chiasmus 0.1.15 → 0.1.16

package/README.md

@@ -122,9 +122,24 @@ chiasmus_graph files=["main.go", "handler.go"] analysis="impact" target="Query"
 → { analysis: "impact", result: ["Handle", "main"] }
 ```
 
-Analyses: `summary`, `callers`, `callees`, `reachability`, `dead-code`, `cycles`, `path`, `impact`, `facts`.
+Analyses: `summary`, `callers`, `callees`, `reachability`, `dead-code`, `cycles`, `path`, `impact`, `layer-violation`, `communities`, `hubs`, `bridges`, `surprises`, `diff`, `entry-points`, `facts`.
 
-Reachability-heavy analyses (`cycles`, `reachability`, `path`, `impact`, `dead-code`, `callers`, `callees`) run on native O(V+E) graph algorithms and scale to codebases with thousands of functions. The `facts` analysis still emits raw Prolog for use with `chiasmus_verify`, capped at 10 MB — above that limit the result is `{ error, size, limit }` rather than a program string, so narrow the file set or call a specific analysis directly.
+Reachability-heavy analyses (`cycles`, `reachability`, `path`, `impact`, `dead-code`, `callers`, `callees`) run on native O(V+E) graph algorithms and scale to codebases with thousands of functions. `communities` uses Louvain; `bridges` uses exact betweenness centrality. The `facts` analysis emits raw Prolog for use with `chiasmus_verify`, capped at 10 MB — above that limit the result is `{ error, size, limit }` rather than a program string, so narrow the file set or call a specific analysis directly. Opt in to `include_insights=true` on `facts` to also emit `community/2`, `cohesion/2`, `hub/2`, `bridge/2` predicates.
+
+### Persistent cache and PR diff
+
+Pass `cache=true` on `chiasmus_graph` to enable a per-file content-hash cache — unchanged files skip re-parsing across calls. On a 42-file TypeScript repo, warm hits run at ~2.5ms vs ~170ms cold (60× speedup). Cache lives under `$CHIASMUS_CACHE_DIR` (default `~/.cache/chiasmus`) with an LRU budget per repo.
+
+```
+chiasmus_graph files=[...] analysis="summary" cache=true save_snapshot="main"
+→ extracts + saves the current graph as the "main" baseline
+
+# After branch changes:
+chiasmus_graph files=[...] analysis="diff" against="main" cache=true
+→ { addedNodes, removedNodes, addedEdges, removedEdges, summary }
+```
+
+`chiasmus_review` accepts `delta_against="<snapshot>"` — when set, a phase 0 diffs against the snapshot, impact-checks removed symbols, and scopes later phases to what the PR actually changed.
 
 **`chiasmus_skills`** — Search the template library. Ships with 8 starter templates covering authorization, configuration, dependency resolution, validation, rule inference, and graph reachability. By-name lookups include related template suggestions.
 
@@ -174,7 +189,7 @@ Each action carries an `interpret` field describing how to score the result. Aft
 
 ## Recommended Workflow
 
-The calling LLM (Claude, GPT, etc.) drives the process — no API key needed:
+The calling LLM (GLM, GPT, etc.) drives the process — no API key needed:
 
 1. `chiasmus_formalize problem="Can our RBAC rules ever conflict?"` → get template + slot instructions
 2. Fill the template slots using your knowledge of the user's codebase
@@ -383,7 +398,7 @@ library.close();
 |---------|---------|
 | `chiasmus` | All public APIs (barrel export) |
 | `chiasmus/solvers` | `SolverSession`, `createZ3Solver`, `createPrologSolver`, `correctionLoop`, solver types |
