brainbank 0.5.0 → 0.7.0

package/dist/cli.js.map

@@ -1 +1 @@
-{"version":3,"sources":["../src/cli/utils.ts","../src/cli/commands/index-cmd.ts","../src/cli/factory.ts","../src/cli/commands/collection.ts","../src/cli/commands/kv.ts","../src/cli/commands/docs.ts","../src/cli/commands/search.ts","../src/cli/commands/context.ts","../src/cli/commands/system.ts","../src/cli/index.ts"],"sourcesContent":["/**\n * BrainBank CLI — Shared Utilities\n *\n * Colors, argument parsing, and result formatting.\n * No BrainBank imports — pure Node.js / terminal helpers.\n */\n\n// ── Colors ──────────────────────────────────────────\n\nexport const c = {\n    green:   (s: string) => `\\x1b[32m${s}\\x1b[0m`,\n    red:     (s: string) => `\\x1b[31m${s}\\x1b[0m`,\n    yellow:  (s: string) => `\\x1b[33m${s}\\x1b[0m`,\n    cyan:    (s: string) => `\\x1b[36m${s}\\x1b[0m`,\n    dim:     (s: string) => `\\x1b[2m${s}\\x1b[0m`,\n    bold:    (s: string) => `\\x1b[1m${s}\\x1b[0m`,\n    magenta: (s: string) => `\\x1b[35m${s}\\x1b[0m`,\n};\n\n// ── Argument Parsing ────────────────────────────────\n\n/** Raw argv, sliced past the Node binary and script path. */\nexport const args = process.argv.slice(2);\n\nexport function getFlag(name: string): string | undefined {\n    const idx = args.indexOf(`--${name}`);\n    return idx >= 0 ? args[idx + 1] : undefined;\n}\n\nexport function hasFlag(name: string): boolean {\n    return args.includes(`--${name}`);\n}\n\n/** Known flags that take a value (--flag <value>). */\nconst VALUE_FLAGS = new Set([\n    'repo', 'depth', 'collection', 'pattern', 'context', 'name',\n    'keep', 'reranker', 'only', 'docs',\n    'ignore', 'meta', 'k', 'mode', 'limit',\n]);\n\n/**\n * Strip all --flags AND their values from an argv slice.\n * Returns only positional arguments.\n *\n *   stripFlags(['ksearch', 'auth', '--repo', '/path'])\n *   → ['ksearch', 'auth']\n */\nexport function stripFlags(argv: string[]): string[] {\n    const result: string[] = [];\n    for (let i = 0; i < argv.length; i++) {\n        if (argv[i].startsWith('--')) {\n            const name = argv[i].slice(2);\n            if (VALUE_FLAGS.has(name)) i++; // skip next (the value)\n            continue;\n        }\n        result.push(argv[i]);\n    }\n    return result;\n}\n\n// ── Result Printer ──────────────────────────────────\n\nexport function printResults(results: any[]): void {\n    if (results.length === 0) {\n        console.log(c.yellow('  No results found.'));\n        return;\n    }\n\n    for (const r of results) {\n        const score = Math.round(r.score * 100);\n\n        if (r.type === 'code') {\n            const m = r.metadata;\n            console.log(\n                `${c.green(`[CODE ${score}%]`)} ${c.bold(r.filePath!)} — ` +\n                `${m.name || m.chunkType} ${c.dim(`L${m.startLine}-${m.endLine}`)}`,\n            );\n            console.log(c.dim(r.content.split('\\n').slice(0, 5).join('\\n')));\n            console.log('');\n        } else if (r.type === 'commit') {\n            const m = r.metadata;\n            console.log(\n                `${c.cyan(`[COMMIT ${score}%]`)} ${c.bold(m.shortHash)} ` +\n                `${r.content} ${c.dim(`(${m.author})`)}`,\n            );\n            if (m.files?.length) console.log(c.dim(`  Files: ${m.files.slice(0, 4).join(', ')}`));\n            console.log('');\n        } else if (r.type === 'document') {\n            const ctx = r.context ? ` — ${c.dim(r.context)}` : '';\n            console.log(\n                `${c.magenta(`[DOC ${score}%]`)} ${c.bold(r.filePath!)} ` +\n                `[${r.metadata.collection}]${ctx}`,\n            );\n            console.log(c.dim(r.content.split('\\n').slice(0, 4).join('\\n')));\n            console.log('');\n        }\n    }\n}\n","/**\n * brainbank index [path] — Index code + git + docs\n */\n\nimport * as path from 'node:path';\nimport { c, args, getFlag, hasFlag } from '@/cli/utils.ts';\nimport { createBrain } from '@/cli/factory.ts';\n\nexport async function cmdIndex(): Promise<void> {\n    const repoPath = args[1] || '.';\n    const force = hasFlag('force');\n    const depth = parseInt(getFlag('depth') || '500', 10);\n    const onlyRaw = getFlag('only');\n    const docsPath = getFlag('docs');\n    const modules = onlyRaw\n        ? onlyRaw.split(',').map(s => s.trim()) as ('code' | 'git' | 'docs')[]\n        : undefined;\n\n    // If --docs is passed, auto-include 'docs' in modules\n    if (docsPath && modules && !modules.includes('docs')) {\n        modules.push('docs');\n    }\n\n    console.log(c.bold('\\n━━━ BrainBank Index ━━━'));\n    console.log(c.dim(`  Repo: ${repoPath}`));\n    console.log(c.dim(`  Force: ${force}`));\n    console.log(c.dim(`  Git depth: ${depth}`));\n    if (modules) console.log(c.dim(`  Modules: ${modules.join(', ')}`));\n    if (docsPath) console.log(c.dim(`  Docs path: ${docsPath}`));\n\n    const brain = await createBrain(repoPath);\n\n    // Auto-register docs collection from --docs path\n    if (docsPath) {\n        const absDocsPath = path.resolve(docsPath);\n        const collName = path.basename(absDocsPath);\n        try {\n            await brain.addCollection({\n                name: collName,\n                path: absDocsPath,\n                pattern: '**/*.md',\n                ignore: ['deprecated/**', 'node_modules/**'],\n            });\n            console.log(c.dim(`  Registered docs collection: ${collName}`));\n        } catch {\n            console.log(c.yellow(`  Warning: docs module not loaded, skipping --docs`));\n        }\n    }\n\n    const result = await brain.index({\n        modules,\n        forceReindex: force,\n        gitDepth: depth,\n        onProgress: (stage, msg) => {\n            process.stdout.write(`\\r  ${c.cyan(stage.toUpperCase())} ${msg}                    `);\n        },\n    });\n\n    console.log('\\n');\n    if (result.code) {\n        console.log(`  ${c.green('Code')}: ${result.code.indexed} indexed, ${result.code.skipped} skipped, ${result.code.chunks ?? 0} chunks`);\n    }\n    if (result.git) {\n        console.log(`  ${c.green('Git')}:  ${result.git.indexed} indexed, ${result.git.skipped} skipped`);\n    }\n    if (result.docs) {\n        for (const [name, stat] of Object.entries(result.docs)) {\n            console.log(`  ${c.green('Docs')}: [${name}] ${stat.indexed} indexed, ${stat.skipped} skipped, ${stat.chunks} chunks`);\n        }\n    }\n\n    const stats = brain.stats();\n    console.log(`\\n  ${c.bold('Totals')}:`);\n    if (stats.code) console.log(`    Code chunks:  ${stats.code.chunks}`);\n    if (stats.git) console.log(`    Git commits:  ${stats.git.commits}`);\n    if (stats.git) console.log(`    Co-edit pairs: ${stats.git.coEdits}`);\n    if (stats.documents) console.log(`    Documents:    ${stats.documents.documents}`);\n\n    brain.close();\n}\n","/**\n * BrainBank CLI — Brain Factory\n *\n * Creates a configured BrainBank instance with built-in indexers,\n * auto-discovered indexers, and config file support.\n */\n\nimport * as path from 'node:path';\nimport * as fs from 'node:fs';\nimport { BrainBank } from '@/brainbank.ts';\nimport { code } from '@/indexers/code/code-plugin.ts';\nimport { git } from '@/indexers/git/git-plugin.ts';\nimport { docs } from '@/indexers/docs/docs-plugin.ts';\nimport type { Indexer } from '@/indexers/base.ts';\nimport { c, getFlag } from './utils.ts';\n\n// ── Types ───────────────────────────────────────────\n\ninterface BrainBankCliConfig {\n    /** Custom indexers to register alongside built-in ones. */\n    indexers?: Indexer[];\n    /** Override which built-in indexers to load. Default: ['code', 'git', 'docs'] */\n    builtins?: ('code' | 'git' | 'docs')[];\n    /** BrainBank constructor options. */\n    brainbank?: Record<string, any>;\n}\n\nconst CONFIG_NAMES = ['config.ts', 'config.js', 'config.mjs'];\nconst INDEXER_EXTENSIONS = ['.ts', '.js', '.mjs'];\n\n// ── Caches ──────────────────────────────────────────\n\nconst NOT_LOADED = Symbol('not-loaded');\nlet _configCache: BrainBankCliConfig | null | typeof NOT_LOADED = NOT_LOADED;\nlet _folderIndexersCache: Indexer[] | typeof NOT_LOADED = NOT_LOADED;\n\n/** Reset factory caches. Useful for tests that import this module multiple times. */\nexport function resetFactoryCache(): void {\n    _configCache = NOT_LOADED;\n    _folderIndexersCache = NOT_LOADED;\n}\n\n// ── Config Loader ───────────────────────────────────\n\n/** Load .brainbank/config.ts if present. */\nasync function loadConfig(): Promise<BrainBankCliConfig | null> {\n    if (_configCache !