circle-ir-ai 1.17.0 → 1.18.0

package/dist/agents/mastra/agents.d.ts

@@ -90,12 +90,12 @@ export declare const verificationAgent: Agent<"verification-agent", {
 export declare const crossFileAgent: Agent<"cross-file-agent", {
     crossFileTaint: import("@mastra/core/tools").Tool<{
         sourceCode: string;
+        targetFile: string;
         exportedTaint: {
             symbol: string;
             type: string;
             line: number;
         }[];
-        targetFile: string;
         sourceFile: string;
         targetCode: string;
         importedSymbols: string[];
@@ -178,12 +178,12 @@ export declare const orchestratorAgent: Agent<"orchestrator-agent", {
     }, unknown, unknown, import("@mastra/core/tools").ToolExecutionContext<unknown, unknown, unknown>, "verify-vulnerability", unknown>;
     crossFileTaint: import("@mastra/core/tools").Tool<{
         sourceCode: string;
+        targetFile: string;
         exportedTaint: {
             symbol: string;
             type: string;
             line: number;
         }[];
-        targetFile: string;
         sourceFile: string;
         targetCode: string;
         importedSymbols: string[];
@@ -266,12 +266,12 @@ export declare const agents: {
     crossFile: Agent<"cross-file-agent", {
         crossFileTaint: import("@mastra/core/tools").Tool<{
             sourceCode: string;
+            targetFile: string;
             exportedTaint: {
                 symbol: string;
                 type: string;
                 line: number;
             }[];
-            targetFile: string;
             sourceFile: string;
             targetCode: string;
             importedSymbols: string[];
@@ -349,12 +349,12 @@ export declare const agents: {
         }, unknown, unknown, import("@mastra/core/tools").ToolExecutionContext<unknown, unknown, unknown>, "verify-vulnerability", unknown>;
         crossFileTaint: import("@mastra/core/tools").Tool<{
             sourceCode: string;
+            targetFile: string;
             exportedTaint: {
                 symbol: string;
                 type: string;
                 line: number;
             }[];
-            targetFile: string;
             sourceFile: string;
             targetCode: string;
             importedSymbols: string[];

package/dist/agents/mastra/instance.d.ts

@@ -88,12 +88,12 @@ export declare function createMastraInstance(options?: MastraInstanceOptions): {
         crossFile: import("@mastra/core/agent").Agent<"cross-file-agent", {
             crossFileTaint: import("@mastra/core/tools").Tool<{
                 sourceCode: string;
+                targetFile: string;
                 exportedTaint: {
                     symbol: string;
                     type: string;
                     line: number;
                 }[];
-                targetFile: string;
                 sourceFile: string;
                 targetCode: string;
                 importedSymbols: string[];
@@ -171,12 +171,12 @@ export declare function createMastraInstance(options?: MastraInstanceOptions): {
             }, unknown, unknown, import("@mastra/core/tools").ToolExecutionContext<unknown, unknown, unknown>, "verify-vulnerability", unknown>;
             crossFileTaint: import("@mastra/core/tools").Tool<{
                 sourceCode: string;
+                targetFile: string;
                 exportedTaint: {
                     symbol: string;
                     type: string;
                     line: number;
                 }[];
-                targetFile: string;
                 sourceFile: string;
                 targetCode: string;
                 importedSymbols: string[];
@@ -260,12 +260,12 @@ export declare function createMastraInstance(options?: MastraInstanceOptions): {
         crossFile: import("@mastra/core/agent").Agent<"cross-file-agent", {
             crossFileTaint: import("@mastra/core/tools").Tool<{
                 sourceCode: string;
+                targetFile: string;
                 exportedTaint: {
                     symbol: string;
                     type: string;
                     line: number;
                 }[];
-                targetFile: string;
                 sourceFile: string;
                 targetCode: string;
                 importedSymbols: string[];
@@ -343,12 +343,12 @@ export declare function createMastraInstance(options?: MastraInstanceOptions): {
             }, unknown, unknown, import("@mastra/core/tools").ToolExecutionContext<unknown, unknown, unknown>, "verify-vulnerability", unknown>;
             crossFileTaint: import("@mastra/core/tools").Tool<{
                 sourceCode: string;
+                targetFile: string;
                 exportedTaint: {
                     symbol: string;
                     type: string;
                     line: number;
                 }[];
-                targetFile: string;
                 sourceFile: string;
                 targetCode: string;
                 importedSymbols: string[];

