claude-flow 3.32.8 → 3.32.10

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (455) hide show
  1. package/.claude/.proven-config-version +1 -0
  2. package/.claude/agents/MIGRATION_SUMMARY.md +221 -221
  3. package/.claude/agents/analysis/analyze-code-quality.md +57 -57
  4. package/.claude/agents/analysis/code-analyzer.md +188 -188
  5. package/.claude/agents/analysis/code-review/analyze-code-quality.md +57 -57
  6. package/.claude/agents/architecture/system-design/arch-system-design.md +35 -35
  7. package/.claude/agents/base-template-generator.md +41 -41
  8. package/.claude/agents/consensus/byzantine-coordinator.md +42 -42
  9. package/.claude/agents/consensus/crdt-synchronizer.md +976 -976
  10. package/.claude/agents/consensus/gossip-coordinator.md +42 -42
  11. package/.claude/agents/consensus/performance-benchmarker.md +830 -830
  12. package/.claude/agents/consensus/quorum-manager.md +802 -802
  13. package/.claude/agents/consensus/raft-manager.md +42 -42
  14. package/.claude/agents/consensus/security-manager.md +601 -601
  15. package/.claude/agents/core/coder.md +254 -254
  16. package/.claude/agents/core/planner.md +151 -151
  17. package/.claude/agents/core/researcher.md +173 -173
  18. package/.claude/agents/core/reviewer.md +308 -308
  19. package/.claude/agents/core/tester.md +299 -299
  20. package/.claude/agents/custom/test-long-runner.md +43 -43
  21. package/.claude/agents/data/ml/data-ml-model.md +75 -75
  22. package/.claude/agents/database-specialist.md +9 -9
  23. package/.claude/agents/development/backend/dev-backend-api.md +28 -28
  24. package/.claude/agents/development/dev-backend-api.md +177 -177
  25. package/.claude/agents/devops/ci-cd/ops-cicd-github.md +51 -51
  26. package/.claude/agents/documentation/api-docs/docs-api-openapi.md +62 -62
  27. package/.claude/agents/dual-mode/codex-coordinator.md +206 -206
  28. package/.claude/agents/dual-mode/codex-worker.md +190 -190
  29. package/.claude/agents/dual-mode/dual-orchestrator.md +253 -253
  30. package/.claude/agents/flow-nexus/app-store.md +87 -87
  31. package/.claude/agents/flow-nexus/authentication.md +68 -68
  32. package/.claude/agents/flow-nexus/challenges.md +80 -80
  33. package/.claude/agents/flow-nexus/neural-network.md +87 -87
  34. package/.claude/agents/flow-nexus/payments.md +82 -82
  35. package/.claude/agents/flow-nexus/sandbox.md +75 -75
  36. package/.claude/agents/flow-nexus/swarm.md +75 -75
  37. package/.claude/agents/flow-nexus/user-tools.md +95 -95
  38. package/.claude/agents/flow-nexus/workflow.md +83 -83
  39. package/.claude/agents/github/code-review-swarm.md +520 -520
  40. package/.claude/agents/github/github-modes.md +153 -153
  41. package/.claude/agents/github/issue-tracker.md +298 -298
  42. package/.claude/agents/github/multi-repo-swarm.md +524 -524
  43. package/.claude/agents/github/pr-manager.md +162 -162
  44. package/.claude/agents/github/project-board-sync.md +477 -477
  45. package/.claude/agents/github/release-manager.md +337 -337
  46. package/.claude/agents/github/release-swarm.md +550 -550
  47. package/.claude/agents/github/repo-architect.md +364 -364
  48. package/.claude/agents/github/swarm-issue.md +550 -550
  49. package/.claude/agents/github/swarm-pr.md +401 -401
  50. package/.claude/agents/github/sync-coordinator.md +424 -424
  51. package/.claude/agents/github/workflow-automation.md +604 -604
  52. package/.claude/agents/goal/agent.md +816 -816
  53. package/.claude/agents/goal/code-goal-planner.md +444 -444
  54. package/.claude/agents/goal/goal-planner.md +167 -167
  55. package/.claude/agents/hive-mind/collective-intelligence-coordinator.md +128 -128
  56. package/.claude/agents/hive-mind/queen-coordinator.md +201 -201
  57. package/.claude/agents/hive-mind/scout-explorer.md +240 -240
  58. package/.claude/agents/hive-mind/swarm-memory-manager.md +191 -191
  59. package/.claude/agents/hive-mind/worker-specialist.md +215 -215
  60. package/.claude/agents/neural/safla-neural.md +73 -73
  61. package/.claude/agents/optimization/benchmark-suite.md +662 -662
  62. package/.claude/agents/optimization/load-balancer.md +428 -428
  63. package/.claude/agents/optimization/performance-monitor.md +669 -669
  64. package/.claude/agents/optimization/resource-allocator.md +671 -671
  65. package/.claude/agents/optimization/topology-optimizer.md +805 -805
  66. package/.claude/agents/payments/agentic-payments.md +126 -126
  67. package/.claude/agents/project-coordinator.md +8 -8
  68. package/.claude/agents/python-specialist.md +9 -9
  69. package/.claude/agents/reasoning/agent.md +816 -816
  70. package/.claude/agents/reasoning/goal-planner.md +72 -72
  71. package/.claude/agents/security-auditor.md +9 -9
  72. package/.claude/agents/sona/sona-learning-optimizer.md +65 -65
  73. package/.claude/agents/sparc/architecture.md +452 -452
  74. package/.claude/agents/sparc/pseudocode.md +298 -298
  75. package/.claude/agents/sparc/refinement.md +503 -503
  76. package/.claude/agents/sparc/specification.md +257 -257
  77. package/.claude/agents/specialized/mobile/spec-mobile-react-native.md +87 -87
  78. package/.claude/agents/sublinear/consensus-coordinator.md +337 -337
  79. package/.claude/agents/sublinear/matrix-optimizer.md +184 -184
  80. package/.claude/agents/sublinear/pagerank-analyzer.md +298 -298
  81. package/.claude/agents/sublinear/performance-optimizer.md +367 -367
  82. package/.claude/agents/sublinear/trading-predictor.md +245 -245
  83. package/.claude/agents/swarm/adaptive-coordinator.md +363 -363
  84. package/.claude/agents/swarm/hierarchical-coordinator.md +299 -299
  85. package/.claude/agents/swarm/mesh-coordinator.md +362 -362
  86. package/.claude/agents/templates/automation-smart-agent.md +184 -184
  87. package/.claude/agents/templates/coordinator-swarm-init.md +82 -82
  88. package/.claude/agents/templates/github-pr-manager.md +154 -154
  89. package/.claude/agents/templates/implementer-sparc-coder.md +242 -242
  90. package/.claude/agents/templates/memory-coordinator.md +162 -162
  91. package/.claude/agents/templates/migration-plan.md +723 -723
  92. package/.claude/agents/templates/orchestrator-task.md +119 -119
  93. package/.claude/agents/templates/performance-analyzer.md +178 -178
  94. package/.claude/agents/templates/sparc-coordinator.md +162 -162
  95. package/.claude/agents/testing/production-validator.md +372 -372
  96. package/.claude/agents/testing/tdd-london-swarm.md +221 -221
  97. package/.claude/agents/testing/unit/tdd-london-swarm.md +221 -221
  98. package/.claude/agents/testing/validation/production-validator.md +372 -372
  99. package/.claude/agents/typescript-specialist.md +9 -9
  100. package/.claude/agents/v3/database-specialist.md +9 -9
  101. package/.claude/agents/v3/project-coordinator.md +8 -8
  102. package/.claude/agents/v3/python-specialist.md +9 -9
  103. package/.claude/agents/v3/test-architect.md +9 -9
  104. package/.claude/agents/v3/typescript-specialist.md +9 -9
  105. package/.claude/agents/v3/v3-integration-architect.md +311 -311
  106. package/.claude/agents/v3/v3-memory-specialist.md +280 -280
  107. package/.claude/agents/v3/v3-performance-engineer.md +362 -362
  108. package/.claude/agents/v3/v3-queen-coordinator.md +62 -62
  109. package/.claude/agents/v3/v3-security-architect.md +139 -139
  110. package/.claude/checkpoints/1767754460.json +8 -8
  111. package/.claude/commands/agents/README.md +10 -10
  112. package/.claude/commands/agents/agent-capabilities.md +21 -21
  113. package/.claude/commands/agents/agent-coordination.md +28 -28
  114. package/.claude/commands/agents/agent-spawning.md +28 -28
  115. package/.claude/commands/agents/agent-types.md +26 -26
  116. package/.claude/commands/analysis/COMMAND_COMPLIANCE_REPORT.md +53 -53
  117. package/.claude/commands/analysis/README.md +9 -9
  118. package/.claude/commands/analysis/bottleneck-detect.md +162 -162
  119. package/.claude/commands/analysis/performance-bottlenecks.md +58 -58
  120. package/.claude/commands/analysis/performance-report.md +25 -25
  121. package/.claude/commands/analysis/token-efficiency.md +44 -44
  122. package/.claude/commands/analysis/token-usage.md +25 -25
  123. package/.claude/commands/automation/README.md +9 -9
  124. package/.claude/commands/automation/auto-agent.md +122 -122
  125. package/.claude/commands/automation/self-healing.md +105 -105
  126. package/.claude/commands/automation/session-memory.md +89 -89
  127. package/.claude/commands/automation/smart-agents.md +72 -72
  128. package/.claude/commands/automation/smart-spawn.md +25 -25
  129. package/.claude/commands/automation/workflow-select.md +25 -25
  130. package/.claude/commands/claude-flow-help.md +103 -103
  131. package/.claude/commands/claude-flow-memory.md +107 -107
  132. package/.claude/commands/claude-flow-swarm.md +205 -205
  133. package/.claude/commands/coordination/README.md +9 -9
  134. package/.claude/commands/coordination/agent-spawn.md +25 -25
  135. package/.claude/commands/coordination/init.md +44 -44
  136. package/.claude/commands/coordination/orchestrate.md +43 -43
  137. package/.claude/commands/coordination/spawn.md +45 -45
  138. package/.claude/commands/coordination/swarm-init.md +85 -85
  139. package/.claude/commands/coordination/task-orchestrate.md +25 -25
  140. package/.claude/commands/flow-nexus/app-store.md +123 -123
  141. package/.claude/commands/flow-nexus/challenges.md +119 -119
  142. package/.claude/commands/flow-nexus/login-registration.md +64 -64
  143. package/.claude/commands/flow-nexus/neural-network.md +133 -133
  144. package/.claude/commands/flow-nexus/payments.md +115 -115
  145. package/.claude/commands/flow-nexus/sandbox.md +82 -82
  146. package/.claude/commands/flow-nexus/swarm.md +86 -86
  147. package/.claude/commands/flow-nexus/user-tools.md +151 -151
  148. package/.claude/commands/flow-nexus/workflow.md +114 -114
  149. package/.claude/commands/github/README.md +11 -11
  150. package/.claude/commands/github/code-review-swarm.md +513 -513
  151. package/.claude/commands/github/code-review.md +25 -25
  152. package/.claude/commands/github/github-modes.md +146 -146
  153. package/.claude/commands/github/github-swarm.md +121 -121
  154. package/.claude/commands/github/issue-tracker.md +291 -291
  155. package/.claude/commands/github/issue-triage.md +25 -25
  156. package/.claude/commands/github/multi-repo-swarm.md +518 -518
  157. package/.claude/commands/github/pr-enhance.md +26 -26
  158. package/.claude/commands/github/pr-manager.md +169 -169
  159. package/.claude/commands/github/project-board-sync.md +470 -470
  160. package/.claude/commands/github/release-manager.md +337 -337
  161. package/.claude/commands/github/release-swarm.md +543 -543
  162. package/.claude/commands/github/repo-analyze.md +25 -25
  163. package/.claude/commands/github/repo-architect.md +366 -366
  164. package/.claude/commands/github/swarm-issue.md +481 -481
  165. package/.claude/commands/github/swarm-pr.md +284 -284
  166. package/.claude/commands/github/sync-coordinator.md +300 -300
  167. package/.claude/commands/github/workflow-automation.md +441 -441
  168. package/.claude/commands/hive-mind/README.md +17 -17
  169. package/.claude/commands/hive-mind/hive-mind-consensus.md +8 -8
  170. package/.claude/commands/hive-mind/hive-mind-init.md +18 -18
  171. package/.claude/commands/hive-mind/hive-mind-memory.md +8 -8
  172. package/.claude/commands/hive-mind/hive-mind-metrics.md +8 -8
  173. package/.claude/commands/hive-mind/hive-mind-resume.md +8 -8
  174. package/.claude/commands/hive-mind/hive-mind-sessions.md +8 -8
  175. package/.claude/commands/hive-mind/hive-mind-spawn.md +21 -21
  176. package/.claude/commands/hive-mind/hive-mind-status.md +8 -8
  177. package/.claude/commands/hive-mind/hive-mind-stop.md +8 -8
  178. package/.claude/commands/hive-mind/hive-mind-wizard.md +8 -8
  179. package/.claude/commands/hive-mind/hive-mind.md +27 -27
  180. package/.claude/commands/hooks/README.md +11 -11
  181. package/.claude/commands/hooks/overview.md +57 -57
  182. package/.claude/commands/hooks/post-edit.md +117 -117
  183. package/.claude/commands/hooks/post-task.md +112 -112
  184. package/.claude/commands/hooks/pre-edit.md +113 -113
  185. package/.claude/commands/hooks/pre-task.md +111 -111
  186. package/.claude/commands/hooks/session-end.md +118 -118
  187. package/.claude/commands/hooks/setup.md +102 -102
  188. package/.claude/commands/memory/README.md +9 -9
  189. package/.claude/commands/memory/memory-persist.md +25 -25
  190. package/.claude/commands/memory/memory-search.md +25 -25
  191. package/.claude/commands/memory/memory-usage.md +25 -25
  192. package/.claude/commands/memory/neural.md +47 -47
  193. package/.claude/commands/monitoring/README.md +9 -9
  194. package/.claude/commands/monitoring/agent-metrics.md +25 -25
  195. package/.claude/commands/monitoring/agents.md +44 -44
  196. package/.claude/commands/monitoring/real-time-view.md +25 -25
  197. package/.claude/commands/monitoring/status.md +46 -46
  198. package/.claude/commands/monitoring/swarm-monitor.md +25 -25
  199. package/.claude/commands/optimization/README.md +9 -9
  200. package/.claude/commands/optimization/auto-topology.md +61 -61
  201. package/.claude/commands/optimization/cache-manage.md +25 -25
  202. package/.claude/commands/optimization/parallel-execute.md +25 -25
  203. package/.claude/commands/optimization/parallel-execution.md +49 -49
  204. package/.claude/commands/optimization/topology-optimize.md +25 -25
  205. package/.claude/commands/pair/README.md +260 -260
  206. package/.claude/commands/pair/commands.md +545 -545
  207. package/.claude/commands/pair/config.md +509 -509
  208. package/.claude/commands/pair/examples.md +511 -511
  209. package/.claude/commands/pair/modes.md +347 -347
  210. package/.claude/commands/pair/session.md +406 -406
  211. package/.claude/commands/pair/start.md +208 -208
  212. package/.claude/commands/sparc/analyzer.md +51 -51
  213. package/.claude/commands/sparc/architect.md +53 -53
  214. package/.claude/commands/sparc/ask.md +97 -97
  215. package/.claude/commands/sparc/batch-executor.md +54 -54
  216. package/.claude/commands/sparc/code.md +89 -89
