claude-code-workflow 6.3.25 → 6.3.26

package/.claude/commands/issue/discover-by-prompt.md

@@ -0,0 +1,764 @@
+---
+name: issue:discover-by-prompt
+description: Discover issues from user prompt with Gemini-planned iterative multi-agent exploration. Uses ACE semantic search for context gathering and supports cross-module comparison (e.g., frontend vs backend API contracts).
+argument-hint: "<prompt> [--scope=src/**] [--depth=standard|deep] [--max-iterations=5]"
+allowed-tools: SlashCommand(*), TodoWrite(*), Read(*), Bash(*), Task(*), AskUserQuestion(*), Glob(*), Grep(*), mcp__ace-tool__search_context(*), mcp__exa__search(*)
+---
+
+# Issue Discovery by Prompt
+
+## Quick Start
+
+```bash
+# Discover issues based on user description
+/issue:discover-by-prompt "Check if frontend API calls match backend implementations"
+
+# Compare specific modules
+/issue:discover-by-prompt "Verify auth flow consistency between mobile and web clients" --scope=src/auth/**,src/mobile/**
+
+# Deep exploration with more iterations
+/issue:discover-by-prompt "Find all places where error handling is inconsistent" --depth=deep --max-iterations=8
+
+# Focused backend-frontend contract check
+/issue:discover-by-prompt "Compare REST API definitions with frontend fetch calls"
+```
+
+**Core Difference from `/issue:discover`**:
+- `discover`: Pre-defined perspectives (bug, security, etc.), parallel execution
+- `discover-by-prompt`: User-driven prompt, Gemini-planned strategy, iterative exploration
+
+## What & Why
+
+### Core Concept
+
+Prompt-driven issue discovery with intelligent planning. Instead of fixed perspectives, this command:
+
+1. **Analyzes user intent** via Gemini to understand what to find
+2. **Plans exploration strategy** dynamically based on codebase structure
+3. **Executes iterative multi-agent exploration** with feedback loops
+4. **Performs cross-module comparison** when detecting comparison intent
+
+### Value Proposition
+
+1. **Natural Language Input**: Describe what you want to find, not how to find it
+2. **Intelligent Planning**: Gemini designs optimal exploration strategy
+3. **Iterative Refinement**: Each round builds on previous discoveries
+4. **Cross-Module Analysis**: Compare frontend/backend, mobile/web, old/new implementations
+5. **Adaptive Exploration**: Adjusts direction based on findings
+
+### Use Cases
+
+| Scenario | Example Prompt |
+|----------|----------------|
+| API Contract | "Check if frontend calls match backend endpoints" |
+| Error Handling | "Find inconsistent error handling patterns" |
+| Migration Gap | "Compare old auth with new auth implementation" |
+| Feature Parity | "Verify mobile has all web features" |
+| Schema Drift | "Check if TypeScript types match API responses" |
+| Integration | "Find mismatches between service A and service B" |
+
+## How It Works
+
+### Execution Flow
+
+```
+Phase 1: Prompt Analysis & Initialization
+   ├─ Parse user prompt and flags
+   ├─ Detect exploration intent (comparison/search/verification)
+   └─ Initialize discovery session
+
+Phase 1.5: ACE Context Gathering
+   ├─ Use ACE semantic search to understand codebase structure
+   ├─ Identify relevant modules based on prompt keywords
+   ├─ Collect architecture context for Gemini planning
+   └─ Build initial context package
+
+Phase 2: Gemini Strategy Planning
+   ├─ Feed ACE context + prompt to Gemini CLI
+   ├─ Gemini analyzes and generates exploration strategy
+   ├─ Create exploration dimensions with search targets
+   ├─ Define comparison matrix (if comparison intent)
+   └─ Set success criteria and iteration limits
+
+Phase 3: Iterative Agent Exploration (with ACE)
+   ├─ Iteration 1: Initial exploration by assigned agents
+   │   ├─ Agent A: ACE search + explore dimension 1
+   │   ├─ Agent B: ACE search + explore dimension 2
+   │   └─ Collect findings, update shared context
+   ├─ Iteration 2-N: Refined exploration
+   │   ├─ Analyze previous findings
+   │   ├─ ACE search for related code paths
+   │   ├─ Execute targeted exploration
+   │   └─ Update cumulative findings
+   └─ Termination: Max iterations or convergence
+
+Phase 4: Cross-Analysis & Synthesis
+   ├─ Compare findings across dimensions
+   ├─ Identify discrepancies and issues
+   ├─ Calculate confidence scores
+   └─ Generate issue candidates
+
+Phase 5: Issue Generation & Summary
+   ├─ Convert findings to issue format
+   ├─ Write discovery outputs
+   └─ Prompt user for next action
+```
+
+### Exploration Dimensions
+
+Dimensions are **dynamically generated by Gemini** based on the user prompt. Not limited to predefined categories.
