clanka 0.2.15 → 0.2.17

package/dist/AgentTools.js

@@ -98,7 +98,7 @@ export const AgentTools = Toolkit.make(Tool.make("readFile", {
     parameters: Schema.Struct({
         command: Schema.String,
         timeoutMs: Schema.optional(Schema.Finite).annotate({
-            documentation: "Timeout in ms (default: 120000)",
+            documentation: "Timeout in ms (default: 120000, max 4 minutes)",
         }),
     }).annotate({
         identifier: "command",
@@ -113,7 +113,7 @@ export const AgentTools = Toolkit.make(Tool.make("readFile", {
     }),
     dependencies: [CurrentDirectory],
 }), Tool.make("applyPatch", {
-    description: "Apply a git diff / unified diff patch, or a wrapped patch, across one or more files.",
+    description: "Add, update or remove multiple files with a git diff / unified diff / wrapped patch.",
     parameters: Schema.String.annotate({
         identifier: "patch",
     }),
@@ -282,7 +282,7 @@ export const AgentToolHandlersNoDeps = AgentToolsWithSearch.toLayer(Effect.gen(f
             return yield* Effect.promise(() => Glob.glob(pattern, { cwd }));
         }),
         bash: Effect.fn("AgentTools.bash")(function* (options) {
-            const timeoutMs = options.timeoutMs ?? 120_000;
+            const timeoutMs = Math.min(options.timeoutMs ?? 120_000, 240_000);
             yield* Effect.logInfo(`Calling "bash"`).pipe(Effect.annotateLogs({
                 ...options,
                 timeoutMs,

package/dist/AgentTools.js.map

@@ -1 +1 @@
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package/dist/ScriptPreprocessing.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"ScriptPreprocessing.d.ts","sourceRoot":"","sources":["../src/ScriptPreprocessing.ts"],"names":[],"mappings":"AAgcA,eAAO,MAAM,gBAAgB,GAAI,QAAQ,MAAM,KAAG,MAM/C,CAAA"}
+{"version":3,"file":"ScriptPreprocessing.d.ts","sourceRoot":"","sources":["../src/ScriptPreprocessing.ts"],"names":[],"mappings":"AA8cA,eAAO,MAAM,gBAAgB,GAAI,QAAQ,MAAM,KAAG,MAM/C,CAAA"}

package/dist/ScriptPreprocessing.js

@@ -52,22 +52,28 @@ const needsTemplateEscaping = (text) => {
     }
     return false;
 };
+const normalizePatchEscapedQuotes = (text) => text.includes("*** Begin Patch")
+    ? text.replace(/\\"([A-Za-z0-9_$.-]+)\\"/g, '"$1"')
+    : text;
 const escapeTemplateLiteralContent = (text) => {
-    if (!needsTemplateEscaping(text)) {
-        return text;
+    const normalized = normalizePatchEscapedQuotes(text);
+    if (!needsTemplateEscaping(normalized)) {
+        return normalized;
     }
     let out = "";
-    for (let i = 0; i < text.length; i++) {
-        const char = text[i];
+    for (let i = 0; i < normalized.length; i++) {
+        const char = normalized[i];
         if (char === "\\") {
             out += "\\\\";
             continue;
         }
-        if (char === "`" && !isEscaped(text, i)) {
+        if (char === "`" && !isEscaped(normalized, i)) {
             out += "\\`";
             continue;
         }
-        if (char === "$" && text[i + 1] === "{" && !isEscaped(text, i)) {
+        if (char === "$" &&
+            normalized[i + 1] === "{" &&
+            !isEscaped(normalized, i)) {
             out += "\\$";
             continue;
         }
@@ -76,16 +82,17 @@ const escapeTemplateLiteralContent = (text) => {
     return out;
 };
 const findTemplateEnd = (text, start, isTerminator) => {
+    let end = -1;
     for (let i = start + 1; i < text.length; i++) {
         if (text[i] !== "`" || isEscaped(text, i)) {
             continue;
         }
         const next = skipWhitespace(text, i + 1);
         if (isTerminator(text[next])) {
-            return i;
+            end = i;
         }
     }
-    return -1;
+    return end;
 };
 const findTypeAnnotationAssignment = (text, start) => {
     let i = start;
@@ -333,6 +340,9 @@ const fixAssignedTemplatesForToolCalls = (script) => {
     for (const identifier of collectWriteFileContentIdentifiers(script)) {
         identifiers.add(identifier);
     }
+    if (script.includes("*** Begin Patch")) {
+        identifiers.add("patch");
+    }
     let out = script;
     for (const identifier of identifiers) {
         out = fixAssignedTemplate(out, identifier);

package/dist/ScriptPreprocessing.js.map

@@ -1 +1 @@
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package/dist/ScriptPreprocessing.test.js

