npm - claude-flow - Versions diffs - 3.57.0 → 3.57.2 - Mend

claude-flow 3.57.0 → 3.57.2

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (33) hide show

package/.claude/helpers/intelligence.cjs CHANGED Viewed

@@ -277,11 +277,9 @@ function sessionGet(key) {
 function sessionSet(key, value) {
   try {
-    if (!fs.existsSync(SESSION_DIR)) fs.mkdirSync(SESSION_DIR, { recursive: true });
-    let session = {};
-    if (fs.existsSync(SESSION_FILE)) {
-      session = JSON.parse(fs.readFileSync(SESSION_FILE, 'utf-8'));
-    }
+    // Session creation belongs to session.cjs; recall may run before SessionStart.
+    if (!fs.existsSync(SESSION_FILE)) return;
+    const session = JSON.parse(fs.readFileSync(SESSION_FILE, 'utf-8'));
     if (!session.context) session.context = {};
     session.context[key] = value;
     session.updatedAt = new Date().toISOString();

package/.claude/proven-config.json CHANGED Viewed

@@ -1,5 +1,5 @@
 {
-  "adoptedAt": 1792273903466,
+  "adoptedAt": 1792452783501,
   "championId": "sha256:6141a8ea990c5063b77e090ae8f37f9c539d8aa8f58dcceb30f3a82f97e57319",
   "manifest": {
     "schema": "ruflo.proven-config/v1",

package/README.md CHANGED Viewed

@@ -10,10 +10,11 @@
 [![Star on GitHub](https://img.shields.io/github/stars/ruvnet/claude-flow?style=for-the-badge&logo=github&color=gold)](https://github.com/ruvnet/claude-flow)
 <p align="center">
-<a href="data/npm-downloads.latest.json"><img src="docs/assets/readme/badges/downloads.svg?v=mobile-readable-3" width="300" alt="Ecosystem npm downloads: 12.52M over 12 months through October 4, 2026"></a>
+<a href="docs/harness-origins.md"><img src="https://raw.githubusercontent.com/ruvnet/ruflo/e69e4b95aa08d65ea0f7715489bbf8e62a83a0d2/docs/assets/readme/badges/first-commit.svg" width="300" height="76" alt="Claude Flow lineage: first commit June 2, 2025 by rUv; inspect the evidence"></a>
+<a href="data/npm-downloads.latest.json"><img src="https://raw.githubusercontent.com/ruvnet/ruflo/275aff65a198af758923669acff36f03d1f41623/docs/assets/readme/badges/downloads.svg" width="300" height="76" alt="Illustrative download counter starts at 98,000,000 and adds varied amounts each second in a 30 second loop. Verified dataset: 97,022,120 download events."></a>
 <br>
-<a href="https://github.com/ruvnet/claude-flow"><img src="docs/assets/readme/badges/claude.svg?v=mobile-readable-3" width="300" alt="Claude Code"></a>
-<a href="https://www.npmjs.com/package/@claude-flow/codex"><img src="docs/assets/readme/badges/codex.svg?v=mobile-readable-3" width="300" alt="Codex Plugin"></a>
+<a href="https://github.com/ruvnet/claude-flow"><img src="https://raw.githubusercontent.com/ruvnet/ruflo/d1e80400bdefe01d3b13e70395f88fffab76bb18/docs/assets/readme/badges/claude.svg" width="300" height="76" alt="Claude Code plugin"></a>
+<a href="https://www.npmjs.com/package/@claude-flow/codex"><img src="https://raw.githubusercontent.com/ruvnet/ruflo/d1e80400bdefe01d3b13e70395f88fffab76bb18/docs/assets/readme/badges/codex.svg" width="300" height="76" alt="Codex plugin"></a>
 </p>
 </div>
@@ -109,6 +110,14 @@ User → Ruflo (CLI/MCP) → Router → Swarm → Agents → Memory → LLM prov
 > **New to Ruflo?** You don't need to learn 314 MCP tools or 26 CLI commands. After `init`, just use Claude Code normally — the hooks system automatically routes tasks, learns from successful patterns, and coordinates agents in the background.
+### An origin you can inspect
+[![Claude Flow to Ruflo: founding idea on June 2, 2025, orchestration source on June 10, and the continuing Ruflo lineage.](docs/assets/readme/harness-origins.svg)](docs/harness-origins.md)
+**Built by [Reuven Cohen (rUv)](https://github.com/ruvnet), originally as Claude Flow.** The [first commit, June 2, 2025](https://github.com/ruvnet/ruflo/commit/7c1f9402d70e7af56c01a879073cbac92564dc4e), describes a code orchestration layer for recursive agent cycles: Claude writes, edits, tests and improves. The [June 10 source snapshot](https://github.com/ruvnet/ruflo/tree/dba545f012ea92a2375a26332bbf3797495e93c9) adds orchestration, task scheduling, memory and terminal modules.
+A harness is the workbench around the model: it organizes tasks, carries context between steps and helps check results. **This establishes Ruflo's lineage, not a universal first across every Claude Code tool.** [See the illustrated explainer, exact commits and earlier ecosystem context](docs/harness-origins.md).
 <details>
 <summary><strong>📖 Background — where the name comes from</strong></summary>

