cgraphx 1.1.0

package/dist/mcp/transport.js

@@ -0,0 +1,359 @@
+"use strict";
+/**
+ * MCP JSON-RPC Transports
+ *
+ * Two flavors share the same wire format (newline-delimited JSON-RPC 2.0):
+ *
+ * - `StdioTransport` — original transport; reads/writes the process's
+ *   stdin/stdout. Used by direct-mode MCP servers.
+ * - `SocketTransport` — wraps a single `net.Socket`. Used by the shared-daemon
+ *   architecture (see {@link ./daemon}) to multiplex multiple MCP clients onto
+ *   one CodeGraph instance via per-connection sessions.
+ *
+ * Both implement {@link JsonRpcTransport} so the session-level protocol logic
+ * (initialize / tools/list / tools/call, plus server-initiated `roots/list`)
+ * is identical regardless of where the bytes come from.
+ */
+var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    var desc = Object.getOwnPropertyDescriptor(m, k);
+    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
+      desc = { enumerable: true, get: function() { return m[k]; } };
+    }
+    Object.defineProperty(o, k2, desc);
+}) : (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    o[k2] = m[k];
+}));
+var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
+    Object.defineProperty(o, "default", { enumerable: true, value: v });
+}) : function(o, v) {
+    o["default"] = v;
+});
+var __importStar = (this && this.__importStar) || (function () {
+    var ownKeys = function(o) {
+        ownKeys = Object.getOwnPropertyNames || function (o) {
+            var ar = [];
+            for (var k in o) if (Object.prototype.hasOwnProperty.call(o, k)) ar[ar.length] = k;
+            return ar;
+        };
+        return ownKeys(o);
+    };
+    return function (mod) {
+        if (mod && mod.__esModule) return mod;
+        var result = {};
+        if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
+        __setModuleDefault(result, mod);
+        return result;
+    };
+})();
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.SocketTransport = exports.StdioTransport = exports.ErrorCodes = void 0;
+const readline = __importStar(require("readline"));
+// Standard JSON-RPC error codes
+exports.ErrorCodes = {
+    ParseError: -32700,
+    InvalidRequest: -32600,
+    MethodNotFound: -32601,
+    InvalidParams: -32602,
+    InternalError: -32603,
+};
+/**
+ * Shared implementation of newline-delimited JSON-RPC 2.0 over any
+ * `Readable`/`Writable` stream pair. Stdio and socket transports both wrap
+ * this — the only difference between them is which streams get plugged in
+ * and how a "close" propagates back to the owning code.
+ */
+class LineBasedJsonRpcTransport {
+    messageHandler = null;
+    // Outstanding server-initiated requests (e.g. roots/list), keyed by the id
+    // we sent. Responses from the client are matched back here.
+    pending = new Map();
+    nextRequestId = 1;
+    stopped = false;
+    /**
+     * Send a server-initiated request to the client and await its response.
+     *
+     * MCP is bidirectional: the server can ask the client questions too. We use
+     * this for `roots/list` — the spec-blessed way to learn the workspace root
+     * when the client didn't pass one in `initialize` (see issue #196). Rejects
+     * on timeout so callers can fall back rather than hang forever.
+     */
+    request(method, params, timeoutMs = 5000) {
+        const id = `${this.idPrefix()}-${this.nextRequestId++}`;
+        return new Promise((resolve, reject) => {
+            const timer = setTimeout(() => {
+                this.pending.delete(id);
+                reject(new Error(`Timed out after ${timeoutMs}ms waiting for "${method}" response`));
+            }, timeoutMs);
+            // Don't let a pending request keep the process alive on shutdown.
+            timer.unref?.();
+            this.pending.set(id, {
+                resolve: (value) => { clearTimeout(timer); resolve(value); },
+                reject: (error) => { clearTimeout(timer); reject(error); },
+            });
+            this.write(JSON.stringify({ jsonrpc: '2.0', id, method, params }));
+        });
+    }
+    send(response) {
+        this.write(JSON.stringify(response));
+    }
+    notify(method, params) {
+        const notification = { jsonrpc: '2.0', method, params };
+        this.write(JSON.stringify(notification));
+    }
+    sendResult(id, result) {
+        this.send({ jsonrpc: '2.0', id, result });
+    }