@@ -99,7 +99,7 @@ describe("preprocessScript", () => {
         const output = preprocessScript(input);
         assert.strictEqual(output.includes(`const body = ${wrapTemplate(`const value = ${escaped}next${escaped}`)};`), true);
     });
-    it.each(["patch", "patch2", "patch3"])("fixes broken %s", (fixture) => {
+    it.each(["patch", "patch2", "patch3", "patch4", "patch5"])("fixes broken %s", (fixture) => {
         const content = readFileSync(join(__dirname, "fixtures", `${fixture}-broken.txt`), "utf-8");
         const fixed = readFileSync(join(__dirname, "fixtures", `${fixture}-fixed.txt`), "utf-8");
         assert.equal(preprocessScript(content), fixed);

package/dist/ScriptPreprocessing.test.js.map

@@ -1 +1 @@
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+{"version":3,"file":"ScriptPreprocessing.test.js","sourceRoot":"","sources":["../src/ScriptPreprocessing.test.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,MAAM,EAAE,QAAQ,EAAE,EAAE,EAAE,MAAM,gBAAgB,CAAA;AACrD,OAAO,EAAE,gBAAgB,EAAE,MAAM,0BAA0B,CAAA;AAC3D,OAAO,EAAE,YAAY,EAAE,MAAM,SAAS,CAAA;AACtC,OAAO,EAAE,IAAI,EAAE,MAAM,WAAW,CAAA;AAEhC,MAAM,IAAI,GAAG,GAAG,CAAA;AAChB,MAAM,OAAO,GAAG,KAAK,CAAA;AACrB,MAAM,oBAAoB,GAAG,MAAM,CAAA;AACnC,MAAM,YAAY,GAAG,CAAC,KAAa,EAAU,EAAE,CAAC,GAAG,IAAI,GAAG,KAAK,GAAG,IAAI,EAAE,CAAA;AAExE,QAAQ,CAAC,kBAAkB,EAAE,GAAG,EAAE;IAChC,EAAE,CAAC,oDAAoD,EAAE,GAAG,EAAE;QAC5D,MAAM,KAAK,GAAG;YACZ,oBAAoB;YACpB,iBAAiB;YACjB,iCAAiC;YACjC,IAAI;YACJ,yBAAyB;YACzB,yBAAyB;YACzB,eAAe;YACf,IAAI;SACL,CAAC,IAAI,CAAC,IAAI,CAAC,CAAA;QAEZ,MAAM,MAAM,GAAG,gBAAgB,CAAC,KAAK,CAAC,CAAA;QAEtC,MAAM,CAAC,WAAW,CAChB,MAAM,CAAC,QAAQ,CAAC,qBAAqB,OAAO,MAAM,OAAO,EAAE,CAAC,EAC5D,IAAI,CACL,CAAA;QACD,MAAM,CAAC,WAAW,CAChB,MAAM,CAAC,QAAQ,CAAC,qBAAqB,OAAO,MAAM,OAAO,EAAE,CAAC,EAC5D,IAAI,CACL,CAAA;IACH,CAAC,CAAC,CAAA;IAEF,EAAE,CAAC,yDAAyD,EAAE,GAAG,EAAE;QACjE,MAAM,KAAK,GAAG;YACZ,oBAAoB;YACpB,iBAAiB;YACjB,iCAAiC;YACjC,IAAI;YACJ,6BAA6B;YAC7B,eAAe;YACf,IAAI;SACL,CAAC,IAAI,CAAC,IAAI,CAAC,CAAA;QAEZ,MAAM,MAAM,GAAG,gBAAgB,CAAC,KAAK,CAAC,CAAA;QAEtC,MAAM,CAAC,WAAW,CAChB,MAAM,CAAC,QAAQ,CAAC,kBAAkB,oBAAoB,YAAY,CAAC,EACnE,IAAI,CACL,CAAA;IACH,CAAC,CAAC,CAAA;IAEF,EAAE,CAAC,2DAA2D,EAAE,GAAG,EAAE;QACnE,MAAM,KAAK,GAAG;YACZ,mBAAmB;YACnB,2BAA2B;YAC3B,oCAAoC;YACpC,IAAI;SACL,CAAC,IAAI,CAAC,IAAI,CAAC,CAAA;QAEZ,MAAM,MAAM,GAAG,gBAAgB,CAAC,KAAK,CAAC,CAAA;QAEtC,MAAM,CAAC,WAAW,CAChB,MAAM,CAAC,QAAQ,CACb,YAAY,YAAY,CAAC,iBAAiB,OAAO,OAAO,OAAO,EAAE,CAAC,GAAG,CACtE,EACD,IAAI,CACL,CAAA;IACH,CAAC,CAAC,CAAA;IAEF,EAAE,CAAC,sDAAsD,EAAE,GAAG,EAAE;QAC9D,MAAM,KAAK,GAAG,0DAA0D,CAAA;QAExE,MAAM,MAAM,GAAG,gBAAgB,CAAC,KAAK,CAAC,CAAA;QAEtC,MAAM,CAAC,WAAW,CAChB,MAAM,EACN,sBAAsB,YAAY,CAAC,eAAe,OAAO,cAAc,OAAO,WAAW,CAAC,GAAG,CAC9F,CAAA;IACH,CAAC,CAAC,CAAA;IAEF,EAAE,CAAC,mEAAmE,EAAE,GAAG,EAAE;QAC3E,MAAM,KAAK,GAAG;YACZ,oBAAoB,YAAY,CAAC,iBAAiB,OAAO,OAAO,OAAO,EAAE,CAAC,GAAG;YAC7E,oBAAoB,YAAY,CAAC,iBAAiB,oBAAoB,OAAO,CAAC,GAAG;YACjF,sDAAsD,YAAY,CAAC,WAAW,OAAO,OAAO,OAAO,EAAE,CAAC,KAAK;YAC3G,sBAAsB,YAAY,CAAC,iBAAiB,OAAO,OAAO,OAAO,aAAa,CAAC,GAAG;SAC3F,CAAC,IAAI,CAAC,IAAI,CAAC,CAAA;QAEZ,MAAM,CAAC,WAAW,CAAC,gBAAgB,CAAC,KAAK,CAAC,EAAE,KAAK,CAAC,CAAA;IACpD,CAAC,CAAC,CAAA;IAEF,EAAE,CAAC,2CAA2C,EAAE,GAAG,EAAE;QACnD,MAAM,KAAK,GAAG,2CAA2C,CAAA;QAEzD,MAAM,CAAC,WAAW,CAAC,gBAAgB,CAAC,KAAK,CAAC,EAAE,KAAK,CAAC,CAAA;IACpD,CAAC,CAAC,CAAA;IAEF,EAAE,CAAC,0EAA0E,EAAE,GAAG,EAAE;QAClF,MAAM,KAAK,GAAG;YACZ,gCAAgC;YAChC,iCAAiC;YACjC,IAAI;YACJ,yBAAyB;YACzB,yBAAyB;YACzB,iBAAiB;YACjB,yBAAyB;SAC1B,CAAC,IAAI,CAAC,IAAI,CAAC,CAAA;QAEZ,MAAM,MAAM,GAAG,gBAAgB,CAAC,KAAK,CAAC,CAAA;QAEtC,MAAM,CAAC,WAAW,CAChB,MAAM,CAAC,QAAQ,CAAC,qBAAqB,OAAO,MAAM,OAAO,EAAE,CAAC,EAC5D,IAAI,CACL,CAAA;QACD,MAAM,CAAC,WAAW,CAChB,MAAM,CAAC,QAAQ,CAAC,qBAAqB,OAAO,MAAM,OAAO,EAAE,CAAC,EAC5D,IAAI,CACL,CAAA;IACH,CAAC,CAAC,CAAA;IAEF,EAAE,CAAC,4EAA4E,EAAE,GAAG,EAAE;QACpF,MAAM,KAAK,GAAG;YACZ,uDAAuD;YACvD,6BAA6B;SAC9B,CAAC,IAAI,CAAC,IAAI,CAAC,CAAA;QAEZ,MAAM,MAAM,GAAG,gBAAgB,CAAC,KAAK,CAAC,CAAA;QAEtC,MAAM,CAAC,WAAW,CAChB,MAAM,EACN;YACE,mBAAmB,YAAY,CAAC,eAAe,OAAO,cAAc,OAAO,WAAW,CAAC,GAAG;YAC1F,6BAA6B;SAC9B,CAAC,IAAI,CAAC,IAAI,CAAC,CACb,CAAA;IACH,CAAC,CAAC,CAAA;IAEF,EAAE,CAAC,uEAAuE,EAAE,GAAG,EAAE;QAC/E,MAAM,KAAK,GAAG;YACZ,sCAAsC;YACtC,mBAAmB;YACnB,2BAA2B;YAC3B,kBAAkB;YAClB,IAAI;SACL,CAAC,IAAI,CAAC,IAAI,CAAC,CAAA;QAEZ,MAAM,MAAM,GAAG,gBAAgB,CAAC,KAAK,CAAC,CAAA;QAEtC,MAAM,CAAC,WAAW,CAChB,MAAM,CAAC,QAAQ,CACb,gBAAgB,YAAY,CAAC,iBAAiB,OAAO,OAAO,OAAO,EAAE,CAAC,GAAG,CAC1E,EACD,IAAI,CACL,CAAA;IACH,CAAC,CAAC,CAAA;IAEF,EAAE,CAAC,IAAI,CAAC,CAAC,OAAO,EAAE,QAAQ,EAAE,QAAQ,EAAE,QAAQ,EAAE,QAAQ,CAAC,CAAC,CACxD,iBAAiB,EACjB,CAAC,OAAO,EAAE,EAAE;QACV,MAAM,OAAO,GAAG,YAAY,CAC1B,IAAI,CAAC,SAAS,EAAE,UAAU,EAAE,GAAG,OAAO,aAAa,CAAC,EACpD,OAAO,CACR,CAAA;QACD,MAAM,KAAK,GAAG,YAAY,CACxB,IAAI,CAAC,SAAS,EAAE,UAAU,EAAE,GAAG,OAAO,YAAY,CAAC,EACnD,OAAO,CACR,CAAA;QACD,MAAM,CAAC,KAAK,CAAC,gBAAgB,CAAC,OAAO,CAAC,EAAE,KAAK,CAAC,CAAA;IAChD,CAAC,CACF,CAAA;AACH,CAAC,CAAC,CAAA"}