package/node_modules/@claude-flow/codex/README.md CHANGED Viewed

@@ -639,19 +639,19 @@ The `@claude-flow/codex` package now includes built-in dual-mode orchestration:
 ```bash
 # List available collaboration templates
-npx claude-flow-codex dual templates
+npx @claude-flow/codex dual templates
 # Run a feature development swarm
-npx claude-flow-codex dual run --template feature --task "Add user authentication"
+npx @claude-flow/codex dual run --template feature --task "Add user authentication"
 # Run a security audit swarm
-npx claude-flow-codex dual run --template security --task "src/auth/"
+npx @claude-flow/codex dual run --template security --task "src/auth/"
 # Run a refactoring swarm
-npx claude-flow-codex dual run --template refactor --task "src/legacy/"
+npx @claude-flow/codex dual run --template refactor --task "src/legacy/"
 # Check collaboration status
-npx claude-flow-codex dual status
+npx @claude-flow/codex dual status
 ```
 ### Codex Loop Runner
@@ -660,15 +660,15 @@ Codex does not expose Claude Code's `ScheduleWakeup`, so `@claude-flow/codex` pr
 ```bash
 # Run Codex repeatedly until it creates .codex/loop/default.complete or reaches 10 iterations
-npx claude-flow-codex loop run "Fix failing tests and create the completion marker when done"
+npx @claude-flow/codex loop run "Fix failing tests and create the completion marker when done"
 # Use command mode for recurring Ruflo workers or custom scripts
-npx claude-flow-codex loop run --name testgaps --interval 270 --max-iterations 0 \
+npx @claude-flow/codex loop run --name testgaps --interval 270 --max-iterations 0 \
   --command "npx claude-flow hooks worker dispatch --trigger testgaps"
 # Inspect or stop a loop from another terminal
-npx claude-flow-codex loop status --name testgaps
-npx claude-flow-codex loop stop --name testgaps
+npx @claude-flow/codex loop status --name testgaps
+npx @claude-flow/codex loop stop --name testgaps
 ```
 Loop state is stored in `.codex/loop/<name>.json`; `loop stop` writes `.codex/loop/<name>.stop`, which the runner observes between iterations.

package/node_modules/@claude-flow/codex/dist/cli.js CHANGED Viewed

File without changes

package/node_modules/@claude-flow/codex/dist/dual-mode/cli.js CHANGED Viewed

@@ -174,17 +174,17 @@ function createTemplateCommand() {
         console.log(chalk.cyan('feature') + ' - Feature Development Swarm');
         console.log('  Pipeline: architect → coder → tester → reviewer');
         console.log('  Platforms: Claude (architect, reviewer) + Codex (coder, tester)');
-        console.log('  Usage: npx claude-flow-codex dual run --template feature --task "Add user auth"');
+        console.log('  Usage: npx @claude-flow/codex dual run --template feature --task "Add user auth"');
         console.log();
         console.log(chalk.cyan('security') + ' - Security Audit Swarm');
         console.log('  Pipeline: scanner → analyzer → fixer');
         console.log('  Platforms: Codex (scanner, fixer) + Claude (analyzer)');
-        console.log('  Usage: npx claude-flow-codex dual run --template security --task "src/auth/"');
+        console.log('  Usage: npx @claude-flow/codex dual run --template security --task "src/auth/"');
         console.log();
         console.log(chalk.cyan('refactor') + ' - Refactoring Swarm');
         console.log('  Pipeline: analyzer → planner → refactorer → validator');
         console.log('  Platforms: Claude (analyzer, planner) + Codex (refactorer, validator)');
-        console.log('  Usage: npx claude-flow-codex dual run --template refactor --task "src/legacy/"');
+        console.log('  Usage: npx @claude-flow/codex dual run --template refactor --task "src/legacy/"');
         console.log();
         console.log(chalk.gray('Custom configurations can be provided via --config <path.json>'));
     });

package/node_modules/@claude-flow/codex/dist/dual-mode/cli.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/node_modules/@claude-flow/plugin-agent-federation/dist/bin.js CHANGED Viewed

