causantic 0.2.1 → 0.3.0

package/dist/eval/experiments/vector-decay-shapes/graph-range-experiment.js

@@ -1,316 +0,0 @@
-/**
- * Graph traversal experiment for the 4-20 hop range.
- *
- * This is the "sweet spot" for graph-based retrieval:
- * - 0-3 hops: Claude already has in context
- * - 4-20 hops: Graph traversal with decay
- * - 20+ hops: Vector similarity search (not graph)
- *
- * Also runs forward analysis: how does relevance decay into the future?
- */
-import { getDb } from '../../../storage/db.js';
-import { deserialize, hopCount } from '../../../temporal/vector-clock.js';
-import { getReferenceClock } from '../../../storage/clock-store.js';
-const MIN_HOP = 4; // Beyond Claude's context
-const MAX_HOP = 20; // Graph traversal limit
-const NEGATIVE_SAMPLE_COUNT = 10;
-const WPH_VALUES = [0.70, 0.75, 0.80, 0.85, 0.90, 0.95];
-const MIN_PATH_WEIGHT = 0.001;
-function calculatePathWeight(hops, wph) {
-    const weight = Math.pow(wph, hops);
-    return weight >= MIN_PATH_WEIGHT ? weight : 0;
-}
-const db = getDb();
-// Load chunks
-const chunks = new Map();
-const chunkRows = db.prepare(`
-  SELECT id, session_slug as sessionSlug, vector_clock as vectorClock
-  FROM chunks WHERE vector_clock IS NOT NULL
-`).all();
-for (const row of chunkRows) {
-    chunks.set(row.id, row);
-}
-// Cache reference clocks
-const refClocks = new Map();
-function getRefClock(slug) {
-    if (!refClocks.has(slug)) {
-        refClocks.set(slug, getReferenceClock(slug));
-    }
-    return refClocks.get(slug);
-}
-// Group chunks by project
-const projectChunks = new Map();
-for (const chunk of chunks.values()) {
-    const existing = projectChunks.get(chunk.sessionSlug) ?? [];
-    existing.push(chunk);
-    projectChunks.set(chunk.sessionSlug, existing);
-}
-function sampleNegatives(projectSlug, excludeIds, count) {
-    const available = projectChunks.get(projectSlug) ?? [];
-    const candidates = available.filter(c => !excludeIds.has(c.id));
-    const shuffled = [...candidates];
-    for (let i = shuffled.length - 1; i > 0; i--) {
-        const j = Math.floor(Math.random() * (i + 1));
-        [shuffled[i], shuffled[j]] = [shuffled[j], shuffled[i]];
-    }
-    return shuffled.slice(0, count);
-}
-// ============================================================
-// BACKWARD ANALYSIS (4-20 hops)
-// ============================================================
-console.log('='.repeat(100));
-console.log('BACKWARD ANALYSIS: Graph Traversal for 4-20 Hop Range');
-console.log('='.repeat(100));
-const backwardEdges = db.prepare(`
-  SELECT source_chunk_id as sourceChunkId, target_chunk_id as targetChunkId,
-         vector_clock as vectorClock, reference_type as referenceType
-  FROM edges
-  WHERE edge_type = 'backward' AND vector_clock IS NOT NULL
-    AND reference_type IN ('file-path', 'code-entity', 'explicit-backref', 'error-fragment')
-`).all();
-const backwardInRange = [];
-for (const edge of backwardEdges) {
-    const sourceChunk = chunks.get(edge.sourceChunkId);
-    if (!sourceChunk?.vectorClock)
-        continue;
-    const edgeClock = deserialize(edge.vectorClock);
-    const refClock = getRefClock(sourceChunk.sessionSlug);
-    const hops = hopCount(edgeClock, refClock);
-    if (hops >= MIN_HOP && hops <= MAX_HOP) {
-        backwardInRange.push({ ...edge, hops, projectSlug: sourceChunk.sessionSlug });
-    }
-}
-console.log(`\nEdges in 4-20 hop range: ${backwardInRange.length}`);
-// Hop distribution
-const backwardHopDist = {};
-for (const edge of backwardInRange) {