package/package.json

@@ -1,7 +1,7 @@
 {
   "name": "clanka",
   "type": "module",
-  "version": "0.2.15",
+  "version": "0.2.17",
   "publishConfig": {
     "access": "public"
   },

package/src/AgentTools.ts

@@ -124,7 +124,7 @@ export const AgentTools = Toolkit.make(
     parameters: Schema.Struct({
       command: Schema.String,
       timeoutMs: Schema.optional(Schema.Finite).annotate({
-        documentation: "Timeout in ms (default: 120000)",
+        documentation: "Timeout in ms (default: 120000, max 4 minutes)",
       }),
     }).annotate({
       identifier: "command",
@@ -143,7 +143,7 @@ export const AgentTools = Toolkit.make(
   }),
   Tool.make("applyPatch", {
     description:
-      "Apply a git diff / unified diff patch, or a wrapped patch, across one or more files.",
+      "Add, update or remove multiple files with a git diff / unified diff / wrapped patch.",
     parameters: Schema.String.annotate({
       identifier: "patch",
     }),
@@ -372,7 +372,7 @@ export const AgentToolHandlersNoDeps = AgentToolsWithSearch.toLayer(
         return yield* Effect.promise(() => Glob.glob(pattern, { cwd }))
       }),
       bash: Effect.fn("AgentTools.bash")(function* (options) {
-        const timeoutMs = options.timeoutMs ?? 120_000
+        const timeoutMs = Math.min(options.timeoutMs ?? 120_000, 240_000)
         yield* Effect.logInfo(`Calling "bash"`).pipe(
           Effect.annotateLogs({
             ...options,

package/src/ScriptPreprocessing.test.ts

@@ -157,15 +157,18 @@ describe("preprocessScript", () => {
     )
   })
 
-  it.each(["patch", "patch2", "patch3"])("fixes broken %s", (fixture) => {
-    const content = readFileSync(
-      join(__dirname, "fixtures", `${fixture}-broken.txt`),
-      "utf-8",
-    )
-    const fixed = readFileSync(
-      join(__dirname, "fixtures", `${fixture}-fixed.txt`),
-      "utf-8",
-    )
-    assert.equal(preprocessScript(content), fixed)
-  })
+  it.each(["patch", "patch2", "patch3", "patch4", "patch5"])(
+    "fixes broken %s",
+    (fixture) => {
+      const content = readFileSync(
+        join(__dirname, "fixtures", `${fixture}-broken.txt`),
+        "utf-8",
+      )
+      const fixed = readFileSync(
+        join(__dirname, "fixtures", `${fixture}-fixed.txt`),
+        "utf-8",
+      )
+      assert.equal(preprocessScript(content), fixed)
+    },
+  )
 })

package/src/ScriptPreprocessing.ts

@@ -74,23 +74,33 @@ const needsTemplateEscaping = (text: string): boolean => {
   return false
 }
 