== NOT_LOADED) return _configCache;\n\n    const repoPath = getFlag('repo') ?? '.';\n    const brainbankDir = path.resolve(repoPath, '.brainbank');\n\n    for (const name of CONFIG_NAMES) {\n        const configPath = path.join(brainbankDir, name);\n        if (fs.existsSync(configPath)) {\n            try {\n                const mod = await import(configPath);\n                _configCache = (mod.default ?? mod) as BrainBankCliConfig;\n                return _configCache;\n            } catch (err: any) {\n                console.error(c.red(`Error loading .brainbank/${name}: ${err.message}`));\n                process.exit(1);\n            }\n        }\n    }\n\n    _configCache = null;\n    return null;\n}\n\n// ── Indexer Discovery ───────────────────────────────\n\n/** Auto-discover indexers from .brainbank/indexers/ folder. */\nasync function discoverFolderIndexers(): Promise<Indexer[]> {\n    if (_folderIndexersCache !== NOT_LOADED) return _folderIndexersCache;\n\n    const repoPath = getFlag('repo') ?? '.';\n    const indexersDir = path.resolve(repoPath, '.brainbank', 'indexers');\n\n    if (!fs.existsSync(indexersDir)) {\n        _folderIndexersCache = [];\n        return [];\n    }\n\n    const files = fs.readdirSync(indexersDir)\n        .filter(f => INDEXER_EXTENSIONS.some(ext => f.endsWith(ext)))\n        .sort();\n\n    const indexers: Indexer[] = [];\n\n    for (const file of files) {\n        const filePath = path.join(indexersDir, file);\n        try {\n            const mod = await import(filePath);\n            const indexer = mod.default ?? mod;\n\n            if (indexer && typeof indexer === 'object' && indexer.name) {\n                indexers.push(indexer as Indexer);\n            } else {\n                console.error(c.yellow(`⚠ ${file}: must export a default Indexer with a 'name' property, skipping`));\n            }\n        } catch (err: any) {\n            console.error(c.red(`Error loading indexer ${file}: ${err.message}`));\n        }\n    }\n\n    _folderIndexersCache = indexers;\n    return indexers;\n}\n\n// ── Multi-repo Detection ────────────────────────────\n\n/** Detect subdirectories that have their own .git repo. */\nfunction detectGitSubdirs(parentPath: string): { name: string; path: string }[] {\n    try {\n        const entries = fs.readdirSync(parentPath, { withFileTypes: true });\n        return entries\n            .filter(e =>\n                e.isDirectory() &&\n                !e.name.startsWith('.') &&\n                !e.name.startsWith('node_modules') &&\n                fs.existsSync(path.join(parentPath, e.name, '.git')),\n            )\n            .map(e => ({ name: e.name, path: path.join(parentPath, e.name) }));\n    } catch {\n        return [];\n    }\n}\n\n// ── Factory ─────────────────────────────────────────\n\n/** Create a BrainBank with built-in + discovered + config indexers. */\nexport async function createBrain(repoPath?: string): Promise<BrainBank> {\n    const rp = repoPath ?? getFlag('repo') ?? '.';\n    const config = await loadConfig();\n    const folderIndexers = await discoverFolderIndexers();\n\n    const brainOpts: Record<string, any> = { repoPath: rp, ...(config?.brainbank ?? {}) };\n    await setupProviders(brainOpts);\n\n    const brain = new BrainBank(brainOpts);\n    const builtins = config?.builtins ?? ['code', 'git', 'docs'];\n    registerBuiltins(brain, rp, builtins);\n\n    for (const indexer of folderIndexers) brain.use(indexer);\n    if (config?.indexers) {\n        for (const indexer of config.indexers) brain.use(indexer);\n    }\n\n    return brain;\n}\n\n/** Configure reranker and embedding provider on brainOpts. */\nasync function setupProviders(brainOpts: Record<string, any>): Promise<void> {\n    const rerankerFlag = getFlag('reranker');\n    if (rerankerFlag === 'qwen3') {\n        const { Qwen3Reranker } = await import('@brainbank/reranker');\n        brainOpts.reranker = new Qwen3Reranker();\n    }\n\n    if (process.env.BRAINBANK_EMBEDDING === 'openai') {\n        const { OpenAIEmbedding } = await import('../providers/embeddings/openai-embedding.ts');\n        const provider = new OpenAIEmbedding();\n        brainOpts.embeddingProvider = provider;\n        brainOpts.embeddingDims = provider.dims;\n    } else if (process.env.BRAINBANK_EMBEDDING === 'perplexity') {\n        const { PerplexityEmbedding } = await import('../providers/embeddings/perplexity-embedding.ts');\n        const provider = new PerplexityEmbedding();\n        brainOpts.embeddingProvider = provider;\n        brainOpts.embeddingDims = provider.dims;\n    } else if (process.env.BRAINBANK_EMBEDDING === 'perplexity-context') {\n        const { PerplexityContextEmbedding } = await import('../providers/embeddings/perplexity-context-embedding.ts');\n        const provider = new PerplexityContextEmbedding();\n        brainOpts.embeddingProvider = provider;\n        brainOpts.embeddingDims = provider.dims;\n    }\n}\n\n/** Register built-in indexers with multi-repo detection. */\nfunction registerBuiltins(\n    brain: BrainBank, rp: string, builtins: ('code' | 'git' | 'docs')[],\n): void {\n    const resolvedRp = path.resolve(rp);\n    const hasRootGit = fs.existsSync(path.join(resolvedRp, '.git'));\n    const gitSubdirs = !hasRootGit ? detectGitSubdirs(resolvedRp) : [];\n\n    if (gitSubdirs.length > 0 && (builtins.includes('code') || builtins.includes('git'))) {\n        console.log(c.cyan(`  Multi-repo: found ${gitSubdirs.length} git repos: ${gitSubdirs.map(d => d.name).join(', ')}`));\n        for (const sub of gitSubdirs) {\n            if (builtins.includes('code')) brain.use(code({ repoPath: sub.path, name: `code:${sub.name}` }));\n            if (builtins.includes('git')) brain.use(git({ repoPath: sub.path, name: `git:${sub.name}` }));\n        }\n    } else {\n        if (builtins.includes('code')) brain.use(code({ repoPath: rp }));\n        if (builtins.includes('git')) brain.use(git());\n    }\n\n    if (builtins.includes('docs')) brain.use(docs());\n}\n","/**\n * brainbank collection add|list|remove — Document collection management\n */\n\nimport { c, args, getFlag, stripFlags } from '@/cli/utils.ts';\nimport { createBrain } from '@/cli/factory.ts';\n\nexport async function cmdCollection(): Promise<void> {\n    const pos = stripFlags(args);\n    const sub = pos[1];\n\n    if (sub === 'add') {\n        const path = pos[2];\n        const name = getFlag('name');\n        const pattern = getFlag('pattern') ?? '**/*.md';\n        const context = getFlag('context');\n        const ignoreRaw = getFlag('ignore');\n\n        if (!path || !name) {\n            console.log(c.red('Usage: brainbank collection add <path> --name <name> [--pattern \"**/*.md\"] [--ignore \"glob\"] [--context \"description\"]'));\n            process.exit(1);\n        }\n\n        const brain = await createBrain();\n        await brain.addCollection({\n            name,\n            path,\n            pattern,\n            ignore: ignoreRaw ? ignoreRaw.split(',') : [],\n            context: context ?? undefined,\n        });\n        console.log(c.green(`✓ Collection '${name}' added: ${path} (${pattern})`));\n        if (context) console.log(c.dim(`  Context: ${context}`));\n        brain.close();\n        return;\n    }\n\n    if (sub === 'list') {\n        const brain = await createBrain();\n        await brain.initialize();\n        const collections = brain.listCollections();\n        if (collections.length === 0) {\n            console.log(c.yellow('  No collections registered.'));\n        } else {\n            console.log(c.bold('\\n━━━ Collections ━━━\\n'));\n            for (const col of collections) {\n                console.log(`  ${c.cyan(col.name)} ${c.dim('→')} ${col.path}`);\n                console.log(`    Pattern: ${col.pattern ?? '**/*.md'}`);\n                if (col.context) console.log(`    Context: ${c.dim(col.context)}`);\n            }\n        }\n        brain.close();\n        return;\n    }\n\n    if (sub === 'remove') {\n        const name = pos[2];\n        if (!name) {\n            console.log(c.red('Usage: brainbank collection remove <name>'));\n            process.exit(1);\n        }\n        const brain = await createBrain();\n        await brain.removeCollection(name);\n        console.log(c.green(`✓ Collection '${name}' removed.