-    const bin = `${Math.floor(edge.hops / 5) * 5}-${Math.floor(edge.hops / 5) * 5 + 4}`;
-    backwardHopDist[bin] = (backwardHopDist[bin] ?? 0) + 1;
-}
-console.log('\nHop distribution:');
-for (const [bin, count] of Object.entries(backwardHopDist).sort()) {
-    console.log(`  ${bin}: ${count} (${(count / backwardInRange.length * 100).toFixed(1)}%)`);
-}
-// Group by source
-const backwardBySource = new Map();
-for (const edge of backwardInRange) {
-    const existing = backwardBySource.get(edge.sourceChunkId) ?? [];
-    existing.push(edge);
-    backwardBySource.set(edge.sourceChunkId, existing);
-}
-// Run experiment
-console.log('\nPath weight = wph^hops\n');
-console.log('wph   | MRR    | Reach% | 4-9    | 10-14  | 15-20  | Rank@1 | n');
-console.log('-'.repeat(75));
-const backwardResults = [];
-for (const wph of WPH_VALUES) {
-    let totalRR = 0;
-    let rank1 = 0;
-    let queries = 0;
-    let reachable = 0;
-    const rrByBin = { '4-9': [], '10-14': [], '15-20': [] };
-    for (const [sourceChunkId, edges] of backwardBySource) {
-        const sourceChunk = chunks.get(sourceChunkId);
-        const refClock = getRefClock(sourceChunk.sessionSlug);
-        const positives = edges.map(e => ({
-            chunkId: e.targetChunkId,
-            hops: e.hops,
-            pathWeight: calculatePathWeight(e.hops, wph),
-        }));
-        const anyReachable = positives.some(p => p.pathWeight > 0);
-        if (anyReachable)
-            reachable++;
-        const excludeIds = new Set([sourceChunkId, ...positives.map(p => p.chunkId)]);
-        const negChunks = sampleNegatives(sourceChunk.sessionSlug, excludeIds, NEGATIVE_SAMPLE_COUNT);
-        if (negChunks.length === 0)
-            continue;
-        const negatives = negChunks.filter(c => c.vectorClock).map(c => {
-            const clock = deserialize(c.vectorClock);
-            const hops = hopCount(clock, refClock);
-            return { chunkId: c.id, hops, pathWeight: calculatePathWeight(hops, wph) };
-        });
-        const candidates = [
-            ...positives.map(p => ({ ...p, isPositive: true })),
-            ...negatives.map(n => ({ ...n, isPositive: false })),
-        ];
-        candidates.sort((a, b) => b.pathWeight - a.pathWeight);
-        let firstPosRank = 0;
-        for (let i = 0; i < candidates.length; i++) {
-            if (candidates[i].isPositive) {
-                firstPosRank = i + 1;
-                break;
-            }
-        }
-        const rr = firstPosRank > 0 ? 1 / firstPosRank : 0;
-        totalRR += rr;
-        if (firstPosRank === 1)
-            rank1++;
-        queries++;
-        const minHop = Math.min(...positives.map(p => p.hops));
-        const bin = minHop < 10 ? '4-9' : minHop < 15 ? '10-14' : '15-20';
-        rrByBin[bin].push(rr);
-    }
-    const mrr = queries > 0 ? totalRR / queries : 0;
-    const mrrByBin = {};
-    for (const bin of ['4-9', '10-14', '15-20']) {
-        mrrByBin[bin] = rrByBin[bin].length > 0
-            ? rrByBin[bin].reduce((a, b) => a + b, 0) / rrByBin[bin].length : 0;
-    }
-    backwardResults.push({ wph, mrr, reachPct: reachable / queries * 100, mrrByBin, rank1, n: queries });
-    console.log([
-        wph.toFixed(2),
-        mrr.toFixed(3).padStart(6),
-        `${(reachable / queries * 100).toFixed(0)}%`.padStart(6),
-        mrrByBin['4-9'].toFixed(3).padStart(6),
-        mrrByBin['10-14'].toFixed(3).padStart(6),
-        mrrByBin['15-20'].toFixed(3).padStart(6),