+    sendError(id, code, message, data) {
+        this.send({ jsonrpc: '2.0', id, error: { code, message, data } });
+    }
+    /**
+     * Fail any in-flight server-initiated requests so their awaiters don't hang.
+     * Called from `stop()` in subclasses.
+     */
+    rejectPending(reason) {
+        for (const { reject } of this.pending.values()) {
+            reject(new Error(reason));
+        }
+        this.pending.clear();
+    }
+    /**
+     * Handle an incoming line of JSON. Both transports feed lines here.
+     */
+    async handleLine(line) {
+        const trimmed = line.trim();
+        if (!trimmed)
+            return;
+        let parsed;
+        try {
+            parsed = JSON.parse(trimmed);
+        }
+        catch {
+            this.sendError(null, exports.ErrorCodes.ParseError, 'Parse error: invalid JSON');
+            return;
+        }
+        // Response to a server-initiated request (has id + result/error, no method).
+        // Route it to the awaiting requester instead of the message handler — these
+        // used to be dropped as "Invalid Request" because they carry no method.
+        const obj = parsed;
+        if (obj?.jsonrpc === '2.0' &&
+            typeof obj.method !== 'string' &&
+            'id' in obj &&
+            ('result' in obj || 'error' in obj)) {
+            this.handleResponse(obj);
+            return;
+        }
+        // Validate basic JSON-RPC structure
+        if (!this.isValidMessage(parsed)) {
+            this.sendError(null, exports.ErrorCodes.InvalidRequest, 'Invalid Request: not a valid JSON-RPC 2.0 message');
+            return;
+        }
+        if (this.messageHandler) {
+            try {
+                await this.messageHandler(parsed);
+            }
+            catch (err) {
+                const message = parsed;
+                if ('id' in message) {
+                    this.sendError(message.id, exports.ErrorCodes.InternalError, `Internal error: ${err instanceof Error ? err.message : String(err)}`);
+                }
+            }
+        }
+    }
+    /**
+     * Resolve (or reject) the pending server-initiated request matching this
+     * response's id. Unknown ids are ignored — the client may echo something we
+     * never sent, or a request may have already timed out.
+     */
+    handleResponse(msg) {
+        const id = msg.id;
+        const pending = this.pending.get(id);
+        if (!pending)
+            return;
+        this.pending.delete(id);
+        if ('error' in msg && msg.error) {
+            const err = msg.error;
+            pending.reject(new Error(err.message || 'Request failed'));
+        }
+        else {
+            pending.resolve(msg.result);
+        }
+    }
+    /**
+     * Check if message is a valid JSON-RPC 2.0 message
+     */
+    isValidMessage(msg) {
+        if (typeof msg !== 'object' || msg === null)
+            return false;
+        const obj = msg;
+        if (obj.jsonrpc !== '2.0')
+            return false;
+        if (typeof obj.method !== 'string')
+            return false;
+        return true;
+    }
+}
+/**
+ * Stdio Transport for MCP
+ *
+ * Reads JSON-RPC messages from stdin and writes responses to stdout. Used by
+ * the direct (single-process) MCP server path, where the MCP host launches
+ * one server per session and talks to it over the child's stdio. Also used by
+ * shared-daemon mode for the launcher's session (with `exitOnClose: false`)
+ * so the daemon outlives its launcher.
+ */
+class StdioTransport extends LineBasedJsonRpcTransport {
+    rl = null;
+    opts;
+    constructor(opts = {}) {
+        super();
+        this.opts = {
+            exitOnClose: opts.exitOnClose ?? true,
+            onClose: opts.onClose ?? (() => { }),
+        };
+    }
+    start(handler) {
+        this.messageHandler = handler;
+        this.rl = readline.createInterface({
+            input: process.stdin,
+            output: process.stdout,
+            terminal: false,
+        });
+        this.rl.on('line', async (line) => {
+            await this.handleLine(line);
+        });
+        // readline 'close' fires on a clean stdin EOF. But a socket-backed stdin
+        // (the VS Code stdio shape) can fail with an 'error' (ECONNRESET/hangup)
+        // that readline doesn't surface as 'close' — unhandled, it escalated to
+        // the global uncaughtException handler (which keeps running), orphaning