`));\n        brain.close();\n        return;\n    }\n\n    console.log(c.red('Usage: brainbank collection <add|list|remove>'));\n    process.exit(1);\n}\n","/**\n * brainbank kv add|search|list|trim|clear — Dynamic KV collection management\n */\n\nimport { c, args, getFlag, stripFlags } from '@/cli/utils.ts';\nimport { createBrain } from '@/cli/factory.ts';\n\nexport async function cmdKv(): Promise<void> {\n    const pos = stripFlags(args);\n    const sub = pos[1];\n\n    // ── add ─────────────────────────────────────────\n    if (sub === 'add') {\n        const collName = pos[2];\n        const content = pos.slice(3).join(' ');\n        const metaRaw = getFlag('meta');\n\n        if (!collName || !content) {\n            console.log(c.red(\"Usage: brainbank kv add <collection> <content> [--meta '{\\\"key\\\":\\\"val\\\"}']\"));\n            process.exit(1);\n        }\n\n        const brain = await createBrain();\n        await brain.initialize();\n        const coll = brain.collection(collName);\n        const meta = metaRaw ? JSON.parse(metaRaw) : {};\n        const id = await coll.add(content, meta);\n        console.log(c.green(`✓ Added item #${id} to '${collName}'`));\n        brain.close();\n        return;\n    }\n\n    // ── search ──────────────────────────────────────\n    if (sub === 'search') {\n        const collName = pos[2];\n        const query = pos.slice(3).join(' ');\n        const k = parseInt(getFlag('k') || '5', 10);\n        const mode = (getFlag('mode') as any) || 'hybrid';\n\n        if (!collName || !query) {\n            console.log(c.red('Usage: brainbank kv search <collection> <query> [--k 5] [--mode hybrid|keyword|vector]'));\n            process.exit(1);\n        }\n\n        const brain = await createBrain();\n        await brain.initialize();\n        const coll = brain.collection(collName);\n        const results = await coll.search(query, { k, mode });\n\n        if (results.length === 0) {\n            console.log(c.yellow('  No results found.'));\n        } else {\n            console.log(c.bold(`\\n━━━ ${collName}: \"${query}\" ━━━\\n`));\n            for (const r of results) {\n                const score = Math.round((r.score ?? 0) * 100);\n                console.log(`  ${c.cyan(`[${score}%]`)} ${r.content}`);\n                if (Object.keys(r.metadata).length > 0) {\n                    console.log(`    ${c.dim(JSON.stringify(r.metadata))}`);\n                }\n            }\n        }\n        brain.close();\n        return;\n    }\n\n    // ── list ────────────────────────────────────────\n    if (sub === 'list') {\n        const collName = pos[2];\n        const limit = parseInt(getFlag('limit') || '20', 10);\n\n        if (!collName) {\n            const brain = await createBrain();\n            await brain.initialize();\n            const names = brain.listCollectionNames();\n            if (names.length === 0) {\n                console.log(c.yellow('  No KV collections found.'));\n            } else {\n                console.log(c.bold('\\n━━━ KV Collections ━━━\\n'));\n                for (const n of names) {\n                    const coll = brain.collection(n);\n                    console.log(`  ${c.cyan(n)} — ${coll.count()} items`);\n                }\n            }\n            brain.close();\n            return;\n        }\n\n        const brain = await createBrain();\n        await brain.initialize();\n        const coll = brain.collection(collName);\n        const items = coll.list({ limit });\n        if (items.length === 0) {\n            console.log(c.yellow(`  Collection '${collName}' is empty.`));\n        } else {\n            console.log(c.bold(`\\n━━━ ${collName} (${coll.count()} items) ━━━\\n`));\n            for (const item of items) {\n                const age = Math.round((Date.now() / 1000 - item.createdAt) / 60);\n                console.log(`  #${item.id} ${c.dim(`(${age}m ago)`)} ${item.content.slice(0, 80)}`);\n            }\n        }\n        brain.close();\n        return;\n    }\n\n    // ── trim ────────────────────────────────────────\n    if (sub === 'trim') {\n        const collName = pos[2];\n        const keep = parseInt(getFlag('keep') || '0', 10);\n\n        if (!collName || keep <= 0) {\n            console.log(c.red('Usage: brainbank kv trim <collection> --keep <n>'));\n            process.exit(1);\n        }\n\n        const brain = await createBrain();\n        await brain.initialize();\n        const coll = brain.collection(collName);\n        const result = await coll.trim({ keep });\n        console.log(c.green(`✓ Trimmed ${result.removed} items from '${collName}' (kept ${keep})`));\n        brain.close();\n        return;\n    }\n\n    // ── clear ───────────────────────────────────────\n    if (sub === 'clear') {\n        const collName = pos[2];\n        if (!collName) {\n            console.log(c.red('Usage: brainbank kv clear <collection>'));\n            process.exit(1);\n        }\n\n        const brain = await createBrain();\n        await brain.initialize();\n        const coll = brain.collection(collName);\n        const before = coll.count();\n        coll.clear();\n        console.log(c.green(`✓ Cleared ${before} items from '${collName}'`));\n        brain.close();\n        return;\n    }\n\n    console.log(c.red('Usage: brainbank kv <add|search|list|trim|clear>'));\n    process.exit(1);\n}\n\n","/**\n * brainbank docs — Index document collections\n * brainbank dsearch — Search documents only\n */\n\nimport { c, args, getFlag, stripFlags } from '@/cli/utils.ts';\nimport { createBrain } from '@/cli/factory.ts';\n\nexport async function cmdDocs(): Promise<void> {\n    const collection = getFlag('collection');\n    const brain = await createBrain();\n\n    console.log(c.bold('\\n━━━ BrainBank Docs Index ━━━\\n'));\n\n    const opts: { collections?: string[]; onProgress?: any } = {};\n    if (collection) opts.collections = [collection];\n    opts.onProgress = (col: string, file: string, cur: number, total: number) => {\n        process.stdout.write(`\\r  ${c.cyan(col)} [${cur}/${total}] ${file}                    `);\n    };\n\n    const results = await brain.indexDocs(opts);\n\n    console.log('\\n');\n    for (const [name, stat] of Object.entries(results)) {\n        console.log(`  ${c.green(name)}: ${stat.indexed} indexed, ${stat.skipped} skipped, ${stat.chunks} chunks`);\n    }\n\n    brain.close();\n}\n\nexport async function cmdDocSearch(): Promise<void> {\n    const query = stripFlags(args).slice(1).join(' ');\n    if (!query) {\n        console.log(c.red('Usage: brainbank dsearch <query>'));\n        process.exit(1);\n    }\n\n    const brain = await createBrain();\n    const collection = getFlag('collection');\n    const k = parseInt(getFlag('k') || '8', 10);\n\n    console.log(c.bold(`\\n━━━ BrainBank Doc Search: \"${query}\" ━━━\\n`));\n\n    const results = await brain.searchDocs(query, { collection: collection ?? undefined, k });\n\n    if (results.length === 0) {\n        console.log(c.yellow('  No results found.'));\n        brain.close();\n        return;\n    }\n\n    for (const r of results) {\n        const score = Math.round(r.score * 100);\n        const ctx = r.context ? ` — ${c.dim(r.context)}` : '';\n        console.log(`${c.magenta(`[DOC ${score}%]`)} ${c.bold(r.filePath!)