File without changes

package/package.json CHANGED Viewed

@@ -1,6 +1,6 @@
 {
   "name": "claude-flow",
-  "version": "3.57.0",
+  "version": "3.57.2",
   "workspaces": [
     "v3/@claude-flow/codex",
     "v3/@claude-flow/mcp",
@@ -68,7 +68,7 @@
     "v3:security": "npm run security:audit && npm run security:test"
   },
   "dependencies": {
-    "@claude-flow/cli-core": "3.7.3",
+    "@claude-flow/cli-core": "3.7.5",
     "@claude-flow/codex": "3.0.5",
     "@claude-flow/mcp": "3.1.1",
     "@claude-flow/neural": "3.0.0",
@@ -113,6 +113,7 @@
     "js-yaml": ">=4.3.0",
     "hono": ">=4.13.2",
     "@ruvector/rvf-wasm": "0.1.5",
+    "@ruvector/rvf": "0.3.4",
     "@hono/node-server": ">=2.1.1",
     "flatted": ">=3.4.0",
     "tar": ">=7.5.11",

package/v3/@claude-flow/cli/README.md CHANGED Viewed

@@ -10,10 +10,11 @@
 [![Star on GitHub](https://img.shields.io/github/stars/ruvnet/claude-flow?style=for-the-badge&logo=github&color=gold)](https://github.com/ruvnet/claude-flow)
 <p align="center">
-<a href="data/npm-downloads.latest.json"><img src="docs/assets/readme/badges/downloads.svg?v=mobile-readable-3" width="300" alt="Ecosystem npm downloads: 12.52M over 12 months through October 4, 2026"></a>
+<a href="docs/harness-origins.md"><img src="https://raw.githubusercontent.com/ruvnet/ruflo/e69e4b95aa08d65ea0f7715489bbf8e62a83a0d2/docs/assets/readme/badges/first-commit.svg" width="300" height="76" alt="Claude Flow lineage: first commit June 2, 2025 by rUv; inspect the evidence"></a>
+<a href="data/npm-downloads.latest.json"><img src="https://raw.githubusercontent.com/ruvnet/ruflo/275aff65a198af758923669acff36f03d1f41623/docs/assets/readme/badges/downloads.svg" width="300" height="76" alt="Illustrative download counter starts at 98,000,000 and adds varied amounts each second in a 30 second loop. Verified dataset: 97,022,120 download events."></a>
 <br>
-<a href="https://github.com/ruvnet/claude-flow"><img src="docs/assets/readme/badges/claude.svg?v=mobile-readable-3" width="300" alt="Claude Code"></a>
-<a href="https://www.npmjs.com/package/@claude-flow/codex"><img src="docs/assets/readme/badges/codex.svg?v=mobile-readable-3" width="300" alt="Codex Plugin"></a>
+<a href="https://github.com/ruvnet/claude-flow"><img src="https://raw.githubusercontent.com/ruvnet/ruflo/d1e80400bdefe01d3b13e70395f88fffab76bb18/docs/assets/readme/badges/claude.svg" width="300" height="76" alt="Claude Code plugin"></a>
+<a href="https://www.npmjs.com/package/@claude-flow/codex"><img src="https://raw.githubusercontent.com/ruvnet/ruflo/d1e80400bdefe01d3b13e70395f88fffab76bb18/docs/assets/readme/badges/codex.svg" width="300" height="76" alt="Codex plugin"></a>
 </p>
 </div>
@@ -109,6 +110,14 @@ User → Ruflo (CLI/MCP) → Router → Swarm → Agents → Memory → LLM prov
 > **New to Ruflo?** You don't need to learn 314 MCP tools or 26 CLI commands. After `init`, just use Claude Code normally — the hooks system automatically routes tasks, learns from successful patterns, and coordinates agents in the background.
+### An origin you can inspect
+[![Claude Flow to Ruflo: founding idea on June 2, 2025, orchestration source on June 10, and the continuing Ruflo lineage.](docs/assets/readme/harness-origins.svg)](docs/harness-origins.md)
+**Built by [Reuven Cohen (rUv)](https://github.com/ruvnet), originally as Claude Flow.** The [first commit, June 2, 2025](https://github.com/ruvnet/ruflo/commit/7c1f9402d70e7af56c01a879073cbac92564dc4e), describes a code orchestration layer for recursive agent cycles: Claude writes, edits, tests and improves. The [June 10 source snapshot](https://github.com/ruvnet/ruflo/tree/dba545f012ea92a2375a26332bbf3797495e93c9) adds orchestration, task scheduling, memory and terminal modules.
+A harness is the workbench around the model: it organizes tasks, carries context between steps and helps check results. **This establishes Ruflo's lineage, not a universal first across every Claude Code tool.** [See the illustrated explainer, exact commits and earlier ecosystem context](docs/harness-origins.md).
 <details>
 <summary><strong>📖 Background — where the name comes from</strong></summary>