-| `chiasmus/graph` | `extractGraph`, `runAnalysis`, `runAnalysisFromGraph`, `buildFactsResult`, `DEFAULT_FACTS_MAX_BYTES`, `parseMermaid`, `graphToProlog`, adapter registry, graph types |
+| `chiasmus/graph` | `extractGraph`, `runAnalysis`, `runAnalysisFromGraph`, `buildFactsResult`, `graphToProlog`, `parseMermaid`, `detectCommunities`, `detectHubs`, `detectBridges`, `detectSurprisingConnections`, `detectEntryPoints`, `graphDiff`, `saveSnapshot`/`loadSnapshot`/`listSnapshots`, cache APIs, adapter registry, graph types |
 | `chiasmus/formalize` | `lintSpec`, `classifyFeedback`, `extractPrologQuery`, `FormalizationEngine`, result types |
 | `chiasmus/skills` | `SkillLibrary`, `SkillLearner`, `craftTemplate`, `validateTemplate`, skill types |
 | `chiasmus/llm` | `createLLMFromEnv`, `AnthropicAdapter`, `OpenAICompatibleAdapter`, LLM types |
@@ -394,6 +409,8 @@ library.close();
 | Variable | Default | Purpose |
 |----------|---------|---------|
 | `CHIASMUS_HOME` | `~/.chiasmus/` | Database, skill storage, and config |
+| `CHIASMUS_CACHE_DIR` | `~/.cache/chiasmus` | Per-file extraction cache + graph snapshots (when `cache=true`) |
+| `CHIASMUS_CACHE_MAX_PER_REPO` | `67108864` (64 MB) | Per-repo cache byte budget — LRU eviction above this |
 | `ANTHROPIC_API_KEY` | — | Optional: Anthropic provider for autonomous mode |
 | `DEEPSEEK_API_KEY` | — | Optional: DeepSeek provider for autonomous mode |
 | `OPENAI_API_KEY` | — | Optional: OpenAI provider for autonomous mode |

package/dist/graph/analyses.d.ts

@@ -1,3 +1,4 @@
+import { type CacheOptions } from "./cache.js";
 import type { CodeGraph } from "./types.js";
 /**
  * Maximum byte size of a `facts` analysis response. Above this the Prolog
@@ -19,14 +20,36 @@ export interface FactsOversizeError {
  * callers (and the MCP transport) can surface a clear failure instead of
  * timing out mid-serialize.
  */
-export declare function buildFactsResult(graph: CodeGraph, entryPoints: string[] | undefined, maxBytes?: number): string | FactsOversizeError;
-export type AnalysisType = "summary" | "callers" | "callees" | "reachability" | "dead-code" | "cycles" | "path" | "impact" | "facts" | "layer-violation";
+export declare function buildFactsResult(graph: CodeGraph, entryPoints: string[] | undefined, maxBytes?: number, prologOpts?: {
+    includeInsights?: boolean;
+}): string | FactsOversizeError;
+export type AnalysisType = "summary" | "callers" | "callees" | "reachability" | "dead-code" | "cycles" | "path" | "impact" | "facts" | "layer-violation" | "communities" | "hubs" | "bridges" | "surprises" | "diff" | "entry-points";
 export interface AnalysisRequest {
     analysis: AnalysisType;
     target?: string;
     from?: string;
     to?: string;
     entryPoints?: string[];
+    /** Snapshot name to diff against (required when analysis="diff"). */
+    against?: string;
+    /**
+     * When set, the extracted graph is saved under this snapshot name after
+     * analysis completes. Useful for capturing a baseline ("main") that a
+     * later `diff` call can compare against.
+     */
+    saveSnapshot?: string;
+    /**
+     * For analysis="facts" only: also emit community/2, cohesion/2, hub/2,
+     * bridge/2 facts alongside the base fact set. Off by default since these
+     * add O(V+E) work and bloat the fact dump.
+     */
+    includeInsights?: boolean;
+    /**
+     * Enable persistent per-file extraction cache. Supply an object (with
+     * optional cacheDir/repoKey/budget overrides) to opt in. Omit or pass
+     * undefined to extract fresh every call.