+const normalizePatchEscapedQuotes = (text: string): string =>
+  text.includes("*** Begin Patch")
+    ? text.replace(/\\"([A-Za-z0-9_$.-]+)\\"/g, '"$1"')
+    : text
+
 const escapeTemplateLiteralContent = (text: string): string => {
-  if (!needsTemplateEscaping(text)) {
-    return text
+  const normalized = normalizePatchEscapedQuotes(text)
+  if (!needsTemplateEscaping(normalized)) {
+    return normalized
   }
 
   let out = ""
-  for (let i = 0; i < text.length; i++) {
-    const char = text[i]!
+  for (let i = 0; i < normalized.length; i++) {
+    const char = normalized[i]!
     if (char === "\\") {
       out += "\\\\"
       continue
     }
-    if (char === "`" && !isEscaped(text, i)) {
+    if (char === "`" && !isEscaped(normalized, i)) {
       out += "\\`"
       continue
     }
-    if (char === "$" && text[i + 1] === "{" && !isEscaped(text, i)) {
+    if (
+      char === "$" &&
+      normalized[i + 1] === "{" &&
+      !isEscaped(normalized, i)
+    ) {
       out += "\\$"
       continue
     }
@@ -104,16 +114,17 @@ const findTemplateEnd = (
   start: number,
   isTerminator: (char: string | undefined) => boolean,
 ): number => {
+  let end = -1
   for (let i = start + 1; i < text.length; i++) {
     if (text[i] !== "`" || isEscaped(text, i)) {
       continue
     }
     const next = skipWhitespace(text, i + 1)
     if (isTerminator(text[next])) {
-      return i
+      end = i
     }
   }
-  return -1
+  return end
 }
 
 const findTypeAnnotationAssignment = (text: string, start: number): number => {
@@ -438,6 +449,9 @@ const fixAssignedTemplatesForToolCalls = (script: string): string => {
   for (const identifier of collectWriteFileContentIdentifiers(script)) {
     identifiers.add(identifier)
   }
+  if (script.includes("*** Begin Patch")) {
+    identifiers.add("patch")
+  }
 
   let out = script
   for (const identifier of identifiers) {

package/src/fixtures/patch4-broken.txt

@@ -0,0 +1,6 @@
+await writeFile({path:'.changeset/eff-702-schema-type-extractors.md', content:`---
+"effect": major
+---
+
+Schema: move type extractors to top-level names (`Schema.Type`, `Schema.Encoded`, `Schema.DecodingServices`, `Schema.EncodingServices`, `Schema.ToAsserts`) and remove the previous namespace forms (`Schema.Schema.Type`, `Schema.Codec.*`).
+`}); console.log('written');

package/src/fixtures/patch4-fixed.txt

@@ -0,0 +1,6 @@
+await writeFile({path:'.changeset/eff-702-schema-type-extractors.md', content:`---
+"effect": major
+---
+
+Schema: move type extractors to top-level names (\`Schema.Type\`, \`Schema.Encoded\`, \`Schema.DecodingServices\`, \`Schema.EncodingServices\`, \`Schema.ToAsserts\`) and remove the previous namespace forms (\`Schema.Schema.Type\`, \`Schema.Codec.*\`).
+`}); console.log('written');

