circle-ir-ai 2.21.0 → 2.26.0

package/dist/cluster/cluster.js.map

@@ -0,0 +1 @@
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package/dist/cluster/index.d.ts

@@ -0,0 +1,11 @@
+/**
+ * Cluster layer public surface.
+ *
+ * Foundation only (cognium-ai#154, P4 of epic #155). Re-exports the
+ * primitives that downstream wiring tickets (meta.json schema, CLI
+ * flag, benchmark validation) will consume — see `cluster.ts`
+ * file-header for the scope split.
+ */
+export { clusterFiles, extractClusterVector, computeNormalization, euclideanCkDistance, jaccardDistance, mixedDistance, DEFAULT_CLUSTER_POLICY, } from './cluster.js';
+export type { ClusterVector, ClusterInput, ClusterAssignment, ClusterResult, ClusterPolicy, ContextProfile, } from './cluster.js';
+//# sourceMappingURL=index.d.ts.map

package/dist/cluster/index.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../src/cluster/index.ts"],"names":[],"mappings":"AAAA;;;;;;;GAOG;AAEH,OAAO,EACL,YAAY,EACZ,oBAAoB,EACpB,oBAAoB,EACpB,mBAAmB,EACnB,eAAe,EACf,aAAa,EACb,sBAAsB,GACvB,MAAM,cAAc,CAAC;AAEtB,YAAY,EACV,aAAa,EACb,YAAY,EACZ,iBAAiB,EACjB,aAAa,EACb,aAAa,EACb,cAAc,GACf,MAAM,cAAc,CAAC"}

package/dist/cluster/index.js

@@ -0,0 +1,10 @@
+/**
+ * Cluster layer public surface.
+ *
+ * Foundation only (cognium-ai#154, P4 of epic #155). Re-exports the
+ * primitives that downstream wiring tickets (meta.json schema, CLI
+ * flag, benchmark validation) will consume — see `cluster.ts`
+ * file-header for the scope split.
+ */
+export { clusterFiles, extractClusterVector, computeNormalization, euclideanCkDistance, jaccardDistance, mixedDistance, DEFAULT_CLUSTER_POLICY, } from './cluster.js';
+//# sourceMappingURL=index.js.map

package/dist/cluster/index.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/cluster/index.ts"],"names":[],"mappings":"AAAA;;;;;;;GAOG;AAEH,OAAO,EACL,YAAY,EACZ,oBAAoB,EACpB,oBAAoB,EACpB,mBAAmB,EACnB,eAAe,EACf,aAAa,EACb,sBAAsB,GACvB,MAAM,cAAc,CAAC"}

package/dist/index.d.ts

@@ -55,4 +55,5 @@ export { analyzeComponents, enrichComponent, enrichComponents, clusterComponents
 export { summarizeFunction, summarizeAllFunctions, summarizeModule, detectRole, type FunctionEffect, type SideEffect, type SideEffectKind, type ModuleSummary, type ModuleRole, type UnderstandOptions, type UnderstandResult, } from './understand/index.js';
 export { analyzeSpecGap, parseSpecMd, type SpecGapResult, type SpecGapOptions, type RequirementMatch, type UncoveredRequirement, type UndocumentedBehavior, } from './spec-gap/index.js';
 export { loadCogniumConfig, convertCogniumConfigToPassOptions, type CogniumConfig, type Suppression, } from './config/cognium-config.js';
+export { clusterFiles, extractClusterVector, computeNormalization, euclideanCkDistance, jaccardDistance, mixedDistance, DEFAULT_CLUSTER_POLICY, type ClusterVector, type ClusterInput, type ClusterAssignment, type ClusterResult, type ClusterPolicy, type ContextProfile, } from './cluster/index.js';
 //# sourceMappingURL=index.d.ts.map