+     */
+    cache?: CacheOptions;
 }
 export interface AnalysisResult {
     analysis: AnalysisType;

package/dist/graph/analyses.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"analyses.d.ts","sourceRoot":"","sources":["../../src/graph/analyses.ts"],"names":[],"mappings":"AAGA,OAAO,EAA8B,KAAK,YAAY,EAAE,MAAM,YAAY,CAAC;AAc3E,OAAO,KAAK,EAAE,SAAS,EAAE,MAAM,YAAY,CAAC;AAI5C;;;;;;GAMG;AACH,eAAO,MAAM,uBAAuB,QAAmB,CAAC;AAExD,wEAAwE;AACxE,MAAM,WAAW,kBAAkB;IACjC,KAAK,EAAE,MAAM,CAAC;IACd,IAAI,EAAE,MAAM,CAAC;IACb,KAAK,EAAE,MAAM,CAAC;CACf;AAED;;;;;GAKG;AACH,wBAAgB,gBAAgB,CAC9B,KAAK,EAAE,SAAS,EAChB,WAAW,EAAE,MAAM,EAAE,GAAG,SAAS,EACjC,QAAQ,GAAE,MAAgC,EAC1C,UAAU,CAAC,EAAE;IAAE,eAAe,CAAC,EAAE,OAAO,CAAA;CAAE,GACzC,MAAM,GAAG,kBAAkB,CAa7B;AAED,MAAM,MAAM,YAAY,GACpB,SAAS,GAAG,SAAS,GAAG,SAAS,GAAG,cAAc,GAClD,WAAW,GAAG,QAAQ,GAAG,MAAM,GAAG,QAAQ,GAAG,OAAO,GACpD,iBAAiB,GACjB,aAAa,GAAG,MAAM,GAAG,SAAS,GAAG,WAAW,GAChD,MAAM,GAAG,cAAc,CAAC;AAE5B,MAAM,WAAW,eAAe;IAC9B,QAAQ,EAAE,YAAY,CAAC;IACvB,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,EAAE,CAAC,EAAE,MAAM,CAAC;IACZ,WAAW,CAAC,EAAE,MAAM,EAAE,CAAC;IACvB,qEAAqE;IACrE,OAAO,CAAC,EAAE,MAAM,CAAC;IACjB;;;;OAIG;IACH,YAAY,CAAC,EAAE,MAAM,CAAC;IACtB;;;;OAIG;IACH,eAAe,CAAC,EAAE,OAAO,CAAC;IAC1B;;;;OAIG;IACH,KAAK,CAAC,EAAE,YAAY,CAAC;CACtB;AAED,MAAM,WAAW,cAAc;IAC7B,QAAQ,EAAE,YAAY,CAAC;IACvB,MAAM,EAAE,OAAO,CAAC;IAChB,gGAAgG;IAChG,QAAQ,CAAC,EAAE,MAAM,EAAE,CAAC;CACrB;AAED,qDAAqD;AACrD,wBAAsB,WAAW,CAC/B,SAAS,EAAE,MAAM,EAAE,EACnB,OAAO,EAAE,eAAe,GACvB,OAAO,CAAC,cAAc,CAAC,CAqEzB;AAED,yEAAyE;AACzE,wBAAsB,oBAAoB,CACxC,KAAK,EAAE,SAAS,EAChB,OAAO,EAAE,eAAe,GACvB,OAAO,CAAC,cAAc,CAAC,CAEzB"}

package/dist/graph/analyses.js

@@ -1,6 +1,11 @@
 import { readFileSync, statSync } from "node:fs";
 import { extractGraph } from "./extractor.js";
 import { graphToProlog } from "./facts.js";
+import { loadSnapshot, saveSnapshot } from "./cache.js";
+import { detectCommunities } from "./community.js";
+import { detectHubs, detectBridges, detectSurprisingConnections } from "./insights.js";
+import { graphDiff } from "./diff.js";
+import { detectEntryPoints } from "./entry-points.js";
 import { cycles as nativeCycles, reachability as nativeReachability, path as nativePath, impact as nativeImpact, deadCode as nativeDeadCode, callers as nativeCallers, callees as nativeCallees, } from "./native-analyses.js";
 const MAX_FILE_SIZE = 10 * 1024 * 1024; // 10MB
 /**
@@ -17,8 +22,8 @@ export const DEFAULT_FACTS_MAX_BYTES = 10 * 1024 * 1024;
  * callers (and the MCP transport) can surface a clear failure instead of
  * timing out mid-serialize.
