the prompt file: `.clavix/outputs/prompts/<id>.md`
83
82
 
84
83
  **Step 2: I read and understand**
85
84
 
86
- I'll parse the prompt file, extract:
85
+ I parse the prompt file and extract:
87
86
  - The objective (what to build)
88
87
  - Requirements (specifics to implement)
89
88
  - Technical constraints (how to build it)
@@ -91,7 +90,7 @@ I'll parse the prompt file, extract:
91
90
 
92
91
  **Step 3: I implement everything**
93
92
 
94
- This is where I actually write code:
93
+ This is where I actually write code using my native tools:
95
94
  - Create new files as needed
96
95
  - Modify existing files
97
96
  - Write functions, components, classes
@@ -99,10 +98,10 @@ This is where I actually write code:
99
98
 
100
99
  **Step 4: I verify automatically**
101
100
 
102
- After building, I run verification myself:
103
- - `clavix verify --latest` - Check the implementation
104
- - Run any automated tests
105
- - Build/compile to ensure no errors
101
+ After building, I verify by:
102
+ - Running tests (if test suite exists)
103
+ - Building/compiling to ensure no errors
104
+ - Checking requirements from the checklist
106
105
 
107
106
  **Step 5: I report results**
108
107
 
@@ -176,52 +175,43 @@ I'll explain what's wrong and what you might need to do:
176
175
 
177
176
  ---
178
177
 
179
- ## Prompt Management (Commands I Run)
180
-
181
- These are commands I execute automatically - you don't need to run them.
178
+ ## Prompt Management (v5 Agentic-First)
182
179
 
183
180
  **Where prompts live:**
184
- - All prompts: `.clavix/outputs/prompts/`
185
-
186
- ### Commands I Use (Reference)
187
-
188
- | What I Do | Command I Run |
189
- |-----------|---------------|
190
- | List saved prompts | `clavix prompts list` |
191
- | Get latest prompt | `clavix execute --latest` |
192
- | Get specific prompt | `clavix execute --id <id>` |
193
- | Run verification | `clavix verify --latest` |
194
- | Clean up executed | `clavix prompts clear --executed` |
195
- | Clean up stale (>30d) | `clavix prompts clear --stale` |
181
+ - All prompts: `.clavix/outputs/prompts/*.md`
182
+ - Metadata: In frontmatter of each `.md` file
196
183
 
197
- ### Automatic Cleanup
184
+ ### How I Access Prompts (Native Tools)
198
185
 
199
- After I finish implementing and verification passes:
200
- - I clean up executed prompts automatically
201
- - Old prompts (>30 days) get flagged as stale for removal
202
- - I keep your storage tidy
186
+ | What I Do | How I Do It |
187
+ |-----------|-------------|
188
+ | List saved prompts | List `.clavix/outputs/prompts/*.md` files |
189
+ | Get latest prompt | Find newest file by timestamp in filename |
190
+ | Get specific prompt | Read `.clavix/outputs/prompts/<id>.md` |
191
+ | Mark as executed | Edit frontmatter: `executed: true` |
192
+ | Clean up executed | Delete files where frontmatter has `executed: true` |
203
193
 
204
194
  ### The Prompt Lifecycle
205
195
 
206
196
  ```
207
- 1. YOU CREATE → /clavix:improve
208
- 2. I EXECUTE → /clavix:execute (you are here)
197
+ 1. YOU CREATE → /clavix:improve (saves to .clavix/outputs/prompts/<id>.md)
198
+ 2. I EXECUTE → /clavix:execute (you are here) - I read and implement
209
199
  3. I VERIFY → Automatic verification
210
- 4. I CLEANUPRemove executed prompts
200
+ 4. MARK DONEI update frontmatter with executed: true
211
201
  ```
212
202
 
213
203
  ---
214
204
 
215
205
  ## Finding Your Way Around
216
206
 
217
- Need to see what projects exist or check progress? I use these commands:
207
+ Need to see what projects exist or check progress? I read the file system:
218
208
 