+
+**Examples**:
+
+| Prompt | Generated Dimensions |
+|--------|---------------------|
+| "Check API contracts" | frontend-calls, backend-handlers |
+| "Find auth issues" | auth-module (single dimension) |
+| "Compare old/new implementations" | legacy-code, new-code |
+| "Audit payment flow" | payment-service, validation, logging |
+| "Find error handling gaps" | error-handlers, error-types, recovery-logic |
+
+Gemini analyzes the prompt + ACE context to determine:
+- How many dimensions are needed (1 to N)
+- What each dimension should focus on
+- Whether comparison is needed between dimensions
+
+### Iteration Strategy
+
+```
+┌─────────────────────────────────────────────────────────────┐
+│                    Iteration Loop                           │
+├─────────────────────────────────────────────────────────────┤
+│  1. Plan: What to explore this iteration                    │
+│     └─ Based on: previous findings + unexplored areas       │
+│                                                             │
+│  2. Execute: Launch agents for this iteration               │
+│     └─ Each agent: explore → collect → return summary       │
+│                                                             │
+│  3. Analyze: Process iteration results                      │
+│     └─ New findings? Gaps? Contradictions?                  │
+│                                                             │
+│  4. Decide: Continue or terminate                           │
+│     └─ Terminate if: max iterations OR convergence OR       │
+│                      high confidence on all questions       │
+└─────────────────────────────────────────────────────────────┘
+```
+
+## Core Responsibilities
+
+### Phase 1: Prompt Analysis & Initialization
+
+```javascript
+// Step 1: Parse arguments
+const { prompt, scope, depth, maxIterations } = parseArgs(args);
+
+// Step 2: Generate discovery ID
+const discoveryId = `DBP-${formatDate(new Date(), 'YYYYMMDD-HHmmss')}`;
+
+// Step 3: Create output directory
+const outputDir = `.workflow/issues/discoveries/${discoveryId}`;
+await mkdir(outputDir, { recursive: true });
+await mkdir(`${outputDir}/iterations`, { recursive: true });
+
+// Step 4: Detect intent type from prompt
+const intentType = detectIntent(prompt);
+// Returns: 'comparison' | 'search' | 'verification' | 'audit'
+
+// Step 5: Initialize discovery state
+await writeJson(`${outputDir}/discovery-state.json`, {
+  discovery_id: discoveryId,
+  type: 'prompt-driven',
+  prompt: prompt,
+  intent_type: intentType,
+  scope: scope || '**/*',
+  depth: depth || 'standard',
+  max_iterations: maxIterations || 5,
+  phase: 'initialization',
+  created_at: new Date().toISOString(),
+  iterations: [],
+  cumulative_findings: [],
+  comparison_matrix: null  // filled for comparison intent
+});
+```
+
+### Phase 1.5: ACE Context Gathering
+
+**Purpose**: Use ACE semantic search to gather codebase context before Gemini planning.