  217. package/.claude/commands/sparc/coder.md +54 -54
  218. package/.claude/commands/sparc/debug.md +83 -83
  219. package/.claude/commands/sparc/debugger.md +54 -54
  220. package/.claude/commands/sparc/designer.md +53 -53
  221. package/.claude/commands/sparc/devops.md +109 -109
  222. package/.claude/commands/sparc/docs-writer.md +80 -80
  223. package/.claude/commands/sparc/documenter.md +54 -54
  224. package/.claude/commands/sparc/innovator.md +54 -54
  225. package/.claude/commands/sparc/integration.md +83 -83
  226. package/.claude/commands/sparc/mcp.md +117 -117
  227. package/.claude/commands/sparc/memory-manager.md +54 -54
  228. package/.claude/commands/sparc/optimizer.md +54 -54
  229. package/.claude/commands/sparc/orchestrator.md +131 -131
  230. package/.claude/commands/sparc/post-deployment-monitoring-mode.md +83 -83
  231. package/.claude/commands/sparc/refinement-optimization-mode.md +83 -83
  232. package/.claude/commands/sparc/researcher.md +54 -54
  233. package/.claude/commands/sparc/reviewer.md +54 -54
  234. package/.claude/commands/sparc/security-review.md +80 -80
  235. package/.claude/commands/sparc/sparc-modes.md +174 -174
  236. package/.claude/commands/sparc/sparc.md +111 -111
  237. package/.claude/commands/sparc/spec-pseudocode.md +80 -80
  238. package/.claude/commands/sparc/supabase-admin.md +348 -348
  239. package/.claude/commands/sparc/swarm-coordinator.md +54 -54
  240. package/.claude/commands/sparc/tdd.md +54 -54
  241. package/.claude/commands/sparc/tester.md +54 -54
  242. package/.claude/commands/sparc/tutorial.md +79 -79
  243. package/.claude/commands/sparc/workflow-manager.md +54 -54
  244. package/.claude/commands/sparc.md +166 -166
  245. package/.claude/commands/stream-chain/pipeline.md +120 -120
  246. package/.claude/commands/stream-chain/run.md +69 -69
  247. package/.claude/commands/swarm/README.md +15 -15
  248. package/.claude/commands/swarm/analysis.md +95 -95
  249. package/.claude/commands/swarm/development.md +96 -96
  250. package/.claude/commands/swarm/examples.md +168 -168
  251. package/.claude/commands/swarm/maintenance.md +102 -102
  252. package/.claude/commands/swarm/optimization.md +117 -117
  253. package/.claude/commands/swarm/research.md +136 -136
  254. package/.claude/commands/swarm/swarm-analysis.md +8 -8
  255. package/.claude/commands/swarm/swarm-background.md +8 -8
  256. package/.claude/commands/swarm/swarm-init.md +19 -19
  257. package/.claude/commands/swarm/swarm-modes.md +8 -8
  258. package/.claude/commands/swarm/swarm-monitor.md +8 -8
  259. package/.claude/commands/swarm/swarm-spawn.md +19 -19
  260. package/.claude/commands/swarm/swarm-status.md +8 -8
  261. package/.claude/commands/swarm/swarm-strategies.md +8 -8
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  273. package/.claude/commands/workflows/README.md +9 -9
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  279. package/.claude/config/v3-dependency-optimization.json +265 -265
  280. package/.claude/config/v3-performance-targets.json +250 -250
  281. package/.claude/helpers/.LOCKED +2 -2
  282. package/.claude/helpers/.helpers-version +1 -0
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  287. package/.claude/helpers/auto-memory-hook.mjs +430 -430
  288. package/.claude/helpers/checkpoint-manager.sh +251 -251
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  290. package/.claude/helpers/daemon-manager.sh +252 -252
  291. package/.claude/helpers/ddd-tracker.sh +144 -144
  292. package/.claude/helpers/github-safe.js +156 -156
  293. package/.claude/helpers/github-setup.sh +45 -45
  294. package/.claude/helpers/guidance-hook.sh +13 -13
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  296. package/.claude/helpers/health-monitor.sh +108 -108
  297. package/.claude/helpers/helpers.manifest.json +13 -0
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  299. package/.claude/helpers/intelligence.cjs +1058 -1058
  300. package/.claude/helpers/learning-hooks.sh +329 -329
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  306. package/.claude/helpers/pattern-consolidator.sh +86 -86
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@@ -1,1058 +1,1058 @@
1
- #!/usr/bin/env node
2
- /**
3
- * Intelligence Layer (ADR-050)
4
- *
5
- * Closes the intelligence loop by wiring PageRank-ranked memory into
6
- * the hook system. Pure CJS — no ESM imports of @claude-flow/memory.
7
- *
8
- * Data files (all under .claude-flow/data/):
9
- * auto-memory-store.json — written by auto-memory-hook.mjs
10
- * graph-state.json — serialized graph (nodes + edges + pageRanks)
11
- * ranked-context.json — pre-computed ranked entries for fast lookup
12
- * pending-insights.jsonl — append-only edit/task log
13
- */
14
-
15
- 'use strict';
16
-
17
- const fs = require('fs');
18
- const path = require('path');
19
-
20
- const DATA_DIR = path.join(process.cwd(), '.claude-flow', 'data');
21
- const STORE_PATH = path.join(DATA_DIR, 'auto-memory-store.json');
22
- const GRAPH_PATH = path.join(DATA_DIR, 'graph-state.json');
23
- const RANKED_PATH = path.join(DATA_DIR, 'ranked-context.json');
24
- const PENDING_PATH = path.join(DATA_DIR, 'pending-insights.jsonl');
25
- const SESSION_DIR = path.join(process.cwd(), '.claude-flow', 'sessions');
26
- const SESSION_FILE = path.join(SESSION_DIR, 'current.json');
27
-
28
- // ── Safety limits (fixes #1530, #1531) ─────────────────────────────────────
29
- const MAX_DATA_FILE_SIZE = 10 * 1024 * 1024; // 10 MB — skip files larger than this
30
- const MAX_GRAPH_NODES = 5000; // skip PageRank if graph exceeds this
31
-
32
- // ── Stop words for trigram matching ──────────────────────────────────────────
33
-
34
- const STOP_WORDS = new Set([
35
- 'the', 'a', 'an', 'is', 'are', 'was', 'were', 'be', 'been', 'being',
36
- 'have', 'has', 'had', 'do', 'does', 'did', 'will', 'would', 'could',
37
- 'should', 'may', 'might', 'shall', 'can', 'to', 'of', 'in', 'for',
38
- 'on', 'with', 'at', 'by', 'from', 'as', 'into', 'through', 'during',
39
- 'before', 'after', 'and', 'but', 'or', 'nor', 'not', 'so', 'yet',
40
- 'both', 'either', 'neither', 'each', 'every', 'all', 'any', 'few',
41
- 'more', 'most', 'other', 'some', 'such', 'no', 'only', 'own', 'same',
42
- 'than', 'too', 'very', 'just', 'because', 'if', 'when', 'which',
43
- 'who', 'whom', 'this', 'that', 'these', 'those', 'it', 'its',
44
- ]);
45
-
46
- // ── Helpers ──────────────────────────────────────────────────────────────────
47
-
48
- function ensureDataDir() {
49
- if (!fs.existsSync(DATA_DIR)) fs.mkdirSync(DATA_DIR, { recursive: true });
50
- }
51
-
52
- function readJSON(filePath) {
53
- // Safety: skip files exceeding MAX_DATA_FILE_SIZE (#1531)
54
- try {
55
- const stat = fs.statSync(filePath);
56
- if (stat.size > MAX_DATA_FILE_SIZE) {
57
- process.stderr.write("[INTELLIGENCE] WARN: Skipping " + path.basename(filePath) + " (" + Math.round(stat.size / 1048576) + "MB exceeds 10MB limit)\n");
58
- return null;
59
- }
60
- } catch { /* file may not exist yet */ }
61
- try {
62
- if (fs.existsSync(filePath)) return JSON.parse(fs.readFileSync(filePath, 'utf-8'));
63
- } catch { /* corrupt file — start fresh */ }
64
- return null;
65
- }
66
-
67
- function writeJSON(filePath, data) {
68
- ensureDataDir();
69
- fs.writeFileSync(filePath, JSON.stringify(data, null, 2), 'utf-8');
70
- }
71
-
72
- function tokenize(text) {
73
- if (!text) return [];
74
- return text.toLowerCase()
75
- .replace(/[^a-z0-9\s-]/g, ' ')
76
- .split(/\s+/)
77
- .filter(w => w.length > 2 && !STOP_WORDS.has(w));
78
- }
79
-
80
- function trigrams(words) {
81
- const t = new Set();
82
- for (const w of words) {
83
- for (let i = 0; i <= w.length - 3; i++) t.add(w.slice(i, i + 3));
84
- }
85
- return t;
86
- }
87
-
88
- function jaccardSimilarity(setA, setB) {
89
- if (setA.size === 0 && setB.size === 0) return 0;
90
- let intersection = 0;
91
- for (const item of setA) { if (setB.has(item)) intersection++; }
92
- return intersection / (setA.size + setB.size - intersection);
93
- }
94
-
95
- // ── Deduplication helper (fixes #1518) ──────────────────────────────────────
96
-
97
- function deduplicateById(entries) {
98
- if (!entries || !Array.isArray(entries)) return entries;
99
- const seen = new Map();
100
- for (const entry of entries) {
101
- const id = entry.id || entry.key;
102
- if (id) {
103
- seen.set(id, entry);
104
- } else {
105
- seen.set(`__no_id_${seen.size}`, entry);
106
- }
107
- }
108
- return Array.from(seen.values());
109
- }
110
-
111
- // ADR-095 G6 — content-hash dedup. The April audit measured 5,706 entries
112
- // in the auto-memory store with only ~20 unique by content; 5,686 dupes
113
- // were the same MEMORY.md sections imported from sibling project dirs
114
- // with different IDs. deduplicateById can't catch these (the IDs really
115
- // are different); we need a content fingerprint.
116
- //
117
- // Fast non-cryptographic fingerprint — collisions on 64-bit FNV-1a are
118
- // vanishingly rare for human prose at the scale of an auto-memory store.
119
- // Whitespace-normalized so trivially-different formatting doesn't bypass dedup.
120
- function fingerprintContent(text) {
121
- if (typeof text !== 'string' || text.length === 0) return '0';
122
- const norm = text.replace(/\s+/g, ' ').trim().toLowerCase();
123
- // FNV-1a 64-bit (split into 32-bit halves to stay within Number safe int)
124
- let h1 = 0x811c9dc5, h2 = 0xcbf29ce4;
125
- for (let i = 0; i < norm.length; i++) {
126
- const c = norm.charCodeAt(i);
127
- h1 ^= c; h1 = Math.imul(h1, 0x01000193) >>> 0;
128
- h2 ^= c; h2 = Math.imul(h2, 0x100000001b3 & 0xffffffff) >>> 0;
129
- }
130
- return `${h1.toString(16)}_${h2.toString(16)}_${norm.length}`;
131
- }
132
-
133
- function deduplicateByContent(entries) {
134
- if (!entries || !Array.isArray(entries)) return entries;
135
- const seen = new Map();
136
- for (const entry of entries) {
137
- const content = entry.content || entry.summary || entry.value || '';
138
- const fp = fingerprintContent(typeof content === 'string' ? content : JSON.stringify(content));
139
- if (!seen.has(fp)) {
140
- seen.set(fp, entry);
141
- } else {
142
- // Keep the entry with the higher accessCount or earlier createdAt
143
- const existing = seen.get(fp);
144
- const existingAccess = existing.accessCount || 0;
145
- const candidateAccess = entry.accessCount || 0;
146
- if (candidateAccess > existingAccess) seen.set(fp, entry);
147
- }
148
- }
149
- return Array.from(seen.values());
150
- }
151
-
152
- // ── Session state helpers ────────────────────────────────────────────────────
153
-
154
- function sessionGet(key) {
155
- try {
156
- if (!fs.existsSync(SESSION_FILE)) return null;
157
- const session = JSON.parse(fs.readFileSync(SESSION_FILE, 'utf-8'));
158
- return key ? (session.context || {})[key] : session.context;
159
- } catch { return null; }
160
- }
161
-
162
- function sessionSet(key, value) {
163
- try {
164
- if (!fs.existsSync(SESSION_DIR)) fs.mkdirSync(SESSION_DIR, { recursive: true });
165
- let session = {};
166
- if (fs.existsSync(SESSION_FILE)) {
167
- session = JSON.parse(fs.readFileSync(SESSION_FILE, 'utf-8'));
168
- }
169
- if (!session.context) session.context = {};
170
- session.context[key] = value;
171
- session.updatedAt = new Date().toISOString();
172
- fs.writeFileSync(SESSION_FILE, JSON.stringify(session, null, 2), 'utf-8');
173
- } catch { /* best effort */ }
174
- }
175
-
176
- // ── PageRank ─────────────────────────────────────────────────────────────────
177
-
178
- function computePageRank(nodes, edges, damping, maxIter) {
179
- damping = damping || 0.85;
180
- maxIter = maxIter || 30;
181
-
182
- const ids = Object.keys(nodes);
183
- const n = ids.length;
184
- if (n === 0) return {};
185
-
186
- // Build adjacency: outgoing edges per node
187
- const outLinks = {};
188
- const inLinks = {};
189
- for (const id of ids) { outLinks[id] = []; inLinks[id] = []; }
190
- for (const edge of edges) {
191
- if (outLinks[edge.sourceId]) outLinks[edge.sourceId].push(edge.targetId);
192
- if (inLinks[edge.targetId]) inLinks[edge.targetId].push(edge.sourceId);
193
- }
194
-
195
- // Initialize ranks
196
- const ranks = {};
197
- for (const id of ids) ranks[id] = 1 / n;
198
-
199
- // Power iteration (with dangling node redistribution)
200
- for (let iter = 0; iter < maxIter; iter++) {
201
- const newRanks = {};
202
- let diff = 0;
203
-
204
- // Collect rank from dangling nodes (no outgoing edges)
205
- let danglingSum = 0;
206
- for (const id of ids) {
207
- if (outLinks[id].length === 0) danglingSum += ranks[id];
208
- }
209
-
210
- for (const id of ids) {
211
- let sum = 0;
212
- for (const src of inLinks[id]) {
213
- const outCount = outLinks[src].length;
214
- if (outCount > 0) sum += ranks[src] / outCount;
215
- }
216
- // Dangling rank distributed evenly + teleport
217
- newRanks[id] = (1 - damping) / n + damping * (sum + danglingSum / n);
218
- diff += Math.abs(newRanks[id] - ranks[id]);
219
- }
220
-
221
- for (const id of ids) ranks[id] = newRanks[id];
222
- if (diff < 1e-6) break; // converged
223
- }
224
-
225
- return ranks;
226
- }
227
-
228
- // ── Edge building ────────────────────────────────────────────────────────────
229
-
230
- function buildEdges(entries) {
231
- const edges = [];
232
- const byCategory = {};
233
-
234
- for (const entry of entries) {
235
- const cat = entry.category || entry.namespace || 'default';
236
- if (!byCategory[cat]) byCategory[cat] = [];
237
- byCategory[cat].push(entry);
238
- }
239
-
240
- // Temporal edges: entries from same sourceFile
241
- const byFile = {};
242
- for (const entry of entries) {
243
- const file = (entry.metadata && entry.metadata.sourceFile) || null;
244
- if (file) {
245
- if (!byFile[file]) byFile[file] = [];
246
- byFile[file].push(entry);
247
- }
248
- }
249
- for (const file of Object.keys(byFile)) {
250
- const group = byFile[file];
251
- for (let i = 0; i < group.length - 1; i++) {
252
- edges.push({
253
- sourceId: group[i].id,
254
- targetId: group[i + 1].id,
255
- type: 'temporal',
256
- weight: 0.5,
257
- });
258
- }
259
- }
260
-
261
- // Similarity edges within categories (Jaccard > 0.3).