} [${(r.metadata as any).collection}]${ctx}`);\n        const preview = r.content.split('\\n').slice(0, 4).join('\\n');\n        console.log(c.dim(preview));\n        console.log('');\n    }\n\n    brain.close();\n}\n","/**\n * brainbank search — Semantic search (vector)\n * brainbank hsearch — Hybrid search (vector + BM25)\n * brainbank ksearch — Keyword search (BM25)\n */\n\nimport { c, args, stripFlags, printResults } from '@/cli/utils.ts';\nimport { createBrain } from '@/cli/factory.ts';\n\nexport async function cmdSearch(): Promise<void> {\n    const query = stripFlags(args).slice(1).join(' ');\n    if (!query) {\n        console.log(c.red('Usage: brainbank search <query>'));\n        process.exit(1);\n    }\n\n    const brain = await createBrain();\n    console.log(c.bold(`\\n━━━ BrainBank Search: \"${query}\" ━━━\\n`));\n\n    const results = await brain.search(query);\n    printResults(results);\n    brain.close();\n}\n\nexport async function cmdHybridSearch(): Promise<void> {\n    const query = stripFlags(args).slice(1).join(' ');\n    if (!query) {\n        console.log(c.red('Usage: brainbank hsearch <query>'));\n        process.exit(1);\n    }\n\n    const brain = await createBrain();\n    console.log(c.bold(`\\n━━━ BrainBank Hybrid Search: \"${query}\" ━━━`));\n    console.log(c.dim(`  Mode: vector + BM25 → Reciprocal Rank Fusion\\n`));\n\n    const results = await brain.hybridSearch(query);\n    printResults(results);\n    brain.close();\n}\n\nexport async function cmdKeywordSearch(): Promise<void> {\n    const query = stripFlags(args).slice(1).join(' ');\n    if (!query) {\n        console.log(c.red('Usage: brainbank ksearch <query>'));\n        process.exit(1);\n    }\n\n    const brain = await createBrain();\n    await brain.initialize();\n    console.log(c.bold(`\\n━━━ BrainBank Keyword Search: \"${query}\" ━━━`));\n    console.log(c.dim(`  Mode: BM25 full-text (instant)\\n`));\n\n    const results = await brain.searchBM25(query);\n    printResults(results);\n    brain.close();\n}\n","/**\n * brainbank context <task> — Get formatted context for a task\n * brainbank context add <collection> <path> <description>\n * brainbank context list\n */\n\nimport { c, args, stripFlags } from '@/cli/utils.ts';\nimport { createBrain } from '@/cli/factory.ts';\n\nexport async function cmdContext(): Promise<void> {\n    const pos = stripFlags(args);\n    const sub = pos[1];\n\n    // brainbank context add <collection> <path> <description>\n    if (sub === 'add') {\n        const collection = pos[2];\n        const path = pos[3];\n        const desc = pos.slice(4).join(' ');\n\n        if (!collection || !path || !desc) {\n            console.log(c.red('Usage: brainbank context add <collection> <path> <description>'));\n            process.exit(1);\n        }\n\n        const brain = await createBrain();\n        await brain.initialize();\n        brain.addContext(collection, path, desc);\n        console.log(c.green(`✓ Context added: ${collection}:${path} → \"${desc}\"`));\n        brain.close();\n        return;\n    }\n\n    // brainbank context list\n    if (sub === 'list') {\n        const brain = await createBrain();\n        await brain.initialize();\n        const contexts = brain.listContexts();\n        if (contexts.length === 0) {\n            console.log(c.yellow('  No contexts configured.'));\n        } else {\n            console.log(c.bold('\\n━━━ Contexts ━━━\\n'));\n            for (const ctx of contexts) {\n                console.log(`  ${c.cyan(ctx.collection)}:${ctx.path} → ${c.dim(ctx.context)}`);\n            }\n        }\n        brain.close();\n        return;\n    }\n\n    // brainbank context <task> — get formatted context\n    const task = stripFlags(args).slice(1).join(' ');\n    if (!task) {\n        console.log(c.red('Usage: brainbank context <task description>'));\n        console.log(c.dim('       brainbank context add <collection> <path> <description>'));\n        console.log(c.dim('       brainbank context list'));\n        process.exit(1);\n    }\n\n    const brain = await createBrain();\n    const context = await brain.getContext(task);\n    console.log(context);\n    brain.close();\n}\n","/**\n * brainbank stats    — Show index statistics\n * brainbank reembed  — Re-embed all vectors\n * brainbank watch    — Watch for file changes\n * brainbank serve    — Start MCP server\n */\n\nimport { c } from '@/cli/utils.ts';\nimport { createBrain } from '@/cli/factory.ts';\n\n// ── Stats ───────────────────────────────────────────\n\nexport async function cmdStats(): Promise<void> {\n    const brain = await createBrain();\n    await brain.initialize();\n\n    const s = brain.stats();\n\n    console.log(c.bold('\\n━━━ BrainBank Stats ━━━\\n'));\n    console.log(`  ${c.cyan('Indexers')}: ${brain.indexers.join(', ')}\\n`);\n\n    if (s.code) {\n        console.log(`  ${c.cyan('Code')}`);\n        console.log(`    Files indexed:  ${s.code.files}`);\n        console.log(`    Code chunks:    ${s.code.chunks}`);\n        console.log(`    HNSW vectors:   ${s.code.hnswSize}`);\n        console.log('');\n    }\n\n    if (s.git) {\n        console.log(`  ${c.cyan('Git History')}`);\n        console.log(`    Commits:        ${s.git.commits}`);\n        console.log(`    Files tracked:  ${s.git.filesTracked}`);\n        console.log(`    Co-edit pairs:  ${s.git.coEdits}`);\n        console.log(`    HNSW vectors:   ${s.git.hnswSize}`);\n        console.log('');\n    }\n\n    if (s.documents) {\n        console.log(`  ${c.cyan('Documents')}`);\n        console.log(`    Collections:    ${s.documents.collections}`);\n        console.log(`    Documents:      ${s.documents.documents}`);\n        console.log(`    Chunks:         ${s.documents.chunks}`);\n        console.log(`    HNSW vectors:   ${s.documents.hnswSize}`);\n        console.log('');\n    }\n\n    // KV collections\n    const kvNames = brain.listCollectionNames();\n    if (kvNames.length > 0) {\n        console.log(`  ${c.cyan('KV Collections')}`);\n        for (const name of kvNames) {\n            const coll = brain.collection(name);\n            console.log(`    ${name}: ${coll.count()} items`);\n        }\n        console.log('');\n    }\n\n    brain.close();\n}\n\n// ── Re-embed ────────────────────────────────────────\n\nexport async function cmdReembed(): Promise<void> {\n    const brain = await createBrain();\n    await brain.initialize();\n\n    console.log(c.bold('\\n━━━ BrainBank Re-embed ━━━\\n'));\n    console.log(c.dim('  Regenerating vectors with current embedding provider...'));\n    console.log(c.dim('  Text, FTS, and metadata remain unchanged.\\n'));\n\n    const result = await brain.reembed({\n        onProgress: (table, current, total) => {\n            process.stdout.write(`\\r  ${c.cyan(table.padEnd(8))} ${current}/${total}`);\n        },\n    });\n\n    console.log('\\n');\n    if (result.code > 0)   console.log(`  ${c.green('✓')} Code:    ${result.code} vectors`);\n    if (result.git > 0)    console.log(`  ${c.green('✓')} Git:     ${result.git} vectors`);\n    if (result.docs > 0)   console.log(`  ${c.green('✓')} Docs:    ${result.docs} vectors`);\n    if (result.kv > 0)     console.log(`  ${c.green('✓')} KV:      ${result.kv} vectors`);\n    if (result.notes > 0)  console.log(`  ${c.green('✓')} Notes:   ${result.notes} vectors`);\n    if (result.memory > 0) console.log(`  ${c.green('✓')} Memory:  ${result.memory} vectors`);\n    console.log(`\\n  ${c.bold('Total')}: ${result.total} vectors regenerated\\n`);\n\n    brain.close();\n}\n\n// ── Watch ───────────────────────────────────────────\n\nexport async function cmdWatch(): Promise<void> {\n    const brain = await createBrain();\n    await brain.initialize();\n\n    console.log(c.bold('\\n━━━ BrainBank Watch ━━━\\n'));\n    console.log(c.dim(`  Watching ${brain.config.repoPath} for changes...`));\n    console.log(c.dim('  Press Ctrl+C to stop.