package/dist/index.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA;;;;;;;GAOG;AAGH,cAAc,WAAW,CAAC;AAG1B,OAAO,EAAE,yBAAyB,EAAE,qBAAqB,EAAE,MAAM,0BAA0B,CAAC;AAG5F,OAAO,EAAE,MAAM,EAAE,eAAe,EAAE,MAAM,mBAAmB,CAAC;AAG5D,OAAO,EACL,sBAAsB,EACtB,SAAS,EACT,gBAAgB,EAChB,KAAK,SAAS,IAAI,mBAAmB,GACtC,MAAM,yBAAyB,CAAC;AAGjC,OAAO,EAAE,kBAAkB,EAAE,MAAM,iCAAiC,CAAC;AAGrE,OAAO,EACL,WAAW,EACX,cAAc,EACd,KAAK,OAAO,GACb,MAAM,oBAAoB,CAAC;AAE5B,OAAO,EACL,eAAe,EACf,gBAAgB,EAChB,mBAAmB,EACnB,iBAAiB,EACjB,KAAK,SAAS,EACd,KAAK,WAAW,GACjB,MAAM,iBAAiB,CAAC;AAGzB,OAAO,EACL,gBAAgB,EAChB,mBAAmB,EACnB,UAAU,EACV,KAAK,gBAAgB,EACrB,KAAK,wBAAwB,EAC7B,KAAK,gBAAgB,EACrB,KAAK,cAAc,EACnB,KAAK,qBAAqB,GAC3B,MAAM,qBAAqB,CAAC;AAG7B,OAAO,EACL,kBAAkB,EAClB,qBAAqB,EACrB,eAAe,EACf,mBAAmB,EACnB,KAAK,kBAAkB,EACvB,KAAK,iBAAiB,EACtB,KAAK,mBAAmB,EACxB,KAAK,cAAc,GACpB,MAAM,uBAAuB,CAAC;AAG/B,OAAO,EACL,iBAAiB,EACjB,uBAAuB,EACvB,KAAK,YAAY,EACjB,KAAK,WAAW,EAChB,KAAK,UAAU,EACf,KAAK,SAAS,IAAI,cAAc,GACjC,MAAM,0BAA0B,CAAC;AAGlC,OAAO,EACL,WAAW,EACX,iBAAiB,EACjB,KAAK,aAAa,EAClB,KAAK,cAAc,GACpB,MAAM,6BAA6B,CAAC;AAGrC,OAAO,EACL,eAAe,EACf,cAAc,EACd,aAAa,EACb,SAAS,EACT,gBAAgB,EAChB,iBAAiB,EACjB,KAAK,WAAW,EAChB,KAAK,YAAY,EACjB,KAAK,UAAU,EACf,KAAK,QAAQ,EACb,KAAK,WAAW,EAChB,KAAK,YAAY,EACjB,KAAK,WAAW,EAChB,KAAK,UAAU,IAAI,kBAAkB,GACtC,MAAM,0BAA0B,CAAC;AAElC,OAAO,EACL,eAAe,EACf,uBAAuB,EACvB,sBAAsB,EACtB,2BAA2B,EAC3B,KAAK,aAAa,EAClB,KAAK,YAAY,GAClB,MAAM,kCAAkC,CAAC;AAE1C,OAAO,EACL,YAAY,EACZ,eAAe,EACf,SAAS,EACT,KAAK,SAAS,EACd,KAAK,UAAU,EACf,KAAK,eAAe,EACpB,KAAK,YAAY,GAClB,MAAM,kCAAkC,CAAC;AAG1C,OAAO,EACL,gBAAgB,EAChB,cAAc,EACd,kBAAkB,EAClB,oBAAoB,EACpB,KAAK,eAAe,EACpB,KAAK,iBAAiB,EACtB,KAAK,cAAc,EACnB,KAAK,UAAU,EACf,KAAK,YAAY,EACjB,KAAK,eAAe,EACpB,KAAK,aAAa,GACnB,MAAM,sBAAsB,CAAC;AAG9B,OAAO,EACL,aAAa,EACb,cAAc,EACd,eAAe,EACf,kBAAkB,EAClB,eAAe,EACf,gBAAgB,EAChB,qBAAqB,EACrB,qBAAqB,EACrB,oBAAoB,EACpB,KAAK,aAAa,EAClB,KAAK,cAAc,EACnB,KAAK,iBAAiB,EACtB,KAAK,YAAY,IAAI,kBAAkB,EACvC,KAAK,cAAc,EACnB,KAAK,gBAAgB,GACtB,MAAM,wBAAwB,CAAC;AAGhC,OAAO,EACL,qBAAqB,EACrB,oBAAoB,EACpB,gBAAgB,EAChB,kBAAkB,EAClB,eAAe,EACf,sBAAsB,EACtB,6BAA6B,EAC7B,qBAAqB,EACrB,yBAAyB,EACzB,aAAa,EACb,aAAa,EACb,KAAK,kBAAkB,EACvB,KAAK,kBAAkB,EACvB,KAAK,iBAAiB,EACtB,KAAK,YAAY,EACjB,KAAK,eAAe,EACpB,KAAK,sBAAsB,EAC3B,KAAK,cAAc,EACnB,KAAK,kBAAkB,GACxB,MAAM,yBAAyB,CAAC;AAGjC,OAAO,EACL,eAAe,EACf,kBAAkB,EAClB,uBAAuB,EACvB,0BAA0B,EAC1B,KAAK,eAAe,EACpB,KAAK,uBAAuB,EAC5B,KAAK,gBAAgB,GACtB,MAAM,oBAAoB,CAAC;AAG5B,OAAO,EACL,WAAW,EACX,iBAAiB,EACjB,aAAa,EACb,kBAAkB,EAClB,gBAAgB,EAChB,wBAAwB,EACxB,aAAa,EACb,WAAW,EACX,aAAa,EACb,KAAK,UAAU,EACf,KAAK,YAAY,EACjB,KAAK,cAAc,EACnB,KAAK,WAAW,EAChB,KAAK,SAAS,EACd,KAAK,eAAe,EACpB,KAAK,YAAY,EACjB,KAAK,YAAY,EACjB,KAAK,UAAU,EACf,KAAK,kBAAkB,EACvB,KAAK,gBAAgB,EACrB,KAAK,iBAAiB,EACtB,KAAK,YAAY,GAClB,MAAM,yBAAyB,CAAC;AAGjC,OAAO,EACL,SAAS,EACT,gBAAgB,EAChB,kBAAkB,EAClB,KAAK,UAAU,EACf,KAAK,gBAAgB,GACtB,MAAM,uBAAuB,CAAC;AAE/B,OAAO,EACL,mBAAmB,EACnB,sBAAsB,EACtB,wBAAwB,EACxB,KAAK,0BAA0B,GAChC,MAAM,iCAAiC,CAAC;AAGzC,OAAO,EACL,iBAAiB,EACjB,6BAA6B,EAC7B,eAAe,EACf,YAAY,EACZ,kBAAkB,EAClB,eAAe,EACf,UAAU,EACV,mBAAmB,EACnB,KAAK,gBAAgB,EACrB,KAAK,eAAe,EACpB,KAAK,YAAY,EACjB,KAAK,aAAa,EAClB,KAAK,WAAW,EAChB,KAAK,kBAAkB,EACvB,KAAK,kBAAkB,GACxB,MAAM,sBAAsB,CAAC;AAG9B,OAAO,EACL,KAAK,WAAW,EAChB,KAAK,aAAa,EAClB,KAAK,eAAe,EACpB,KAAK,aAAa,EAClB,KAAK,OAAO,EACZ,KAAK,WAAW,EAChB,KAAK,mBAAmB,EACxB,KAAK,YAAY,EACjB,KAAK,gBAAgB,EACrB,KAAK,oBAAoB,IAAI,0BAA0B,EACvD,KAAK,gBAAgB,IAAI,qBAAqB,EAC9C,KAAK,iBAAiB,GACvB,MAAM,mBAAmB,CAAC;AAE3B,OAAO,EAAE,eAAe,EAAE,mBAAmB,EAAE,0BAA0B,EAAE,MAAM,2BAA2B,CAAC;AAC7G,OAAO,EAAE,kBAAkB,EAAE,MAAM,4BAA4B,CAAC;AAChE,OAAO,EAAE,0BAA0B,EAAE,MAAM,iCAAiC,CAAC;AAC7E,OAAO,EAAE,yBAAyB,EAAE,MAAM,gCAAgC,CAAC;AAC3E,OAAO,EAAE,qBAAqB,EAAE,cAAc,EAAE,MAAM,6BAA6B,CAAC;AAGpF,OAAO,EACL,cAAc,EACd,sBAAsB,EACtB,kBAAkB,EAClB,mBAAmB,EACnB,cAAc,EACd,KAAK,cAAc,EACnB,KAAK,SAAS,EACd,KAAK,eAAe,EACpB,KAAK,eAAe,EACpB,KAAK,oBAAoB,EACzB,KAAK,cAAc,EACnB,KAAK,kBAAkB,EACvB,KAAK,uBAAuB,GAC7B,MAAM,oBAAoB,CAAC;AAG5B,OAAO,EAAE,wBAAwB,EAAE,MAAM,kCAAkC,CAAC;AAC5E,OAAO,EAAE,KAAK,iBAAiB,EAAE,iBAAiB,EAAE,8BAA8B,EAAE,MAAM,uBAAuB,CAAC;AAGlH,OAAO,EACL,KAAK,aAAa,EAClB,KAAK,SAAS,EACd,KAAK,YAAY,EACjB,KAAK,eAAe,EACpB,KAAK,gBAAgB,EACrB,eAAe,EACf,WAAW,EACX,gBAAgB,EAChB,eAAe,EACf,oBAAoB,EACpB,KAAK,uBAAuB,EAC5B,qBAAqB,EACrB,0BAA0B,EAC1B,qBAAqB,EACrB,iBAAiB,EACjB,KAAK,wBAAwB,EAC7B,KAAK,6BAA6B,EAClC,KAAK,cAAc,EACnB,KAAK,iBAAiB,EACtB,KAAK,kBAAkB,EACvB,KAAK,gBAAgB,EACrB,sBAAsB,EACtB,KAAK,yBAAyB,EAC9B,mBAAmB,EACnB,KAAK,sBAAsB,EAC3B,0BAA0B,EAC1B,KAAK,6BAA6B,EAClC,uBAAuB,EACvB,KAAK,0BAA0B,EAC/B,wBAAwB,EACxB,KAAK,2BAA2B,EAChC,oBAAoB,EACpB,KAAK,uBAAuB,EAC5B,kBAAkB,EAClB,KAAK,qBAAqB,EAC1B,kBAAkB,EAClB,KAAK,qBAAqB,EAC1B,cAAc,EACd,KAAK,iBAAiB,EACtB,iBAAiB,EACjB,KAAK,oBAAoB,EACzB,mBAAmB,EACnB,KAAK,sBAAsB,EAC3B,kBAAkB,EAClB,KAAK,qBAAqB,EAC1B,mBAAmB,EACnB,KAAK,sBAAsB,EAC3B,gBAAgB,EAChB,KAAK,mBAAmB,EACxB,iBAAiB,EACjB,KAAK,oBAAoB,EACzB,0BAA0B,EAC1B,KAAK,6BAA6B,EAClC,qBAAqB,EACrB,KAAK,sBAAsB,EAC3B,qBAAqB,EACrB,KAAK,8BAA8B,EACnC,mBAAmB,EACnB,KA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package/dist/index.js