262
- // ADR-095 G6 perf: hoist the trigram computation outside the inner
263
- // loop. Previously we re-tokenized + re-trigrammed group[j] for every
264
- // i — O(n²) extra work for nothing. Now compute once per entry.
265
- for (const cat of Object.keys(byCategory)) {
266
- const group = byCategory[cat];
267
- if (group.length < 2) continue;
268
-
269
- // Cache trigram sets for every entry in the group.
270
- const triCache = new Array(group.length);
271
- for (let i = 0; i < group.length; i++) {
272
- triCache[i] = trigrams(tokenize(group[i].content || group[i].summary || ''));
273
- }
274
-
275
- for (let i = 0; i < group.length; i++) {
276
- const triA = triCache[i];
277
- for (let j = i + 1; j < group.length; j++) {
278
- const sim = jaccardSimilarity(triA, triCache[j]);
279
- if (sim > 0.3) {
280
- edges.push({
281
- sourceId: group[i].id,
282
- targetId: group[j].id,
283
- type: 'similar',
284
- weight: sim,
285
- });
286
- }
287
- }
288
- }
289
- }
290
-
291
- return edges;
292
- }
293
-
294
- // ── Bootstrap from MEMORY.md files ───────────────────────────────────────────
295
-
296
- /**
297
- * If auto-memory-store.json is empty, bootstrap by parsing MEMORY.md and
298
- * topic files from the auto-memory directory. This removes the dependency
299
- * on @claude-flow/memory for the initial seed.
300
- */
301
- function bootstrapFromMemoryFiles() {
302
- const entries = [];
303
- const cwd = process.cwd();
304
-
305
- // Search for auto-memory directories
306
- const candidates = [
307
- // Claude Code auto-memory (project-scoped)
308
- path.join(require('os').homedir(), '.claude', 'projects'),
309
- // Local project memory
310
- path.join(cwd, '.claude-flow', 'memory'),
311
- path.join(cwd, '.claude', 'memory'),
312
- ];
313
-
314
- // Find MEMORY.md in project-scoped dirs
315
- for (const base of candidates) {
316
- if (!fs.existsSync(base)) continue;
317
-
318
- // For the projects dir, scope to CURRENT project only (not all 51+ dirs)
319
- if (base.endsWith('projects')) {
320
- try {
321
- // Match Claude Code's project-dir slug: every non-alphanumeric char -> '-'
322
- // (e.g. "G:\\My Drive\\TJ_Vault" -> "G--My-Drive-TJ-Vault"). The old version
323
- // only handled POSIX '/', so on Windows the slug kept ':' and '\\' and never
324
- // matched the real <projects>/<slug>/memory dir — bootstrap found nothing (FIX 5).
325
- const projectSlug = cwd.replace(/[^a-zA-Z0-9]/g, '-');
326
- const memDir = path.join(base, projectSlug, 'memory');
327
- if (fs.existsSync(memDir)) {
328
- parseMemoryDir(memDir, entries);
329
- }
330
- } catch { /* skip */ }
331
- } else if (fs.existsSync(base)) {
332
- parseMemoryDir(base, entries);
333
- }
334
- }
335
-
336
- return entries;
337
- }
338
-
339
- // Truncation transparency (FIX 4): mark the cut with an ellipsis and warn under
340
- // debug, so later reasoning isn't silently built on severed text.
341
- const CLIP_DEBUG = !!(process.env.RUFLO_DEBUG || process.env.DEBUG);
342
- function clip(text, max, label) {
343
- text = text == null ? '' : String(text);
344
- if (text.length <= max) return text;
345
- if (CLIP_DEBUG) process.stderr.write(`[INTELLIGENCE] WARN: truncated ${label || 'value'} from ${text.length} to ${max} chars\n`);
346
- return text.slice(0, max - 1) + '…';
347
- }
348
-
349
- function parseMemoryDir(dir, entries) {
350
- try {
351
- const files = fs.readdirSync(dir).filter(f => f.endsWith('.md'));
352
- for (const file of files) {
353
- const filePath = path.join(dir, file);
354
- const content = fs.readFileSync(filePath, 'utf-8');
355
- if (!content.trim()) continue;
356
-
357
- // Parse markdown sections as separate entries
358
- const sections = content.split(/^##?\s+/m).filter(Boolean);
359
- for (let sIdx = 0; sIdx < sections.length; sIdx++) {
360
- const section = sections[sIdx];
361
- const lines = section.trim().split('\n');
362
- const title = lines[0].trim();
363
- const body = lines.slice(1).join('\n').trim();
364
- if (!body || body.length < 10) continue;
365
-
366
- const id = `mem-${file.replace('.md', '')}-${title.replace(/[^a-z0-9]/gi, '-').toLowerCase().slice(0, 30)}-${sIdx}`;
367
- entries.push({
368
- id,
369
- key: title.toLowerCase().replace(/[^a-z0-9]+/g, '-').slice(0, 50),
370
- content: clip(body, 500, 'memory content'),
371
- summary: title,
372
- namespace: file === 'MEMORY.md' ? 'core' : file.replace('.md', ''),
373
- type: 'semantic',
374
- metadata: { sourceFile: filePath, bootstrapped: true },
375
- createdAt: Date.now(),
376
- });
377
- }
378
- }
379
- } catch { /* skip unreadable dirs */ }
380
- }
381
-
382
- // ── Exported functions ───────────────────────────────────────────────────────
383
-
384
- /**
385
- * init() — Called from session-restore. Budget: <200ms.
386
- * Reads auto-memory-store.json, builds graph, computes PageRank, writes caches.
387
- * If store is empty, bootstraps from MEMORY.md files directly.
388
- */
389
- function init() {
390
- ensureDataDir();
391
-
392
- // Check if graph-state.json is fresh (within 60s of store)
393
- const graphState = readJSON(GRAPH_PATH);
394
- let store = readJSON(STORE_PATH);
395
-
396
- // Bootstrap from MEMORY.md files if store is empty
397
- if (!store || !Array.isArray(store) || store.length === 0) {
398
- const bootstrapped = bootstrapFromMemoryFiles();
399
- if (bootstrapped.length > 0) {
400
- store = bootstrapped;
401
- writeJSON(STORE_PATH, store);
402
- } else {
403
- return { nodes: 0, edges: 0, message: 'No memory entries to index' };
404
- }
405
- }
406
-
407
- // Deduplicate store entries by ID (fixes #1518 — 194MB → ~79KB)
408
- let deduped = deduplicateById(store);
409
- // ADR-095 G6: also dedupe by content fingerprint. The April audit
410
- // measured 5,706 entries with only ~20 unique by content because the
411
- // same MEMORY.md sections get imported from sibling project dirs with
412
- // different IDs. deduplicateById can't catch that; deduplicateByContent
413
- // can. Cuts the graph from O(n²) over near-identical duplicates down
414
- // to O(unique²), which is the difference between a 100MB graph-state
415
- // and a kilobytes-scale one for typical workloads.
416
- const beforeContentDedup = deduped.length;
417
- deduped = deduplicateByContent(deduped);
418
- if (deduped.length < store.length) {
419
- process.stderr.write(
420
- `[INTELLIGENCE] Deduped store: ${store.length} -> ${deduped.length} entries ` +
421
- `(by-id: ${store.length - beforeContentDedup} dropped, by-content: ${beforeContentDedup - deduped.length} dropped)\n`
422
- );
423
- writeJSON(STORE_PATH, deduped);
424
- }
425
-
426
- // Skip rebuild if graph is fresh and store hasn't changed
427
- if (graphState && graphState.nodeCount === deduped.length) {
428
- const age = Date.now() - (graphState.updatedAt || 0);
429
- if (age < 60000) {
430
- return {
431
- nodes: graphState.nodeCount || Object.keys(graphState.nodes || {}).length,
432
- edges: (graphState.edges || []).length,
433
- message: 'Graph cache hit',
434
- };
435
- }
436
- }
437
-
438
- // Build nodes from deduped entries
439
- const nodes = {};
440
- for (const entry of deduped) {
441
- const id = entry.id || entry.key || `entry-${Math.random().toString(36).slice(2, 8)}`;
442
- nodes[id] = {
443
- id,
444
- category: entry.namespace || entry.type || 'default',
445
- confidence: (entry.metadata && entry.metadata.confidence) || 0.5,
446
- accessCount: (entry.metadata && entry.metadata.accessCount) || 0,
447
- createdAt: entry.createdAt || Date.now(),
448
- };
449
- // Ensure entry has id for edge building
450
- entry.id = id;
451
- }
452
-
453
- // Build edges
454
- const edges = buildEdges(deduped);
455
-
456
- // Compute PageRank (skip if graph too large — #1531)
457
- const nodeCount = Object.keys(nodes).length;
458
- let pageRanks = {};
459
- if (nodeCount > MAX_GRAPH_NODES) {
460
- process.stderr.write("[INTELLIGENCE] WARN: Graph has " + nodeCount + " nodes (>" + MAX_GRAPH_NODES + "), skipping PageRank\n");
461
- for (const id of Object.keys(nodes)) pageRanks[id] = 1 / nodeCount;
462
- } else {
463
- pageRanks = computePageRank(nodes, edges, 0.85, 30);
464
- }
465
-
466
- // Write graph state
467
- const graph = {
468
- version: 1,
469
- updatedAt: Date.now(),
470
- nodeCount: Object.keys(nodes).length,
471
- nodes,
472
- edges,
473
- pageRanks,
474
- };
475
- writeJSON(GRAPH_PATH, graph);
476
-
477
- // Build ranked context for fast lookup
478
- const rankedEntries = deduped.map(entry => {
479
- const id = entry.id;
480
- const content = entry.content || entry.value || '';
481
- const summary = entry.summary || entry.key || '';
482
- const words = tokenize(content + ' ' + summary);
483
- return {
484
- id,
485
- content,
486
- summary,
487
- category: entry.namespace || entry.type || 'default',
488
- confidence: nodes[id] ? nodes[id].confidence : 0.5,
489
- pageRank: pageRanks[id] || 0,
490
- accessCount: nodes[id] ? nodes[id].accessCount : 0,
491
- words,
492
- };
493
- }).sort((a, b) => {
494
- const scoreA = 0.6 * a.pageRank + 0.4 * a.confidence;
495
- const scoreB = 0.6 * b.pageRank + 0.4 * b.confidence;
496
- return scoreB - scoreA;
497
- });
498
-
499
- const ranked = {
500
- version: 1,
501
- computedAt: Date.now(),
502
- entries: rankedEntries,
503
- };
504
- writeJSON(RANKED_PATH, ranked);
505
-
506
- return {
507
- nodes: Object.keys(nodes).length,
508
- edges: edges.length,
509
- message: 'Graph built and ranked',
510
- };
511
- }
512
-
513
- /**
514
- * getContext(prompt) — Called from route. Budget: <15ms.
515
- * Matches prompt to ranked entries, returns top-5 formatted context.