\\n'));\n\n    const watcher = brain.watch({\n        debounceMs: 2000,\n        onIndex: (file, indexer) => {\n            const ts = new Date().toLocaleTimeString();\n            console.log(`  ${c.dim(ts)} ${c.green('✓')} ${c.cyan(indexer)}: ${file}`);\n        },\n        onError: (err) => {\n            console.error(`  ${c.red('✗')} ${err.message}`);\n        },\n    });\n\n    // Keep process alive, clean up on Ctrl+C\n    process.on('SIGINT', () => {\n        console.log(c.dim('\\n  Stopping watcher...'));\n        watcher.close();\n        brain.close();\n        process.exit(0);\n    });\n\n    await new Promise(() => {});\n}\n\n// ── Serve ───────────────────────────────────────────\n\nexport async function cmdServe(): Promise<void> {\n    await import('@brainbank/mcp');\n}\n\n// ── Help ────────────────────────────────────────────\n\nexport function showHelp(): void {\n    console.log(c.bold('\\n━━━ BrainBank — Semantic Knowledge Bank ━━━\\n'));\n    console.log(c.bold('Indexing:'));\n    console.log(`  ${c.cyan('index')} [path]                      Index code + git history`);\n    console.log(`  ${c.cyan('collection add')} <path> --name      Add a document collection`);\n    console.log(`  ${c.cyan('collection list')}                    List collections`);\n    console.log(`  ${c.cyan('collection remove')} <name>           Remove a collection`);\n    console.log(`  ${c.cyan('docs')} [--collection <name>]         Index document collections`);\n    console.log('');\n    console.log(c.bold('Search:'));\n    console.log(`  ${c.cyan('search')} <query>                     Semantic search (vector)`);\n    console.log(`  ${c.cyan('hsearch')} <query>                    Hybrid search (${c.bold('best quality')})`);\n    console.log(`  ${c.cyan('ksearch')} <query>                    Keyword search (BM25, instant)`);\n    console.log(`  ${c.cyan('dsearch')} <query>                    Document search`);\n    console.log('');\n    console.log(c.bold('Context:'));\n    console.log(`  ${c.cyan('context')} <task>                     Get formatted context for a task`);\n    console.log(`  ${c.cyan('context add')} <col> <path> <desc>    Add context metadata`);\n    console.log(`  ${c.cyan('context list')}                       List all context metadata`);\n    console.log('');\n    console.log(c.bold('KV Store:'));\n    console.log(`  ${c.cyan('kv add')} <coll> <content>            Add item to a collection`);\n    console.log(`  ${c.cyan('kv search')} <coll> <query>           Search a collection`);\n    console.log(`  ${c.cyan('kv list')} [coll]                     List collections or items`);\n    console.log(`  ${c.cyan('kv trim')} <coll> --keep <n>          Keep only N most recent`);\n    console.log(`  ${c.cyan('kv clear')} <coll>                    Clear all items`);\n    console.log('');\n    console.log(c.bold('Utility:'));\n    console.log(`  ${c.cyan('stats')}                              Show index statistics`);\n    console.log(`  ${c.cyan('reembed')}                            Re-embed all vectors`);\n    console.log(`  ${c.cyan('watch')}                              Watch files, auto-re-index`);\n    console.log(`  ${c.cyan('serve')}                              Start MCP server (stdio)`);\n    console.log('');\n    console.log(c.bold('Options:'));\n    console.log(`  ${c.dim('--repo <path>')}           Repository path (default: .)`);\n    console.log(`  ${c.dim('--force')}                 Force re-index all files`);\n    console.log(`  ${c.dim('--depth <n>')}             Git history depth (default: 500)`);\n    console.log(`  ${c.dim('--collection <name>')}     Filter by collection`);\n    console.log(`  ${c.dim('--pattern <glob>')}        Collection glob (default: **/*.md)`);\n    console.log(`  ${c.dim('--context <desc>')}        Context description`);\n    console.log(`  ${c.dim('--reranker <name>')}       Reranker to use (qwen3)`);\n    console.log('');\n    console.log(c.bold('Examples:'));\n    console.log(c.dim('  brainbank index .'));\n    console.log(c.dim('  brainbank kv add errors \"Fixed null pointer in api.ts\"'));\n    console.log(c.dim('  brainbank kv search errors \"null pointer\"'));\n    console.log(c.dim('  brainbank kv list'));\n    console.log(c.dim('  brainbank hsearch \"authentication middleware\"'));\n    console.log(c.dim('  brainbank context \"add rate limiting to the API\"'));\n    console.log(c.dim('  brainbank serve'));\n}\n","#!/usr/bin/env node\n\n/**\n * BrainBank — CLI Entry Point\n *\n * Dispatcher that routes commands to their handler modules.\n */\n\nimport { args, c } from './utils.ts';\nimport { cmdIndex } from './commands/index-cmd.ts';\nimport { cmdCollection } from './commands/collection.ts';\nimport { cmdKv } from './commands/kv.ts';\nimport { cmdDocs, cmdDocSearch } from './commands/docs.ts';\nimport { cmdSearch, cmdHybridSearch, cmdKeywordSearch } from './commands/search.ts';\nimport { cmdContext } from './commands/context.ts';\nimport { cmdStats, cmdReembed, cmdWatch, cmdServe, showHelp } from './commands/system.ts';\n\nconst command = args[0];\n\nasync function main(): Promise<void> {\n    switch (command) {\n        case 'index':       return cmdIndex();\n        case 'collection':  return cmdCollection();\n        case 'kv':          return cmdKv();\n        case 'docs':        return cmdDocs();\n        case 'dsearch':     return cmdDocSearch();\n        case 'search':      return cmdSearch();\n        case 'hsearch':     return cmdHybridSearch();\n        case 'ksearch':     return cmdKeywordSearch();\n        case 'context':     return cmdContext();\n        case 'stats':       return cmdStats();\n        case 'reembed':     return cmdReembed();\n        case 'watch':       return cmdWatch();\n        case 'serve':       return cmdServe();\n        case 'help':\n        case '--help':\n        case '-h':\n            showHelp();\n            break;\n        default:\n            if (command) console.log(c.red(`Unknown command: ${command}\\n`));\n            showHelp();\n            process.exit(command ? 1 : 0);\n    }\n}\n\nmain().catch(err => {\n    console.error(c.red(`Error: ${err.message}`));\n    if (process.env.BRAINBANK_DEBUG) console.error(err.stack);\n    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+{"version":3,"sources":["../src/cli/utils.ts","../src/cli/commands/index-cmd.ts","../src/cli/factory.ts","../src/cli/commands/collection.ts","../src/cli/commands/kv.ts","../src/cli/commands/docs.ts","../src/cli/commands/search.ts","../src/cli/commands/context.ts","../src/cli/commands/system.ts","../src/cli/index.ts"],"sourcesContent":["/**\n * BrainBank CLI — Shared Utilities\n *\n * Colors, argument parsing, and result formatting.\n * No BrainBank imports — pure Node.js / terminal helpers.\n */\n\n// ── Colors ──────────────────────────────────────────\n\nexport const c = {\n    green:   (s: string) => `\\x1b[32m${s}\\x1b[0m`,\n    red:     (s: string) => `\\x1b[31m${s}\\x1b[0m`,\n    yellow:  (s: string) => `\\x1b[33m${s}\\x1b[0m`,\n    cyan:    (s: string) => `\\x1b[36m${s}\\x1b[0m`,\n    dim:     (s: string) => `\\x1b[2m${s}\\x1b[0m`,\n    bold:    (s: string) => `\\x1b[1m${s}\\x1b[0m`,\n    magenta: (s: string) => `\\x1b[35m${s}\\x1b[0m`,\n};\n\n// ── Argument Parsing ────────────────────────────────\n\n/** Raw argv, sliced past the Node binary and script path. */\nexport const args = process.argv.slice(2);\n\nexport function getFlag(name: string): string | undefined {\n    const idx = args.indexOf(`--${name}`);\n    return idx >= 0 ? args[idx + 1] : undefined;\n}\n\nexport function hasFlag(name: string): boolean {\n    return args.includes(`--${name}`);\n}\n\n/** Known flags that take a value (--flag <value>). */\nconst VALUE_FLAGS = new Set([\n    'repo', 'depth', 'collection', 'pattern', 'context', 'name',\n    'keep', 'reranker', 'only', 'docs',\n    'ignore', 'meta', 'k', 'mode', 'limit',\n]);\n\n/**\n * Strip all --flags AND their values from an argv slice.\n * Returns only positional arguments.\n *\n *   stripFlags(['ksearch', 'auth', '--repo', '/path'])\n *   → ['ksearch', 'auth']\n */\nexport function stripFlags(argv: string[]): string[] {\n    const result: string[] = [];\n    for (let i = 0; i < argv.length; i++) {\n        if (argv[i].startsWith('--')) {\n            const name = argv[i].slice(2);\n            if (VALUE_FLAGS.has(name)) i++; // skip next (the value)\n            continue;\n        }\n        result.push(argv[i]);\n    }\n    return result;\n}\n\n// ── Result Printer ──────────────────────────────────\n\nexport function printResults(results: any[]): void {\n    if (results.length === 0) {\n        console.log(c.yellow('  No results found.'));\n        return;\n    }\n\n    for (const r of results) {\n        const score = Math.round(r.score * 100);\n\n        if (r.type === 'code') {\n            const m = r.metadata;\n            console.log(\n                `${c.green(`[CODE ${score}%]`)} ${c.bold(r.filePath!)