package/v3/@claude-flow/cli/catalog-manifest.json CHANGED Viewed

@@ -1,8 +1,8 @@
 {
   "schemaVersion": 1,
   "generation": 7,
-  "generatedAt": "2026-10-17T22:34:44.747Z",
-  "gitSha": "e4fb889e",
+  "generatedAt": "2026-10-19T23:34:04.095Z",
+  "gitSha": "7be330bc",
   "catalog": {
     "agents": 176,
     "tools": 423,

package/v3/@claude-flow/cli/dist/src/commands/hooks.js CHANGED Viewed

@@ -2333,6 +2333,19 @@ const workerListCommand = {
         }
     }
 };
+// Render the status hooks_worker-dispatch actually returned. Only a status that
+// means work finished may read as "completed" (#4196).
+function dispatchStatusLabel(status) {
+    switch (status) {
+        case 'dispatched': return output.highlight('dispatched (background)');
+        case 'queued': return output.highlight('queued (daemon)');
+        case 'no-daemon': return output.warning('no-daemon (not run)');
+        case 'mcp-only': return output.warning('mcp-only (not queued)');
+        case 'synthetic-completed': return output.warning('recorded (no work executed)');
+        case 'completed': return output.success('completed');
+        default: return output.dim(String(status));
+    }
+}
 const workerDispatchCommand = {
     name: 'dispatch',
     description: 'Dispatch a background worker for analysis/optimization',
@@ -2386,9 +2399,15 @@ const workerDispatchCommand = {
                     { field: 'Description', value: result.config.description },
                     { field: 'Est. Duration', value: result.config.estimatedDuration },
                     { field: 'Capabilities', value: result.config.capabilities.join(', ') },
-                    { field: 'Status', value: result.status === 'dispatched' ? output.highlight('dispatched (background)') : output.success('completed') },
+                    { field: 'Status', value: dispatchStatusLabel(result.status) },
                 ],
             });
+            // The tool says why it could not run the worker (e.g. no daemon); show it
+            // rather than letting a recorded-only dispatch read as finished work (#4196).
+            if (result.note) {
+                output.writeln();
+                output.printWarning(result.note);
+            }
             if (background) {
                 output.writeln();
                 output.writeln(output.dim(`Check status: claude-flow hooks worker status --id ${result.workerId}`));