516
- */
517
- function getContext(prompt) {
518
- if (!prompt) return null;
519
-
520
- const ranked = readJSON(RANKED_PATH);
521
- if (!ranked || !ranked.entries || ranked.entries.length === 0) return null;
522
-
523
- const promptWords = tokenize(prompt);
524
- if (promptWords.length === 0) return null;
525
- const promptTrigrams = trigrams(promptWords);
526
-
527
- const ALPHA = 0.6; // content match weight
528
- const MIN_THRESHOLD = 0.05;
529
- const TOP_K = 5;
530
-
531
- // Score each entry
532
- const scored = [];
533
- for (const entry of ranked.entries) {
534
- const entryTrigrams = trigrams(entry.words || []);
535
- const contentMatch = jaccardSimilarity(promptTrigrams, entryTrigrams);
536
- const score = ALPHA * contentMatch + (1 - ALPHA) * (entry.pageRank || 0);
537
- if (score >= MIN_THRESHOLD) {
538
- scored.push({ ...entry, score });
539
- }
540
- }
541
-
542
- if (scored.length === 0) return null;
543
-
544
- // Sort by score descending, take top-K
545
- scored.sort((a, b) => b.score - a.score);
546
- const topEntries = scored.slice(0, TOP_K);
547
-
548
- // Boost previously matched patterns (implicit success: user continued working)
549
- const prevMatched = sessionGet('lastMatchedPatterns');
550
-
551
- // Store NEW matched IDs in session state for feedback
552
- const matchedIds = topEntries.map(e => e.id);
553
- sessionSet('lastMatchedPatterns', matchedIds);
554
-
555
- // Only boost previous if they differ from current (avoid double-boosting)
556
- if (prevMatched && Array.isArray(prevMatched)) {
557
- const newSet = new Set(matchedIds);
558
- const toBoost = prevMatched.filter(id => !newSet.has(id));
559
- if (toBoost.length > 0) boostConfidence(toBoost, 0.03);
560
- }
561
-
562
- // Format output
563
- const lines = ['[INTELLIGENCE] Relevant patterns for this task:'];
564
- for (let i = 0; i < topEntries.length; i++) {
565
- const e = topEntries[i];
566
- const display = (e.summary || e.content || '').slice(0, 80);
567
- const accessed = e.accessCount || 0;
568
- lines.push(` * (${e.score.toFixed(2)}) ${display} [rank #${i + 1}, ${accessed}x accessed]`);
569
- }
570
-
571
- return lines.join('\n');
572
- }
573
-
574
- /**
575
- * recordEdit(file) — Called from post-edit. Budget: <2ms.
576
- * Appends to pending-insights.jsonl.
577
- */
578
- function recordEdit(file, success) {
579
- ensureDataDir();
580
- const entry = JSON.stringify({
581
- type: 'edit',
582
- file: file || 'unknown',
583
- // ADR-174: record failures too, not just successes — the learning substrate
584
- // needs negative examples. Defaults true; an explicit false is a failed edit.
585
- success: success !== false,
586
- timestamp: Date.now(),
587
- sessionId: sessionGet('sessionId') || null,
588
- });
589
- fs.appendFileSync(PENDING_PATH, entry + '\n', 'utf-8');
590
- // Runaway-storage guard: pending-insights is append-only and only drained by
591
- // consolidation. If it grows past ~512KB (thousands of un-consolidated edits
592
- // — e.g. the daemon never ran), keep only the most recent 2000 lines so it
593
- // can never grow unbounded. Cheap (a statSync per edit; rewrite only when over).
594
- try {
595
- if (fs.statSync(PENDING_PATH).size > 512 * 1024) {
596
- const lines = fs.readFileSync(PENDING_PATH, 'utf-8').split('\n').filter(Boolean);
597
- if (lines.length > 2000) fs.writeFileSync(PENDING_PATH, lines.slice(-2000).join('\n') + '\n', 'utf-8');
598
- }
599
- } catch (e) { /* non-fatal */ }
600
- }
601
-
602
- /**
603
- * feedback(success) — Called from post-task. Budget: <10ms.
604
- * Boosts or decays confidence for last-matched patterns.
605
- */
606
- function feedback(success) {
607
- const matchedIds = sessionGet('lastMatchedPatterns');
608
- if (!matchedIds || !Array.isArray(matchedIds)) return;
609
-
610
- const amount = success ? 0.05 : -0.02;
611
- boostConfidence(matchedIds, amount);
612
- }
613
-
614
- function boostConfidence(ids, amount) {
615
- const ranked = readJSON(RANKED_PATH);
616
- if (!ranked || !ranked.entries) return;
617
-
618
- let changed = false;
619
- for (const entry of ranked.entries) {
620
- if (ids.includes(entry.id)) {
621
- entry.confidence = Math.max(0, Math.min(1, (entry.confidence || 0.5) + amount));
622
- entry.accessCount = (entry.accessCount || 0) + 1;
623
- changed = true;
624
- }
625
- }
626
-
627
- if (changed) writeJSON(RANKED_PATH, ranked);
628
-
629
- // Also update graph-state confidence
630
- const graph = readJSON(GRAPH_PATH);
631
- if (graph && graph.nodes) {
632
- for (const id of ids) {
633
- if (graph.nodes[id]) {
634
- graph.nodes[id].confidence = Math.max(0, Math.min(1, (graph.nodes[id].confidence || 0.5) + amount));
635
- graph.nodes[id].accessCount = (graph.nodes[id].accessCount || 0) + 1;
636
- }
637
- }
638
- writeJSON(GRAPH_PATH, graph);
639
- }
640
- }
641
-
642
- /**
643
- * consolidate() — Called from session-end. Budget: <500ms.
644
- * Processes pending insights, rebuilds edges, recomputes PageRank.
645
- */
646
- function consolidate() {
647
- ensureDataDir();
648
-
649
- let store = readJSON(STORE_PATH);
650
- if (!store || !Array.isArray(store)) {
651
- return { entries: 0, edges: 0, newEntries: 0, message: 'No store to consolidate' };
652
- }
653
-
654
- // Deduplicate store entries by ID before processing (fixes #1518)
655
- const preDedupCount = store.length;
656
- store = deduplicateById(store);
657
-
658
- // 1. Process pending insights
659
- let newEntries = 0;
660
- if (fs.existsSync(PENDING_PATH)) {
661
- const lines = fs.readFileSync(PENDING_PATH, 'utf-8').trim().split('\n').filter(Boolean);
662
- const editCounts = {};
663
- for (const line of lines) {
664
- try {
665
- const insight = JSON.parse(line);
666
- if (insight.file) {
667
- editCounts[insight.file] = (editCounts[insight.file] || 0) + 1;
668
- }
669
- } catch { /* skip malformed */ }
670
- }
671
-
672
- // Create entries for frequently-edited files (3+ edits)
673
- for (const [file, count] of Object.entries(editCounts)) {
674
- if (count >= 3) {
675
- const exists = store.some(e =>
676
- (e.metadata && e.metadata.sourceFile === file && e.metadata.autoGenerated)
677
- );
678
- if (!exists) {
679
- store.push({
680
- id: `insight-${Date.now()}-${Math.random().toString(36).slice(2, 6)}`,
681
- key: `frequent-edit-${path.basename(file)}`,
682
- content: `File ${file} was edited ${count} times this session — likely a hot path worth monitoring.`,
683
- summary: `Frequently edited: ${path.basename(file)} (${count}x)`,
684
- namespace: 'insights',
685
- type: 'procedural',
686
- metadata: { sourceFile: file, editCount: count, autoGenerated: true },
687
- createdAt: Date.now(),
688
- });
689
- newEntries++;
690
- }
691
- }
692
- }
693
-
694
- // Clear pending
695
- fs.writeFileSync(PENDING_PATH, '', 'utf-8');
696
- }
697
-
698
- // 2. Confidence decay for unaccessed entries
699
- const graph = readJSON(GRAPH_PATH);
700
- if (graph && graph.nodes) {
701
- const now = Date.now();
702
- for (const id of Object.keys(graph.nodes)) {
703
- const node = graph.nodes[id];
704
- const hoursSinceCreation = (now - (node.createdAt || now)) / (1000 * 60 * 60);
705
- if (node.accessCount === 0 && hoursSinceCreation > 24) {
706
- node.confidence = Math.max(0.05, (node.confidence || 0.5) - 0.005 * Math.floor(hoursSinceCreation / 24));
707
- }
708
- }
709
- }
710
-
711
- // 3. Rebuild edges with updated store
712
- for (const entry of store) {
713
- if (!entry.id) entry.id = `entry-${Math.random().toString(36).slice(2, 8)}`;
714
- }
715
- const edges = buildEdges(store);
716
-
717
- // 4. Build updated nodes
718
- const nodes = {};
719
- for (const entry of store) {
720
- nodes[entry.id] = {
721
- id: entry.id,
722
- category: entry.namespace || entry.type || 'default',
723
- confidence: (graph && graph.nodes && graph.nodes[entry.id])
724
- ? graph.nodes[entry.id].confidence
725
- : (entry.metadata && entry.metadata.confidence) || 0.5,
726
- accessCount: (graph && graph.nodes && graph.nodes[entry.id])
727
- ? graph.nodes[entry.id].accessCount
728
- : (entry.metadata && entry.metadata.accessCount) || 0,
729
- createdAt: entry.createdAt || Date.now(),
730
- };
731
- }
732
-
733
- // 5. Recompute PageRank (skip if graph too large — #1531)
734
- const nodeCount = Object.keys(nodes).length;
735
- let pageRanks = {};
736
- if (nodeCount > MAX_GRAPH_NODES) {
737
- process.stderr.write("[INTELLIGENCE] WARN: Graph has " + nodeCount + " nodes (>" + MAX_GRAPH_NODES + "), skipping PageRank in consolidate\n");
738
- for (const id of Object.keys(nodes)) pageRanks[id] = 1 / nodeCount;
739
- } else {
740
- pageRanks = computePageRank(nodes, edges, 0.85, 30);
741
- }
742
-
743
- // 6. Write updated graph
744
- writeJSON(GRAPH_PATH, {
745
- version: 1,
746
- updatedAt: Date.now(),
747
- nodeCount: Object.keys(nodes).length,
748
- nodes,
749
- edges,
750
- pageRanks,
751
- });
752
-
753
- // 7. Write updated ranked context
754
- const rankedEntries = store.map(entry => {
755
- const id = entry.id;
756
- const content = entry.content || entry.value || '';
757
- const summary = entry.summary || entry.key || '';
758
- const words = tokenize(content + ' ' + summary);
759
- return {
760
- id,
761
- content,
762
- summary,
763
- category: entry.namespace || entry.type || 'default',
764
- confidence: nodes[id] ? nodes[id].confidence : 0.5,
765
- pageRank: pageRanks[id] || 0,
766
- accessCount: nodes[id] ? nodes[id].accessCount : 0,
767
- words,
768
- };
769
- }).sort((a, b) => {
770
- const scoreA = 0.6 * a.pageRank + 0.4 * a.confidence;
771
- const scoreB = 0.6 * b.pageRank + 0.4 * b.confidence;
772
- return scoreB - scoreA;
773
- });
774
-
775
- writeJSON(RANKED_PATH, {
776
- version: 1,
777
- computedAt: Date.now(),
778
- entries: rankedEntries,
779
- });
780
-
781
- // 8. Persist updated store (deduped or with new insight entries)
782
- if (newEntries > 0 || store.length < preDedupCount) writeJSON(STORE_PATH, store);
783
-
784
- // 9. Save snapshot for delta tracking
785
- const updatedGraph = readJSON(GRAPH_PATH);
786
- const updatedRanked = readJSON(RANKED_PATH);
787
- saveSnapshot(updatedGraph, updatedRanked);
788
-
789
- return {
790
- entries: store.length,
791
- edges: edges.length,
792
- newEntries,
793
- message: 'Consolidated',
794
- };
795
- }
796
-
797
- // ── Snapshot for delta tracking ─────────────────────────────────────────────
798
-
799
- const SNAPSHOT_PATH = path.join(DATA_DIR, 'intelligence-snapshot.json');
800
-
801
- function saveSnapshot(graph, ranked) {
802
- const snap = {
803
- timestamp: Date.now(),
804
- nodes: graph ? Object.keys(graph.nodes || {}).length : 0,
805
- edges: graph ? (graph.edges || []).length : 0,
806
- pageRankSum: 0,
807
- confidences: [],
808
- accessCounts: [],
809
- topPatterns: [],
810
- };
811
-
812
- if (graph && graph.pageRanks) {
813
- for (const v of Object.values(graph.pageRanks)) snap.pageRankSum += v;
814
- }
815
- if (graph && graph.nodes) {
816
- for (const n of Object.values(graph.nodes)) {
817
- snap.confidences.push(n.confidence || 0.5);
818
- snap.accessCounts.push(n.accessCount || 0);
819
- }
820
- }
821
- if (ranked && ranked.entries) {
822
- snap.topPatterns = ranked.entries.slice(0, 10).map(e => ({
823
- id: e.id,
824
- summary: (e.summary || '').slice(0, 60),
825
- confidence: e.confidence || 0.5,
826
- pageRank: e.pageRank || 0,
827
- accessCount: e.accessCount || 0,
828
- }));
829
- }
830
-
831
- // Keep history: append to array, cap at 50
832
- let history = readJSON(SNAPSHOT_PATH);
833
- if (!Array.isArray(history)) history = [];
834
- history.push(snap);
835
- if (history.length > 50) history = history.slice(-50);
836
- writeJSON(SNAPSHOT_PATH, history);
837
- }
838
-
839
- /**
840
- * stats() — Diagnostic report showing intelligence health and improvement.