+
+```javascript
+// Step 1: Extract keywords from prompt for semantic search
+const keywords = extractKeywords(prompt);
+// e.g., "frontend API calls match backend" → ["frontend", "API", "backend", "endpoints"]
+
+// Step 2: Use ACE to understand codebase structure
+const aceQueries = [
+  `Project architecture and module structure for ${keywords.join(', ')}`,
+  `Where are ${keywords[0]} implementations located?`,
+  `How does ${keywords.slice(0, 2).join(' ')} work in this codebase?`
+];
+
+const aceResults = [];
+for (const query of aceQueries) {
+  const result = await mcp__ace-tool__search_context({
+    project_root_path: process.cwd(),
+    query: query
+  });
+  aceResults.push({ query, result });
+}
+
+// Step 3: Build context package for Gemini (kept in memory)
+const aceContext = {
+  prompt_keywords: keywords,
+  codebase_structure: aceResults[0].result,
+  relevant_modules: aceResults.slice(1).map(r => r.result),
+  detected_patterns: extractPatterns(aceResults)
+};
+
+// Step 4: Update state (no separate file)
+await updateDiscoveryState(outputDir, {
+  phase: 'context-gathered',
+  ace_context: {
+    queries_executed: aceQueries.length,
+    modules_identified: aceContext.relevant_modules.length
+  }
+});
+
+// aceContext passed to Phase 2 in memory
+```
+
+**ACE Query Strategy by Intent Type**:
+
+| Intent | ACE Queries |
+|--------|-------------|
+| **comparison** | "frontend API calls", "backend API handlers", "API contract definitions" |
+| **search** | "{keyword} implementations", "{keyword} usage patterns" |
+| **verification** | "expected behavior for {feature}", "test coverage for {feature}" |
+| **audit** | "all {category} patterns", "{category} security concerns" |
+
+### Phase 2: Gemini Strategy Planning
+
+**Purpose**: Gemini analyzes user prompt + ACE context to design optimal exploration strategy.
+
+```javascript
+// Step 1: Load ACE context gathered in Phase 1.5
+const aceContext = await readJson(`${outputDir}/ace-context.json`);
+
+// Step 2: Build Gemini planning prompt with ACE context
+const planningPrompt = `
+PURPOSE: Analyze discovery prompt and create exploration strategy based on codebase context
+TASK:
+• Parse user intent from prompt: "${prompt}"
+• Use codebase context to identify specific modules and files to explore
+• Create exploration dimensions with precise search targets
+• Define comparison matrix structure (if comparison intent)
+• Set success criteria and iteration strategy
+MODE: analysis
+CONTEXT: @${scope || '**/*'} | Discovery type: ${intentType}
+
+## Codebase Context (from ACE semantic search)
+${JSON.stringify(aceContext, null, 2)}
+
+EXPECTED: JSON exploration plan following exploration-plan-schema.json:
+{
+  "intent_analysis": { "type": "${intentType}", "primary_question": "...", "sub_questions": [...] },
+  "dimensions": [{ "name": "...", "description": "...", "search_targets": [...], "focus_areas": [...], "agent_prompt": "..." }],
+  "comparison_matrix": { "dimension_a": "...", "dimension_b": "...", "comparison_points": [...] },
+  "success_criteria": [...],
+  "estimated_iterations": N,
+  "termination_conditions": [...]
+}
+RULES: $(cat ~/.claude/workflows/cli-templates/protocols/analysis-protocol.md) | Use ACE context to inform targets | Focus on actionable plan
+`;
+
+// Step 3: Execute Gemini planning
+Bash({
+  command: `ccw cli -p "${planningPrompt}" --tool gemini --mode analysis`,
+  run_in_background: true,
+  timeout: 300000
+});
+
+// Step 4: Parse Gemini output and validate against schema
+const explorationPlan = await parseGeminiPlanOutput(geminiResult);
+validateAgainstSchema(explorationPlan, 'exploration-plan-schema.json');
+
+// Step 5: Enhance plan with ACE-discovered file paths
+explorationPlan.dimensions = explorationPlan.dimensions.map(dim => ({
+  ...dim,
+  ace_suggested_files: aceContext.relevant_modules
+    .filter(m => m.relevance_to === dim.name)
+    .map(m => m.file_path)
+}));
+
+// Step 6: Update state (plan kept in memory, not persisted)
+await updateDiscoveryState(outputDir, {
+  phase: 'planned',
+  exploration_plan: {
+    dimensions_count: explorationPlan.dimensions.length,
+    has_comparison_matrix: !!explorationPlan.comparison_matrix,
+    estimated_iterations: explorationPlan.estimated_iterations
+  }
+});
+
+// explorationPlan passed to Phase 3 in memory
+```
+
+**Gemini Planning Responsibilities**:
+
+| Responsibility | Input | Output |
+|----------------|-------|--------|
+| Intent Analysis | User prompt | type, primary_question, sub_questions |
+| Dimension Design | ACE context + prompt | dimensions with search_targets |
+| Comparison Matrix | Intent type + modules | comparison_points (if applicable) |
+| Iteration Strategy | Depth setting | estimated_iterations, termination_conditions |
+
+**Gemini Planning Output Schema**:
+
+```json
+{
+  "intent_analysis": {
+    "type": "comparison|search|verification|audit",
+    "primary_question": "string",
+    "sub_questions": ["string"]
+  },
+  "dimensions": [
+    {
+      "name": "frontend",
+      "description": "Client-side API calls and error handling",
+      "search_targets": ["src/api/**", "src/hooks/**"],
+      "focus_areas": ["fetch calls", "error boundaries", "response parsing"],
+      "agent_prompt": "Explore frontend API consumption patterns..."