package/v3/@claude-flow/cli/dist/src/commands/memory.js CHANGED Viewed

@@ -659,7 +659,9 @@ const searchCommand = {
                     });
                     return {
                         results: r.results.map(e => ({
-                            id: e.id,
+                            // #2271: searchEntries() ids are truncated to 12 chars and collide
+                            // for entries written within ~2.8h; SmartRetrieval dedupes on id.
+                            id: JSON.stringify([e.namespace, e.key]),
                             key: e.key,
                             content: e.content,
                             score: e.score,
@@ -1592,6 +1594,13 @@ const exportCommand = {
                 namespace: ctx.flags.namespace,
                 includeVectors: ctx.flags.includeVectors ?? true,
             });
+            // memory_export reports failure as { error } rather than throwing; without
+            // this check the command printed "Exported to undefined" and then crashed
+            // reading result.exported.entries (#4204).
+            if (!result || result.error || !result.exported) {
+                output.printError(`Export error: ${result?.error ?? 'memory_export returned no export summary'}`);
+                return { success: false, exitCode: 1 };
+            }
             output.printSuccess(`Exported to ${result.outputPath}`);
             output.printList([
                 `Entries: ${result.exported.entries}`,
@@ -1657,6 +1666,21 @@ const importCommand = {
                 namespace: ctx.flags.namespace,
                 dbPath: resolveDbPath(ctx.flags.path),
             });
+            // memory_import reports a bad file as { error } rather than throwing, and
+            // a partial write as { success: false, error, imported }. Without this the
+            // command printed "Imported from undefined" and crashed on result.imported,
+            // or reported success for an import that dropped entries.
+            const failure = result?.error;
+            if (!result || failure || result.success === false || !result.imported) {
+                output.printError(`Import error: ${failure ?? 'memory_import returned no import summary'}`);
+                if (result?.imported) {
+                    output.printList([
+                        `Entries imported: ${result.imported.entries}`,
+                        `Failed: ${result.failed ?? 'unknown'}`,
+                    ]);
+                }
+                return { success: false, exitCode: 1 };
+            }
             output.printSuccess(`Imported from ${result.inputPath}`);
             output.printList([
                 `Entries: ${result.imported.entries}`,

package/v3/@claude-flow/cli/dist/src/commands/workflow.js CHANGED Viewed

@@ -111,6 +111,12 @@ const runCommand = {
                     dryRun,
                 },
             });
+            const runError = toolError(result);
+            if (runError || !result.metrics) {
+                spinner.fail('Workflow failed');
+                output.printError(`Workflow error: ${runError ?? 'workflow_run returned no workflow summary'}`);
+                return { success: false, exitCode: 1 };
+            }
             if (dryRun) {
                 spinner.succeed('Workflow validated successfully');
             }
@@ -277,6 +283,11 @@ const listCommand = {
                 status: status || 'all',
                 limit,
             });
+            const listError = toolError(result);
+            if (listError || !Array.isArray(result.workflows)) {
+                output.printError(`Failed to list workflows: ${listError ?? 'workflow_list returned no workflows'}`);
+                return { success: false, exitCode: 1 };
+            }
             if (ctx.flags.format === 'json') {
                 output.printJson(result);
                 return { success: true, data: result };
@@ -290,13 +301,19 @@ const listCommand = {
             }
             output.printTable({
                 columns: [
-                    { key: 'id', header: 'ID', width: 15 },
-                    { key: 'template', header: 'Template', width: 15 },
+                    { key: 'id', header: 'ID', width: 30 },
+                    { key: 'name', header: 'Name', width: 24 },
                     { key: 'status', header: 'Status', width: 12, format: formatStageStatus },
-                    { key: 'progress', header: 'Progress', width: 10, align: 'right', format: (v) => `${v}%` },
-                    { key: 'startedAt', header: 'Started', width: 20, format: (v) => new Date(String(v)).toLocaleString() }
+                    { key: 'steps', header: 'Steps', width: 6, align: 'right' },
+                    { key: 'createdAt', header: 'Created', width: 20, format: (v) => new Date(String(v)).toLocaleString() }
                 ],
-                data: result.workflows
+                data: result.workflows.map(w => ({
+                    id: w.workflowId,
+                    name: w.name,
+                    status: w.status,
+                    steps: w.stepCount,
+                    createdAt: w.createdAt,
+                }))
             });
             output.writeln();
             output.printInfo(`Total: ${result.total} workflows`);
@@ -335,30 +352,37 @@ const statusCommand = {
         try {
             const result = await callMCPTool('workflow_status', {
                 workflowId,
+                verbose: true,
             });
+            const statusError = toolError(result);
+            if (statusError) {
+                output.printError(`Failed to get status: ${statusError}`);
+                return { success: false, exitCode: 1 };
+            }
             if (ctx.flags.format === 'json') {
                 output.printJson(result);
                 return { success: true, data: result };
             }
+            const started = result.startedAt ? Date.parse(result.startedAt) : NaN;
+            const ended = result.completedAt ? Date.parse(result.completedAt) : Date.now();
             output.writeln();
             output.printBox([
-                `ID: ${result.id}`,
-                `Template: ${result.template}`,
+                `ID: ${result.workflowId}`,
+                `Name: ${result.name}`,
                 `Status: ${formatStageStatus(result.status)}`,
-                `Progress: ${result.progress}%`,
-                `Duration: ${(result.metrics.duration / 1000).toFixed(1)}s`,
-                `Tokens: ${result.metrics.tokensUsed.toLocaleString()}`,
-                `Agents: ${result.metrics.agentsSpawned}`
+                `Progress: ${Math.round(result.progress)}% (${result.completedSteps}/${result.totalSteps} steps)`,
+                ...(Number.isNaN(started) ? [] : [`Duration: ${((ended - started) / 1000).toFixed(1)}s`]),
+                ...(result.error ? [`Error: ${result.error}`] : []),
             ].join('\n'), 'Workflow Status');
             output.writeln();
-            output.writeln(output.bold('Stage Progress'));
+            output.writeln(output.bold('Step Progress'));
             output.printTable({
                 columns: [
-                    { key: 'name', header: 'Stage', width: 20 },
+                    { key: 'name', header: 'Step', width: 24 },
+                    { key: 'type', header: 'Type', width: 10 },
                     { key: 'status', header: 'Status', width: 12, format: formatStageStatus },
-                    { key: 'agents', header: 'Agents', width: 25, format: (v) => Array.isArray(v) ? v.length.toString() : '0' }
                 ],
-                data: result.stages
+                data: result.steps ?? []
             });
             return { success: true, data: result };
         }
@@ -408,6 +432,11 @@ const stopCommand = {
                 workflowId,
                 graceful: !force,
             });
+            const stopError = toolError(result);
+            if (stopError || result.stopped !== true) {
+                output.printError(`Failed to stop workflow: ${stopError ?? 'the workflow was not stopped'}`);
+                return { success: false, exitCode: 1 };
+            }
             output.printSuccess(`Workflow ${workflowId} stopped`);
             return { success: true, data: result };
         }
@@ -556,6 +585,17 @@ export const workflowCommand = {
     }
 };
 // Helper functions
+/**
+ * The workflow MCP tools report failure as `{ error }` (or `{ success: false, error }`)
+ * instead of throwing, so a command that reads the result without checking it prints
+ * a false success or crashes on a field the error result does not have.
+ */
+function toolError(result) {
+    const r = result;
+    if (!r)
+        return 'the workflow tool returned no result';
+    return typeof r.error === 'string' && r.error.length > 0 ? r.error : undefined;
+}
 function formatStageStatus(status) {
     const statusStr = String(status);
     switch (statusStr) {