} — ` +\n                `${m.name || m.chunkType} ${c.dim(`L${m.startLine}-${m.endLine}`)}`,\n            );\n            console.log(c.dim(r.content.split('\\n').slice(0, 5).join('\\n')));\n            console.log('');\n        } else if (r.type === 'commit') {\n            const m = r.metadata;\n            console.log(\n                `${c.cyan(`[COMMIT ${score}%]`)} ${c.bold(m.shortHash)} ` +\n                `${r.content} ${c.dim(`(${m.author})`)}`,\n            );\n            if (m.files?.length) console.log(c.dim(`  Files: ${m.files.slice(0, 4).join(', ')}`));\n            console.log('');\n        } else if (r.type === 'document') {\n            const ctx = r.context ? ` — ${c.dim(r.context)}` : '';\n            console.log(\n                `${c.magenta(`[DOC ${score}%]`)} ${c.bold(r.filePath!)} ` +\n                `[${r.metadata.collection}]${ctx}`,\n            );\n            console.log(c.dim(r.content.split('\\n').slice(0, 4).join('\\n')));\n            console.log('');\n        }\n    }\n}\n","/**\n * brainbank index [path] — Index code + git + docs\n */\n\nimport * as path from 'node:path';\nimport { c, args, getFlag, hasFlag } from '@/cli/utils.ts';\nimport { createBrain, getConfig, registerConfigCollections } from '@/cli/factory.ts';\n\nexport async function cmdIndex(): Promise<void> {\n    const repoPath = args[1] || '.';\n    const force = hasFlag('force');\n    const depth = parseInt(getFlag('depth') || '500', 10);\n    const onlyRaw = getFlag('only');\n    const docsPath = getFlag('docs');\n    const modules = onlyRaw\n        ? onlyRaw.split(',').map(s => s.trim()) as ('code' | 'git' | 'docs')[]\n        : undefined;\n\n    // If --docs is passed, auto-include 'docs' in modules\n    if (docsPath && modules && !modules.includes('docs')) {\n        modules.push('docs');\n    }\n\n    console.log(c.bold('\\n━━━ BrainBank Index ━━━'));\n    console.log(c.dim(`  Repo: ${repoPath}`));\n    console.log(c.dim(`  Force: ${force}`));\n    console.log(c.dim(`  Git depth: ${depth}`));\n    if (modules) console.log(c.dim(`  Modules: ${modules.join(', ')}`));\n    if (docsPath) console.log(c.dim(`  Docs path: ${docsPath}`));\n\n    const brain = await createBrain(repoPath);\n\n    // Auto-register docs collections from config.json\n    const config = await getConfig();\n    await registerConfigCollections(brain, config);\n\n    // Auto-register docs collection from --docs CLI flag\n    if (docsPath) {\n        const absDocsPath = path.resolve(docsPath);\n        const collName = path.basename(absDocsPath);\n        try {\n            await brain.addCollection({\n                name: collName,\n                path: absDocsPath,\n                pattern: '**/*.md',\n                ignore: ['deprecated/**', 'node_modules/**'],\n            });\n            console.log(c.dim(`  Registered docs collection: ${collName}`));\n        } catch {\n            console.log(c.yellow(`  Warning: docs module not loaded, skipping --docs`));\n        }\n    }\n\n    const result = await brain.index({\n        modules,\n        forceReindex: force,\n        gitDepth: depth,\n        onProgress: (stage, msg) => {\n            process.stdout.write(`\\r  ${c.cyan(stage.toUpperCase())} ${msg}                    `);\n        },\n    });\n\n    console.log('\\n');\n    if (result.code) {\n        console.log(`  ${c.green('Code')}: ${result.code.indexed} indexed, ${result.code.skipped} skipped, ${result.code.chunks ?? 0} chunks`);\n    }\n    if (result.git) {\n        console.log(`  ${c.green('Git')}:  ${result.git.indexed} indexed, ${result.git.skipped} skipped`);\n    }\n    if (result.docs) {\n        for (const [name, stat] of Object.entries(result.docs)) {\n            console.log(`  ${c.green('Docs')}: [${name}] ${stat.indexed} indexed, ${stat.skipped} skipped, ${stat.chunks} chunks`);\n        }\n    }\n\n    const stats = brain.stats();\n    console.log(`\\n  ${c.bold('Totals')}:`);\n    if (stats.code) console.log(`    Code chunks:  ${stats.code.chunks}`);\n    if (stats.git) console.log(`    Git commits:  ${stats.git.commits}`);\n    if (stats.git) console.log(`    Co-edit pairs: ${stats.git.coEdits}`);\n    if (stats.documents) console.log(`    Documents:    ${stats.documents.documents}`);\n\n    brain.close();\n}\n","/**\n * BrainBank CLI — Brain Factory\n *\n * Creates a configured BrainBank instance with built-in indexers,\n * auto-discovered indexers, and config file support.\n *\n * Config priority: CLI flags > .brainbank/config.json > .brainbank/config.ts > defaults.\n */\n\nimport * as path from 'node:path';\nimport * as fs from 'node:fs';\nimport { BrainBank } from '@/brainbank.ts';\nimport { code } from '@/indexers/code/code-plugin.ts';\nimport { git } from '@/indexers/git/git-plugin.ts';\nimport { docs } from '@/indexers/docs/docs-plugin.ts';\nimport type { Plugin } from '@/indexers/base.ts';\nimport type { EmbeddingProvider, DocumentCollection } from '@/types.ts';\nimport { c, getFlag } from './utils.ts';\n\n// ── Types ───────────────────────────────────────────\n\n/** Per-plugin config section (shared shape). */\ninterface PluginConfig {\n    /** Embedding provider key: \"local\", \"openai\", \"perplexity\", \"perplexity-context\". */\n    embedding?: string;\n}\n\n/** Code plugin config. */\ninterface CodeConfig extends PluginConfig {\n    maxFileSize?: number;\n}\n\n/** Git plugin config. */\ninterface GitConfig extends PluginConfig {\n    depth?: number;\n    maxDiffBytes?: number;\n}\n\n/** Docs plugin config. */\ninterface DocsConfig extends PluginConfig {\n    collections?: DocumentCollection[];\n}\n\n/** Full .brainbank/config.json schema. */\nexport interface ProjectConfig {\n    /** Which built-in plugins to load. Default: [\"code\", \"git\", \"docs\"] */\n    plugins?: ('code' | 'git' | 'docs')[];\n\n    /** Per-plugin config sections. */\n    code?: CodeConfig;\n    git?: GitConfig;\n    docs?: DocsConfig;\n\n    /** Global embedding provider key (default for all plugins). */\n    embedding?: string;\n    /** Reranker: \"none\" or \"qwen3\". */\n    reranker?: string;\n    /** Max file size in bytes. */\n    maxFileSize?: number;\n\n    // --- Legacy .ts config fields (still supported) ---\n    /** @deprecated Use \"plugins\" instead. */\n    builtins?: ('code' | 'git' | 'docs')[];\n    /** Custom plugin instances (only from .ts config). */\n    indexers?: Plugin[];\n    /** BrainBank constructor options. */\n    brainbank?: Record<string, any>;\n\n    /** Any other plugin name → config (for custom plugins). */\n    [pluginName: string]: any;\n}\n\nconst CONFIG_NAMES = ['config.json', 'config.ts', 'config.js', 'config.mjs'];\nconst INDEXER_EXTENSIONS = ['.ts', '.js', '.mjs'];\n\n// ── Caches ──────────────────────────────────────────\n\nconst NOT_LOADED = Symbol('not-loaded');\nlet _configCache: ProjectConfig | null | typeof NOT_LOADED = NOT_LOADED;\nlet _folderPluginsCache: Plugin[] | typeof NOT_LOADED = NOT_LOADED;\n\n/** Reset factory caches. Useful for tests that import this module multiple times. */\nexport function resetFactoryCache(): void {\n    _configCache = NOT_LOADED;\n    _folderPluginsCache = NOT_LOADED;\n}\n\n// ── Config Loader ───────────────────────────────────\n\n/** Load .brainbank/config.json (or .ts fallback) if present. */\nasync function loadConfig(): Promise<ProjectConfig | null> {\n    if (_configCache !