package/dist/cli/args.d.ts

@@ -41,6 +41,12 @@ export interface CliArgs {
     specOverwrite: boolean;
     specSkip: boolean;
     specNoBackup: boolean;
+    specDesign: boolean;
+    specPrinciples: boolean;
+    specTasks: boolean;
+    specDesignLLM: boolean;
+    specPrinciplesLLM: boolean;
+    specTasksLLM: boolean;
     specDir: string | null;
     crossArtifact?: boolean;
     verification?: boolean;

package/dist/cli/args.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"args.d.ts","sourceRoot":"","sources":["../../src/cli/args.ts"],"names":[],"mappings":"AAAA;;GAEG;AAEH,MAAM,MAAM,YAAY,GAAG,MAAM,GAAG,SAAS,GAAG,OAAO,GAAG,UAAU,GAAG,KAAK,CAAC;AAC7E,MAAM,MAAM,OAAO,GAAG,SAAS,GAAG,WAAW,GAAG,MAAM,GAAG,QAAQ,GAAG,SAAS,GAAG,WAAW,GAAG,eAAe,GAAG,eAAe,GAAG,SAAS,GAAG,OAAO,GAAG,SAAS,GAAG,SAAS,GAAG,YAAY,GAAG,WAAW,GAAG,SAAS,CAAC;AACvN,MAAM,MAAM,QAAQ,GAAG,OAAO,GAAG,OAAO,GAAG,MAAM,GAAG,MAAM,GAAG,OAAO,GAAG,QAAQ,CAAC;AAEhF,MAAM,MAAM,UAAU,GAAG,QAAQ,GAAG,QAAQ,GAAG,WAAW,GAAG,iBAAiB,GAAG,aAAa,CAAC;AAE/F,MAAM,WAAW,OAAO;IACtB,OAAO,EAAE,OAAO,CAAC;IACjB,IAAI,EAAE,MAAM,GAAG,IAAI,CAAC;IACpB,SAAS,EAAE,MAAM,GAAG,IAAI,CAAC;IACzB,MAAM,EAAE,YAAY,CAAC;IACrB,MAAM,EAAE,MAAM,GAAG,IAAI,CAAC;IACtB,MAAM,EAAE,MAAM,GAAG,IAAI,CAAC;IACtB,OAAO,EAAE,MAAM,EAAE,CAAC;IAClB,OAAO,EAAE,MAAM,EAAE,CAAC;IAClB,QAAQ,EAAE,OAAO,CAAC;IAClB,KAAK,EAAE,OAAO,CAAC;IACf,IAAI,EAAE,OAAO,CAAC;IACd,OAAO,EAAE,OAAO,CAAC;IACjB,QAAQ,EAAE,QAAQ,GAAG,IAAI,CAAC;IAE1B,gBAAgB,EAAE,OAAO,CAAC;IAC1B,gBAAgB,EAAE,MAAM,CAAC;IAEzB,SAAS,EAAE,OAAO,CAAC;IACnB,SAAS,EAAE,OAAO,CAAC;IACnB,UAAU,EAAE,MAAM,GAAG,IAAI,CAAC;IAC1B,SAAS,EAAE,MAAM,GAAG,IAAI,CAAC;IACzB,QAAQ,EAAE,MAAM,GAAG,IAAI,CAAC;IAExB,OAAO,EAAE,MAAM,CAAC;IAEhB,MAAM,EAAE,UAAU,GAAG,IAAI,CAAC;IAE1B,eAAe,EAAE,MAAM,GAAG,IAAI,CAAC;IAC/B,KAAK,EAAE,MAAM,GAAG,IAAI,CAAC;IACrB,UAAU,EAAE,MAAM,EAAE,CAAC;IACrB,QAAQ,EAAE,MAAM,GAAG,IAAI,CAAC;IAExB,KAAK,EAAE,OAAO,CAAC;IACf,QAAQ,EAAE,MAAM,GAAG,IAAI,CAAC;IACxB,UAAU,EAAE,OAAO,CAAC;IAEpB,YAAY,EAAE,MAAM,GAAG,IAAI,CAAC;IAC5B,eAAe,EAAE,OAAO,CAAC;IAEzB,SAAS,EAAE,MAAM,GAAG,IAAI,CAAC;IACzB,aAAa,EAAE,OAAO,CAAC;IACvB,QAAQ,EAAE,OAAO,CAAC;IAClB,YAAY,EAAE,OAAO,CAAC;IACtB,UAAU,EAAE,OAAO,CAAC;IACpB,cAAc,EAAE,OAAO,CAAC;IACxB,SAAS,EAAE,OAAO,CAAC;IACnB,aAAa,EAAE,OAAO,CAAC;IACvB,iBAAiB,EAAE,OAAO,CAAC;IAC3B,YAAY,EAAE,OAAO,CAAC;IAEtB,OAAO,EAAE,MAAM,GAAG,IAAI,CAAC;IAEvB,aAAa,CAAC,EAAE,OAAO,CAAC;IACxB,YAAY,CAAC,EAAE,OAAO,CAAC;IACvB,aAAa,CAAC,EAAE,MAAM,CAAC;IACvB,WAAW,CAAC,EAAE,UAAU,GAAG,MAAM,GAAG,QAAQ,GAAG,KAAK,GAAG,MAAM,CAAC;IAE9D,WAAW,EAAE,MAAM,EAAE,CAAC;CACvB;AAED;;GAEG;AACH,wBAAgB,SAAS,CAAC,IAAI,EAAE,MAAM,EAAE,GAAG,OAAO,CAuiBjD"}