  */
-export function buildFactsResult(graph, entryPoints, maxBytes = DEFAULT_FACTS_MAX_BYTES) {
-    const program = graphToProlog(graph, entryPoints);
+export function buildFactsResult(graph, entryPoints, maxBytes = DEFAULT_FACTS_MAX_BYTES, prologOpts) {
+    const program = graphToProlog(graph, entryPoints, prologOpts);
     if (program.length > maxBytes) {
         return {
             error: `Prolog fact dump is ${program.length} bytes, exceeds the ${maxBytes} byte cap. ` +
@@ -59,7 +64,36 @@ export async function runAnalysis(filePaths, request) {
             warnings,
         };
     }
-    const graph = await extractGraph(files);
+    // Guard: if the caller both saves AND diffs against the same snapshot
+    // name, the save would clobber the baseline before the diff runs,
+    // producing a silent "no changes" result. Reject explicitly.
+    if (request.saveSnapshot &&
+        request.analysis === "diff" &&
+        request.against === request.saveSnapshot) {
+        return {
+            analysis: request.analysis,
+            result: {
+                error: `saveSnapshot and against cannot name the same snapshot ('${request.saveSnapshot}') — ` +
+                    "the save would overwrite the baseline before the diff runs. " +
+                    "Use distinct names (e.g. save_snapshot='feature-branch', against='main').",
+            },
+            warnings: warnings.length > 0 ? warnings : undefined,
+        };
+    }
+    const graph = await extractGraph(files, request.cache ? { cache: request.cache } : {});
+    if (request.saveSnapshot) {
+        if (!request.cache) {
+            warnings.push("saveSnapshot ignored: cache option is required to persist snapshots");
+        }
+        else {
+            try {
+                await saveSnapshot(request.saveSnapshot, graph, request.cache);
+            }
+            catch (e) {
+                warnings.push(`Failed to save snapshot ${request.saveSnapshot}: ${e instanceof Error ? e.message : String(e)}`);
+            }
+        }
+    }
     const base = await runOnGraph(graph, request);
     return warnings.length > 0 ? { ...base, warnings } : base;
 }
@@ -78,7 +112,12 @@ export async function runAnalysisFromGraph(graph, request) {
 async function runOnGraph(graph, request) {
     switch (request.analysis) {
         case "facts":
-            return { analysis: "facts", result: buildFactsResult(graph, request.entryPoints) };
+            return {
+                analysis: "facts",
+                result: buildFactsResult(graph, request.entryPoints, DEFAULT_FACTS_MAX_BYTES, {
+                    includeInsights: request.includeInsights ?? false,
+                }),
+            };
         case "summary":
             return { analysis: "summary", result: buildSummary(graph) };
         case "layer-violation":
@@ -110,6 +149,29 @@ async function runOnGraph(graph, request) {
             if (!request.target)
                 return missingParams("impact");
             return { analysis: "impact", result: nativeImpact(graph, request.target) };
+        case "communities":
+            return { analysis: "communities", result: detectCommunities(graph) };
+        case "hubs":
+            return { analysis: "hubs", result: detectHubs(graph) };
+        case "bridges":
+            return { analysis: "bridges", result: detectBridges(graph) };
+        case "surprises":
+            return { analysis: "surprises", result: detectSurprisingConnections(graph) };
+        case "entry-points":
+            return { analysis: "entry-points", result: detectEntryPoints(graph) };
+        case "diff": {
+            if (!request.against) {
+                return { analysis: "diff", result: { error: "Missing required parameter 'against' — specify a snapshot name to diff against" } };
+            }
+            if (!request.cache) {
+                return { analysis: "diff", result: { error: "diff requires a cache option so snapshots can be located on disk" } };
+            }
+            const baseline = await loadSnapshot(request.against, request.cache);
+            if (!baseline) {
+                return { analysis: "diff", result: { error: `Snapshot '${request.against}' not found. Save one first via saveSnapshot.` } };
+            }
+            return { analysis: "diff", result: graphDiff(baseline, graph) };
+        }
         default:
             return { analysis: request.analysis, result: { error: `Unknown analysis: ${request.analysis}` } };
     }
@@ -167,7 +229,7 @@ function buildSummary(graph) {
     const files = new Set(graph.defines.map((d) => d.file));
     const functions = graph.defines.filter((d) => d.kind === "function" || d.kind === "method").length;
     const classes = graph.defines.filter((d) => d.kind === "class").length;
-    return {
+    const summary = {
         files: files.size,
         functions,
         classes,
@@ -175,5 +237,9 @@ function buildSummary(graph) {
         imports: graph.imports.length,
         exports: graph.exports.length,
     };
+    if (graph.hyperedges && graph.hyperedges.length > 0) {
+        summary.hyperedges = graph.hyperedges.length;
+    }
+    return summary;
 }
 //# sourceMappingURL=analyses.js.map

package/dist/graph/analyses.js.map

@@ -1 +1 @@
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package/dist/graph/cache.d.ts

@@ -0,0 +1,72 @@
+/**
+ * On-disk cache for per-file CodeGraph extraction results.
