claude-code-orchestrator-kit 1.4.1 → 1.4.16

package/.claude/skills/senior-prompt-engineer/scripts/rag_evaluator.py

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+#!/usr/bin/env python3
+"""
+Rag Evaluator
+Production-grade tool for senior prompt engineer
+"""
+
+import os
+import sys
+import json
+import logging
+import argparse
+from pathlib import Path
+from typing import Dict, List, Optional
+from datetime import datetime
+
+logging.basicConfig(
+    level=logging.INFO,
+    format='%(asctime)s - %(levelname)s - %(message)s'
+)
+logger = logging.getLogger(__name__)
+
+class RagEvaluator:
+    """Production-grade rag evaluator"""
+    
+    def __init__(self, config: Dict):
+        self.config = config
+        self.results = {
+            'status': 'initialized',
+            'start_time': datetime.now().isoformat(),
+            'processed_items': 0
+        }
+        logger.info(f"Initialized {self.__class__.__name__}")
+    
+    def validate_config(self) -> bool:
+        """Validate configuration"""
+        logger.info("Validating configuration...")
+        # Add validation logic
+        logger.info("Configuration validated")
+        return True
+    
+    def process(self) -> Dict:
+        """Main processing logic"""
+        logger.info("Starting processing...")
+        
+        try:
+            self.validate_config()
+            
+            # Main processing
+            result = self._execute()
+            
+            self.results['status'] = 'completed'
+            self.results['end_time'] = datetime.now().isoformat()
+            
+            logger.info("Processing completed successfully")
+            return self.results
+            
+        except Exception as e:
+            self.results['status'] = 'failed'
+            self.results['error'] = str(e)
+            logger.error(f"Processing failed: {e}")
+            raise
+    
+    def _execute(self) -> Dict:
+        """Execute main logic"""
+        # Implementation here
+        return {'success': True}
+
+def main():
+    """Main entry point"""
+    parser = argparse.ArgumentParser(
+        description="Rag Evaluator"
+    )
+    parser.add_argument('--input', '-i', required=True, help='Input path')
+    parser.add_argument('--output', '-o', required=True, help='Output path')
+    parser.add_argument('--config', '-c', help='Configuration file')
+    parser.add_argument('--verbose', '-v', action='store_true', help='Verbose output')
+    
+    args = parser.parse_args()
+    
+    if args.verbose:
+        logging.getLogger().setLevel(logging.DEBUG)
+    
+    try:
+        config = {
+            'input': args.input,
+            'output': args.output
+        }
+        
+        processor = RagEvaluator(config)
+        results = processor.process()
+        
+        print(json.dumps(results, indent=2))
+        sys.exit(0)
+        
+    except Exception as e:
+        logger.error(f"Fatal error: {e}")
+        sys.exit(1)
+
+if __name__ == '__main__':
+    main()

package/.claude/skills/setup-knip/SKILL.md

@@ -0,0 +1,372 @@
+---
+name: setup-knip
+description: Install and configure Knip for dead code detection. Use before running dead-code-hunter or dependency-auditor to ensure Knip is available. Handles installation, configuration creation, and validation.
+allowed-tools: Bash, Read, Write, Glob
+---
+
+# Setup Knip
+
+Install and configure Knip - the tool for finding unused files, dependencies, and exports in JavaScript/TypeScript projects.
+
+## When to Use
+
+- Before running dead-code-hunter agent
+- Before running dependency-auditor agent
+- When project doesn't have Knip configured
+- When upgrading Knip configuration
+- In pre-flight validation of health workflows
+
+## Instructions
+
+### Step 1: Check if Knip is Installed
+
+Check package.json for knip in devDependencies.
+
+**Tools Used**: Read
+
+```bash
+# Read package.json and check for knip
+```
+
+**Check Logic**:
+- If `devDependencies.knip` exists → Knip is installed
+- If not found → Need to install
+
+### Step 2: Install Knip if Missing
+
+If Knip is not installed, add it as devDependency.
+
+**Tools Used**: Bash
+
+```bash
+# Detect package manager
+if [ -f "pnpm-lock.yaml" ]; then
+  pnpm add -D knip
+elif [ -f "yarn.lock" ]; then
+  yarn add -D knip
+elif [ -f "bun.lockb" ]; then
+  bun add -D knip
+else
+  npm install -D knip
+fi
+```
+
+**Expected Output**:
+```
++ knip@5.x.x
+```
+
+### Step 3: Check for Knip Configuration
+
+Look for existing Knip configuration files.