841
- * Can be called as: node intelligence.cjs stats [--json]
842
- */
843
- function stats(outputJson) {
844
- const graph = readJSON(GRAPH_PATH);
845
- const ranked = readJSON(RANKED_PATH);
846
- const history = readJSON(SNAPSHOT_PATH) || [];
847
- const pending = fs.existsSync(PENDING_PATH)
848
- ? fs.readFileSync(PENDING_PATH, 'utf-8').trim().split('\n').filter(Boolean).length
849
- : 0;
850
-
851
- // Current state
852
- const nodes = graph ? Object.keys(graph.nodes || {}).length : 0;
853
- const edges = graph ? (graph.edges || []).length : 0;
854
- const density = nodes > 1 ? (2 * edges) / (nodes * (nodes - 1)) : 0;
855
-
856
- // Confidence distribution
857
- const confidences = [];
858
- const accessCounts = [];
859
- if (graph && graph.nodes) {
860
- for (const n of Object.values(graph.nodes)) {
861
- confidences.push(n.confidence || 0.5);
862
- accessCounts.push(n.accessCount || 0);
863
- }
864
- }
865
- confidences.sort((a, b) => a - b);
866
- const confMin = confidences.length ? confidences[0] : 0;
867
- const confMax = confidences.length ? confidences[confidences.length - 1] : 0;
868
- const confMean = confidences.length ? confidences.reduce((s, c) => s + c, 0) / confidences.length : 0;
869
- const confMedian = confidences.length ? confidences[Math.floor(confidences.length / 2)] : 0;
870
-
871
- // Access stats
872
- const totalAccess = accessCounts.reduce((s, c) => s + c, 0);
873
- const accessedCount = accessCounts.filter(c => c > 0).length;
874
-
875
- // PageRank stats
876
- let prSum = 0, prMax = 0, prMaxId = '';
877
- if (graph && graph.pageRanks) {
878
- for (const [id, pr] of Object.entries(graph.pageRanks)) {
879
- prSum += pr;
880
- if (pr > prMax) { prMax = pr; prMaxId = id; }
881
- }
882
- }
883
-
884
- // Top patterns by composite score
885
- const topPatterns = (ranked && ranked.entries || []).slice(0, 10).map((e, i) => ({
886
- rank: i + 1,
887
- summary: (e.summary || '').slice(0, 60),
888
- confidence: (e.confidence || 0.5).toFixed(3),
889
- pageRank: (e.pageRank || 0).toFixed(4),
890
- accessed: e.accessCount || 0,
891
- score: (0.6 * (e.pageRank || 0) + 0.4 * (e.confidence || 0.5)).toFixed(4),
892
- }));
893
-
894
- // Edge type breakdown
895
- const edgeTypes = {};
896
- if (graph && graph.edges) {
897
- for (const e of graph.edges) {
898
- edgeTypes[e.type || 'unknown'] = (edgeTypes[e.type || 'unknown'] || 0) + 1;
899
- }
900
- }
901
-
902
- // Delta from previous snapshot
903
- let delta = null;
904
- if (history.length >= 2) {
905
- const prev = history[history.length - 2];
906
- const curr = history[history.length - 1];
907
- const elapsed = (curr.timestamp - prev.timestamp) / 1000;
908
- const prevConfMean = prev.confidences.length
909
- ? prev.confidences.reduce((s, c) => s + c, 0) / prev.confidences.length : 0;
910
- const currConfMean = curr.confidences.length
911
- ? curr.confidences.reduce((s, c) => s + c, 0) / curr.confidences.length : 0;
912
- const prevAccess = prev.accessCounts.reduce((s, c) => s + c, 0);
913
- const currAccess = curr.accessCounts.reduce((s, c) => s + c, 0);
914
-
915
- delta = {
916
- elapsed: elapsed < 3600 ? `${Math.round(elapsed / 60)}m` : `${(elapsed / 3600).toFixed(1)}h`,
917
- nodes: curr.nodes - prev.nodes,
918
- edges: curr.edges - prev.edges,
919
- confidenceMean: currConfMean - prevConfMean,
920
- totalAccess: currAccess - prevAccess,
921
- };
922
- }
923
-
924
- // Trend over all history
925
- let trend = null;
926
- if (history.length >= 3) {
927
- const first = history[0];
928
- const last = history[history.length - 1];
929
- const sessions = history.length;
930
- const firstConfMean = first.confidences.length
931
- ? first.confidences.reduce((s, c) => s + c, 0) / first.confidences.length : 0;
932
- const lastConfMean = last.confidences.length
933
- ? last.confidences.reduce((s, c) => s + c, 0) / last.confidences.length : 0;
934
- trend = {
935
- sessions,
936
- nodeGrowth: last.nodes - first.nodes,
937
- edgeGrowth: last.edges - first.edges,
938
- confidenceDrift: lastConfMean - firstConfMean,
939
- direction: lastConfMean > firstConfMean ? 'improving' :
940
- lastConfMean < firstConfMean ? 'declining' : 'stable',
941
- };
942
- }
943
-
944
- const report = {
945
- graph: { nodes, edges, density: +density.toFixed(4) },
946
- confidence: {
947
- min: +confMin.toFixed(3), max: +confMax.toFixed(3),
948
- mean: +confMean.toFixed(3), median: +confMedian.toFixed(3),
949
- },
950
- access: { total: totalAccess, patternsAccessed: accessedCount, patternsNeverAccessed: nodes - accessedCount },
951
- pageRank: { sum: +prSum.toFixed(4), topNode: prMaxId, topNodeRank: +prMax.toFixed(4) },
952
- edgeTypes,
953
- pendingInsights: pending,
954
- snapshots: history.length,
955
- topPatterns,
956
- delta,
957
- trend,
958
- };
959
-
960
- if (outputJson) {
961
- console.log(JSON.stringify(report, null, 2));
962
- return report;
963
- }
964
-
965
- // Human-readable output
966
- const bar = '+' + '-'.repeat(62) + '+';
967
- console.log(bar);
968
- console.log('|' + ' Intelligence Diagnostics (ADR-050)'.padEnd(62) + '|');
969
- console.log(bar);
970
- console.log('');
971
-
972
- console.log(' Graph');
973
- console.log(` Nodes: ${nodes}`);
974
- console.log(` Edges: ${edges} (${Object.entries(edgeTypes).map(([t,c]) => `${c} ${t}`).join(', ') || 'none'})`);
975
- console.log(` Density: ${(density * 100).toFixed(1)}%`);
976
- console.log('');
977
-
978
- console.log(' Confidence');
979
- console.log(` Min: ${confMin.toFixed(3)}`);
980
- console.log(` Max: ${confMax.toFixed(3)}`);
981
- console.log(` Mean: ${confMean.toFixed(3)}`);
982
- console.log(` Median: ${confMedian.toFixed(3)}`);
983
- console.log('');
984
-
985
- console.log(' Access');
986
- console.log(` Total accesses: ${totalAccess}`);
987
- console.log(` Patterns used: ${accessedCount}/${nodes}`);
988
- console.log(` Never accessed: ${nodes - accessedCount}`);
989
- console.log(` Pending insights: ${pending}`);
990
- console.log('');
991
-
992
- console.log(' PageRank');
993
- console.log(` Sum: ${prSum.toFixed(4)} (should be ~1.0)`);
994
- console.log(` Top node: ${prMaxId || '(none)'} (${prMax.toFixed(4)})`);
995
- console.log('');
996
-
997
- if (topPatterns.length > 0) {
998
- console.log(' Top Patterns (by composite score)');
999
- console.log(' ' + '-'.repeat(60));
1000
- for (const p of topPatterns) {
1001
- console.log(` #${p.rank} ${p.summary}`);
1002
- console.log(` conf=${p.confidence} pr=${p.pageRank} score=${p.score} accessed=${p.accessed}x`);
1003
- }
1004
- console.log('');
1005
- }
1006
-
1007
- if (delta) {
1008
- console.log(` Last Delta (${delta.elapsed} ago)`);
1009
- const sign = v => v > 0 ? `+${v}` : `${v}`;
1010
- console.log(` Nodes: ${sign(delta.nodes)}`);
1011
- console.log(` Edges: ${sign(delta.edges)}`);
1012
- console.log(` Confidence: ${delta.confidenceMean >= 0 ? '+' : ''}${delta.confidenceMean.toFixed(4)}`);
1013
- console.log(` Accesses: ${sign(delta.totalAccess)}`);
1014
- console.log('');
1015
- }
1016
-
1017
- if (trend) {
1018
- console.log(` Trend (${trend.sessions} snapshots)`);
1019
- console.log(` Node growth: ${trend.nodeGrowth >= 0 ? '+' : ''}${trend.nodeGrowth}`);
1020
- console.log(` Edge growth: ${trend.edgeGrowth >= 0 ? '+' : ''}${trend.edgeGrowth}`);
1021
- console.log(` Confidence drift: ${trend.confidenceDrift >= 0 ? '+' : ''}${trend.confidenceDrift.toFixed(4)}`);
1022
- console.log(` Direction: ${trend.direction.toUpperCase()}`);
1023
- console.log('');
1024
- }
1025
-
1026
- if (!delta && !trend) {
1027
- console.log(' No history yet — run more sessions to see deltas and trends.');
1028
- console.log('');
1029
- }
1030
-
1031
- console.log(bar);
1032
- return report;
1033
- }
1034
-
1035
- module.exports = { init, getContext, recordEdit, feedback, consolidate, stats };
1036
-
1037
- // ── CLI entrypoint ──────────────────────────────────────────────────────────
1038
- if (require.main === module) {
1039
- const cmd = process.argv[2];
1040
- const jsonFlag = process.argv.includes('--json');
1041
-
1042
- const cmds = {
1043
- init: () => { const r = init(); console.log(JSON.stringify(r)); },
1044
- stats: () => { stats(jsonFlag); },
1045
- consolidate: () => { const r = consolidate(); console.log(JSON.stringify(r)); },
1046
- };
1047
-
1048
- if (cmd && cmds[cmd]) {
1049
- cmds[cmd]();
1050
- } else {
1051
- console.log('Usage: intelligence.cjs <stats|init|consolidate> [--json]');
1052
- console.log('');
1053
- console.log(' stats Show intelligence diagnostics and trends');
1054
- console.log(' stats --json Output as JSON for programmatic use');
1055
- console.log(' init Build graph and rank entries');
1056
- console.log(' consolidate Process pending insights and recompute');
1057
- }
1058
- }
1
+ #!/usr/bin/env node
2
+ /**
3
+ * Intelligence Layer (ADR-050)
4
+ *
5
+ * Closes the intelligence loop by wiring PageRank-ranked memory into
6
+ * the hook system. Pure CJS — no ESM imports of @claude-flow/memory.
7
+ *
8
+ * Data files (all under .claude-flow/data/):
9
+ * auto-memory-store.json — written by auto-memory-hook.mjs
10
+ * graph-state.json — serialized graph (nodes + edges + pageRanks)
11
+ * ranked-context.json — pre-computed ranked entries for fast lookup
12
+ * pending-insights.jsonl — append-only edit/task log
13
+ */
14
+
15
+ 'use strict';
16
+
17
+ const fs = require('fs');
18
+ const path = require('path');
19
+
20
+ const DATA_DIR = path.join(process.cwd(), '.claude-flow', 'data');
21
+ const STORE_PATH = path.join(DATA_DIR, 'auto-memory-store.json');
22
+ const GRAPH_PATH = path.join(DATA_DIR, 'graph-state.json');
23
+ const RANKED_PATH = path.join(DATA_DIR, 'ranked-context.json');
24
+ const PENDING_PATH = path.join(DATA_DIR, 'pending-insights.jsonl');
25
+ const SESSION_DIR = path.join(process.cwd(), '.claude-flow', 'sessions');
26
+ const SESSION_FILE = path.join(SESSION_DIR, 'current.json');
27
+
28
+ // ── Safety limits (fixes #1530, #1531) ─────────────────────────────────────
29
+ const MAX_DATA_FILE_SIZE = 10 * 1024 * 1024; // 10 MB — skip files larger than this
30
+ const MAX_GRAPH_NODES = 5000; // skip PageRank if graph exceeds this
31
+
32
+ // ── Stop words for trigram matching ──────────────────────────────────────────
33
+
34
+ const STOP_WORDS = new Set([
35
+ 'the', 'a', 'an', 'is', 'are', 'was', 'were', 'be', 'been', 'being',
36
+ 'have', 'has', 'had', 'do', 'does', 'did', 'will', 'would', 'could',
37
+ 'should', 'may', 'might', 'shall', 'can', 'to', 'of', 'in', 'for',
38
+ 'on', 'with', 'at', 'by', 'from', 'as', 'into', 'through', 'during',
39
+ 'before', 'after', 'and', 'but', 'or', 'nor', 'not', 'so', 'yet',
40
+ 'both', 'either', 'neither', 'each', 'every', 'all', 'any', 'few',
41
+ 'more', 'most', 'other', 'some', 'such', 'no', 'only', 'own', 'same',
42
+ 'than', 'too', 'very', 'just', 'because', 'if', 'when', 'which',
43
+ 'who', 'whom', 'this', 'that', 'these', 'those', 'it', 'its',
44
+ ]);
45
+
46
+ // ── Helpers ──────────────────────────────────────────────────────────────────
47
+
48
+ function ensureDataDir() {
49
+ if (!fs.existsSync(DATA_DIR)) fs.mkdirSync(DATA_DIR, { recursive: true });
50
+ }
51
+
52
+ function readJSON(filePath) {
53
+ // Safety: skip files exceeding MAX_DATA_FILE_SIZE (#1531)
54
+ try {
55
+ const stat = fs.statSync(filePath);
56
+ if (stat.size > MAX_DATA_FILE_SIZE) {
57
+ process.stderr.write("[INTELLIGENCE] WARN: Skipping " + path.basename(filePath) + " (" + Math.round(stat.size / 1048576) + "MB exceeds 10MB limit)\n");
58
+ return null;
59
+ }
60
+ } catch { /* file may not exist yet */ }
61
+ try {
62
+ if (fs.existsSync(filePath)) return JSON.parse(fs.readFileSync(filePath, 'utf-8'));
63
+ } catch { /* corrupt file — start fresh */ }
64
+ return null;
65
+ }
66
+
67
+ function writeJSON(filePath, data) {
68
+ ensureDataDir();
69
+ fs.writeFileSync(filePath, JSON.stringify(data, null, 2), 'utf-8');
70
+ }
71
+
72
+ function tokenize(text) {
73
+ if (!text) return [];
74
+ return text.toLowerCase()
75
+ .replace(/[^a-z0-9\s-]/g, ' ')
76
+ .split(/\s+/)
77
+ .filter(w => w.length > 2 && !STOP_WORDS.has(w));
78
+ }
79
+
80
+ function trigrams(words) {
81
+ const t = new Set();
82
+ for (const w of words) {
83
+ for (let i = 0; i <= w.length - 3; i++) t.add(w.slice(i, i + 3));
84
+ }
85
+ return t;
86
+ }
87
+
88
+ function jaccardSimilarity(setA, setB) {
89
+ if (setA.size === 0 && setB.size === 0) return 0;
90
+ let intersection = 0;
91
+ for (const item of setA) { if (setB.has(item)) intersection++; }
92
+ return intersection / (setA.size + setB.size - intersection);
93
+ }
94
+
95
+ // ── Deduplication helper (fixes #1518) ──────────────────────────────────────
96
+
97
+ function deduplicateById(entries) {
98
+ if (!entries || !Array.isArray(entries)) return entries;
99
+ const seen = new Map();
100
+ for (const entry of entries) {
101
+ const id = entry.id || entry.key;
102
+ if (id) {
103
+ seen.set(id, entry);
104
+ } else {
105
+ seen.set(`__no_id_${seen.size}`, entry);
106
+ }
107
+ }
108
+ return Array.from(seen.values());
109
+ }
110
+
111
+ // ADR-095 G6 — content-hash dedup. The April audit measured 5,706 entries
112
+ // in the auto-memory store with only ~20 unique by content; 5,686 dupes
113
+ // were the same MEMORY.md sections imported from sibling project dirs
114
+ // with different IDs. deduplicateById can't catch these (the IDs really
115
+ // are different); we need a content fingerprint.