== NOT_LOADED) return _configCache;\n\n    const repoPath = getFlag('repo') ?? '.';\n    const brainbankDir = path.resolve(repoPath, '.brainbank');\n\n    for (const name of CONFIG_NAMES) {\n        const configPath = path.join(brainbankDir, name);\n        if (!fs.existsSync(configPath)) continue;\n\n        try {\n            if (name === 'config.json') {\n                const raw = fs.readFileSync(configPath, 'utf-8');\n                _configCache = JSON.parse(raw) as ProjectConfig;\n            } else {\n                const mod = await import(configPath);\n                _configCache = (mod.default ?? mod) as ProjectConfig;\n            }\n            return _configCache;\n        } catch (err: any) {\n            console.error(c.red(`Error loading .brainbank/${name}: ${err.message}`));\n            process.exit(1);\n        }\n    }\n\n    _configCache = null;\n    return null;\n}\n\n/** Get the loaded config (for use by commands). */\nexport async function getConfig(): Promise<ProjectConfig | null> {\n    return loadConfig();\n}\n\n// ── Embedding Resolver ─────────────────────────────\n\n/** Resolve an embedding key string to an EmbeddingProvider instance. */\nasync function resolveEmbeddingKey(key: string): Promise<EmbeddingProvider> {\n    const { resolveEmbedding } = await import('@/providers/embeddings/resolve.ts');\n    return resolveEmbedding(key);\n}\n\n// ── Plugin Discovery ───────────────────────────────\n\n/** Auto-discover indexers from .brainbank/indexers/ folder. */\nasync function discoverFolderPlugins(): Promise<Plugin[]> {\n    if (_folderPluginsCache !== NOT_LOADED) return _folderPluginsCache;\n\n    const repoPath = getFlag('repo') ?? '.';\n    const indexersDir = path.resolve(repoPath, '.brainbank', 'indexers');\n\n    if (!fs.existsSync(indexersDir)) {\n        _folderPluginsCache = [];\n        return [];\n    }\n\n    const files = fs.readdirSync(indexersDir)\n        .filter(f => INDEXER_EXTENSIONS.some(ext => f.endsWith(ext)))\n        .sort();\n\n    const indexers: Plugin[] = [];\n\n    for (const file of files) {\n        const filePath = path.join(indexersDir, file);\n        try {\n            const mod = await import(filePath);\n            const indexer = mod.default ?? mod;\n\n            if (indexer && typeof indexer === 'object' && indexer.name) {\n                indexers.push(indexer as Plugin);\n            } else {\n                console.error(c.yellow(`⚠ ${file}: must export a default Plugin with a 'name' property, skipping`));\n            }\n        } catch (err: any) {\n            console.error(c.red(`Error loading indexer ${file}: ${err.message}`));\n        }\n    }\n\n    _folderPluginsCache = indexers;\n    return indexers;\n}\n\n// ── Multi-repo Detection ────────────────────────────\n\n/** Detect subdirectories that have their own .git repo. */\nfunction detectGitSubdirs(parentPath: string): { name: string; path: string }[] {\n    try {\n        const entries = fs.readdirSync(parentPath, { withFileTypes: true });\n        return entries\n            .filter(e =>\n                e.isDirectory() &&\n                !e.name.startsWith('.') &&\n                !e.name.startsWith('node_modules') &&\n                fs.existsSync(path.join(parentPath, e.name, '.git')),\n            )\n            .map(e => ({ name: e.name, path: path.join(parentPath, e.name) }));\n    } catch {\n        return [];\n    }\n}\n\n// ── Factory ─────────────────────────────────────────\n\n/** Create a BrainBank with built-in + discovered + config indexers. */\nexport async function createBrain(repoPath?: string): Promise<BrainBank> {\n    const rp = repoPath ?? getFlag('repo') ?? '.';\n    const config = await loadConfig();\n    const folderIndexers = await discoverFolderPlugins();\n\n    const brainOpts: Record<string, any> = { repoPath: rp, ...(config?.brainbank ?? {}) };\n\n    // Apply global config options\n    if (config?.maxFileSize) brainOpts.maxFileSize = config.maxFileSize;\n\n    await setupProviders(brainOpts, config);\n\n    const brain = new BrainBank(brainOpts);\n    const builtins = config?.plugins ?? config?.builtins ?? ['code', 'git', 'docs'];\n    await registerBuiltins(brain, rp, builtins, config);\n\n    // Register custom plugins from .brainbank/indexers/\n    for (const indexer of folderIndexers) brain.use(indexer);\n\n    // Register custom plugins from config.ts (programmatic)\n    if (config?.indexers) {\n        for (const indexer of config.indexers) brain.use(indexer);\n    }\n\n    return brain;\n}\n\n/** Configure reranker and global embedding provider. */\nasync function setupProviders(brainOpts: Record<string, any>, config: ProjectConfig | null): Promise<void> {\n    // Reranker: CLI flag > config > default\n    const rerankerFlag = getFlag('reranker') ?? config?.reranker;\n    if (rerankerFlag === 'qwen3') {\n        const { Qwen3Reranker } = await import('@/providers/rerankers/qwen3-reranker.ts');\n        brainOpts.reranker = new Qwen3Reranker();\n    }\n\n    // Embedding: CLI flag > config > auto-resolve from DB\n    const embFlag = getFlag('embedding') ?? config?.embedding;\n    if (embFlag) {\n        const provider = await resolveEmbeddingKey(embFlag);\n        brainOpts.embeddingProvider = provider;\n        brainOpts.embeddingDims = provider.dims;\n    }\n    // If no flag and no config → Initializer reads provider_key from DB → falls back to local\n}\n\n/** Register built-in indexers with multi-repo detection and per-plugin embedding. */\nasync function registerBuiltins(\n    brain: BrainBank, rp: string, builtins: ('code' | 'git' | 'docs')[], config: ProjectConfig | null,\n): Promise<void> {\n    const resolvedRp = path.resolve(rp);\n    const hasRootGit = fs.existsSync(path.join(resolvedRp, '.git'));\n    const gitSubdirs = !hasRootGit ? detectGitSubdirs(resolvedRp) : [];\n\n    // Resolve per-plugin embeddings from config\n    const codeEmb = config?.code?.embedding ? await resolveEmbeddingKey(config.code.embedding) : undefined;\n    const gitEmb = config?.git?.embedding ? await resolveEmbeddingKey(config.git.embedding) : undefined;\n    const docsEmb = config?.docs?.embedding ? await resolveEmbeddingKey(config.docs.embedding) : undefined;\n\n    if (gitSubdirs.length > 0 && (builtins.includes('code') || builtins.includes('git'))) {\n        console.log(c.cyan(`  Multi-repo: found ${gitSubdirs.length} git repos: ${gitSubdirs.map(d => d.name).join(', ')}`));\n        for (const sub of gitSubdirs) {\n            if (builtins.includes('code')) {\n                brain.use(code({\n                    repoPath: sub.path,\n                    name: `code:${sub.name}`,\n                    embeddingProvider: codeEmb,\n                    maxFileSize: config?.code?.maxFileSize,\n                }));\n            }\n            if (builtins.includes('git')) {\n                brain.use(git({\n                    repoPath: sub.path,\n                    name: `git:${sub.name}`,\n                    embeddingProvider: gitEmb,\n                    depth: config?.git?.depth,\n                    maxDiffBytes: config?.git?.maxDiffBytes,\n                }));\n            }\n        }\n    } else {\n        if (builtins.includes('code')) {\n            brain.use(code({\n                repoPath: rp,\n                embeddingProvider: codeEmb,\n                maxFileSize: config?.code?.maxFileSize,\n            }));\n        }\n        if (builtins.includes('git')) {\n            brain.use(git({\n                embeddingProvider: gitEmb,\n                depth: config?.git?.depth,\n                maxDiffBytes: config?.git?.maxDiffBytes,\n            }));\n        }\n    }\n\n    if (builtins.includes('docs')) {\n        brain.use(docs({ embeddingProvider: docsEmb }));\n    }\n}\n\n/** Register doc collections from config. Call after brain.initialize(). */\nexport async function registerConfigCollections(brain: BrainBank, config: ProjectConfig | null): Promise<void> {\n    const collections = config?.docs?.collections;\n    if (!collections?.length) return;\n\n    for (const coll of collections) {\n        const absPath = path.resolve(coll.path);\n        try {\n            await brain.addCollection({\n                name: coll.name,\n                path: absPath,\n                pattern: coll.pattern ?? '**/*.md',\n                ignore: coll.ignore,\n                context: coll.context,\n            });\n        } catch {\n            // Collection already