+
+**Tools Used**: Glob
+
+**Configuration Files** (in priority order):
+1. `knip.json`
+2. `knip.jsonc`
+3. `knip.ts`
+4. `knip.config.ts`
+5. `knip.config.js`
+6. `package.json` (knip field)
+
+### Step 4: Create Default Configuration if Missing
+
+If no configuration found, create `knip.json` with sensible defaults.
+
+**Tools Used**: Write
+
+**Default Configuration for Standard Project**:
+```json
+{
+  "$schema": "https://unpkg.com/knip@5/schema.json",
+  "entry": ["src/index.{ts,tsx,js,jsx}", "src/main.{ts,tsx,js,jsx}"],
+  "project": ["src/**/*.{ts,tsx,js,jsx}"],
+  "ignore": [
+    "**/*.d.ts",
+    "**/*.test.{ts,tsx}",
+    "**/*.spec.{ts,tsx}",
+    "**/test/**",
+    "**/tests/**",
+    "**/__tests__/**",
+    "**/node_modules/**"
+  ],
+  "ignoreDependencies": [
+    "@types/*"
+  ]
+}
+```
+
+**Default Configuration for Next.js Project** (detected by next in dependencies):
+```json
+{
+  "$schema": "https://unpkg.com/knip@5/schema.json",
+  "entry": [
+    "src/app/**/*.{ts,tsx}",
+    "src/pages/**/*.{ts,tsx}",
+    "app/**/*.{ts,tsx}",
+    "pages/**/*.{ts,tsx}"
+  ],
+  "project": ["src/**/*.{ts,tsx}", "app/**/*.{ts,tsx}", "pages/**/*.{ts,tsx}"],
+  "ignore": [
+    "**/*.d.ts",
+    "**/*.test.{ts,tsx}",
+    "**/*.spec.{ts,tsx}",
+    "**/node_modules/**"
+  ],
+  "next": {
+    "entry": [
+      "next.config.{js,ts,mjs}",
+      "middleware.{js,ts}"
+    ]
+  }
+}
+```
+
+**Default Configuration for Monorepo** (detected by workspaces in package.json):
+```json
+{
+  "$schema": "https://unpkg.com/knip@5/schema.json",
+  "workspaces": {
+    "packages/*": {
+      "entry": ["src/index.{ts,tsx,js,jsx}"],
+      "project": ["src/**/*.{ts,tsx,js,jsx}"]
+    },
+    "apps/*": {
+      "entry": ["src/index.{ts,tsx,js,jsx}", "src/main.{ts,tsx,js,jsx}"],
+      "project": ["src/**/*.{ts,tsx,js,jsx}"]
+    }
+  },
+  "ignore": [
+    "**/*.d.ts",
+    "**/*.test.{ts,tsx}",
+    "**/*.spec.{ts,tsx}",
+    "**/node_modules/**"
+  ]
+}
+```
+
+### Step 5: Add npm Scripts if Missing
+
+Check if package.json has knip scripts, add if missing.
+
+**Tools Used**: Read, Bash
+
+**Scripts to Add**:
+```json
+{
+  "scripts": {
+    "knip": "knip",
+    "knip:fix": "knip --fix",
+    "knip:deps": "knip --dependencies",
+    "knip:exports": "knip --exports",
+    "knip:files": "knip --files"
+  }
+}
+```
+
+**Add via npm pkg**:
+```bash
+npm pkg set scripts.knip="knip"
+npm pkg set scripts.knip:fix="knip --fix"
+npm pkg set scripts.knip:deps="knip --dependencies"
+npm pkg set scripts.knip:exports="knip --exports"
+npm pkg set scripts.knip:files="knip --files"
+```
+
+### Step 6: Validate Installation
+
+Run Knip to verify installation works.
+
+**Tools Used**: Bash
+
+```bash
+npx knip --help
+```
+
+**Expected**: Help output displayed without errors
+
+### Step 7: Return Result
+
+Return structured result indicating setup status.