package/dist/cli/args.js

@@ -41,6 +41,12 @@ export function parseArgs(argv) {
         specOverwrite: false,
         specSkip: false,
         specNoBackup: false,
+        specDesign: false,
+        specPrinciples: false,
+        specTasks: false,
+        specDesignLLM: false,
+        specPrinciplesLLM: false,
+        specTasksLLM: false,
         specDir: null,
         disablePass: [],
     };
@@ -307,6 +313,33 @@ export function parseArgs(argv) {
             case '--spec-no-backup':
                 args.specNoBackup = true;
                 break;
+            case '--design':
+                args.specDesign = true;
+                break;
+            case '--principles':
+                args.specPrinciples = true;
+                break;
+            case '--tasks':
+                args.specTasks = true;
+                break;
+            case '--design-llm':
+                args.specDesignLLM = true;
+                args.specDesign = true; // Implied
+                break;
+            case '--principles-llm':
+                args.specPrinciplesLLM = true;
+                args.specPrinciples = true; // Implied
+                break;
+            case '--tasks-llm':
+                args.specTasksLLM = true;
+                args.specTasks = true; // Implied
+                break;
+            case '--all':
+                // Generate all outputs (design + principles + tasks)
+                args.specDesign = true;
+                args.specPrinciples = true;
+                args.specTasks = true;
+                break;
             case '--spec':
                 i++;
                 if (i >= argv.length) {
@@ -445,6 +478,32 @@ export function parseArgs(argv) {
                 else if (arg === '--spec-no-backup') {
                     args.specNoBackup = true;
                 }
+                else if (arg === '--design') {
+                    args.specDesign = true;
+                }
+                else if (arg === '--principles') {
+                    args.specPrinciples = true;
+                }
+                else if (arg === '--tasks') {
+                    args.specTasks = true;
+                }
+                else if (arg === '--design-llm') {
+                    args.specDesignLLM = true;
+                    args.specDesign = true;
+                }
+                else if (arg === '--principles-llm') {
+                    args.specPrinciplesLLM = true;
+                    args.specPrinciples = true;
+                }
+                else if (arg === '--tasks-llm') {
+                    args.specTasksLLM = true;
+                    args.specTasks = true;
+                }
+                else if (arg === '--all') {
+                    args.specDesign = true;
+                    args.specPrinciples = true;
+                    args.specTasks = true;
+                }
                 else if (arg.startsWith('--spec=')) {
                     args.specDir = arg.substring(7);
                 }