+ *
+ * Layout:
+ *   <cacheDir>/<repoKey>/
+ *     .lock                 proper-lockfile target
+ *     manifest.json         { schemaVersion, entries: {absPath: {hash, size, savedAt}} }
+ *     files/<hash>.json     one serialized CodeGraph fragment per cached file
+ *     snapshots/<name>.json full serialized graph at a point in time
+ *
+ * All manifest read-modify-write sequences serialize through `withRepoLock`.
+ * Readers tolerate a racing eviction by treating a missing file as a miss.
+ * LRU is tracked via file mtime: `utimes` bumps the entry on every hit, and
+ * eviction sorts oldest-first.
+ */
+import type { CodeGraph } from "./types.js";
+export declare const CACHE_SCHEMA_VERSION = "1";
+export interface CacheOptions {
+    /** Root cache directory. Defaults to $CHIASMUS_CACHE_DIR or ~/.cache/chiasmus. */
+    cacheDir?: string;
+    /** Identifier for a specific repository/project. Defaults to "default". */
+    repoKey?: string;
+    /**
+     * Per-repo byte budget. Defaults to $CHIASMUS_CACHE_MAX_PER_REPO or 64 MB.
+     */
+    maxBytesPerRepo?: number;
+}
+export interface CachePaths {
+    cacheDir: string;
+    repoDir: string;
+    filesDir: string;
+    manifestPath: string;
+    lockPath: string;
+}
+/** Deterministic repoKey derived from a working directory — safe across sessions. */
+export declare function defaultRepoKey(cwd?: string): string;
+export declare function resolveCachePaths(opts?: CacheOptions): CachePaths;
+/**
+ * Per-file content hash. The path suffix prevents two distinct files with
+ * identical content from colliding.
+ */
+export declare function fileHash(content: string, absPath: string): string;
+export declare function checkFileCache(files: Array<{
+    path: string;
+    content: string;
+}>, opts?: CacheOptions): Promise<{
+    hits: Array<{
+        path: string;
+        graph: CodeGraph;
+    }>;
+    misses: Array<{
+        path: string;
+        content: string;
+    }>;
+}>;
+export declare function saveFileCache(items: Array<{
+    path: string;
+    content: string;
+    graph: CodeGraph;
+}>, opts?: CacheOptions): Promise<void>;
+/**
+ * Public eviction entry point. Prefer the in-save fast path; use this only
+ * when invoking eviction independently of a save (e.g. to reclaim space
+ * after a budget change).
+ */
+export declare function evictLRU(opts?: CacheOptions): Promise<void>;
+export declare function clearRepoCache(opts?: CacheOptions): Promise<void>;
+export declare function saveSnapshot(name: string, graph: CodeGraph, opts?: CacheOptions): Promise<void>;
+export declare function loadSnapshot(name: string, opts?: CacheOptions): Promise<CodeGraph | null>;
+export declare function listSnapshots(opts?: CacheOptions): Promise<string[]>;
+export declare function deleteSnapshot(name: string, opts?: CacheOptions): Promise<void>;
+//# sourceMappingURL=cache.d.ts.map

package/dist/graph/cache.d.ts.map

@@ -0,0 +1 @@
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