+    },
+    {
+      "name": "backend",
+      "description": "Server-side API implementations",
+      "search_targets": ["src/server/**", "src/routes/**"],
+      "focus_areas": ["endpoint handlers", "response schemas", "error responses"],
+      "agent_prompt": "Explore backend API implementations..."
+    }
+  ],
+  "comparison_matrix": {
+    "dimension_a": "frontend",
+    "dimension_b": "backend",
+    "comparison_points": [
+      {"aspect": "endpoints", "frontend_check": "fetch URLs", "backend_check": "route paths"},
+      {"aspect": "methods", "frontend_check": "HTTP methods used", "backend_check": "methods accepted"},
+      {"aspect": "payloads", "frontend_check": "request body structure", "backend_check": "expected schema"},
+      {"aspect": "responses", "frontend_check": "response parsing", "backend_check": "response format"},
+      {"aspect": "errors", "frontend_check": "error handling", "backend_check": "error responses"}
+    ]
+  },
+  "success_criteria": [
+    "All API endpoints mapped between frontend and backend",
+    "Discrepancies identified with file:line references",
+    "Each finding includes remediation suggestion"
+  ],
+  "estimated_iterations": 3,
+  "termination_conditions": [
+    "All comparison points verified",
+    "No new findings in last iteration",
+    "Confidence > 0.8 on primary question"
+  ]
+}
+```
+
+### Phase 3: Iterative Agent Exploration (with ACE)
+
+**Purpose**: Multi-agent iterative exploration using ACE for semantic search within each iteration.
+
+```javascript
+let iteration = 0;
+let cumulativeFindings = [];
+let sharedContext = { aceDiscoveries: [], crossReferences: [] };
+let shouldContinue = true;
+
+while (shouldContinue && iteration < maxIterations) {
+  iteration++;
+  const iterationDir = `${outputDir}/iterations/${iteration}`;
+  await mkdir(iterationDir, { recursive: true });
+
+  // Step 1: ACE-assisted iteration planning
+  // Use previous findings to guide ACE queries for this iteration
+  const iterationAceQueries = iteration === 1
+    ? explorationPlan.dimensions.map(d => d.focus_areas[0])  // Initial queries from plan
+    : deriveQueriesFromFindings(cumulativeFindings);         // Follow-up queries from findings
+
+  // Execute ACE searches to find related code
+  const iterationAceResults = [];
+  for (const query of iterationAceQueries) {
+    const result = await mcp__ace-tool__search_context({
+      project_root_path: process.cwd(),
+      query: `${query} in ${explorationPlan.scope}`
+    });
+    iterationAceResults.push({ query, result });
+  }
+
+  // Update shared context with ACE discoveries
+  sharedContext.aceDiscoveries.push(...iterationAceResults);
+
+  // Step 2: Plan this iteration based on ACE results
+  const iterationPlan = planIteration(iteration, explorationPlan, cumulativeFindings, iterationAceResults);
+
+  // Step 3: Launch dimension agents with ACE context
+  const agentPromises = iterationPlan.dimensions.map(dimension =>
+    Task({
+      subagent_type: "cli-explore-agent",
+      run_in_background: false,
+      description: `Explore ${dimension.name} (iteration ${iteration})`,
+      prompt: buildDimensionPromptWithACE(dimension, iteration, cumulativeFindings, iterationAceResults, iterationDir)
+    })
+  );
+
+  // Wait for iteration agents
+  const iterationResults = await Promise.all(agentPromises);
+
+  // Step 4: Collect and analyze iteration findings
+  const iterationFindings = await collectIterationFindings(iterationDir, iterationPlan.dimensions);
+
+  // Step 5: Cross-reference findings between dimensions
+  if (iterationPlan.dimensions.length > 1) {
+    const crossRefs = findCrossReferences(iterationFindings, iterationPlan.dimensions);
+    sharedContext.crossReferences.push(...crossRefs);