package/src/fixtures/patch5-broken.txt

@@ -0,0 +1,227 @@
+const patch = `*** Begin Patch
+*** Update File: src/commands/root.ts
+@@
+ import {
+   Config,
++  Data,
+   Deferred,
+   Duration,
+   Effect,
+   Fiber,
+@@
+ const runRalph = Effect.fnUntraced(
+@@
+ )
++
++class RalphSpecMissing extends Data.TaggedError("RalphSpecMissing")<{
++  readonly projectId: Project["id"]
++}> {
++  readonly message = `Project "${this.projectId}" is configured with gitFlow=\"ralph\" but is missing \"ralphSpec\". Run 'lalph projects edit' and set "Path to Ralph spec file".`
++}
++
++type ProjectExecutionMode =
++  | {
++      readonly _tag: "standard"
++      readonly gitFlow: "pr" | "commit"
++    }
++  | {
++      readonly _tag: "ralph"
++      readonly specFile: string
++    }
+
+ const runProject = Effect.fnUntraced(
+   function* (options: {
+@@
+     const iterationsDisplay = isFinite ? options.iterations : "unlimited"
+     const semaphore = Semaphore.makeUnsafe(options.project.concurrency)
+     const fibers = yield* FiberSet.make()
++
++    let executionMode: ProjectExecutionMode
++    if (options.project.gitFlow === "ralph") {
++      if (!options.project.ralphSpec) {
++        return yield* new RalphSpecMissing({
++          projectId: options.project.id,
++        })
++      }
++      executionMode = {
++        _tag: "ralph",
++        specFile: options.project.ralphSpec,
++      }
++    } else {
++      executionMode = {
++        _tag: "standard",
++        gitFlow: options.project.gitFlow,
++      }
++    }
++
++    const resolveGitFlowLayer = () => {
++      if (executionMode._tag === "ralph") {
++        return GitFlowRalph
++      }
++      if (executionMode.gitFlow === "commit") {
++        return GitFlowCommit
++      }
++      return GitFlowPR
++    }
++
++    const resolveRunEffect = (startedDeferred: Deferred.Deferred<void>) => {
++      if (executionMode._tag === "ralph") {
++        return runRalph({
++          targetBranch: options.project.targetBranch,
++          stallTimeout: options.stallTimeout,
++          runTimeout: options.runTimeout,
++          review: options.project.reviewAgent,
++          research: options.project.researchAgent,
++          specFile: executionMode.specFile,
++        })
++      }
++      return run({
++        startedDeferred,
++        targetBranch: options.project.targetBranch,
++        specsDirectory: options.specsDirectory,
++        stallTimeout: options.stallTimeout,
++        runTimeout: options.runTimeout,
++        review: options.project.reviewAgent,
++        research: options.project.researchAgent,
++      })
++    }
++
++    const waitForIteration = (
++      startedDeferred: Deferred.Deferred<void>,
++      fiber: Fiber.Fiber<void, never>,
++    ) => {
++      if (executionMode._tag === "ralph") {
++        return Fiber.await(fiber)
++      }
++      return Deferred.await(startedDeferred)
++    }
++
++    const handleChosenTaskNotFound = (
++      currentIteration: number,
++      markRalphDone: () => void,
++    ) => {
++      if (executionMode._tag !== "ralph") {
++        return Effect.void
++      }
++      markRalphDone()
++      return Effect.log(
++        `No more work to process for Ralph, ending after ${currentIteration + 1} iteration(s).`,
++      )
++    }
++
++    const handleNoMoreWork = (
++      currentIteration: number,
++      setIterations: (iterations: number) => void,
++    ) => {
++      if (executionMode._tag === "ralph") {
++        return Effect.void
++      }
++      if (isFinite) {
++        // If we have a finite number of iterations, we exit when no more
++        // work is found
++        setIterations(currentIteration)
++        return Effect.log(
++          `No more work to process, ending after ${currentIteration} iteration(s).`,
++        )
++      }
++      const log =
++        Iterable.size(fibers) <= 1
++          ? Effect.log("No more work to process, waiting 30 seconds...")
++          : Effect.void
++      return Effect.andThen(log, Effect.sleep(Duration.seconds(30)))
++    }
+
+     yield* resetInProgress.pipe(Effect.withSpan("Main.resetInProgress"))
+@@
+       const currentIteration = iteration
+
+       const startedDeferred = yield* Deferred.make<void>()
+       let ralphDone = false
+
+-      const gitFlow = options.project.gitFlow
+-      const isRalph = gitFlow === "ralph"
+-      const gitFlowLayer =
+-        gitFlow === "commit"
+-          ? GitFlowCommit
+-          : gitFlow === "ralph"
+-            ? GitFlowRalph
+-            : GitFlowPR
++      const gitFlowLayer = resolveGitFlowLayer()
+       const fiber = yield* checkForWork(options.project).pipe(
+         Effect.andThen(
+           Unify.unify(
+-            isRalph
+-              ? runRalph({
+-                  targetBranch: options.project.targetBranch,
+-                  stallTimeout: options.stallTimeout,
+-                  runTimeout: options.runTimeout,
+-                  review: options.project.reviewAgent,
+-                  research: options.project.researchAgent,
+-                  specFile: options.project.ralphSpec!,
+-                })
+-              : run({
+-                  startedDeferred,
+-                  targetBranch: options.project.targetBranch,
+-                  specsDirectory: options.specsDirectory,
+-                  stallTimeout: options.stallTimeout,
+-                  runTimeout: options.runTimeout,
+-                  review: options.project.reviewAgent,
+-                  research: options.project.researchAgent,
+-                }),
++            resolveRunEffect(startedDeferred),
+           ).pipe(
+             Effect.provide(gitFlowLayer, { local: true }),
+             withWorkerState(options.project.id),
+           ),
+         ),
+         Effect.catchTags({
+           ChosenTaskNotFound(_error) {
+-            if (isRalph) {
+-              ralphDone = true
+-              return Effect.log(
+-                `No more work to process for Ralph, ending after ${currentIteration + 1} iteration(s).`,
+-              )
+-            }
+-            return Effect.void
++            return handleChosenTaskNotFound(currentIteration, () => {
++              ralphDone = true
++            })
+           },
+           NoMoreWork(_error) {
+-            if (isFinite) {
+-              // If we have a finite number of iterations, we exit when no more
+-              // work is found
+-              iterations = currentIteration
+-              return Effect.log(
+-                `No more work to process, ending after ${currentIteration} iteration(s).`,
+-              )
+-            }
+-            const log =
+-              Iterable.size(fibers) <= 1
+-                ? Effect.log("No more work to process, waiting 30 seconds...")
+-                : Effect.void
+-            return Effect.andThen(log, Effect.sleep(Duration.seconds(30)))
++            return handleNoMoreWork(currentIteration, (newIterations) => {
++              iterations = newIterations
++            })
+           },
+           QuitError(_error) {
+             quit = true
+@@
+         Effect.ensuring(Deferred.completeWith(startedDeferred, Effect.void)),
+         FiberSet.run(fibers),
+       )
+-      if (isRalph) {
+-        yield* Fiber.await(fiber)
+-        if (ralphDone) break
+-      } else {
+-        yield* Deferred.await(startedDeferred)
++
++      yield* waitForIteration(startedDeferred, fiber)
++      if (executionMode._tag === "ralph" && ralphDone) {
++        break
+       }
++
+       iteration++
+     }
+*** End Patch`;