package/dist/cli/args.js.map

@@ -1 +1 @@
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package/dist/cli/commands/generate-spec.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"generate-spec.d.ts","sourceRoot":"","sources":["../../../src/cli/commands/generate-spec.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAWH,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,YAAY,CAAC;AAE1C;;GAEG;AACH,wBAAsB,mBAAmB,CAAC,IAAI,EAAE,OAAO,GAAG,OAAO,CAAC,MAAM,CAAC,CAiFxE"}
+{"version":3,"file":"generate-spec.d.ts","sourceRoot":"","sources":["../../../src/cli/commands/generate-spec.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAWH,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,YAAY,CAAC;AAE1C;;GAEG;AACH,wBAAsB,mBAAmB,CAAC,IAAI,EAAE,OAAO,GAAG,OAAO,CAAC,MAAM,CAAC,CAkGxE"}

package/dist/cli/commands/generate-spec.js

@@ -28,6 +28,13 @@ export async function executeGenerateSpec(args) {
         specModel: args.specModel || 'cognium/gpt-oss-120b',
         overwrite: args.specOverwrite,
         quiet: args.quiet,
+        // S2 Phase 2-3 options
+        generateDesign: args.specDesign,
+        generatePrinciples: args.specPrinciples,
+        generateTasks: args.specTasks,
+        enableDesignLLM: args.specDesignLLM,
+        enablePrinciplesLLM: args.specPrinciplesLLM,
+        enableTasksLLM: args.specTasksLLM,
     };
     // Initialize WASM analyzer
     await initAnalyzer();
@@ -40,6 +47,17 @@ export async function executeGenerateSpec(args) {
                 for (const result of results) {
                     console.error(`  - ${result.featureName}: ${result.outputPath}/spec.md`);
                 }
+                // Show additional generated files
+                const extras = [];
+                if (args.specDesign)
+                    extras.push('design.md');
+                if (args.specPrinciples)
+                    extras.push('principles.md');
+                if (args.specTasks)
+                    extras.push('tasks.md');
+                if (extras.length > 0) {
+                    console.error(`  + Project-level: ${extras.join(', ')}`);
+                }
                 console.error('');
                 console.error('Review required: specifications were automatically generated.');
             }

package/dist/cli/commands/generate-spec.js.map

@@ -1 +1 @@
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package/dist/specifica/confidence.d.ts