+  }
+
+  cumulativeFindings.push(...iterationFindings);
+
+  // Step 6: Decide whether to continue
+  const convergenceCheck = checkConvergence(iterationFindings, cumulativeFindings, explorationPlan);
+  shouldContinue = !convergenceCheck.converged;
+
+  // Step 7: Update state (iteration summary embedded in state)
+  await updateDiscoveryState(outputDir, {
+    iterations: [...state.iterations, {
+      number: iteration,
+      findings_count: iterationFindings.length,
+      ace_queries: iterationAceQueries.length,
+      cross_references: sharedContext.crossReferences.length,
+      new_discoveries: convergenceCheck.newDiscoveries,
+      confidence: convergenceCheck.confidence,
+      continued: shouldContinue
+    }],
+    cumulative_findings: cumulativeFindings
+  });
+}
+```
+
+**ACE in Iteration Loop**:
+
+```
+Iteration N
+    │
+    ├─→ ACE Search (based on previous findings)
+    │   └─ Query: "related code paths for {finding.category}"
+    │   └─ Result: Additional files to explore
+    │
+    ├─→ Agent Exploration (with ACE context)
+    │   └─ Agent receives: dimension targets + ACE suggestions
+    │   └─ Agent can call ACE for deeper search
+    │
+    ├─→ Cross-Reference Analysis
+    │   └─ Compare findings between dimensions
+    │   └─ Identify discrepancies
+    │
+    └─→ Convergence Check
+        └─ New findings? Continue
+        └─ No new findings? Terminate
+```
+
+**Dimension Agent Prompt Template (with ACE)**:
+
+```javascript
+function buildDimensionPromptWithACE(dimension, iteration, previousFindings, aceResults, outputDir) {
+  // Filter ACE results relevant to this dimension
+  const relevantAceResults = aceResults.filter(r =>
+    r.query.includes(dimension.name) || dimension.focus_areas.some(fa => r.query.includes(fa))
+  );
+
+  return `
+    ## Task Objective
+    Explore ${dimension.name} dimension for issue discovery (Iteration ${iteration})
+
+    ## Context
+    - Dimension: ${dimension.name}
+    - Description: ${dimension.description}
+    - Search Targets: ${dimension.search_targets.join(', ')}
+    - Focus Areas: ${dimension.focus_areas.join(', ')}
+
+    ## ACE Semantic Search Results (Pre-gathered)
+    The following files/code sections were identified by ACE as relevant to this dimension:
+    ${JSON.stringify(relevantAceResults.map(r => ({ query: r.query, files: r.result.slice(0, 5) })), null, 2)}
+
+    **Use ACE for deeper exploration**: You have access to mcp__ace-tool__search_context.
+    When you find something interesting, use ACE to find related code:
+    - mcp__ace-tool__search_context({ project_root_path: ".", query: "related to {finding}" })
+
+    ${iteration > 1 ? `
+    ## Previous Findings to Build Upon
+    ${summarizePreviousFindings(previousFindings, dimension.name)}
+
+    ## This Iteration Focus
+    - Explore areas not yet covered (check ACE results for new files)
+    - Verify/deepen previous findings
+    - Follow leads from previous discoveries
+    - Use ACE to find cross-references between dimensions
+    ` : ''}
+
+    ## MANDATORY FIRST STEPS
+    1. Read exploration plan: ${outputDir}/../exploration-plan.json
+    2. Read schema: ~/.claude/workflows/cli-templates/schemas/discovery-finding-schema.json
+    3. Review ACE results above for starting points
+    4. Explore files identified by ACE
+
+    ## Exploration Instructions
+    ${dimension.agent_prompt}
+
+    ## ACE Usage Guidelines
+    - Use ACE when you need to find:
+      - Where a function/class is used
+      - Related implementations in other modules
+      - Cross-module dependencies
+      - Similar patterns elsewhere in codebase
+    - Query format: Natural language, be specific
+    - Example: "Where is UserService.authenticate called from?"