package/v3/@claude-flow/cli/dist/src/init/executor.js CHANGED Viewed

@@ -18,7 +18,7 @@ import { generatePreCommitHook, generatePostCommitHook, generateSessionManager,
 import { getInstalledCliVersion, HELPERS_STAMP_FILE } from './helper-refresh.js';
 import { generateClaudeMd } from './claudemd-generator.js';
 import { recordMemoryPackagePath } from './memory-package-resolver.js';
-import { ensureCommonJsCompanions } from './helper-companions.js';
+import { COMMONJS_COMPANION_HELPERS, ensureCommonJsCompanions } from './helper-companions.js';
 import { scanSettingsForRisk, formatRiskFindingsAsWarnings } from './settings-risk-scanner.js';
 import { AUTO_MEMORY_HOOK_TIMEOUT_S, helperHookCommand, helperScopeFor, helperStatusLineCommand, pinToUserHelpers } from './helper-commands.js';
 /**
@@ -548,10 +548,14 @@ export async function executeUpgrade(targetDir, upgradeSettings = false) {
                 catch { }
             }
         }
-        // #3555: the refreshed hook-handler requires the .cjs companions; older
-        // installs only have session.js / memory.js, which can't load in ESM.
-        for (const name of await ensureCommonJsCompanions(path.join(targetDir, '.claude', 'helpers'))) {
-            result.created.push(`.claude/helpers/${name}`);
+        // #4198: refresh existing companions too, so upgraded hook handlers never
+        // keep obsolete session/memory logic. Generate from the CLI trust root.
+        const helpersDir = path.join(targetDir, '.claude', 'helpers');
+        const existingCompanions = new Set(COMMONJS_COMPANION_HELPERS.filter((name) => fs.existsSync(path.join(helpersDir, name))));
+        for (const name of await ensureCommonJsCompanions(helpersDir, true)) {
+            const changes = existingCompanions.has(name)
+                ? result.updated : result.created;
+            changes.push(`.claude/helpers/${name}`);
         }
         // Stamp the installed version so the startup auto-refresh treats these as
         // current (no redundant re-copy on the next command).