219
- | What I Need | Command I Run |
209
+ | What I Need | How I Find It |
220
210
  |-------------|---------------|
221
- | See all projects | `clavix list` |
222
- | Check a specific project | `clavix show --output <project>` |
223
- | See active sessions | `clavix list --sessions` |
224
- | Find archived work | `clavix list --archived` |
211
+ | See all projects | List directories in `.clavix/outputs/` |
212
+ | Check a specific project | Read `.clavix/outputs/<project>/` files |
213
+ | See saved prompts | List `.clavix/outputs/prompts/*.md` files |
214
+ | Find archived work | List `.clavix/outputs/archive/` |
225
215
 
226
216
  ---
227
217
 
@@ -271,7 +261,7 @@ If I can't get verification to pass after trying:
271
261
 
272
262
  ---
273
263
 
274
- ## Agent Transparency (v4.11)
264
+ ## Agent Transparency (v5.0)
275
265
 
276
266
  ### CLI Reference (Commands I Execute)
277
267
  {{INCLUDE:agent-protocols/cli-reference.md}}
@@ -65,9 +65,9 @@ Me: "All tasks complete! Your project is built."
65
65
 
66
66
  ### The Detailed Version
67
67
 
68
- **First time I run:**
68
+ **First time I run (v5 Agentic-First):**
69
69
 
70
- 1. **I check for your task list** - Load tasks.md from your PRD folder
70
+ 1. **I find your task list** - Read `tasks.md` from your PRD folder (`.clavix/outputs/<project>/tasks.md`)
71
71
  2. **I ask about git commits** (only if you have lots of tasks):
72
72
  > "You've got 12 tasks. Want me to create git commits as I go?
73
73
  >
@@ -78,36 +78,32 @@ Me: "All tasks complete! Your project is built."
78
78
  >
79
79
  > Which do you prefer? (I'll default to 'none' if you don't care)"
80
80
 
81
- 3. **I initialize tracking** - Run `clavix implement` to set up progress tracking
82
- 4. **I start building** - First incomplete task
81
+ 3. **I start building** - First incomplete task
83
82
 
84
83
  **Each task I work on:**
85
84
 
86
85
  1. **Read the task** - Understand what needs to be built
87
86
  2. **Check the PRD** - Make sure I understand the requirements
88
- 3. **Implement it** - Write code, create files, build features
89
- 4. **Mark it complete** - Run `clavix task-complete {task-id}` automatically
90
- 5. **Move to next** - The command shows me what's next
87
+ 3. **Implement it** - Write code, create files, build features using my native tools
88
+ 4. **Mark it complete** - Use Edit tool to change `- [ ]` to `- [x]` in tasks.md
89
+ 5. **Move to next** - Find the next incomplete task
91
90
 
92
91
  **If we get interrupted:**
93
92
 
94
93
  No problem! Just run `/clavix:implement` again and I pick up where we left off.
95
94
  The checkboxes in tasks.md track exactly what's done.
96
95
 
97
- ## ⚠️ Critical Command: task-complete
96
+ ## ⚠️ How I Mark Tasks Complete (v5 Agentic-First)
98
97
 
99
- **After finishing EACH task, I MUST run:**
100
- ```bash
101
- clavix task-complete <task-id>
102
- ```
98
+ **After finishing EACH task, I use my Edit tool to update tasks.md:**
103
99
 
104
- **Why this matters:**
105
- - Updates tasks.md automatically (checkboxes)
106
- - Tracks progress correctly in config
107
- - Triggers git commits (if enabled)
108
- - Shows me the next task
100
+ Change: `- [ ] Task description` → `- [x] Task description`
109
101
 
110
- **NEVER manually edit tasks.md checkboxes** - always use this command.
102
+ **Why this matters:**
103
+ - Updates tasks.md directly (checkboxes)
104
+ - Progress is tracked by counting checkboxes
105
+ - Git commits (if enabled) are created with my Bash tool
106
+ - I read tasks.md to find the next incomplete task
111
107
 
112
108
  ---
113
109
 
@@ -115,27 +111,19 @@ clavix task-complete <task-id>
115
111
 
116
112
  **I handle this automatically - you don't need to do anything.**
117
113
 
118
- ### What Happens Behind the Scenes
119
-
120
- After I finish implementing a task, I run:
121
- ```bash
122
- clavix task-complete {task-id}
123
- ```
124
-
125
- This does several things:
126
- - Updates the checkbox in tasks.md ([ ] → [x])
127
- - Tracks progress in the config file
128
- - Creates a git commit (if you enabled that)
129
- - Shows me the next task
114
+ ### What Happens (v5 Agentic-First)
130
115
 
131
- ### Why I Don't Edit Checkboxes Manually
116
+ After I finish implementing a task:
132
117
 
133
- The command keeps everything in sync. If I edited the file directly, the progress tracking could get confused. Trust the system!
118
+ 1. **I use Edit tool** to change `- [ ]` to `- [x]` in tasks.md
119
+ 2. **I count progress** by reading tasks.md and counting checkboxes
120
+ 3. **I commit** (if you enabled that) using git commands
121
+ 4. **I find next task** by scanning for the next `- [ ]` in tasks.md
134
122
 
135
123
  ### What You'll See
136
124
 
137
125
  ```
138
- ✓ Task complete: "Set up project structure" (phase-1-setup-1)
126
+ ✓ Task complete: "Set up project structure"
139
127
 
140
128
  Progress: 2/8 tasks (25%)
141
129
 
@@ -160,14 +148,14 @@ Starting now...
160
148
 
161
149
  ## Finding Your Way Around
162
150
 
163
- Need to see what projects exist or check progress? I use these commands:
151
+ Need to see what projects exist or check progress? I read the file system:
164
152
 
165
- | What I Need | Command I Run |
153
+ | What I Need | How I Find It |
166
154
  |-------------|---------------|
167
- | See all projects | `clavix list` |
168
- | Check a specific project | `clavix show --output <project>` |
169
- | See active sessions | `clavix list --sessions` |
170
- | Find archived work | `clavix list --archived` |
155
+ | See all projects | List directories in `.clavix/outputs/` |
156
+ | Check a specific project | Read `.clavix/outputs/<project>/` files |
157
+ | See task progress | Read `.clavix/outputs/<project>/tasks.md` |
158
+ | Find archived work | List `.clavix/outputs/archive/` |
171
159
 
172
160
  ## When I Can't Continue (Blocked Tasks)
173
161
 
@@ -314,7 +302,7 @@ You don't need to remember these - I handle all the tracking.
314
302
 
315
303
  ---
316
304
 
317
- ## Agent Transparency (v4.9)
305
+ ## Agent Transparency (v5.0)
318
306
 
319
307
  ### Workflow State Detection
320
308
  {{INCLUDE:agent-protocols/state-awareness.md}}
@@ -348,14 +336,14 @@ You don't need to remember these - I handle all the tracking.
348
336
  > - Did you run `/clavix:plan` first?
349
337
  > - Is there a PRD folder in .clavix/outputs/?"
350
338
 
351
- ### "Task command not working"
339
+ ### "Can't update tasks.md"
352
340
 
353
- **What happened:** The `clavix task-complete` command isn't recognized.
341
+ **What happened:** I couldn't edit the tasks.md file to mark tasks complete.
354
342
 
355
343
  **What I'll do:**
356
- > "Having trouble with the task command. Let me check your Clavix version..."
344
+ > "Having trouble updating tasks.md. Let me check permissions..."
357
345
  >
358
- > If it's outdated, I'll suggest: "Try `npm install -g clavix@latest` to update"
346
+ > Common fixes: Check file permissions, ensure .clavix/outputs/ is writable
359
347
 
360
348
  ### "Can't find that task ID"
361
349