+
+**Expected Output**:
+```json
+{
+  "installed": true,
+  "version": "5.x.x",
+  "config_file": "knip.json",
+  "config_created": true,
+  "scripts_added": ["knip", "knip:fix", "knip:deps", "knip:exports", "knip:files"],
+  "project_type": "nextjs|monorepo|standard",
+  "ready": true
+}
+```
+
+## Error Handling
+
+- **Installation fails**: Return error with package manager output
+- **Configuration invalid**: Return error with validation details
+- **Permission denied**: Return error suggesting sudo or permission fix
+- **Network error**: Return error suggesting offline installation
+
+## Examples
+
+### Example 1: Fresh Project (No Knip)
+
+**Initial State**:
+- package.json exists
+- No knip in devDependencies
+- No knip.json
+
+**Actions**:
+1. Install knip via detected package manager
+2. Detect project type (standard)
+3. Create knip.json with defaults
+4. Add npm scripts
+5. Validate installation
+
+**Output**:
+```json
+{
+  "installed": true,
+  "version": "5.73.3",
+  "config_file": "knip.json",
+  "config_created": true,
+  "scripts_added": ["knip", "knip:fix", "knip:deps", "knip:exports", "knip:files"],
+  "project_type": "standard",
+  "ready": true
+}
+```
+
+### Example 2: Next.js Project with Existing Knip
+
+**Initial State**:
+- package.json with next dependency
+- knip already in devDependencies
+- knip.json exists
+
+**Actions**:
+1. Detect knip installed (skip installation)
+2. Detect existing config (skip creation)
+3. Check scripts (add missing)
+4. Validate installation
+
+**Output**:
+```json
+{
+  "installed": true,
+  "version": "5.73.3",
+  "config_file": "knip.json",
+  "config_created": false,
+  "scripts_added": ["knip:deps"],
+  "project_type": "nextjs",
+  "ready": true
+}
+```
+
+### Example 3: Monorepo Project
+
+**Initial State**:
+- package.json with workspaces field
+- No knip
+
+**Actions**:
+1. Detect monorepo (workspaces in package.json)
+2. Install knip
+3. Create monorepo-specific knip.json
+4. Add npm scripts
+5. Validate installation
+
+**Output**:
+```json
+{
+  "installed": true,
+  "version": "5.73.3",
+  "config_file": "knip.json",
+  "config_created": true,
+  "scripts_added": ["knip", "knip:fix", "knip:deps", "knip:exports", "knip:files"],
+  "project_type": "monorepo",
+  "ready": true
+}
+```
+
+## Knip Command Reference
+
+For agents using Knip after setup:
+
+| Command | Purpose | Use Case |
+|---------|---------|----------|
+| `npx knip` | Full analysis | Complete dead code scan |
+| `npx knip --dependencies` | Dependencies only | dependency-auditor |
+| `npx knip --exports` | Exports only | Unused export detection |
+| `npx knip --files` | Files only | Unused file detection |
+| `npx knip --fix --fix-type exports,types` | Auto-fix exports/types | Safe automated cleanup |
+| `npx knip --fix --fix-type dependencies` | Auto-fix deps | Remove from package.json |
+| `npx knip --reporter json` | JSON output | Machine parsing |
+| `npx knip --reporter compact` | Compact output | Quick review |
+
+## CRITICAL SAFETY WARNING
+
+### NEVER Use `--allow-remove-files`
+
+**`npx knip --fix --allow-remove-files` is FORBIDDEN!**
+
+Knip has a critical limitation: **it cannot detect dynamic imports**.
+
+```typescript
+// Knip CANNOT see these relationships:
+const module = await import(`./plugins/${name}.ts`);
+const Component = lazy(() => import('./components/Dashboard'));
+require(`./locales/${lang}.json`);
+```
+
+Files loaded via dynamic imports will appear "unused" to Knip but are actually critical!
+
+### Safe Knip Usage
+
+**ALLOWED**:
+- `npx knip --fix --fix-type exports` - Safe: removes unused exports from files
+- `npx knip --fix --fix-type types` - Safe: removes unused type exports
+- `npx knip --fix --fix-type dependencies` - Safe: removes from package.json only
+
+**FORBIDDEN**:
+- `npx knip --fix --allow-remove-files` - DANGEROUS: may delete files with dynamic imports
+- `npx knip --fix` (without --fix-type) - May include file removal
+
+### Manual Verification Required
+
+Before removing ANY file flagged by Knip:
+1. Search for dynamic imports: `import(`, `require(`, `lazy(`, `loadable(`
+2. Check for string interpolation in imports
+3. Verify no config files reference the file
+4. Run build and tests after removal
+
+## Integration with Agents
+
+### dead-code-hunter Pre-Check
+
+```markdown
+## Phase 0: Pre-Flight
+
+1. Use setup-knip Skill to ensure Knip is available
+2. If result.ready === false, halt with setup instructions
+3. If result.ready === true, proceed with detection
+```
+
+### dependency-auditor Pre-Check
+
+```markdown
+## Phase 1: Environment Analysis
+
+1. Use setup-knip Skill before dependency analysis
+2. Knip will detect unused dependencies more accurately than manual grep
+```
+
+## Notes
+
+- Knip version 5.x is required (major improvements over v4)
+- Configuration is auto-detected for 100+ frameworks
+- Monorepo support is first-class
+- Use `--reporter json` for machine-readable output
+- The `--fix` flag can auto-remove unused exports and dependencies

package/.claude/skills/systematic-debugging/CREATION-LOG.md

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+# Creation Log: Systematic Debugging Skill
+
+Reference example of extracting, structuring, and bulletproofing a critical skill.