+
+    ## Output Requirements
+
+    **1. Write JSON file**: ${outputDir}/${dimension.name}.json
+    Follow discovery-finding-schema.json:
+    - findings: [{id, title, category, description, file, line, snippet, confidence, related_dimension}]
+    - coverage: {files_explored, areas_covered, areas_remaining}
+    - leads: [{description, suggested_search}] // for next iteration
+    - ace_queries_used: [{query, result_count}] // track ACE usage
+
+    **2. Return summary**:
+    - Total findings this iteration
+    - Key discoveries
+    - ACE queries that revealed important code
+    - Recommended next exploration areas
+
+    ## Success Criteria
+    - [ ] JSON written to ${outputDir}/${dimension.name}.json
+    - [ ] Each finding has file:line reference
+    - [ ] ACE used for cross-references where applicable
+    - [ ] Coverage report included
+    - [ ] Leads for next iteration identified
+  `;
+}
+```
+
+### Phase 4: Cross-Analysis & Synthesis
+
+```javascript
+// For comparison intent, perform cross-analysis
+if (intentType === 'comparison' && explorationPlan.comparison_matrix) {
+  const comparisonResults = [];
+
+  for (const point of explorationPlan.comparison_matrix.comparison_points) {
+    const dimensionAFindings = cumulativeFindings.filter(f =>
+      f.related_dimension === explorationPlan.comparison_matrix.dimension_a &&
+      f.category.includes(point.aspect)
+    );
+
+    const dimensionBFindings = cumulativeFindings.filter(f =>
+      f.related_dimension === explorationPlan.comparison_matrix.dimension_b &&
+      f.category.includes(point.aspect)
+    );
+
+    // Compare and find discrepancies
+    const discrepancies = findDiscrepancies(dimensionAFindings, dimensionBFindings, point);
+
+    comparisonResults.push({
+      aspect: point.aspect,
+      dimension_a_count: dimensionAFindings.length,
+      dimension_b_count: dimensionBFindings.length,
+      discrepancies: discrepancies,
+      match_rate: calculateMatchRate(dimensionAFindings, dimensionBFindings)
+    });
+  }
+
+  // Write comparison analysis
+  await writeJson(`${outputDir}/comparison-analysis.json`, {
+    matrix: explorationPlan.comparison_matrix,
+    results: comparisonResults,
+    summary: {
+      total_discrepancies: comparisonResults.reduce((sum, r) => sum + r.discrepancies.length, 0),
+      overall_match_rate: average(comparisonResults.map(r => r.match_rate)),
+      critical_mismatches: comparisonResults.filter(r => r.match_rate < 0.5)
+    }
+  });
+}
+
+// Prioritize all findings
+const prioritizedFindings = prioritizeFindings(cumulativeFindings, explorationPlan);
+```
+
+### Phase 5: Issue Generation & Summary
+
+```javascript
+// Convert high-confidence findings to issues
+const issueWorthy = prioritizedFindings.filter(f =>
+  f.confidence >= 0.7 || f.priority === 'critical' || f.priority === 'high'
+);
+
+const issues = issueWorthy.map(finding => ({
+  id: `ISS-${discoveryId}-${finding.id}`,
+  title: finding.title,
+  description: finding.description,
+  source: {
+    discovery_id: discoveryId,
+    finding_id: finding.id,
+    dimension: finding.related_dimension
+  },
+  file: finding.file,
+  line: finding.line,
+  priority: finding.priority,
+  category: finding.category,
+  suggested_fix: finding.suggested_fix,
+  confidence: finding.confidence,
+  status: 'discovered',
+  created_at: new Date().toISOString()
+}));
+
+// Write issues
+await writeJsonl(`${outputDir}/discovery-issues.jsonl`, issues);
+
+// Update final state (summary embedded in state, no separate file)
+await updateDiscoveryState(outputDir, {
+  phase: 'complete',
+  updated_at: new Date().toISOString(),
+  results: {
+    total_iterations: iteration,
+    total_findings: cumulativeFindings.length,
+    issues_generated: issues.length,
+    comparison_match_rate: comparisonResults
+      ? average(comparisonResults.map(r => r.match_rate))
+      : null
+  }
+});
+
+// Prompt user for next action
+await AskUserQuestion({
+  questions: [{
+    question: `Discovery complete: ${issues.length} issues from ${cumulativeFindings.length} findings across ${iteration} iterations. What next?`,
+    header: "Next Step",
+    multiSelect: false,
+    options: [
+      { label: "Export to Issues (Recommended)", description: `Export ${issues.length} issues for planning` },
+      { label: "Review Details", description: "View comparison analysis and iteration details" },
+      { label: "Run Deeper", description: "Continue with more iterations" },
+      { label: "Skip", description: "Complete without exporting" }
+    ]
+  }]
+});
+```
+
+## Output File Structure
+
+```
+.workflow/issues/discoveries/
+└── {DBP-YYYYMMDD-HHmmss}/
+    ├── discovery-state.json          # Session state with iteration tracking
+    ├── iterations/
+    │   ├── 1/
+    │   │   └── {dimension}.json      # Dimension findings
+    │   ├── 2/
+    │   │   └── {dimension}.json
+    │   └── ...