116
+ //
117
+ // Fast non-cryptographic fingerprint — collisions on 64-bit FNV-1a are
118
+ // vanishingly rare for human prose at the scale of an auto-memory store.
119
+ // Whitespace-normalized so trivially-different formatting doesn't bypass dedup.
120
+ function fingerprintContent(text) {
121
+ if (typeof text !== 'string' || text.length === 0) return '0';
122
+ const norm = text.replace(/\s+/g, ' ').trim().toLowerCase();
123
+ // FNV-1a 64-bit (split into 32-bit halves to stay within Number safe int)
124
+ let h1 = 0x811c9dc5, h2 = 0xcbf29ce4;
125
+ for (let i = 0; i < norm.length; i++) {
126
+ const c = norm.charCodeAt(i);
127
+ h1 ^= c; h1 = Math.imul(h1, 0x01000193) >>> 0;
128
+ h2 ^= c; h2 = Math.imul(h2, 0x100000001b3 & 0xffffffff) >>> 0;
129
+ }
130
+ return `${h1.toString(16)}_${h2.toString(16)}_${norm.length}`;
131
+ }
132
+
133
+ function deduplicateByContent(entries) {
134
+ if (!entries || !Array.isArray(entries)) return entries;
135
+ const seen = new Map();
136
+ for (const entry of entries) {
137
+ const content = entry.content || entry.summary || entry.value || '';
138
+ const fp = fingerprintContent(typeof content === 'string' ? content : JSON.stringify(content));
139
+ if (!seen.has(fp)) {
140
+ seen.set(fp, entry);
141
+ } else {
142
+ // Keep the entry with the higher accessCount or earlier createdAt
143
+ const existing = seen.get(fp);
144
+ const existingAccess = existing.accessCount || 0;
145
+ const candidateAccess = entry.accessCount || 0;
146
+ if (candidateAccess > existingAccess) seen.set(fp, entry);
147
+ }
148
+ }
149
+ return Array.from(seen.values());
150
+ }
151
+
152
+ // ── Session state helpers ────────────────────────────────────────────────────
153
+
154
+ function sessionGet(key) {
155
+ try {
156
+ if (!fs.existsSync(SESSION_FILE)) return null;
157
+ const session = JSON.parse(fs.readFileSync(SESSION_FILE, 'utf-8'));
158
+ return key ? (session.context || {})[key] : session.context;
159
+ } catch { return null; }
160
+ }
161
+
162
+ function sessionSet(key, value) {
163
+ try {
164
+ if (!fs.existsSync(SESSION_DIR)) fs.mkdirSync(SESSION_DIR, { recursive: true });
165
+ let session = {};
166
+ if (fs.existsSync(SESSION_FILE)) {
167
+ session = JSON.parse(fs.readFileSync(SESSION_FILE, 'utf-8'));
168
+ }
169
+ if (!session.context) session.context = {};
170
+ session.context[key] = value;
171
+ session.updatedAt = new Date().toISOString();
172
+ fs.writeFileSync(SESSION_FILE, JSON.stringify(session, null, 2), 'utf-8');
173
+ } catch { /* best effort */ }
174
+ }
175
+
176
+ // ── PageRank ─────────────────────────────────────────────────────────────────
177
+
178
+ function computePageRank(nodes, edges, damping, maxIter) {
179
+ damping = damping || 0.85;
180
+ maxIter = maxIter || 30;
181
+
182
+ const ids = Object.keys(nodes);
183
+ const n = ids.length;
184
+ if (n === 0) return {};
185
+
186
+ // Build adjacency: outgoing edges per node
187
+ const outLinks = {};
188
+ const inLinks = {};
189
+ for (const id of ids) { outLinks[id] = []; inLinks[id] = []; }
190
+ for (const edge of edges) {
191
+ if (outLinks[edge.sourceId]) outLinks[edge.sourceId].push(edge.targetId);
192
+ if (inLinks[edge.targetId]) inLinks[edge.targetId].push(edge.sourceId);
193
+ }
194
+
195
+ // Initialize ranks
196
+ const ranks = {};
197
+ for (const id of ids) ranks[id] = 1 / n;
198
+
199
+ // Power iteration (with dangling node redistribution)
200
+ for (let iter = 0; iter < maxIter; iter++) {
201
+ const newRanks = {};
202
+ let diff = 0;
203
+
204
+ // Collect rank from dangling nodes (no outgoing edges)
205
+ let danglingSum = 0;
206
+ for (const id of ids) {
207
+ if (outLinks[id].length === 0) danglingSum += ranks[id];
208
+ }
209
+
210
+ for (const id of ids) {
211
+ let sum = 0;
212
+ for (const src of inLinks[id]) {
213
+ const outCount = outLinks[src].length;
214
+ if (outCount > 0) sum += ranks[src] / outCount;
215
+ }
216
+ // Dangling rank distributed evenly + teleport
217
+ newRanks[id] = (1 - damping) / n + damping * (sum + danglingSum / n);
218
+ diff += Math.abs(newRanks[id] - ranks[id]);
219
+ }
220
+
221
+ for (const id of ids) ranks[id] = newRanks[id];
222
+ if (diff < 1e-6) break; // converged
223
+ }
224
+
225
+ return ranks;
226
+ }
227
+
228
+ // ── Edge building ────────────────────────────────────────────────────────────
229
+
230
+ function buildEdges(entries) {
231
+ const edges = [];
232
+ const byCategory = {};
233
+
234
+ for (const entry of entries) {
235
+ const cat = entry.category || entry.namespace || 'default';
236
+ if (!byCategory[cat]) byCategory[cat] = [];
237
+ byCategory[cat].push(entry);
238
+ }
239
+
240
+ // Temporal edges: entries from same sourceFile
241
+ const byFile = {};
242
+ for (const entry of entries) {
243
+ const file = (entry.metadata && entry.metadata.sourceFile) || null;
244
+ if (file) {
245
+ if (!byFile[file]) byFile[file] = [];
246
+ byFile[file].push(entry);
247
+ }
248
+ }
249
+ for (const file of Object.keys(byFile)) {
250
+ const group = byFile[file];
251
+ for (let i = 0; i < group.length - 1; i++) {
252
+ edges.push({
253
+ sourceId: group[i].id,
254
+ targetId: group[i + 1].id,
255
+ type: 'temporal',
256
+ weight: 0.5,
257
+ });
258
+ }
259
+ }
260
+
261
+ // Similarity edges within categories (Jaccard > 0.3).
262
+ // ADR-095 G6 perf: hoist the trigram computation outside the inner
263
+ // loop. Previously we re-tokenized + re-trigrammed group[j] for every
264
+ // i — O(n²) extra work for nothing. Now compute once per entry.
265
+ for (const cat of Object.keys(byCategory)) {
266
+ const group = byCategory[cat];
267
+ if (group.length < 2) continue;
268
+
269
+ // Cache trigram sets for every entry in the group.
270
+ const triCache = new Array(group.length);
271
+ for (let i = 0; i < group.length; i++) {
272
+ triCache[i] = trigrams(tokenize(group[i].content || group[i].summary || ''));
273
+ }
274
+
275
+ for (let i = 0; i < group.length; i++) {
276
+ const triA = triCache[i];
277
+ for (let j = i + 1; j < group.length; j++) {
278
+ const sim = jaccardSimilarity(triA, triCache[j]);
279
+ if (sim > 0.3) {
280
+ edges.push({
281
+ sourceId: group[i].id,
282
+ targetId: group[j].id,
283
+ type: 'similar',
284
+ weight: sim,
285
+ });
286
+ }
287
+ }
288
+ }
289
+ }
290
+
291
+ return edges;
292
+ }
293
+
294
+ // ── Bootstrap from MEMORY.md files ───────────────────────────────────────────
295
+
296
+ /**
297
+ * If auto-memory-store.json is empty, bootstrap by parsing MEMORY.md and
298
+ * topic files from the auto-memory directory. This removes the dependency
299
+ * on @claude-flow/memory for the initial seed.
300
+ */
301
+ function bootstrapFromMemoryFiles() {
302
+ const entries = [];
303
+ const cwd = process.cwd();
304
+
305
+ // Search for auto-memory directories
306
+ const candidates = [
307
+ // Claude Code auto-memory (project-scoped)
308
+ path.join(require('os').homedir(), '.claude', 'projects'),
309
+ // Local project memory
310
+ path.join(cwd, '.claude-flow', 'memory'),
311
+ path.join(cwd, '.claude', 'memory'),
312
+ ];
313
+
314
+ // Find MEMORY.md in project-scoped dirs
315
+ for (const base of candidates) {
316
+ if (!fs.existsSync(base)) continue;
317
+
318
+ // For the projects dir, scope to CURRENT project only (not all 51+ dirs)
319
+ if (base.endsWith('projects')) {
320
+ try {
321
+ // Match Claude Code's project-dir slug: every non-alphanumeric char -> '-'
322
+ // (e.g. "G:\\My Drive\\TJ_Vault" -> "G--My-Drive-TJ-Vault"). The old version
323
+ // only handled POSIX '/', so on Windows the slug kept ':' and '\\' and never
324
+ // matched the real <projects>/<slug>/memory dir — bootstrap found nothing (FIX 5).
325
+ const projectSlug = cwd.replace(/[^a-zA-Z0-9]/g, '-');
326
+ const memDir = path.join(base, projectSlug, 'memory');
327
+ if (fs.existsSync(memDir)) {
328
+ parseMemoryDir(memDir, entries);
329
+ }
330
+ } catch { /* skip */ }
331
+ } else if (fs.existsSync(base)) {
332
+ parseMemoryDir(base, entries);
333
+ }
334
+ }
335
+
336
+ return entries;
337
+ }
338
+
339
+ // Truncation transparency (FIX 4): mark the cut with an ellipsis and warn under
340
+ // debug, so later reasoning isn't silently built on severed text.
341
+ const CLIP_DEBUG = !!(process.env.RUFLO_DEBUG || process.env.DEBUG);
342
+ function clip(text, max, label) {
343
+ text = text == null ? '' : String(text);
344
+ if (text.length <= max) return text;
345
+ if (CLIP_DEBUG) process.stderr.write(`[INTELLIGENCE] WARN: truncated ${label || 'value'} from ${text.length} to ${max} chars\n`);
346
+ return text.slice(0, max - 1) + '…';
347
+ }
348
+
349
+ function parseMemoryDir(dir, entries) {
350
+ try {
351
+ const files = fs.readdirSync(dir).filter(f => f.endsWith('.md'));
352
+ for (const file of files) {
353
+ const filePath = path.join(dir, file);
354
+ const content = fs.readFileSync(filePath, 'utf-8');
355
+ if (!content.trim()) continue;
356
+
357
+ // Parse markdown sections as separate entries
358
+ const sections = content.split(/^##?\s+/m).filter(Boolean);
359
+ for (let sIdx = 0; sIdx < sections.length; sIdx++) {
360
+ const section = sections[sIdx];
361
+ const lines = section.trim().split('\n');
362
+ const title = lines[0].trim();
363
+ const body = lines.slice(1).join('\n').trim();
364
+ if (!body || body.length < 10) continue;
365
+
366
+ const id = `mem-${file.replace('.md', '')}-${title.replace(/[^a-z0-9]/gi, '-').toLowerCase().slice(0, 30)}-${sIdx}`;
367
+ entries.push({
368
+ id,
369
+ key: title.toLowerCase().replace(/[^a-z0-9]+/g, '-').slice(0, 50),
370
+ content: clip(body, 500, 'memory content'),
371
+ summary: title,
372
+ namespace: file === 'MEMORY.md' ? 'core' : file.replace('.md', ''),
373
+ type: 'semantic',
374
+ metadata: { sourceFile: filePath, bootstrapped: true },
375
+ createdAt: Date.now(),
376
+ });
377
+ }
378
+ }
379
+ } catch { /* skip unreadable dirs */ }
380
+ }
381
+
382
+ // ── Exported functions ───────────────────────────────────────────────────────
383
+
384
+ /**
385
+ * init() — Called from session-restore. Budget: <200ms.
386
+ * Reads auto-memory-store.json, builds graph, computes PageRank, writes caches.
387
+ * If store is empty, bootstraps from MEMORY.md files directly.
388
+ */
389
+ function init() {
390
+ ensureDataDir();
391
+
392
+ // Check if graph-state.json is fresh (within 60s of store)
393
+ const graphState = readJSON(GRAPH_PATH);
394
+ let store = readJSON(STORE_PATH);
395
+
396
+ // Bootstrap from MEMORY.md files if store is empty
397
+ if (!store || !Array.isArray(store) || store.length === 0) {
398
+ const bootstrapped = bootstrapFromMemoryFiles();
399
+ if (bootstrapped.length > 0) {
400
+ store = bootstrapped;
401
+ writeJSON(STORE_PATH, store);
402
+ } else {
403
+ return { nodes: 0, edges: 0, message: 'No memory entries to index' };
404
+ }
405
+ }
406
+
407
+ // Deduplicate store entries by ID (fixes #1518 — 194MB → ~79KB)
408
+ let deduped = deduplicateById(store);
409
+ // ADR-095 G6: also dedupe by content fingerprint. The April audit
410
+ // measured 5,706 entries with only ~20 unique by content because the
411
+ // same MEMORY.md sections get imported from sibling project dirs with
412
+ // different IDs. deduplicateById can't catch that; deduplicateByContent
413
+ // can. Cuts the graph from O(n²) over near-identical duplicates down
414
+ // to O(unique²), which is the difference between a 100MB graph-state
415
+ // and a kilobytes-scale one for typical workloads.