@@ -0,0 +1,130 @@
+/**
+ * Confidence Tier System
+ *
+ * Three-tier confidence system for generated Specifica content:
+ * - verified: Graph-proven fact, no LLM judgment involved
+ * - corroborated: Multiple independent signals agree
+ * - suggested: LLM inference, requires architect confirmation
+ *
+ * Based on Code-to-Spec Framework v1.1 §4
+ */
+export type ConfidenceTier = 'verified' | 'corroborated' | 'suggested';
+export interface ConfidenceAnnotated<T> {
+    value: T;
+    confidence: ConfidenceTier;
+    reason?: string;
+}
+export interface ConfidenceStats {
+    verified: number;
+    corroborated: number;
+    suggested: number;
+}
+/**
+ * Compare two confidence tiers.
+ * Returns positive if a > b, negative if a < b, 0 if equal.
+ */
+export declare function compareTiers(a: ConfidenceTier, b: ConfidenceTier): number;
+/**
+ * Return the lower of two confidence tiers.
+ * Confidence can only degrade upward through reduction.
+ */
+export declare function minTier(a: ConfidenceTier, b: ConfidenceTier): ConfidenceTier;
+/**
+ * Return the higher of two confidence tiers.
+ */
+export declare function maxTier(a: ConfidenceTier, b: ConfidenceTier): ConfidenceTier;
+/**
+ * Aggregate confidence across multiple items.
+ * A component built from mixed confidence items gets the minimum tier.
+ *
+ * Rule: Within a single channel, confidence can only degrade upward.
+ */
+export declare function aggregateConfidence(tiers: ConfidenceTier[]): ConfidenceTier;
+/**
+ * Apply cross-channel corroboration.
+ * When both vertical and horizontal channels independently agree,
+ * confidence can upgrade ONE tier (but never to verified).
+ *
+ * Rule: Cross-channel corroboration can upgrade suggested → corroborated,
+ * but never corroborated → verified. Verified is reserved for graph-proven facts.
+ */
+export declare function applyCorroboration(verticalTier: ConfidenceTier, horizontalTier: ConfidenceTier): ConfidenceTier;
+/**
+ * Determine confidence tier based on evidence count.
+ * Used for pattern detection where repetition implies intention.
+ */
+export declare function confidenceFromCount(count: number, total: number, thresholds?: {
+    verified: number;
+    corroborated: number;
+}): ConfidenceTier;
+/**
+ * Format a confidence-annotated item as markdown.
+ *
+ * Example output:
+ *   [verified] Order has 4 schema projections with 3 excluded fields at the API boundary.
+ *   [corroborated] All service methods use structured error logging (38/38 instances).
+ *   [suggested] This component appears to handle payment reconciliation.
+ */
+export declare function formatAnnotation<T>(item: ConfidenceAnnotated<T>, formatter?: (value: T) => string): string;
+/**
+ * Format multiple annotated items as a markdown list.
+ */
+export declare function formatAnnotatedList<T>(items: ConfidenceAnnotated<T>[], formatter?: (value: T) => string): string;
+/**
+ * Create a confidence-annotated item.
+ */
+export declare function annotate<T>(value: T, confidence: ConfidenceTier, reason?: string): ConfidenceAnnotated<T>;
+/**
+ * Create a verified annotation (graph-proven fact).
+ */
+export declare function verified<T>(value: T, reason?: string): ConfidenceAnnotated<T>;
+/**
+ * Create a corroborated annotation (multiple signals agree).
+ */
+export declare function corroborated<T>(value: T, reason?: string): ConfidenceAnnotated<T>;
+/**
+ * Create a suggested annotation (LLM inference).
+ */
+export declare function suggested<T>(value: T, reason?: string): ConfidenceAnnotated<T>;
+/**
+ * Count items by confidence tier.
+ */
+export declare function countByTier<T>(items: ConfidenceAnnotated<T>[]): ConfidenceStats;
+/**
+ * Calculate total items from stats.
+ */
+export declare function totalFromStats(stats: ConfidenceStats): number;
+/**
+ * Generate YAML frontmatter for a Specifica file.
+ *
+ * Example output:
+ * ---
+ * generated_by: cognium spec-gen
+ * source: ./src
+ * verified: 4
+ * corroborated: 12
+ * suggested: 6
+ * ---
+ */
+export declare function generateFrontmatter(source: string, stats: ConfidenceStats, extras?: Record<string, string | number | boolean>): string;
+/**
+ * Determine the confidence ceiling for schema extraction based on language.
+ *
+ * Per §4: TypeScript, Java, Rust → verified (type hierarchy graph)
+ *         JavaScript, Python with hints → corroborated
+ *         Untyped JavaScript/Python → corroborated (shape reconstruction)
+ */
+export declare function schemaConfidenceCeiling(language: string, hasTypeHints?: boolean): ConfidenceTier;
+/**
+ * Determine confidence for infrastructure classification based on fan-in.
+ *
+ * Per §7:
+ *   10+ unrelated callers → verified infrastructure
+ *   3-9 unrelated callers → LLM classification → corroborated
+ *   1-2 callers → verified domain edge
+ */
+export declare function fanInConfidence(fanIn: number): {
+    classification: 'infrastructure' | 'domain' | 'borderline';
+    confidence: ConfidenceTier;
+};
+//# sourceMappingURL=confidence.d.ts.map

package/dist/specifica/confidence.d.ts.map

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