@@ -90,4 +90,8 @@ export { summarizeFunction, summarizeAllFunctions, summarizeModule, detectRole,
 export { analyzeSpecGap, parseSpecMd, } from './spec-gap/index.js';
 // CogniumConfig (cognium.config.json support)
 export { loadCogniumConfig, convertCogniumConfigToPassOptions, } from './config/cognium-config.js';
+// Cluster layer (cognium-ai#154, P4 of epic #155) — foundation only,
+// downstream wiring (meta.json schema, CLI flag, benchmark validation)
+// lands in follow-up tickets.
+export { clusterFiles, extractClusterVector, computeNormalization, euclideanCkDistance, jaccardDistance, mixedDistance, DEFAULT_CLUSTER_POLICY, } from './cluster/index.js';
 //# sourceMappingURL=index.js.map

package/dist/index.js.map

@@ -1 +1 @@
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package/dist/llm/batch-classifier.js

@@ -8,7 +8,7 @@
  * - Graceful degradation when LLM not configured
  */
 import PQueue from 'p-queue';
-import { getDefaultLLMConfig } from './config.js';
+import { getDefaultLLMConfig, getPhaseModelFingerprint } from './config.js';
 import { getAxLLMClient } from './ax-client.js';
 import { serializeToCGS } from './cgs-serializer.js';
 import { withLLMContext } from './debug-context.js';
@@ -24,21 +24,30 @@ export class BatchClassifier {
     circleIRResults;
     constructor(options = {}) {
         this.concurrency = options.concurrency ?? 5;
-        this.cache = getClassificationCache({ enabled: options.enableCache ?? true });
         this.useCGS = options.useCGS ?? true;
         this.circleIRResults = options.circleIRResults ?? new Map();
-        // Try to initialize LLM client
+        // Resolve config first so we can derive the per-phase model
+        // fingerprint and pass it into the classification cache (cognium-ai#151).
+        // Without the fingerprint dimension, switching `LLM_DISCOVERY_MODEL`
+        // between scans silently reused the previous model's results.
+        let modelFingerprint = '';
         try {
             const config = options.llmConfig
                 ? { ...getDefaultLLMConfig(), ...options.llmConfig }
                 : getDefaultLLMConfig();
+            modelFingerprint = getPhaseModelFingerprint(config);
             if (config.apiKey) {
                 this.llmClient = getAxLLMClient(config);
             }
         }
         catch {
-            // No LLM available
+            // No LLM available; fall through with empty fingerprint (legacy
+            // key shape) so any pre-existing on-disk entries still hit.
         }
+        this.cache = getClassificationCache({
+            enabled: options.enableCache ?? true,
+            modelFingerprint,
+        });
     }
     async classify(files, classifiers) {
         const classifications = [];

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package/dist/llm/call-logger.d.ts

@@ -69,6 +69,20 @@ export interface LLMCallEntry {
      * surface skip-rate metrics without a separate side-channel.
      */
     skippedByPrefilter?: boolean;
+    /**
+     * cognium-ai#152 — set on synthetic "no-call" entries emitted when the
+     * persistent verify cache served a batch verification result, so the JSONL
+     * analyzer can surface verify-hit rate alongside discovery skip-rate.
+     */
+    verifyCacheHit?: boolean;
+    /**
+     * cognium-ai#134 — set on synthetic "no-call" entries emitted when the
+     * persistent discovery cache served a per-method discovery result, so the
+     * JSONL analyzer can surface discovery-hit rate as a standalone signal
+     * (the 500× duplication pathology from the 2026-06-27 sweep would show up
+     * as a near-100% hit rate here).
+     */
+    discoveryCacheHit?: boolean;
 }
 declare class LLMCallLogger {
     private path;
@@ -88,6 +102,28 @@ declare class LLMCallLogger {
         phase: string;
         context?: LLMCallEntry['context'];
     }): void;
+    /**
+     * cognium-ai#152 — record a synthetic "no-call" entry when the persistent
+     * verify cache served the batch result. Mirrors `logSkip()` so the
+     * analyzer can compute verify-hit rate without a separate side-channel.
+     */
+    logVerifyCacheHit(meta: {
+        signature: string;
+        phase: string;
+        model?: string;
+        context?: LLMCallEntry['context'];
+    }): void;
+    /**
+     * cognium-ai#134 — record a synthetic "no-call" entry when the persistent
+     * discovery cache served a per-method result. Mirrors `logVerifyCacheHit()`
+     * so the analyzer can compute discovery-hit rate independently.
+     */
+    logDiscoveryCacheHit(meta: {
+        signature: string;
+        phase: string;
+        model?: string;
+        context?: LLMCallEntry['context'];
+    }): void;
     /**
      * Log a per-attempt entry (cognium-ai#87). Tagged `kind:'attempt'`. Writes
      * to the same JSONL stream as `log()` so the analyzer can correlate. Also

package/dist/llm/call-logger.d.ts.map

@@ -1 +1 @@
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package/dist/llm/call-logger.js