-        rank1.toString().padStart(6),
-        queries.toString().padStart(5),
-    ].join(' | '));
-}
-// ============================================================
-// FORWARD ANALYSIS
-// ============================================================
-console.log('\n' + '='.repeat(100));
-console.log('FORWARD ANALYSIS: Predicting Future References');
-console.log('='.repeat(100));
-console.log('\nQuestion: Given a chunk, which future chunks (1-20 hops ahead) will reference it?');
-const forwardEdges = db.prepare(`
-  SELECT source_chunk_id as sourceChunkId, target_chunk_id as targetChunkId,
-         vector_clock as vectorClock, reference_type as referenceType
-  FROM edges
-  WHERE edge_type = 'forward' AND vector_clock IS NOT NULL
-    AND reference_type IN ('file-path', 'code-entity', 'explicit-backref', 'error-fragment')
-`).all();
-const forwardInRange = [];
-for (const edge of forwardEdges) {
-    const sourceChunk = chunks.get(edge.sourceChunkId);
-    const targetChunk = chunks.get(edge.targetChunkId);
-    if (!sourceChunk?.vectorClock || !targetChunk?.vectorClock)
-        continue;
-    const sourceClock = deserialize(sourceChunk.vectorClock);
-    const targetClock = deserialize(targetChunk.vectorClock);
-    // Forward hops: how far ahead is target from source
-    // This is the opposite direction of backward hops
-    const forwardHops = hopCount(sourceClock, targetClock);
-    if (forwardHops >= 1 && forwardHops <= MAX_HOP) {
-        forwardInRange.push({ ...edge, forwardHops, projectSlug: sourceChunk.sessionSlug });
-    }
-}
-console.log(`\nForward edges in 1-20 hop range: ${forwardInRange.length}`);
-// Hop distribution
-const forwardHopDist = {};
-for (const edge of forwardInRange) {
-    const bin = edge.forwardHops <= 3 ? '1-3' :
-        edge.forwardHops <= 7 ? '4-7' :
-            edge.forwardHops <= 12 ? '8-12' : '13-20';
-    forwardHopDist[bin] = (forwardHopDist[bin] ?? 0) + 1;
-}
-console.log('\nForward hop distribution (how far ahead is the referencing chunk):');
-for (const [bin, count] of Object.entries(forwardHopDist)) {
-    console.log(`  ${bin} hops ahead: ${count} (${(count / forwardInRange.length * 100).toFixed(1)}%)`);
-}
-// Group by source (the chunk being referenced)
-const forwardBySource = new Map();
-for (const edge of forwardInRange) {
-    const existing = forwardBySource.get(edge.sourceChunkId) ?? [];
-    existing.push(edge);
-    forwardBySource.set(edge.sourceChunkId, existing);
-}
-// Run forward experiment
-console.log('\nForward decay: predicting which future chunks reference this one');
-console.log('Path weight = wph^forwardHops (decay into the future)\n');
-console.log('wph   | MRR    | Reach% | 1-3    | 4-7    | 8-12   | 13-20  | Rank@1 | n');
-console.log('-'.repeat(80));
-const forwardResults = [];
-for (const wph of WPH_VALUES) {
-    let totalRR = 0;
-    let rank1 = 0;
-    let queries = 0;
-    let reachable = 0;
-    const rrByBin = { '1-3': [], '4-7': [], '8-12': [], '13-20': [] };
-    for (const [sourceChunkId, edges] of forwardBySource) {
-        const sourceChunk = chunks.get(sourceChunkId);
-        const sourceClock = deserialize(sourceChunk.vectorClock);
-        // Positives are the target chunks that reference this source
-        const positives = edges.map(e => ({
-            chunkId: e.targetChunkId,
-            forwardHops: e.forwardHops,
-            pathWeight: calculatePathWeight(e.forwardHops, wph),
-        }));
-        const anyReachable = positives.some(p => p.pathWeight > 0);