package/src/fixtures/patch5-fixed.txt

@@ -0,0 +1,227 @@
+const patch = `*** Begin Patch
+*** Update File: src/commands/root.ts
+@@
+ import {
+   Config,
++  Data,
+   Deferred,
+   Duration,
+   Effect,
+   Fiber,
+@@
+ const runRalph = Effect.fnUntraced(
+@@
+ )
++
++class RalphSpecMissing extends Data.TaggedError("RalphSpecMissing")<{
++  readonly projectId: Project["id"]
++}> {
++  readonly message = \`Project "\${this.projectId}" is configured with gitFlow="ralph" but is missing "ralphSpec". Run 'lalph projects edit' and set "Path to Ralph spec file".\`
++}
++
++type ProjectExecutionMode =
++  | {
++      readonly _tag: "standard"
++      readonly gitFlow: "pr" | "commit"
++    }
++  | {
++      readonly _tag: "ralph"
++      readonly specFile: string
++    }
+
+ const runProject = Effect.fnUntraced(
+   function* (options: {
+@@
+     const iterationsDisplay = isFinite ? options.iterations : "unlimited"
+     const semaphore = Semaphore.makeUnsafe(options.project.concurrency)
+     const fibers = yield* FiberSet.make()
++
++    let executionMode: ProjectExecutionMode
++    if (options.project.gitFlow === "ralph") {
++      if (!options.project.ralphSpec) {
++        return yield* new RalphSpecMissing({
++          projectId: options.project.id,
++        })
++      }
++      executionMode = {
++        _tag: "ralph",
++        specFile: options.project.ralphSpec,
++      }
++    } else {
++      executionMode = {
++        _tag: "standard",
++        gitFlow: options.project.gitFlow,
++      }
++    }
++
++    const resolveGitFlowLayer = () => {
++      if (executionMode._tag === "ralph") {
++        return GitFlowRalph
++      }
++      if (executionMode.gitFlow === "commit") {
++        return GitFlowCommit
++      }
++      return GitFlowPR
++    }
++
++    const resolveRunEffect = (startedDeferred: Deferred.Deferred<void>) => {
++      if (executionMode._tag === "ralph") {
++        return runRalph({
++          targetBranch: options.project.targetBranch,
++          stallTimeout: options.stallTimeout,
++          runTimeout: options.runTimeout,
++          review: options.project.reviewAgent,
++          research: options.project.researchAgent,
++          specFile: executionMode.specFile,
++        })
++      }
++      return run({
++        startedDeferred,
++        targetBranch: options.project.targetBranch,
++        specsDirectory: options.specsDirectory,
++        stallTimeout: options.stallTimeout,
++        runTimeout: options.runTimeout,
++        review: options.project.reviewAgent,
++        research: options.project.researchAgent,
++      })
++    }
++
++    const waitForIteration = (
++      startedDeferred: Deferred.Deferred<void>,
++      fiber: Fiber.Fiber<void, never>,
++    ) => {
++      if (executionMode._tag === "ralph") {
++        return Fiber.await(fiber)
++      }
++      return Deferred.await(startedDeferred)
++    }
++
++    const handleChosenTaskNotFound = (
++      currentIteration: number,
++      markRalphDone: () => void,
++    ) => {
++      if (executionMode._tag !== "ralph") {
++        return Effect.void
++      }
++      markRalphDone()
++      return Effect.log(
++        \`No more work to process for Ralph, ending after \${currentIteration + 1} iteration(s).\`,
++      )
++    }
++
++    const handleNoMoreWork = (
++      currentIteration: number,
++      setIterations: (iterations: number) => void,
++    ) => {
++      if (executionMode._tag === "ralph") {
++        return Effect.void
++      }
++      if (isFinite) {
++        // If we have a finite number of iterations, we exit when no more
++        // work is found
++        setIterations(currentIteration)
++        return Effect.log(
++          \`No more work to process, ending after \${currentIteration} iteration(s).\`,