@@ -87,6 +87,42 @@ class LLMCallLogger {
             context: meta.context,
         });
     }
+    /**
+     * cognium-ai#152 — record a synthetic "no-call" entry when the persistent
+     * verify cache served the batch result. Mirrors `logSkip()` so the
+     * analyzer can compute verify-hit rate without a separate side-channel.
+     */
+    logVerifyCacheHit(meta) {
+        this.log({
+            signature: meta.signature,
+            phase: meta.phase,
+            model: meta.model,
+            promptChars: 0,
+            responseChars: 0,
+            durationMs: 0,
+            success: true,
+            verifyCacheHit: true,
+            context: meta.context,
+        });
+    }
+    /**
+     * cognium-ai#134 — record a synthetic "no-call" entry when the persistent
+     * discovery cache served a per-method result. Mirrors `logVerifyCacheHit()`
+     * so the analyzer can compute discovery-hit rate independently.
+     */
+    logDiscoveryCacheHit(meta) {
+        this.log({
+            signature: meta.signature,
+            phase: meta.phase,
+            model: meta.model,
+            promptChars: 0,
+            responseChars: 0,
+            durationMs: 0,
+            success: true,
+            discoveryCacheHit: true,
+            context: meta.context,
+        });
+    }
     /**
      * Log a per-attempt entry (cognium-ai#87). Tagged `kind:'attempt'`. Writes
      * to the same JSONL stream as `log()` so the analyzer can correlate. Also

package/dist/llm/call-logger.js.map

@@ -1 +1 @@
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package/dist/llm/discovery.d.ts

@@ -10,7 +10,7 @@
  * Expected impact: +15-25% on XSS and Command Injection benchmarks.
  */
 import { type AxLLMClient } from './ax-client.js';
-import type { LLMConfig } from './config.js';
+import { type LLMConfig } from './config.js';
 import type { CircleIR, Finding, SinkType } from 'circle-ir';
 /**
  * Result of LLM discovery for a single method

package/dist/llm/discovery.d.ts.map

@@ -1 +1 @@
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package/dist/llm/discovery.js

@@ -11,8 +11,11 @@
  */
 import { createHash } from 'node:crypto';
 import { getAxLLMClient } from './ax-client.js';
+import { getDefaultLLMConfig } from './config.js';
 import { anchorLineToIRSink } from './anchoring.js';
 import { withLLMContext } from './debug-context.js';
+import { getDiscoveryCache, computeDiscoveryCacheKey } from '../cache/discovery-cache.js';
+import { llmCallLogger } from './call-logger.js';
 // ============================================================================
 // CWE-Specific Discovery Prompts
 // ============================================================================
@@ -199,6 +202,31 @@ export class DiscoveryEngine {
     async analyzeMethod(method, targetCWEs, options, irSinks = []) {
         const methodId = `${method.className}.${method.methodName}`;
         const confidenceThreshold = options.confidenceThreshold ?? 0.6;
+        // cognium-ai#134 — persistent discovery cache. Serves identical
+        // (className, methodName, methodCode, sortedCweSet, model fingerprint)
+        // requests from disk so the 500× duplication pathology from the
+        // 2026-06-27 sweep (LLM-COST-SHARE-KEYCLOAK) becomes a free skip.
+        const persistentCacheEnabled = process.env.LLM_DISCOVERY_CACHE !== '0';
+        let dCache = null;
+        let dKey = null;
+        if (persistentCacheEnabled) {
+            dCache = getDiscoveryCache(getDefaultLLMConfig());
+            dKey = computeDiscoveryCacheKey({
+                className: method.className,
+                methodName: method.methodName,
+                methodCode: method.methodCode,
+                targetCWEs,
+            });
+            const cached = dCache.get(dKey.content, dKey.classifier);
+            if (cached) {
+                llmCallLogger.logDiscoveryCacheHit({
+                    signature: 'discoverInMethod',
+                    phase: 'discovery',
+                    context: { method: methodId, cwe: targetCWEs.join(',') },
+                });
+                return cached;
+            }
+        }
         // Build the discovery prompt
         const cweGuidance = targetCWEs
             .map(cwe => CWE_DISCOVERY_PROMPTS[cwe] || '')
@@ -306,6 +334,17 @@ If no vulnerability found, respond:
                     source: response.vulnerability.source,
                 };
             }
+            // cognium-ai#134 — populate persistent discovery cache on successful
+            // LLM call only. Early-return paths (LLM-null, low-confidence drop,
+            // catch block) are intentionally skipped so transient failures and
+            // threshold tweaks don't pollute the cache. Disk-write errors are
+            // swallowed — discovery never fails because the cache write failed.
+            if (dCache && dKey) {
+                try {
+                    dCache.set(dKey.content, dKey.classifier, result);
+                }
+                catch { }
+            }
             return result;
         }
         catch (error) {