416
+ const beforeContentDedup = deduped.length;
417
+ deduped = deduplicateByContent(deduped);
418
+ if (deduped.length < store.length) {
419
+ process.stderr.write(
420
+ `[INTELLIGENCE] Deduped store: ${store.length} -> ${deduped.length} entries ` +
421
+ `(by-id: ${store.length - beforeContentDedup} dropped, by-content: ${beforeContentDedup - deduped.length} dropped)\n`
422
+ );
423
+ writeJSON(STORE_PATH, deduped);
424
+ }
425
+
426
+ // Skip rebuild if graph is fresh and store hasn't changed
427
+ if (graphState && graphState.nodeCount === deduped.length) {
428
+ const age = Date.now() - (graphState.updatedAt || 0);
429
+ if (age < 60000) {
430
+ return {
431
+ nodes: graphState.nodeCount || Object.keys(graphState.nodes || {}).length,
432
+ edges: (graphState.edges || []).length,
433
+ message: 'Graph cache hit',
434
+ };
435
+ }
436
+ }
437
+
438
+ // Build nodes from deduped entries
439
+ const nodes = {};
440
+ for (const entry of deduped) {
441
+ const id = entry.id || entry.key || `entry-${Math.random().toString(36).slice(2, 8)}`;
442
+ nodes[id] = {
443
+ id,
444
+ category: entry.namespace || entry.type || 'default',
445
+ confidence: (entry.metadata && entry.metadata.confidence) || 0.5,
446
+ accessCount: (entry.metadata && entry.metadata.accessCount) || 0,
447
+ createdAt: entry.createdAt || Date.now(),
448
+ };
449
+ // Ensure entry has id for edge building
450
+ entry.id = id;
451
+ }
452
+
453
+ // Build edges
454
+ const edges = buildEdges(deduped);
455
+
456
+ // Compute PageRank (skip if graph too large — #1531)
457
+ const nodeCount = Object.keys(nodes).length;
458
+ let pageRanks = {};
459
+ if (nodeCount > MAX_GRAPH_NODES) {
460
+ process.stderr.write("[INTELLIGENCE] WARN: Graph has " + nodeCount + " nodes (>" + MAX_GRAPH_NODES + "), skipping PageRank\n");
461
+ for (const id of Object.keys(nodes)) pageRanks[id] = 1 / nodeCount;
462
+ } else {
463
+ pageRanks = computePageRank(nodes, edges, 0.85, 30);
464
+ }
465
+
466
+ // Write graph state
467
+ const graph = {
468
+ version: 1,
469
+ updatedAt: Date.now(),
470
+ nodeCount: Object.keys(nodes).length,
471
+ nodes,
472
+ edges,
473
+ pageRanks,
474
+ };
475
+ writeJSON(GRAPH_PATH, graph);
476
+
477
+ // Build ranked context for fast lookup
478
+ const rankedEntries = deduped.map(entry => {
479
+ const id = entry.id;
480
+ const content = entry.content || entry.value || '';
481
+ const summary = entry.summary || entry.key || '';
482
+ const words = tokenize(content + ' ' + summary);
483
+ return {
484
+ id,
485
+ content,
486
+ summary,
487
+ category: entry.namespace || entry.type || 'default',
488
+ confidence: nodes[id] ? nodes[id].confidence : 0.5,
489
+ pageRank: pageRanks[id] || 0,
490
+ accessCount: nodes[id] ? nodes[id].accessCount : 0,
491
+ words,
492
+ };
493
+ }).sort((a, b) => {
494
+ const scoreA = 0.6 * a.pageRank + 0.4 * a.confidence;
495
+ const scoreB = 0.6 * b.pageRank + 0.4 * b.confidence;
496
+ return scoreB - scoreA;
497
+ });
498
+
499
+ const ranked = {
500
+ version: 1,
501
+ computedAt: Date.now(),
502
+ entries: rankedEntries,
503
+ };
504
+ writeJSON(RANKED_PATH, ranked);
505
+
506
+ return {
507
+ nodes: Object.keys(nodes).length,
508
+ edges: edges.length,
509
+ message: 'Graph built and ranked',
510
+ };
511
+ }
512
+
513
+ /**
514
+ * getContext(prompt) — Called from route. Budget: <15ms.
515
+ * Matches prompt to ranked entries, returns top-5 formatted context.
516
+ */
517
+ function getContext(prompt) {
518
+ if (!prompt) return null;
519
+
520
+ const ranked = readJSON(RANKED_PATH);
521
+ if (!ranked || !ranked.entries || ranked.entries.length === 0) return null;
522
+
523
+ const promptWords = tokenize(prompt);
524
+ if (promptWords.length === 0) return null;
525
+ const promptTrigrams = trigrams(promptWords);
526
+
527
+ const ALPHA = 0.6; // content match weight
528
+ const MIN_THRESHOLD = 0.05;
529
+ const TOP_K = 5;
530
+
531
+ // Score each entry
532
+ const scored = [];
533
+ for (const entry of ranked.entries) {
534
+ const entryTrigrams = trigrams(entry.words || []);
535
+ const contentMatch = jaccardSimilarity(promptTrigrams, entryTrigrams);
536
+ const score = ALPHA * contentMatch + (1 - ALPHA) * (entry.pageRank || 0);
537
+ if (score >= MIN_THRESHOLD) {
538
+ scored.push({ ...entry, score });
539
+ }
540
+ }
541
+
542
+ if (scored.length === 0) return null;
543
+
544
+ // Sort by score descending, take top-K
545
+ scored.sort((a, b) => b.score - a.score);
546
+ const topEntries = scored.slice(0, TOP_K);
547
+
548
+ // Boost previously matched patterns (implicit success: user continued working)
549
+ const prevMatched = sessionGet('lastMatchedPatterns');
550
+
551
+ // Store NEW matched IDs in session state for feedback
552
+ const matchedIds = topEntries.map(e => e.id);
553
+ sessionSet('lastMatchedPatterns', matchedIds);
554
+
555
+ // Only boost previous if they differ from current (avoid double-boosting)
556
+ if (prevMatched && Array.isArray(prevMatched)) {
557
+ const newSet = new Set(matchedIds);
558
+ const toBoost = prevMatched.filter(id => !newSet.has(id));
559
+ if (toBoost.length > 0) boostConfidence(toBoost, 0.03);
560
+ }
561
+
562
+ // Format output
563
+ const lines = ['[INTELLIGENCE] Relevant patterns for this task:'];
564
+ for (let i = 0; i < topEntries.length; i++) {
565
+ const e = topEntries[i];
566
+ const display = (e.summary || e.content || '').slice(0, 80);
567
+ const accessed = e.accessCount || 0;
568
+ lines.push(` * (${e.score.toFixed(2)}) ${display} [rank #${i + 1}, ${accessed}x accessed]`);
569
+ }
570
+
571
+ return lines.join('\n');
572
+ }
573
+
574
+ /**
575
+ * recordEdit(file) — Called from post-edit. Budget: <2ms.
576
+ * Appends to pending-insights.jsonl.
577
+ */
578
+ function recordEdit(file, success) {
579
+ ensureDataDir();
580
+ const entry = JSON.stringify({
581
+ type: 'edit',
582
+ file: file || 'unknown',
583
+ // ADR-174: record failures too, not just successes — the learning substrate
584
+ // needs negative examples. Defaults true; an explicit false is a failed edit.
585
+ success: success !== false,
586
+ timestamp: Date.now(),
587
+ sessionId: sessionGet('sessionId') || null,
588
+ });
589
+ fs.appendFileSync(PENDING_PATH, entry + '\n', 'utf-8');
590
+ // Runaway-storage guard: pending-insights is append-only and only drained by
591
+ // consolidation. If it grows past ~512KB (thousands of un-consolidated edits
592
+ // — e.g. the daemon never ran), keep only the most recent 2000 lines so it
593
+ // can never grow unbounded. Cheap (a statSync per edit; rewrite only when over).
594
+ try {
595
+ if (fs.statSync(PENDING_PATH).size > 512 * 1024) {
596
+ const lines = fs.readFileSync(PENDING_PATH, 'utf-8').split('\n').filter(Boolean);
597
+ if (lines.length > 2000) fs.writeFileSync(PENDING_PATH, lines.slice(-2000).join('\n') + '\n', 'utf-8');
598
+ }
599
+ } catch (e) { /* non-fatal */ }
600
+ }
601
+
602
+ /**
603
+ * feedback(success) — Called from post-task. Budget: <10ms.
604
+ * Boosts or decays confidence for last-matched patterns.
605
+ */
606
+ function feedback(success) {
607
+ const matchedIds = sessionGet('lastMatchedPatterns');
608
+ if (!matchedIds || !Array.isArray(matchedIds)) return;
609
+
610
+ const amount = success ? 0.05 : -0.02;
611
+ boostConfidence(matchedIds, amount);
612
+ }
613
+
614
+ function boostConfidence(ids, amount) {
615
+ const ranked = readJSON(RANKED_PATH);
616
+ if (!ranked || !ranked.entries) return;
617
+
618
+ let changed = false;
619
+ for (const entry of ranked.entries) {
620
+ if (ids.includes(entry.id)) {
621
+ entry.confidence = Math.max(0, Math.min(1, (entry.confidence || 0.5) + amount));
622
+ entry.accessCount = (entry.accessCount || 0) + 1;
623
+ changed = true;
624
+ }
625
+ }
626
+
627
+ if (changed) writeJSON(RANKED_PATH, ranked);
628
+
629
+ // Also update graph-state confidence
630
+ const graph = readJSON(GRAPH_PATH);
631
+ if (graph && graph.nodes) {
632
+ for (const id of ids) {
633
+ if (graph.nodes[id]) {
634
+ graph.nodes[id].confidence = Math.max(0, Math.min(1, (graph.nodes[id].confidence || 0.5) + amount));
635
+ graph.nodes[id].accessCount = (graph.nodes[id].accessCount || 0) + 1;
636
+ }
637
+ }
638
+ writeJSON(GRAPH_PATH, graph);
639
+ }
640
+ }
641
+
642
+ /**
643
+ * consolidate() — Called from session-end. Budget: <500ms.
644
+ * Processes pending insights, rebuilds edges, recomputes PageRank.
645
+ */
646
+ function consolidate() {
647
+ ensureDataDir();
648
+
649
+ let store = readJSON(STORE_PATH);
650
+ if (!store || !Array.isArray(store)) {
651
+ return { entries: 0, edges: 0, newEntries: 0, message: 'No store to consolidate' };
652
+ }
653
+
654
+ // Deduplicate store entries by ID before processing (fixes #1518)
655
+ const preDedupCount = store.length;
656
+ store = deduplicateById(store);
657
+
658
+ // 1. Process pending insights
659
+ let newEntries = 0;
660
+ if (fs.existsSync(PENDING_PATH)) {
661
+ const lines = fs.readFileSync(PENDING_PATH, 'utf-8').trim().split('\n').filter(Boolean);
662
+ const editCounts = {};
663
+ for (const line of lines) {
664
+ try {
665
+ const insight = JSON.parse(line);
666
+ if (insight.file) {
667
+ editCounts[insight.file] = (editCounts[insight.file] || 0) + 1;
668
+ }
669
+ } catch { /* skip malformed */ }
670
+ }
671
+
672
+ // Create entries for frequently-edited files (3+ edits)
673
+ for (const [file, count] of Object.entries(editCounts)) {
674
+ if (count >= 3) {
675
+ const exists = store.some(e =>
676
+ (e.metadata && e.metadata.sourceFile === file && e.metadata.autoGenerated)
677
+ );
678
+ if (!exists) {
679
+ store.push({
680
+ id: `insight-${Date.now()}-${Math.random().toString(36).slice(2, 6)}`,
681
+ key: `frequent-edit-${path.basename(file)}`,
682
+ content: `File ${file} was edited ${count} times this session — likely a hot path worth monitoring.`,
683
+ summary: `Frequently edited: ${path.basename(file)} (${count}x)`,
684
+ namespace: 'insights',
685
+ type: 'procedural',
686
+ metadata: { sourceFile: file, editCount: count, autoGenerated: true },
687
+ createdAt: Date.now(),
688
+ });
689
+ newEntries++;
690
+ }
691
+ }
692
+ }
693
+
694
+ // Clear pending
695
+ fs.writeFileSync(PENDING_PATH, '', 'utf-8');
696
+ }
697
+
698
+ // 2. Confidence decay for unaccessed entries
699
+ const graph = readJSON(GRAPH_PATH);
700
+ if (graph && graph.nodes) {
701
+ const now = Date.now();
702
+ for (const id of Object.keys(graph.nodes)) {
703
+ const node = graph.nodes[id];
704
+ const hoursSinceCreation = (now - (node.createdAt || now)) / (1000 * 60 * 60);
705
+ if (node.accessCount === 0 && hoursSinceCreation > 24) {
706
+ node.confidence = Math.max(0.05, (node.confidence || 0.5) - 0.005 * Math.floor(hoursSinceCreation / 24));
707
+ }
708
+ }
709
+ }
710
+
711
+ // 3. Rebuild edges with updated store
712
+ for (const entry of store) {
713
+ if (!entry.id) entry.id = `entry-${Math.random().toString(36).slice(2, 8)}`;
714
+ }
715
+ const edges = buildEdges(store);
716
+
717
+ // 4. Build updated nodes
718
+ const nodes = {};
719
+ for (const entry of store) {
720
+ nodes[entry.id] = {
721
+ id: entry.id,
722
+ category: entry.namespace || entry.type || 'default',
723
+ confidence: (graph && graph.nodes && graph.nodes[entry.id])
724
+ ? graph.nodes[entry.id].confidence
725
+ : (entry.metadata && entry.metadata.confidence) || 0.5,
726
+ accessCount: (graph && graph.nodes && graph.nodes[entry.id])
727
+ ? graph.nodes[entry.id].accessCount
728
+ : (entry.metadata && entry.metadata.accessCount) || 0,
729
+ createdAt: entry.createdAt || Date.now(),
730
+ };
731
+ }
732
+
733
+ // 5. Recompute PageRank (skip if graph too large — #1531)
734
+ const nodeCount = Object.keys(nodes).length;
735
+ let pageRanks = {};
736
+ if (nodeCount > MAX_GRAPH_NODES) {
737
+ process.stderr.write("[INTELLIGENCE] WARN: Graph has " + nodeCount + " nodes (>" + MAX_GRAPH_NODES + "), skipping PageRank in consolidate\n");
738
+ for (const id of Object.keys(nodes)) pageRanks[id] = 1 / nodeCount;
739
+ } else {
740
+ pageRanks = computePageRank(nodes, edges, 0.85, 30);
741
+ }
742
+
743
+ // 6. Write updated graph
744
+ writeJSON(GRAPH_PATH, {
745
+ version: 1,
746
+ updatedAt: Date.now(),
747
+ nodeCount: Object.keys(nodes).length,
748
+ nodes,
749
+ edges,
750
+ pageRanks,
751
+ });
752
+
753
+ // 7. Write updated ranked context
754
+ const rankedEntries = store.map(entry => {
755
+ const id = entry.id;
756
+ const content = entry.content || entry.value || '';
757
+ const summary = entry.summary || entry.key || '';
758
+ const words = tokenize(content + ' ' + summary);
759
+ return {
760
+ id,
761
+ content,
762
+ summary,
763
+ category: entry.namespace || entry.type || 'default',
764
+ confidence: nodes[id] ? nodes[id].confidence : 0.5,
765
+ pageRank: pageRanks[id] || 0,
766
+ accessCount: nodes[id] ? nodes[id].accessCount : 0,
767
+ words,
768
+ };
769
+ }).sort((a, b) => {
770
+ const scoreA = 0.6 * a.pageRank + 0.4 * a.confidence;
771
+ const scoreB = 0.6 * b.pageRank + 0.4 * b.confidence;
772
+ return scoreB - scoreA;
773
+ });
774
+
775
+ writeJSON(RANKED_PATH, {
776
+ version: 1,
777
+ computedAt: Date.now(),
778
+ entries: rankedEntries,
779
+ });
780
+
781
+ // 8. Persist updated store (deduped or with new insight entries)
782
+ if (newEntries > 0 || store.length < preDedupCount) writeJSON(STORE_PATH, store);
783
+
784
+ // 9. Save snapshot for delta tracking
785
+ const updatedGraph = readJSON(GRAPH_PATH);
786
+ const updatedRanked = readJSON(RANKED_PATH);
787
+ saveSnapshot(updatedGraph, updatedRanked);
788
+
789
+ return {
790
+ entries: store.length,
791
+ edges: edges.length,
792
+ newEntries,
793
+ message: 'Consolidated',
794
+ };
795
+ }
796
+
797
+ // ── Snapshot for delta tracking ─────────────────────────────────────────────
798
+
799
+ const SNAPSHOT_PATH = path.join(DATA_DIR, 'intelligence-snapshot.json');
800
+
801
+ function saveSnapshot(graph, ranked) {
802
+ const snap = {
803
+ timestamp: Date.now(),
804
+ nodes: graph ? Object.keys(graph.nodes || {}).length : 0,
805
+ edges: graph ? (graph.edges || []).length : 0,
806
+ pageRankSum: 0,
807
+ confidences: [],
808
+ accessCounts: [],
809
+ topPatterns: [],
810
+ };
811
+
812
+ if (graph && graph.pageRanks) {
813
+ for (const v of Object.values(graph.pageRanks)) snap.pageRankSum += v;
814
+ }
815
+ if (graph && graph.nodes) {
816
+ for (const n of Object.values(graph.nodes)) {
817
+ snap.confidences.push(n.confidence || 0.5);
818
+ snap.accessCounts.push(n.accessCount || 0);
819
+ }
820
+ }
821
+ if (ranked && ranked.entries) {
822
+ snap.topPatterns = ranked.entries.slice(0, 10).map(e => ({
823
+ id: e.id,
824
+ summary: (e.summary || '').slice(0, 60),
825
+ confidence: e.confidence || 0.5,
826
+ pageRank: e.pageRank || 0,
827
+ accessCount: e.accessCount || 0,
828
+ }));
829
+ }
830
+
831
+ // Keep history: append to array, cap at 50
832
+ let history = readJSON(SNAPSHOT_PATH);
833
+ if (!Array.isArray(history)) history = [];
834
+ history.push(snap);
835
+ if (history.length > 50) history = history.slice(-50);
836
+ writeJSON(SNAPSHOT_PATH, history);
837
+ }
838
+
839
+ /**
840
+ * stats() — Diagnostic report showing intelligence health and improvement.