package/v3/@claude-flow/cli/dist/src/init/helper-companions.d.ts CHANGED Viewed

@@ -1,3 +1,3 @@
 export declare const COMMONJS_COMPANION_HELPERS: readonly ["session.cjs", "memory.cjs"];
-export declare function ensureCommonJsCompanions(helpersDir: string): Promise<string[]>;
+export declare function ensureCommonJsCompanions(helpersDir: string, force?: boolean): Promise<string[]>;
 //# sourceMappingURL=helper-companions.d.ts.map

package/v3/@claude-flow/cli/dist/src/init/helper-companions.js CHANGED Viewed

@@ -7,13 +7,14 @@
  * `.js` copies, which the refreshed hook-handler no longer requires, so the
  * refresh writes any missing `.cjs` companion from the CLI's own compiled
  * generators (the trust root; no external file to verify). Stale `.js` copies
- * are left in place and ignored. Existing `.cjs` files are never overwritten.
+ * are left in place and ignored. Existing `.cjs` files are preserved during
+ * startup refresh; an explicit init upgrade replaces them from the generators.
  */
 import * as fs from 'fs';
 import * as path from 'path';
 export const COMMONJS_COMPANION_HELPERS = ['session.cjs', 'memory.cjs'];
-export async function ensureCommonJsCompanions(helpersDir) {
-    const missing = COMMONJS_COMPANION_HELPERS.filter((name) => !fs.existsSync(path.join(helpersDir, name)));
+export async function ensureCommonJsCompanions(helpersDir, force = false) {
+    const missing = COMMONJS_COMPANION_HELPERS.filter((name) => force || !fs.existsSync(path.join(helpersDir, name)));
     if (missing.length === 0)
         return [];
     const gen = await import('./helpers-generator.js');

package/v3/@claude-flow/cli/dist/src/mcp-tools/hooks-tools.js CHANGED Viewed

@@ -4175,12 +4175,12 @@ export const hooksIntelligenceLearn = {
 // Intelligence attention hook
 export const hooksIntelligenceAttention = {
     name: 'hooks_intelligence_attention',
-    description: 'Compute attention-weighted similarity using MoE/Flash/Hyperbolic Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
+    description: 'Compute attention-weighted similarity using MoE/Flash. Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
     inputSchema: {
         type: 'object',
         properties: {
             query: { type: 'string', description: 'Query for attention computation' },
-            mode: { type: 'string', description: 'Attention mode (flash, moe, hyperbolic)' },
+            mode: { type: 'string', description: 'Attention mode (flash, moe)' },
             topK: { type: 'number', description: 'Top-k results' },
         },
         required: ['query'],
@@ -4195,6 +4195,12 @@ export const hooksIntelligenceAttention = {
             if (!v.valid)
                 return { success: false, error: v.error };
         }
+        // #3548: only flash and moe have an implementation. Any other mode
+        // (including the previously advertised 'hyperbolic') used to return an
+        // empty stub whose note blamed a missing package; say so instead.
+        if (mode !== 'flash' && mode !== 'moe') {
+            return { success: false, error: `Attention mode "${mode}" is not implemented; supported modes: flash, moe` };
+        }
         let implementation = 'placeholder';
         let embeddingSource = 'none';
         const results = [];
@@ -4370,7 +4376,7 @@ export const hooksIntelligenceAttention = {
                 implementation,
                 _embeddingSource: embeddingSource,
                 _stub: implementation === 'none',
-                _note: implementation === 'none' ? 'No attention backend available. Install @ruvector/attention for real computation.' : undefined,
+                _note: implementation === 'none' ? 'No attention backend available: flash/moe attention from @claude-flow/neural could not be loaded or failed.' : undefined,
                 ...(embeddingSource === 'hash-fallback' && implementation !== 'none'
                     ? { _embeddingNote: 'Query embeddings are hash-based (not semantic). Install @claude-flow/embeddings for real ONNX embeddings.' }
                     : {}),