+        // the server and, on Linux, busy-spinning a POLLHUP fd at 100% CPU. Treat
+        // 'error' as terminal too, and destroy stdin so the fd leaves epoll (#799).
+        let closed = false;
+        const onStreamEnd = () => {
+            if (closed)
+                return;
+            closed = true;
+            try {
+                process.stdin.destroy();
+            }
+            catch { /* already gone */ }
+            this.opts.onClose();
+            if (this.opts.exitOnClose) {
+                process.exit(0);
+            }
+        };
+        this.rl.on('close', onStreamEnd);
+        process.stdin.on('error', onStreamEnd);
+    }
+    stop() {
+        if (this.stopped)
+            return;
+        this.stopped = true;
+        this.rejectPending('Transport stopped');
+        if (this.rl) {
+            this.rl.close();
+            this.rl = null;
+        }
+    }
+    write(line) {
+        process.stdout.write(line + '\n');
+    }
+    idPrefix() {
+        return 'cg-srv';
+    }
+}
+exports.StdioTransport = StdioTransport;
+/**
+ * Socket Transport for MCP daemon sessions.
+ *
+ * Wraps a single `net.Socket` (Unix domain socket on POSIX, named pipe on
+ * Windows). One instance per connected MCP client. Unlike {@link StdioTransport},
+ * `stop()` and stream-close *don't* call `process.exit` — a daemon-side session
+ * ending must not bring down the whole daemon.
+ */
+class SocketTransport extends LineBasedJsonRpcTransport {
+    socket;
+    prefix;
+    buffer = '';
+    closeHandlers = [];
+    constructor(socket, prefix = 'cg-sock') {
+        super();
+        this.socket = socket;
+        this.prefix = prefix;
+    }
+    /**
+     * Register a callback fired exactly once when the socket closes (from either
+     * side). Used by the daemon to decrement its connected-clients refcount.
+     */
+    onClose(handler) {
+        this.closeHandlers.push(handler);
+    }
+    start(handler) {
+        this.messageHandler = handler;
+        this.socket.setEncoding('utf8');
+        this.socket.on('data', (chunk) => {
+            this.buffer += chunk;
+            let idx;
+            // Drain every complete line; tail-fragment stays in the buffer for the
+            // next chunk. The handler is async but we don't await it here — JSON-RPC
+            // permits out-of-order responses, and serializing here would deadlock if
+            // a handler issued a server-initiated request that needed a *later* line
+            // to arrive (e.g. roots/list mid-tools-call).
+            while ((idx = this.buffer.indexOf('\n')) !== -1) {
+                const line = this.buffer.slice(0, idx);
+                this.buffer = this.buffer.slice(idx + 1);
+                void this.handleLine(line);
+            }
+        });
+        this.socket.on('close', () => this.handleSocketClose());
+        this.socket.on('error', (err) => {
+            // Don't crash the daemon over a broken pipe; just shut this connection.
+            process.stderr.write(`[cgraphx daemon] socket error: ${err.message}\n`);
+            this.handleSocketClose();
+        });
+    }
+    stop() {
+        if (this.stopped)
+            return;
+        this.stopped = true;
+        this.rejectPending('Transport stopped');
+        if (!this.socket.destroyed) {
+            this.socket.end();
+            this.socket.destroy();
+        }
+    }
+    /**
+     * Write a one-shot line directly to the socket (no JSON-RPC framing applied
+     * by this class — caller produces the line). The daemon uses this for the
+     * hello/handshake line that precedes the JSON-RPC stream.
+     */
+    writeRaw(line) {
+        if (!this.socket.destroyed) {
+            this.socket.write(line.endsWith('\n') ? line : line + '\n');
+        }
+    }
+    write(line) {
+        if (!this.socket.destroyed) {
+            this.socket.write(line + '\n');
+        }
+    }
+    idPrefix() {
+        return this.prefix;
+    }
+    handleSocketClose() {
+        if (this.stopped)
+            return;
+        this.stopped = true;
+        this.rejectPending('Socket closed');
+        for (const h of this.closeHandlers) {
+            try {
+                h();
+            }
+            catch { /* never let a close-handler take the daemon down */ }
+        }
+        this.closeHandlers = [];
+    }
+}
+exports.SocketTransport = SocketTransport;
+//# sourceMappingURL=transport.js.map