-        if (anyReachable)
-            reachable++;
-        // Sample negatives from same project
-        const excludeIds = new Set([sourceChunkId, ...positives.map(p => p.chunkId)]);
-        const negChunks = sampleNegatives(sourceChunk.sessionSlug, excludeIds, NEGATIVE_SAMPLE_COUNT);
-        if (negChunks.length === 0)
-            continue;
-        // Calculate forward hops for negatives
-        const negatives = negChunks.filter(c => c.vectorClock).map(c => {
-            const negClock = deserialize(c.vectorClock);
-            const forwardHops = hopCount(sourceClock, negClock);
-            return {
-                chunkId: c.id,
-                forwardHops,
-                pathWeight: calculatePathWeight(Math.abs(forwardHops), wph),
-            };
-        });
-        const candidates = [
-            ...positives.map(p => ({ ...p, isPositive: true })),
-            ...negatives.map(n => ({ ...n, isPositive: false })),
-        ];
-        candidates.sort((a, b) => b.pathWeight - a.pathWeight);
-        let firstPosRank = 0;
-        for (let i = 0; i < candidates.length; i++) {
-            if (candidates[i].isPositive) {
-                firstPosRank = i + 1;
-                break;
-            }
-        }
-        const rr = firstPosRank > 0 ? 1 / firstPosRank : 0;
-        totalRR += rr;
-        if (firstPosRank === 1)
-            rank1++;
-        queries++;
-        const minHop = Math.min(...positives.map(p => p.forwardHops));
-        const bin = minHop <= 3 ? '1-3' : minHop <= 7 ? '4-7' : minHop <= 12 ? '8-12' : '13-20';
-        rrByBin[bin].push(rr);
-    }
-    const mrr = queries > 0 ? totalRR / queries : 0;
-    const mrrByBin = {};
-    for (const bin of ['1-3', '4-7', '8-12', '13-20']) {
-        mrrByBin[bin] = rrByBin[bin].length > 0
-            ? rrByBin[bin].reduce((a, b) => a + b, 0) / rrByBin[bin].length : 0;
-    }
-    forwardResults.push({ wph, mrr, reachPct: reachable / queries * 100, mrrByBin, rank1, n: queries });
-    console.log([
-        wph.toFixed(2),
-        mrr.toFixed(3).padStart(6),
-        `${(reachable / queries * 100).toFixed(0)}%`.padStart(6),
-        mrrByBin['1-3'].toFixed(3).padStart(6),
-        mrrByBin['4-7'].toFixed(3).padStart(6),
-        mrrByBin['8-12'].toFixed(3).padStart(6),
-        mrrByBin['13-20'].toFixed(3).padStart(6),
-        rank1.toString().padStart(6),
-        queries.toString().padStart(5),
-    ].join(' | '));
-}
-// ============================================================
-// SUMMARY
-// ============================================================
-console.log('\n' + '='.repeat(100));
-console.log('SUMMARY');
-console.log('='.repeat(100));
-const bestBackward = backwardResults.reduce((a, b) => a.mrr > b.mrr ? a : b);
-const bestForward = forwardResults.reduce((a, b) => a.mrr > b.mrr ? a : b);
-console.log('\nBACKWARD (4-20 hops, retrieval):');
-console.log(`  Best: wph=${bestBackward.wph} (MRR=${bestBackward.mrr.toFixed(3)}, ${bestBackward.reachPct.toFixed(0)}% reachable)`);
-console.log('\nFORWARD (1-20 hops, prediction):');
-console.log(`  Best: wph=${bestForward.wph} (MRR=${bestForward.mrr.toFixed(3)}, ${bestForward.reachPct.toFixed(0)}% reachable)`);
-// Check if different curves are optimal
-if (bestBackward.wph !== bestForward.wph) {
-    console.log('\n  → Different optimal decay rates for backward vs forward!');
-    console.log(`    Backward: ${bestBackward.wph}, Forward: ${bestForward.wph}`);
-}
-//# sourceMappingURL=graph-range-experiment.js.map