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package/dist/llm/verification.d.ts

@@ -5,7 +5,7 @@
  * Analyzes real source code to determine TRUE_POSITIVE, FALSE_POSITIVE, or UNCERTAIN.
  */
 import { type AxLLMClient } from './ax-client.js';
-import type { LLMConfig } from './config.js';
+import { type LLMConfig } from './config.js';
 export declare const VERIFY_WINDOW_LINES: number;
 export declare const VERIFY_MAX_CHUNKS: number;
 export declare const VERIFY_MAX_PAIRS_PER_CHUNK: number;

package/dist/llm/verification.d.ts.map

@@ -1 +1 @@
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package/dist/llm/verification.js

@@ -6,7 +6,10 @@
  */
 import { createHash } from 'crypto';
 import { MAX_CODE_CONTEXT_LENGTH, getAxLLMClient, truncateCode, } from './ax-client.js';
+import { getDefaultLLMConfig } from './config.js';
 import { withLLMContext } from './debug-context.js';
+import { getVerifyCache, computeVerifyCacheKey } from '../cache/verify-cache.js';
+import { llmCallLogger } from './call-logger.js';
 // ============================================================================
 // #86 — Windowed verification configuration
 // ============================================================================
@@ -684,6 +687,29 @@ export async function verifyTaintPathsBatch(input, llmConfig) {
     if (process.env.LLM_VERIFIER_DEDUP === '0') {
         return engine.verifyBatch(input);
     }
+    // cognium-ai#152 — persistent cache layer in front of the in-memory
+    // dedup. Survives process restarts so identical (file SHA, pair-set,
+    // model fingerprint) requests don't re-spend LLM tokens across CI runs.
+    const persistentCacheEnabled = process.env.LLM_VERIFY_CACHE !== '0';
+    let cache = null;
+    let cacheKey = null;
+    if (persistentCacheEnabled) {
+        const effectiveConfig = llmConfig
+            ? { ...getDefaultLLMConfig(), ...llmConfig }
+            : getDefaultLLMConfig();
+        cache = getVerifyCache(effectiveConfig);
+        cacheKey = computeVerifyCacheKey(input);
+        const cached = cache.get(cacheKey.content, cacheKey.classifier);
+        if (cached) {
+            llmCallLogger.logVerifyCacheHit({
+                signature: 'verifyTaintPathsBatch',
+                phase: 'verification',
+                model: cached.modelUsed,
+                context: { file: input.filePath },
+            });
+            return cached;
+        }
+    }
     const key = _computeVerifierDedupKey(input);
     const existing = _verifierDedupCache.get(key);
     if (existing) {
@@ -699,6 +725,19 @@ export async function verifyTaintPathsBatch(input, llmConfig) {
     }
     const promise = engine.verifyBatch(input);
     _verifierDedupCache.set(key, { promise, hits: 0 });
+    // Populate the persistent cache on success; cache.set() is sync write.
+    if (cache && cacheKey) {
+        const writeCache = cache;
+        const writeKey = cacheKey;
+        promise.then((result) => {
+            try {
+                writeCache.set(writeKey.content, writeKey.classifier, result);
+            }
+            catch {
+                // Disk-full / permission errors must never fail verification.
+            }
+        }, () => { });
+    }
     // Evict on rejection so a transient error doesn't poison the cache for
     // the remainder of the process. Resolved Promises stay (cheap to re-await).
     promise.catch(() => {