841
+ * Can be called as: node intelligence.cjs stats [--json]
842
+ */
843
+ function stats(outputJson) {
844
+ const graph = readJSON(GRAPH_PATH);
845
+ const ranked = readJSON(RANKED_PATH);
846
+ const history = readJSON(SNAPSHOT_PATH) || [];
847
+ const pending = fs.existsSync(PENDING_PATH)
848
+ ? fs.readFileSync(PENDING_PATH, 'utf-8').trim().split('\n').filter(Boolean).length
849
+ : 0;
850
+
851
+ // Current state
852
+ const nodes = graph ? Object.keys(graph.nodes || {}).length : 0;
853
+ const edges = graph ? (graph.edges || []).length : 0;
854
+ const density = nodes > 1 ? (2 * edges) / (nodes * (nodes - 1)) : 0;
855
+
856
+ // Confidence distribution
857
+ const confidences = [];
858
+ const accessCounts = [];
859
+ if (graph && graph.nodes) {
860
+ for (const n of Object.values(graph.nodes)) {
861
+ confidences.push(n.confidence || 0.5);
862
+ accessCounts.push(n.accessCount || 0);
863
+ }
864
+ }
865
+ confidences.sort((a, b) => a - b);
866
+ const confMin = confidences.length ? confidences[0] : 0;
867
+ const confMax = confidences.length ? confidences[confidences.length - 1] : 0;
868
+ const confMean = confidences.length ? confidences.reduce((s, c) => s + c, 0) / confidences.length : 0;
869
+ const confMedian = confidences.length ? confidences[Math.floor(confidences.length / 2)] : 0;
870
+
871
+ // Access stats
872
+ const totalAccess = accessCounts.reduce((s, c) => s + c, 0);
873
+ const accessedCount = accessCounts.filter(c => c > 0).length;
874
+
875
+ // PageRank stats
876
+ let prSum = 0, prMax = 0, prMaxId = '';
877
+ if (graph && graph.pageRanks) {
878
+ for (const [id, pr] of Object.entries(graph.pageRanks)) {
879
+ prSum += pr;
880
+ if (pr > prMax) { prMax = pr; prMaxId = id; }
881
+ }
882
+ }
883
+
884
+ // Top patterns by composite score
885
+ const topPatterns = (ranked && ranked.entries || []).slice(0, 10).map((e, i) => ({
886
+ rank: i + 1,
887
+ summary: (e.summary || '').slice(0, 60),
888
+ confidence: (e.confidence || 0.5).toFixed(3),
889
+ pageRank: (e.pageRank || 0).toFixed(4),
890
+ accessed: e.accessCount || 0,
891
+ score: (0.6 * (e.pageRank || 0) + 0.4 * (e.confidence || 0.5)).toFixed(4),
892
+ }));
893
+
894
+ // Edge type breakdown
895
+ const edgeTypes = {};
896
+ if (graph && graph.edges) {
897
+ for (const e of graph.edges) {
898
+ edgeTypes[e.type || 'unknown'] = (edgeTypes[e.type || 'unknown'] || 0) + 1;
899
+ }
900
+ }
901
+
902
+ // Delta from previous snapshot
903
+ let delta = null;
904
+ if (history.length >= 2) {
905
+ const prev = history[history.length - 2];
906
+ const curr = history[history.length - 1];
907
+ const elapsed = (curr.timestamp - prev.timestamp) / 1000;
908
+ const prevConfMean = prev.confidences.length
909
+ ? prev.confidences.reduce((s, c) => s + c, 0) / prev.confidences.length : 0;
910
+ const currConfMean = curr.confidences.length
911
+ ? curr.confidences.reduce((s, c) => s + c, 0) / curr.confidences.length : 0;
912
+ const prevAccess = prev.accessCounts.reduce((s, c) => s + c, 0);
913
+ const currAccess = curr.accessCounts.reduce((s, c) => s + c, 0);
914
+
915
+ delta = {
916
+ elapsed: elapsed < 3600 ? `${Math.round(elapsed / 60)}m` : `${(elapsed / 3600).toFixed(1)}h`,
917
+ nodes: curr.nodes - prev.nodes,
918
+ edges: curr.edges - prev.edges,
919
+ confidenceMean: currConfMean - prevConfMean,
920
+ totalAccess: currAccess - prevAccess,
921
+ };
922
+ }
923
+
924
+ // Trend over all history
925
+ let trend = null;
926
+ if (history.length >= 3) {
927
+ const first = history[0];
928
+ const last = history[history.length - 1];
929
+ const sessions = history.length;
930
+ const firstConfMean = first.confidences.length
931
+ ? first.confidences.reduce((s, c) => s + c, 0) / first.confidences.length : 0;
932
+ const lastConfMean = last.confidences.length
933
+ ? last.confidences.reduce((s, c) => s + c, 0) / last.confidences.length : 0;
934
+ trend = {
935
+ sessions,
936
+ nodeGrowth: last.nodes - first.nodes,
937
+ edgeGrowth: last.edges - first.edges,
938
+ confidenceDrift: lastConfMean - firstConfMean,
939
+ direction: lastConfMean > firstConfMean ? 'improving' :
940
+ lastConfMean < firstConfMean ? 'declining' : 'stable',
941
+ };
942
+ }
943
+
944
+ const report = {
945
+ graph: { nodes, edges, density: +density.toFixed(4) },
946
+ confidence: {
947
+ min: +confMin.toFixed(3), max: +confMax.toFixed(3),
948
+ mean: +confMean.toFixed(3), median: +confMedian.toFixed(3),
949
+ },
950
+ access: { total: totalAccess, patternsAccessed: accessedCount, patternsNeverAccessed: nodes - accessedCount },
951
+ pageRank: { sum: +prSum.toFixed(4), topNode: prMaxId, topNodeRank: +prMax.toFixed(4) },
952
+ edgeTypes,
953
+ pendingInsights: pending,
954
+ snapshots: history.length,
955
+ topPatterns,
956
+ delta,
957
+ trend,
958
+ };
959
+
960
+ if (outputJson) {
961
+ console.log(JSON.stringify(report, null, 2));
962
+ return report;
963
+ }
964
+
965
+ // Human-readable output
966
+ const bar = '+' + '-'.repeat(62) + '+';
967
+ console.log(bar);
968
+ console.log('|' + ' Intelligence Diagnostics (ADR-050)'.padEnd(62) + '|');
969
+ console.log(bar);
970
+ console.log('');
971
+
972
+ console.log(' Graph');
973
+ console.log(` Nodes: ${nodes}`);
974
+ console.log(` Edges: ${edges} (${Object.entries(edgeTypes).map(([t,c]) => `${c} ${t}`).join(', ') || 'none'})`);
975
+ console.log(` Density: ${(density * 100).toFixed(1)}%`);
976
+ console.log('');
977
+
978
+ console.log(' Confidence');
979
+ console.log(` Min: ${confMin.toFixed(3)}`);
980
+ console.log(` Max: ${confMax.toFixed(3)}`);
981
+ console.log(` Mean: ${confMean.toFixed(3)}`);
982
+ console.log(` Median: ${confMedian.toFixed(3)}`);
983
+ console.log('');
984
+
985
+ console.log(' Access');
986
+ console.log(` Total accesses: ${totalAccess}`);
987
+ console.log(` Patterns used: ${accessedCount}/${nodes}`);
988
+ console.log(` Never accessed: ${nodes - accessedCount}`);
989
+ console.log(` Pending insights: ${pending}`);
990
+ console.log('');
991
+
992
+ console.log(' PageRank');
993
+ console.log(` Sum: ${prSum.toFixed(4)} (should be ~1.0)`);
994
+ console.log(` Top node: ${prMaxId || '(none)'} (${prMax.toFixed(4)})`);
995
+ console.log('');
996
+
997
+ if (topPatterns.length > 0) {
998
+ console.log(' Top Patterns (by composite score)');
999
+ console.log(' ' + '-'.repeat(60));
1000
+ for (const p of topPatterns) {
1001
+ console.log(` #${p.rank} ${p.summary}`);
1002
+ console.log(` conf=${p.confidence} pr=${p.pageRank} score=${p.score} accessed=${p.accessed}x`);
1003
+ }
1004
+ console.log('');
1005
+ }
1006
+
1007
+ if (delta) {
1008
+ console.log(` Last Delta (${delta.elapsed} ago)`);
1009
+ const sign = v => v > 0 ? `+${v}` : `${v}`;
1010
+ console.log(` Nodes: ${sign(delta.nodes)}`);
1011
+ console.log(` Edges: ${sign(delta.edges)}`);
1012
+ console.log(` Confidence: ${delta.confidenceMean >= 0 ? '+' : ''}${delta.confidenceMean.toFixed(4)}`);
1013
+ console.log(` Accesses: ${sign(delta.totalAccess)}`);
1014
+ console.log('');
1015
+ }
1016
+
1017
+ if (trend) {
1018
+ console.log(` Trend (${trend.sessions} snapshots)`);
1019
+ console.log(` Node growth: ${trend.nodeGrowth >= 0 ? '+' : ''}${trend.nodeGrowth}`);
1020
+ console.log(` Edge growth: ${trend.edgeGrowth >= 0 ? '+' : ''}${trend.edgeGrowth}`);
1021
+ console.log(` Confidence drift: ${trend.confidenceDrift >= 0 ? '+' : ''}${trend.confidenceDrift.toFixed(4)}`);
1022
+ console.log(` Direction: ${trend.direction.toUpperCase()}`);
1023
+ console.log('');
1024
+ }
1025
+
1026
+ if (!delta && !trend) {
1027
+ console.log(' No history yet — run more sessions to see deltas and trends.');
1028
+ console.log('');
1029
+ }
1030
+
1031
+ console.log(bar);
1032
+ return report;
1033
+ }
1034
+
1035
+ module.exports = { init, getContext, recordEdit, feedback, consolidate, stats };
1036
+
1037
+ // ── CLI entrypoint ──────────────────────────────────────────────────────────
1038
+ if (require.main === module) {
1039
+ const cmd = process.argv[2];
1040
+ const jsonFlag = process.argv.includes('--json');
1041
+
1042
+ const cmds = {
1043
+ init: () => { const r = init(); console.log(JSON.stringify(r)); },
1044
+ stats: () => { stats(jsonFlag); },
1045
+ consolidate: () => { const r = consolidate(); console.log(JSON.stringify(r)); },
1046
+ };
1047
+
1048
+ if (cmd && cmds[cmd]) {
1049
+ cmds[cmd]();
1050
+ } else {
1051
+ console.log('Usage: intelligence.cjs <stats|init|consolidate> [--json]');
1052
+ console.log('');
1053
+ console.log(' stats Show intelligence diagnostics and trends');
1054
+ console.log(' stats --json Output as JSON for programmatic use');
1055
+ console.log(' init Build graph and rank entries');
1056
+ console.log(' consolidate Process pending insights and recompute');
1057
+ }
1058
+ }