package/dist/eval/experiments/vector-decay-shapes/graph-range-experiment.js.map

@@ -1 +0,0 @@
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package/dist/eval/experiments/vector-decay-shapes/hop-decay.d.ts

@@ -1,19 +0,0 @@
-/**
- * Hop-based decay curve calculations.
- *
- * Translates the time-based decay curve concepts to hop counts:
- * - Exponential: weight = w0 * (weightPerHop)^hops
- * - Linear: weight = w0 - decayPerHop * hops
- * - Delayed Linear: hold for N hops, then linear
- * - Multi-linear: sum of multiple tiers
- */
-import type { HopDecayConfig } from './types.js';
-/**
- * Calculate decay weight for a given hop count.
- */
-export declare function calculateHopDecayWeight(config: HopDecayConfig, hops: number): number;
-/**
- * Get the hop count where weight reaches zero (or null if asymptotic).
- */
-export declare function getDeathHops(config: HopDecayConfig): number | null;
-//# sourceMappingURL=hop-decay.d.ts.map

package/dist/eval/experiments/vector-decay-shapes/hop-decay.d.ts.map

@@ -1 +0,0 @@
-{"version":3,"file":"hop-decay.d.ts","sourceRoot":"","sources":["../../../../src/eval/experiments/vector-decay-shapes/hop-decay.ts"],"names":[],"mappings":"AAAA;;;;;;;;GAQG;AAEH,OAAO,KAAK,EAAE,cAAc,EAAgB,MAAM,YAAY,CAAC;AAE/D;;GAEG;AACH,wBAAgB,uBAAuB,CAAC,MAAM,EAAE,cAAc,EAAE,IAAI,EAAE,MAAM,GAAG,MAAM,CAuBpF;AA+DD;;GAEG;AACH,wBAAgB,YAAY,CAAC,MAAM,EAAE,cAAc,GAAG,MAAM,GAAG,IAAI,CAqClE"}

package/dist/eval/experiments/vector-decay-shapes/hop-decay.js

@@ -1,127 +0,0 @@
-/**
- * Hop-based decay curve calculations.
- *
- * Translates the time-based decay curve concepts to hop counts:
- * - Exponential: weight = w0 * (weightPerHop)^hops
- * - Linear: weight = w0 - decayPerHop * hops
- * - Delayed Linear: hold for N hops, then linear
- * - Multi-linear: sum of multiple tiers
- */
-/**
- * Calculate decay weight for a given hop count.
- */
-export function calculateHopDecayWeight(config, hops) {
-    if (hops < 0)
-        return config.initialWeight;
-    let weight;
-    switch (config.type) {
-        case 'exponential':
-            weight = calculateExponential(config, hops);
-            break;
-        case 'linear':
-            weight = calculateLinear(config, hops);
-            break;
-        case 'delayed-linear':
-            weight = calculateDelayedLinear(config, hops);
-            break;
-        case 'multi-linear':
-            weight = calculateMultiLinear(config, hops);
-            break;
-        default:
-            weight = config.initialWeight;
-    }
-    return weight >= config.minWeight ? weight : 0;
-}
-/**
- * Exponential decay by hops: w(h) = w0 * (weightPerHop)^h
- */
-function calculateExponential(config, hops) {
-    const w0 = config.initialWeight;
-    const wph = config.weightPerHop ?? 0.8;
-    return w0 * Math.pow(wph, hops);
-}
-/**
- * Linear decay by hops: w(h) = w0 - decayPerHop * h
- */
-function calculateLinear(config, hops) {
-    const w0 = config.initialWeight;
-    const rate = config.decayPerHop ?? 0.1;
-    return Math.max(0, w0 - rate * hops);
-}
-/**
- * Delayed linear: hold at w0 for holdHops, then linear decay.
- * w(h) = w0 if h < holdHops, else w0 - rate * (h - holdHops)
- */
-function calculateDelayedLinear(config, hops) {
-    const w0 = config.initialWeight;
-    const hold = config.holdHops ?? 0;
-    const rate = config.decayPerHop ?? 0.1;
-    if (hops < hold) {
-        return w0;
-    }
-    const decayHops = hops - hold;
-    return Math.max(0, w0 - rate * decayHops);
-}
-/**
- * Multi-linear: sum of multiple tiers.
- */
-function calculateMultiLinear(config, hops) {
-    const tiers = config.tiers ?? [];
-    let totalWeight = 0;
-    for (const tier of tiers) {
-        totalWeight += calculateTierWeight(tier, hops);
-    }
-    return totalWeight;
-}
-/**
- * Calculate weight for a single tier.
- */
-function calculateTierWeight(tier, hops) {
-    if (hops < tier.holdHops) {
-        return tier.initialWeight;
-    }
-    const decayHops = hops - tier.holdHops;
-    return Math.max(0, tier.initialWeight - tier.decayPerHop * decayHops);
-}
-/**
- * Get the hop count where weight reaches zero (or null if asymptotic).
- */
-export function getDeathHops(config) {
-    switch (config.type) {
-        case 'exponential':
-            // Asymptotic - never reaches zero
-            return null;
-        case 'linear': {
-            const w0 = config.initialWeight;
-            const rate = config.decayPerHop ?? 0.1;
-            if (rate <= 0)
-                return null;
-            return Math.ceil(w0 / rate);
-        }
-        case 'delayed-linear': {
-            const w0 = config.initialWeight;
-            const hold = config.holdHops ?? 0;
-            const rate = config.decayPerHop ?? 0.1;
-            if (rate <= 0)
-                return null;
-            return hold + Math.ceil(w0 / rate);
-        }
-        case 'multi-linear': {
-            const tiers = config.tiers ?? [];
-            if (tiers.length === 0)
-                return 0;
-            // Find the tier that dies last
-            let maxDeathHops = 0;
-            for (const tier of tiers) {
-                if (tier.decayPerHop <= 0)
-                    return null;
-                const deathHops = tier.holdHops + Math.ceil(tier.initialWeight / tier.decayPerHop);
-                maxDeathHops = Math.max(maxDeathHops, deathHops);
-            }
-            return maxDeathHops;
-        }
-        default:
-            return null;
-    }
-}
-//# sourceMappingURL=hop-decay.js.map

