claude-flow 3.10.45 → 3.10.46

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "claude-flow",
-  "version": "3.10.45",
+  "version": "3.10.46",
   "description": "Ruflo - Enterprise AI agent orchestration for Claude Code. Deploy 60+ specialized agents in coordinated swarms with self-learning, fault-tolerant consensus, vector memory, and MCP integration",
   "main": "dist/index.js",
   "type": "module",

package/v3/@claude-flow/cli/dist/src/commands/swarm.js

@@ -497,7 +497,11 @@ const startCommand = {
         catch (err) {
             spinner.fail('MCP swarm_init failed — swarm metadata saved locally only');
             output.writeln(output.dim(`  Error: ${err instanceof Error ? err.message : String(err)}`));
-            output.writeln(output.dim('  The MCP server may not be running. Start it with: claude mcp add claude-flow npx claude-flow@v3alpha mcp start'));
+            // #2370: the old hint referenced the deprecated `claude-flow@v3alpha`
+            // dist-tag which now resolves to a pre-rename package. Use the current
+            // `ruflo@latest` and force a fresh fetch with `-y` so npx doesn't pick
+            // a stale local install.
+            output.writeln(output.dim('  The MCP server may not be running. Start it with: claude mcp add claude-flow -- npx -y ruflo@latest mcp start'));
         }
         // Persist swarm state to disk so `swarm status` can read it
         const swarmDir = path.join(process.cwd(), '.swarm');

package/v3/@claude-flow/cli/dist/src/init/executor.js

@@ -751,7 +751,15 @@ function detectExistingRufloMCP(targetDir) {
             // 'claude-flow', a second `ruflo init` must still recognise the existing install.
             if (parsed.mcpServers && typeof parsed.mcpServers === 'object') {
                 const servers = parsed.mcpServers;
-                if ('claude-flow' in servers || 'ruflo' in servers)
+                // #2369: also recognise the legacy dist-tag keys generated by
+                // pre-rename installs (claude-flow ≤ 2.x). Without these the
+                // detection walks parent dirs, doesn't match, and writes a NEW
+                // claude-flow-keyed config — both servers then run under
+                // different prefixes producing duplicate-tool noise.
+                if ('claude-flow' in servers ||
+                    'ruflo' in servers ||
+                    'claude-flow@alpha' in servers ||
+                    'claude-flow@v3alpha' in servers)
                     return candidate;
             }
             // (b) #1840: Claude Code project-scoped registrations under
@@ -768,7 +776,11 @@ function detectExistingRufloMCP(targetDir) {
                     if (!projectMcp || typeof projectMcp !== 'object')
                         continue;
                     const mcp = projectMcp;
-                    if (!('claude-flow' in mcp) && !('ruflo' in mcp))
+                    // #2369: legacy dist-tag keys also count as already-registered.
+                    if (!('claude-flow' in mcp) &&
+                        !('ruflo' in mcp) &&
+                        !('claude-flow@alpha' in mcp) &&
+                        !('claude-flow@v3alpha' in mcp))
                         continue;
                     if (targetAncestors.has(normalizeProjectKey(projectKey))) {
                         return `${candidate} (projects[${projectKey}])`;
@@ -795,6 +807,26 @@ function normalizeProjectKey(p) {
 async function writeMCPConfig(targetDir, options, result) {
     const mcpPath = path.join(targetDir, '.mcp.json');
     if (fs.existsSync(mcpPath) && !options.force) {
+        // #2369: an existing .mcp.json from a pre-rename install is the most
+        // common cause of "autopilot tools missing after init" reports. Parse
+        // the existing file and surface a loud, specific message naming the
+        // stale key so users know to either delete the file or re-run with
+        // --force. Without this they get a silent skip and no warning.
+        try {
+            const parsed = JSON.parse(fs.readFileSync(mcpPath, 'utf-8'));
+            const servers = parsed?.mcpServers;
+            if (servers && typeof servers === 'object') {
+                const staleKeys = ['claude-flow@alpha', 'claude-flow@v3alpha'].filter(k => k in servers);
+                if (staleKeys.length > 0) {
+                    result.skipped.push(`.mcp.json (existing file uses deprecated key '${staleKeys[0]}' — autopilot/browser/wasm-agent tools will be missing; ` +
+                        `delete .mcp.json and re-run, or re-run with --force to overwrite)`);
+                    return;
+                }
+            }
+        }
+        catch {
+            // Existing file isn't valid JSON — fall through to the generic skip.
+        }
         result.skipped.push('.mcp.json');
         return;
     }

package/v3/@claude-flow/cli/dist/src/services/container-worker-pool.d.ts

@@ -161,7 +161,14 @@ export declare class ContainerWorkerPool extends EventEmitter {
      */
     private execInContainer;
     /**
-     * Build worker command for container execution
+     * Build worker command for container execution.
+     *
+     * #2371: the old command spawned `npx claude-flow@v3alpha daemon trigger`,
+     * which (a) referenced a deprecated dist-tag pointing at the pre-rename
+     * package, and (b) omitted `-y`, so npx could silently fall back to a
+     * locally-installed stale `claude-flow` without fetching the published
+     * version. Workers were running pre-autopilot / pre-browser builds.
+     * Use the current `ruflo@latest` and force a fresh resolution with `-y`.
      */
     private buildWorkerCommand;
     /**

package/v3/@claude-flow/cli/dist/src/services/container-worker-pool.js

@@ -444,12 +444,18 @@ export class ContainerWorkerPool extends EventEmitter {
         });
     }
     /**
-     * Build worker command for container execution
+     * Build worker command for container execution.
+     *
+     * #2371: the old command spawned `npx claude-flow@v3alpha daemon trigger`,
+     * which (a) referenced a deprecated dist-tag pointing at the pre-rename
+     * package, and (b) omitted `-y`, so npx could silently fall back to a
+     * locally-installed stale `claude-flow` without fetching the published
+     * version. Workers were running pre-autopilot / pre-browser builds.
+     * Use the current `ruflo@latest` and force a fresh resolution with `-y`.
      */
     buildWorkerCommand(options) {
-        // Use npx to run claude-flow daemon trigger
         return [
-            'npx', 'claude-flow@v3alpha',
+            'npx', '-y', 'ruflo@latest',
             'daemon', 'trigger',
             '-w', options.workerType,
             '--headless',

package/v3/@claude-flow/cli/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@claude-flow/cli",
-  "version": "3.10.45",
+  "version": "3.10.46",
   "type": "module",
   "description": "Ruflo CLI - Enterprise AI agent orchestration with 60+ specialized agents, swarm coordination, MCP server, self-learning hooks, and vector memory for Claude Code",
   "main": "dist/src/index.js",