package/dist/mcp/transport.js.map

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package/dist/mcp/version.d.ts

@@ -0,0 +1,19 @@
+/**
+ * Resolved package version, computed once at module load.
+ *
+ * The version string is the rendezvous datum between cooperating daemon and
+ * proxy processes: the daemon advertises its version in the hello line, and
+ * the proxy refuses to share IPC across a mismatch (falls back to direct
+ * mode). Keeping the resolution in one place avoids drift between the CLI
+ * `--version` output (which reads `package.json` directly) and the daemon
+ * handshake.
+ *
+ * Resolution strategy: read the bundled `package.json` two levels up from
+ * this file — same relative position whether we're loaded from `src/mcp/` or
+ * the `dist/mcp/` output, since `tsc` preserves the layout. If reading fails
+ * (e.g. the package was unpacked oddly), fall back to "0.0.0-unknown" — a
+ * sentinel that will never match a real version, so the proxy harmlessly
+ * falls back to direct mode.
+ */
+export declare const CodeGraphPackageVersion: string;
+//# sourceMappingURL=version.d.ts.map

package/dist/mcp/version.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"version.d.ts","sourceRoot":"","sources":["../../src/mcp/version.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;GAgBG;AAmBH,eAAO,MAAM,uBAAuB,QAAuB,CAAC"}

package/dist/mcp/version.js

@@ -0,0 +1,71 @@
+"use strict";
+/**
+ * Resolved package version, computed once at module load.
+ *
+ * The version string is the rendezvous datum between cooperating daemon and
+ * proxy processes: the daemon advertises its version in the hello line, and
+ * the proxy refuses to share IPC across a mismatch (falls back to direct
+ * mode). Keeping the resolution in one place avoids drift between the CLI
+ * `--version` output (which reads `package.json` directly) and the daemon
+ * handshake.
+ *
+ * Resolution strategy: read the bundled `package.json` two levels up from
+ * this file — same relative position whether we're loaded from `src/mcp/` or
+ * the `dist/mcp/` output, since `tsc` preserves the layout. If reading fails
+ * (e.g. the package was unpacked oddly), fall back to "0.0.0-unknown" — a
+ * sentinel that will never match a real version, so the proxy harmlessly
+ * falls back to direct mode.
+ */
+var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    var desc = Object.getOwnPropertyDescriptor(m, k);
+    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
+      desc = { enumerable: true, get: function() { return m[k]; } };
+    }
+    Object.defineProperty(o, k2, desc);
+}) : (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    o[k2] = m[k];
+}));
+var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
+    Object.defineProperty(o, "default", { enumerable: true, value: v });
+}) : function(o, v) {
+    o["default"] = v;
+});
+var __importStar = (this && this.__importStar) || (function () {
+    var ownKeys = function(o) {
+        ownKeys = Object.getOwnPropertyNames || function (o) {
+            var ar = [];
+            for (var k in o) if (Object.prototype.hasOwnProperty.call(o, k)) ar[ar.length] = k;
+            return ar;
+        };
+        return ownKeys(o);
+    };
+    return function (mod) {
+        if (mod && mod.__esModule) return mod;
+        var result = {};
+        if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
+        __setModuleDefault(result, mod);
+        return result;
+    };
+})();
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.CodeGraphPackageVersion = void 0;
+const fs = __importStar(require("fs"));
+const path = __importStar(require("path"));
+function readPackageVersion() {
+    try {
+        const pkgPath = path.join(__dirname, '..', '..', 'package.json');
+        const raw = fs.readFileSync(pkgPath, 'utf8');
+        const parsed = JSON.parse(raw);
+        if (typeof parsed?.version === 'string' && parsed.version.length > 0) {
+            return parsed.version;
+        }
+    }
+    catch {
+        // Fall through to sentinel.
+    }
+    return '0.0.0-unknown';
+}
+exports.CodeGraphPackageVersion = readPackageVersion();
+//# sourceMappingURL=version.js.map