package/dist/eval/experiments/vector-decay-shapes/hop-decay.js.map

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package/dist/eval/experiments/vector-decay-shapes/index.d.ts

@@ -1,11 +0,0 @@
-/**
- * Hop-based decay shape experiments.
- *
- * Tests different decay curve shapes using hop count (D-T-D cycles)
- * for both backward (retrieval) and forward (prediction) traversal.
- */
-export * from './types.js';
-export * from './hop-decay.js';
-export * from './presets.js';
-export { runHopDecayShapeExperiment, formatResults } from './run-experiment.js';
-//# sourceMappingURL=index.d.ts.map

package/dist/eval/experiments/vector-decay-shapes/index.d.ts.map

@@ -1 +0,0 @@
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package/dist/eval/experiments/vector-decay-shapes/index.js

@@ -1,11 +0,0 @@
-/**
- * Hop-based decay shape experiments.
- *
- * Tests different decay curve shapes using hop count (D-T-D cycles)
- * for both backward (retrieval) and forward (prediction) traversal.
- */
-export * from './types.js';
-export * from './hop-decay.js';
-export * from './presets.js';
-export { runHopDecayShapeExperiment, formatResults } from './run-experiment.js';
-//# sourceMappingURL=index.js.map

package/dist/eval/experiments/vector-decay-shapes/index.js.map

@@ -1 +0,0 @@
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package/dist/eval/experiments/vector-decay-shapes/path-traversal-experiment.d.ts

@@ -1,14 +0,0 @@
-/**
- * Path traversal experiment for decay curve evaluation.
- *
- * This properly simulates the actual retrieval mechanism:
- * - Path weight = product of edge weights along path
- * - For a path of N hops with uniform decay: weight = wph^N
- * - Node score = sum of path weights reaching it
- *
- * Key insight: Linear decay doesn't make sense for path traversal
- * because path weights are multiplicative. Only exponential decay
- * properly models "each hop multiplies weight by wph".
- */
-export {};
-//# sourceMappingURL=path-traversal-experiment.d.ts.map

package/dist/eval/experiments/vector-decay-shapes/path-traversal-experiment.d.ts.map

@@ -1 +0,0 @@
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