+
+## Source Material
+
+Extracted debugging framework from `/Users/jesse/.claude/CLAUDE.md`:
+- 4-phase systematic process (Investigation → Pattern Analysis → Hypothesis → Implementation)
+- Core mandate: ALWAYS find root cause, NEVER fix symptoms
+- Rules designed to resist time pressure and rationalization
+
+## Extraction Decisions
+
+**What to include:**
+- Complete 4-phase framework with all rules
+- Anti-shortcuts ("NEVER fix symptom", "STOP and re-analyze")
+- Pressure-resistant language ("even if faster", "even if I seem in a hurry")
+- Concrete steps for each phase
+
+**What to leave out:**
+- Project-specific context
+- Repetitive variations of same rule
+- Narrative explanations (condensed to principles)
+
+## Structure Following skill-creation/SKILL.md
+
+1. **Rich when_to_use** - Included symptoms and anti-patterns
+2. **Type: technique** - Concrete process with steps
+3. **Keywords** - "root cause", "symptom", "workaround", "debugging", "investigation"
+4. **Flowchart** - Decision point for "fix failed" → re-analyze vs add more fixes
+5. **Phase-by-phase breakdown** - Scannable checklist format
+6. **Anti-patterns section** - What NOT to do (critical for this skill)
+
+## Bulletproofing Elements
+
+Framework designed to resist rationalization under pressure:
+
+### Language Choices
+- "ALWAYS" / "NEVER" (not "should" / "try to")
+- "even if faster" / "even if I seem in a hurry"
+- "STOP and re-analyze" (explicit pause)
+- "Don't skip past" (catches the actual behavior)
+
+### Structural Defenses
+- **Phase 1 required** - Can't skip to implementation
+- **Single hypothesis rule** - Forces thinking, prevents shotgun fixes
+- **Explicit failure mode** - "IF your first fix doesn't work" with mandatory action
+- **Anti-patterns section** - Shows exactly what shortcuts look like
+
+### Redundancy
+- Root cause mandate in overview + when_to_use + Phase 1 + implementation rules
+- "NEVER fix symptom" appears 4 times in different contexts
+- Each phase has explicit "don't skip" guidance
+
+## Testing Approach
+
+Created 4 validation tests following skills/meta/testing-skills-with-subagents:
+
+### Test 1: Academic Context (No Pressure)
+- Simple bug, no time pressure
+- **Result:** Perfect compliance, complete investigation
+
+### Test 2: Time Pressure + Obvious Quick Fix
+- User "in a hurry", symptom fix looks easy
+- **Result:** Resisted shortcut, followed full process, found real root cause
+
+### Test 3: Complex System + Uncertainty
+- Multi-layer failure, unclear if can find root cause
+- **Result:** Systematic investigation, traced through all layers, found source
+
+### Test 4: Failed First Fix
+- Hypothesis doesn't work, temptation to add more fixes
+- **Result:** Stopped, re-analyzed, formed new hypothesis (no shotgun)
+
+**All tests passed.** No rationalizations found.
+
+## Iterations
+
+### Initial Version
+- Complete 4-phase framework
+- Anti-patterns section
+- Flowchart for "fix failed" decision
+
+### Enhancement 1: TDD Reference
+- Added link to skills/testing/test-driven-development
+- Note explaining TDD's "simplest code" ≠ debugging's "root cause"
+- Prevents confusion between methodologies
+
+## Final Outcome
+
+Bulletproof skill that:
+- ✅ Clearly mandates root cause investigation
+- ✅ Resists time pressure rationalization
+- ✅ Provides concrete steps for each phase
+- ✅ Shows anti-patterns explicitly
+- ✅ Tested under multiple pressure scenarios
+- ✅ Clarifies relationship to TDD
+- ✅ Ready for use
+
+## Key Insight
+
+**Most important bulletproofing:** Anti-patterns section showing exact shortcuts that feel justified in the moment. When Claude thinks "I'll just add this one quick fix", seeing that exact pattern listed as wrong creates cognitive friction.
+
+## Usage Example
+
+When encountering a bug:
+1. Load skill: skills/debugging/systematic-debugging
+2. Read overview (10 sec) - reminded of mandate
+3. Follow Phase 1 checklist - forced investigation
+4. If tempted to skip - see anti-pattern, stop
+5. Complete all phases - root cause found
+
+**Time investment:** 5-10 minutes
+**Time saved:** Hours of symptom-whack-a-mole
+
+---
+
+*Created: 2025-10-03*
+*Purpose: Reference example for skill extraction and bulletproofing*