package/dist/mcp/version.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"version.js","sourceRoot":"","sources":["../../src/mcp/version.ts"],"names":[],"mappings":";AAAA;;;;;;;;;;;;;;;;GAgBG;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;AAEH,uCAAyB;AACzB,2CAA6B;AAE7B,SAAS,kBAAkB;IACzB,IAAI,CAAC;QACH,MAAM,OAAO,GAAG,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,IAAI,EAAE,IAAI,EAAE,cAAc,CAAC,CAAC;QACjE,MAAM,GAAG,GAAG,EAAE,CAAC,YAAY,CAAC,OAAO,EAAE,MAAM,CAAC,CAAC;QAC7C,MAAM,MAAM,GAAG,IAAI,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC;QAC/B,IAAI,OAAO,MAAM,EAAE,OAAO,KAAK,QAAQ,IAAI,MAAM,CAAC,OAAO,CAAC,MAAM,GAAG,CAAC,EAAE,CAAC;YACrE,OAAO,MAAM,CAAC,OAAO,CAAC;QACxB,CAAC;IACH,CAAC;IAAC,MAAM,CAAC;QACP,4BAA4B;IAC9B,CAAC;IACD,OAAO,eAAe,CAAC;AACzB,CAAC;AAEY,QAAA,uBAAuB,GAAG,kBAAkB,EAAE,CAAC"}

package/dist/project-config.d.ts

@@ -0,0 +1,36 @@
+import { Language } from './types';
+/** Filename of the project-scoped config, resolved relative to the project root. */
+export declare const PROJECT_CONFIG_FILENAME = "cgraphx.json";
+export interface ProjectConfig {
+    /** Map of custom file extension (`.foo`) to a supported language id. */
+    extensions?: Record<string, string>;
+    /**
+     * Gitignore-style patterns naming gitignored directories whose embedded git
+     * repositories should be indexed anyway — the explicit opt-in to override
+     * `.gitignore` for nested-repo discovery (#622, #699). Absent/empty (the
+     * default) means `.gitignore` is fully respected: gitignored embedded repos
+     * are never discovered or indexed (#970, #976).
+     */
+    includeIgnored?: string[];
+}
+/**
+ * Load the validated extension overrides for a project, mtime-cached.
+ *
+ * Returns a map of `.ext` → supported language id. The result merges on top of
+ * the built-in extension map at the point of use (see `detectLanguage` /
+ * `isSourceFile`), with these user mappings taking precedence. Returns an empty
+ * map when there is no `cgraphx.json` (the zero-config default).
+ */
+export declare function loadExtensionOverrides(rootDir: string): Record<string, Language>;
+/**
+ * Load the validated `includeIgnored` patterns for a project, mtime-cached.
+ *
+ * These name gitignored directories whose embedded git repositories should be
+ * indexed despite `.gitignore` (#622, #699). An empty result — the zero-config
+ * default — means `.gitignore` is fully respected: gitignored embedded repos
+ * are never discovered or indexed (#970, #976).
+ */
+export declare function loadIncludeIgnoredPatterns(rootDir: string): string[];
+/** Test/maintenance hook: forget cached config (e.g. after rewriting it in a test). */
+export declare function clearProjectConfigCache(): void;
+//# sourceMappingURL=project-config.d.ts.map

package/dist/project-config.d.ts.map

@@ -0,0 +1 @@
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