++        )
++      }
++      const log =
++        Iterable.size(fibers) <= 1
++          ? Effect.log("No more work to process, waiting 30 seconds...")
++          : Effect.void
++      return Effect.andThen(log, Effect.sleep(Duration.seconds(30)))
++    }
+
+     yield* resetInProgress.pipe(Effect.withSpan("Main.resetInProgress"))
+@@
+       const currentIteration = iteration
+
+       const startedDeferred = yield* Deferred.make<void>()
+       let ralphDone = false
+
+-      const gitFlow = options.project.gitFlow
+-      const isRalph = gitFlow === "ralph"
+-      const gitFlowLayer =
+-        gitFlow === "commit"
+-          ? GitFlowCommit
+-          : gitFlow === "ralph"
+-            ? GitFlowRalph
+-            : GitFlowPR
++      const gitFlowLayer = resolveGitFlowLayer()
+       const fiber = yield* checkForWork(options.project).pipe(
+         Effect.andThen(
+           Unify.unify(
+-            isRalph
+-              ? runRalph({
+-                  targetBranch: options.project.targetBranch,
+-                  stallTimeout: options.stallTimeout,
+-                  runTimeout: options.runTimeout,
+-                  review: options.project.reviewAgent,
+-                  research: options.project.researchAgent,
+-                  specFile: options.project.ralphSpec!,
+-                })
+-              : run({
+-                  startedDeferred,
+-                  targetBranch: options.project.targetBranch,
+-                  specsDirectory: options.specsDirectory,
+-                  stallTimeout: options.stallTimeout,
+-                  runTimeout: options.runTimeout,
+-                  review: options.project.reviewAgent,
+-                  research: options.project.researchAgent,
+-                }),
++            resolveRunEffect(startedDeferred),
+           ).pipe(
+             Effect.provide(gitFlowLayer, { local: true }),
+             withWorkerState(options.project.id),
+           ),
+         ),
+         Effect.catchTags({
+           ChosenTaskNotFound(_error) {
+-            if (isRalph) {
+-              ralphDone = true
+-              return Effect.log(
+-                \`No more work to process for Ralph, ending after \${currentIteration + 1} iteration(s).\`,
+-              )
+-            }
+-            return Effect.void
++            return handleChosenTaskNotFound(currentIteration, () => {
++              ralphDone = true
++            })
+           },
+           NoMoreWork(_error) {
+-            if (isFinite) {
+-              // If we have a finite number of iterations, we exit when no more
+-              // work is found
+-              iterations = currentIteration
+-              return Effect.log(
+-                \`No more work to process, ending after \${currentIteration} iteration(s).\`,
+-              )
+-            }
+-            const log =
+-              Iterable.size(fibers) <= 1
+-                ? Effect.log("No more work to process, waiting 30 seconds...")
+-                : Effect.void
+-            return Effect.andThen(log, Effect.sleep(Duration.seconds(30)))
++            return handleNoMoreWork(currentIteration, (newIterations) => {
++              iterations = newIterations
++            })
+           },
+           QuitError(_error) {
+             quit = true
+@@
+         Effect.ensuring(Deferred.completeWith(startedDeferred, Effect.void)),
+         FiberSet.run(fibers),
+       )
+-      if (isRalph) {
+-        yield* Fiber.await(fiber)
+-        if (ralphDone) break
+-      } else {
+-        yield* Deferred.await(startedDeferred)
++
++      yield* waitForIteration(startedDeferred, fiber)
++      if (executionMode._tag === "ralph" && ralphDone) {
++        break
+       }
++
+       iteration++
+     }
+*** End Patch`;