+    ├── comparison-analysis.json      # Cross-dimension comparison (if applicable)
+    └── discovery-issues.jsonl        # Generated issue candidates
+```
+
+**Simplified Design**:
+- ACE context and Gemini plan kept in memory, not persisted
+- Iteration summaries embedded in state
+- No separate summary.md (state.json contains all needed info)
+
+## Schema References
+
+| Schema | Path | Used By |
+|--------|------|---------|
+| **Discovery State** | `discovery-state-schema.json` | Orchestrator (state tracking) |
+| **Discovery Finding** | `discovery-finding-schema.json` | Dimension agents (output) |
+| **Exploration Plan** | `exploration-plan-schema.json` | Gemini output validation (memory only) |
+
+## Configuration Options
+
+| Flag | Default | Description |
+|------|---------|-------------|
+| `--scope` | `**/*` | File pattern to explore |
+| `--depth` | `standard` | `standard` (3 iterations) or `deep` (5+ iterations) |
+| `--max-iterations` | 5 | Maximum exploration iterations |
+| `--tool` | `gemini` | Planning tool (gemini/qwen) |
+| `--plan-only` | `false` | Stop after Phase 2 (Gemini planning), show plan for user review |
+
+## Examples
+
+### Example 1: Single Module Deep Dive
+
+```bash
+/issue:discover-by-prompt "Find all potential issues in the auth module" --scope=src/auth/**
+```
+
+**Gemini plans** (single dimension):
+- Dimension: auth-module
+- Focus: security vulnerabilities, edge cases, error handling, test gaps
+
+**Iterations**: 2-3 (until no new findings)
+
+### Example 2: API Contract Comparison
+
+```bash
+/issue:discover-by-prompt "Check if API calls match implementations" --scope=src/**
+```
+
+**Gemini plans** (comparison):
+- Dimension 1: api-consumers (fetch calls, hooks, services)
+- Dimension 2: api-providers (handlers, routes, controllers)
+- Comparison matrix: endpoints, methods, payloads, responses
+
+### Example 3: Multi-Module Audit
+
+```bash
+/issue:discover-by-prompt "Audit the payment flow for issues" --scope=src/payment/**
+```
+
+**Gemini plans** (multi-dimension):
+- Dimension 1: payment-logic (calculations, state transitions)
+- Dimension 2: validation (input checks, business rules)
+- Dimension 3: error-handling (failure modes, recovery)
+
+### Example 4: Plan Only Mode
+
+```bash
+/issue:discover-by-prompt "Find inconsistent patterns" --plan-only
+```
+
+Stops after Gemini planning, outputs:
+```
+Gemini Plan:
+- Intent: search
+- Dimensions: 2 (pattern-definitions, pattern-usages)
+- Estimated iterations: 3
+
+Continue with exploration? [Y/n]
+```
+
+## Related Commands
+
+```bash
+# After discovery, plan solutions
+/issue:plan DBP-001-01,DBP-001-02
+
+# View all discoveries
+/issue:manage
+
+# Standard perspective-based discovery
+/issue:discover src/auth/** --perspectives=security,bug
+```
+
+## Best Practices
+
+1. **Be Specific in Prompts**: More specific prompts lead to better Gemini planning
+2. **Scope Appropriately**: Narrow scope for focused comparison, wider for audits
+3. **Review Exploration Plan**: Check `exploration-plan.json` before long explorations
+4. **Use Standard Depth First**: Start with standard, go deep only if needed
+5. **Combine with `/issue:discover`**: Use prompt-based for comparisons, perspective-based for audits