registered — skip\n        }\n    }\n}\n","/**\n * brainbank collection add|list|remove — Document collection management\n */\n\nimport { c, args, getFlag, stripFlags } from '@/cli/utils.ts';\nimport { createBrain } from '@/cli/factory.ts';\n\nexport async function cmdCollection(): Promise<void> {\n    const pos = stripFlags(args);\n    const sub = pos[1];\n\n    if (sub === 'add') {\n        const path = pos[2];\n        const name = getFlag('name');\n        const pattern = getFlag('pattern') ?? '**/*.md';\n        const context = getFlag('context');\n        const ignoreRaw = getFlag('ignore');\n\n        if (!path || !name) {\n            console.log(c.red('Usage: brainbank collection add <path> --name <name> [--pattern \"**/*.md\"] [--ignore \"glob\"] [--context \"description\"]'));\n            process.exit(1);\n        }\n\n        const brain = await createBrain();\n        await brain.addCollection({\n            name,\n            path,\n            pattern,\n            ignore: ignoreRaw ? ignoreRaw.split(',') : [],\n            context: context ?? undefined,\n        });\n        console.log(c.green(`✓ Collection '${name}' added: ${path} (${pattern})`));\n        if (context) console.log(c.dim(`  Context: ${context}`));\n        brain.close();\n        return;\n    }\n\n    if (sub === 'list') {\n        const brain = await createBrain();\n        await brain.initialize();\n        const collections = brain.listCollections();\n        if (collections.length === 0) {\n            console.log(c.yellow('  No collections registered.'));\n        } else {\n            console.log(c.bold('\\n━━━ Collections ━━━\\n'));\n            for (const col of collections) {\n                console.log(`  ${c.cyan(col.name)} ${c.dim('→')} ${col.path}`);\n                console.log(`    Pattern: ${col.pattern ?? '**/*.md'}`);\n                if (col.context) console.log(`    Context: ${c.dim(col.context)}`);\n            }\n        }\n        brain.close();\n        return;\n    }\n\n    if (sub === 'remove') {\n        const name = pos[2];\n        if (!name) {\n            console.log(c.red('Usage: brainbank collection remove <name>'));\n            process.exit(1);\n        }\n        const brain = await createBrain();\n        await brain.removeCollection(name);\n        console.log(c.green(`✓ Collection '${name}' removed.`));\n        brain.close();\n        return;\n    }\n\n    console.log(c.red('Usage: brainbank collection <add|list|remove>'));\n    process.exit(1);\n}\n","/**\n * brainbank kv add|search|list|trim|clear — Dynamic KV collection management\n */\n\nimport { c, args, getFlag, stripFlags } from '@/cli/utils.ts';\nimport { createBrain } from '@/cli/factory.ts';\n\nexport async function cmdKv(): Promise<void> {\n    const pos = stripFlags(args);\n    const sub = pos[1];\n\n    // ── add ─────────────────────────────────────────\n    if (sub === 'add') {\n        const collName = pos[2];\n        const content = pos.slice(3).join(' ');\n        const metaRaw = getFlag('meta');\n\n        if (!collName || !content) {\n            console.log(c.red(\"Usage: brainbank kv add <collection> <content> [--meta '{\\\"key\\\":\\\"val\\\"}']\"));\n            process.exit(1);\n        }\n\n        const brain = await createBrain();\n        await brain.initialize();\n        const coll = brain.collection(collName);\n        const meta = metaRaw ? JSON.parse(metaRaw) : {};\n        const id = await coll.add(content, meta);\n        console.log(c.green(`✓ Added item #${id} to '${collName}'`));\n        brain.close();\n        return;\n    }\n\n    // ── search ──────────────────────────────────────\n    if (sub === 'search') {\n        const collName = pos[2];\n        const query = pos.slice(3).join(' ');\n        const k = parseInt(getFlag('k') || '5', 10);\n        const mode = (getFlag('mode') as any) || 'hybrid';\n\n        if (!collName || !query) {\n            console.log(c.red('Usage: brainbank kv search <collection> <query> [--k 5] [--mode hybrid|keyword|vector]'));\n            process.exit(1);\n        }\n\n        const brain = await createBrain();\n        await brain.initialize();\n        const coll = brain.collection(collName);\n        const results = await coll.search(query, { k, mode });\n\n        if (results.length === 0) {\n            console.log(c.yellow('  No results found.'));\n        } else {\n            console.log(c.bold(`\\n━━━ ${collName}: \"${query}\" ━━━\\n`));\n            for (const r of results) {\n                const score = Math.round((r.score ?? 0) * 100);\n                console.log(`  ${c.cyan(`[${score}%]`)} ${r.content}`);\n                if (Object.keys(r.metadata).length > 0) {\n                    console.log(`    ${c.dim(JSON.stringify(r.metadata))}`);\n                }\n            }\n        }\n        brain.close();\n        return;\n    }\n\n    // ── list ────────────────────────────────────────\n    if (sub === 'list') {\n        const collName = pos[2];\n        const limit = parseInt(getFlag('limit') || '20', 10);\n\n        if (!collName) {\n            const brain = await createBrain();\n            await brain.initialize();\n            const names = brain.listCollectionNames();\n            if (names.length === 0) {\n                console.log(c.yellow('  No KV collections found.'));\n            } else {\n                console.log(c.bold('\\n━━━ KV Collections ━━━\\n'));\n                for (const n of names) {\n                    const coll = brain.collection(n);\n                    console.log(`  ${c.cyan(n)} — ${coll.count()} items`);\n                }\n            }\n            brain.close();\n            return;\n        }\n\n        const brain = await createBrain();\n        await brain.initialize();\n        const coll = brain.collection(collName);\n        const items = coll.list({ limit });\n        if (items.length === 0) {\n            console.log(c.yellow(`  Collection '${collName}' is empty.`));\n        } else {\n            console.log(c.bold(`\\n━━━ ${collName} (${coll.count()} items) ━━━\\n`));\n            for (const item of items) {\n                const age = Math.round((Date.now() / 1000 - item.createdAt) / 60);\n                console.log(`  #${item.id} ${c.dim(`(${age}m ago)`)} ${item.content.slice(0, 80)}`);\n            }\n        }\n        brain.close();\n        return;\n    }\n\n    // ── trim ────────────────────────────────────────\n    if (sub === 'trim') {\n        const collName = pos[2];\n        const keep = parseInt(getFlag('keep') || '0', 10);\n\n        if (!collName || keep <= 0) {\n            console.log(c.red('Usage: brainbank kv trim <collection> --keep <n>'));\n            process.exit(1);\n        }\n\n        const brain = await createBrain();\n        await brain.initialize();\n        const coll = brain.collection(collName);\n        const result = await coll.trim({ keep });\n        console.log(c.green(`✓ Trimmed ${result.removed} items from '${collName}' (kept ${keep})`));\n        brain.close();\n        return;\n    }\n\n    // ── clear ───────────────────────────────────────\n    if (sub === 'clear') {\n        const collName = pos[2];\n        if (!collName) {\n            console.log(c.red('Usage: brainbank kv clear <collection>'));\n            process.exit(1);\n        }\n\n        const brain = await createBrain();\n        await brain.initialize();\n        const coll = brain.collection(collName);\n        const before = coll.count();\n        coll.clear();\n        console.log(c.green(`✓ Cleared ${before} items from '${collName}'`));\n        brain.close();\n        return;\n    }\n\n    console.log(c.red('Usage: brainbank kv <add|search|list|trim|clear>'));\n    process.exit(1);\n}\n\n","/**\n * brainbank docs — Index document collections\n * brainbank dsearch — Search documents only\n */\n\nimport { c, args, getFlag, stripFlags } from '@/cli/utils.ts';\nimport { createBrain } from '@/cli/factory.ts';\n\nexport async function cmdDocs(): Promise<void> {\n    const collection = getFlag('collection');\n    const brain = await createBrain();\n\n    console.log(c.bold('\\n━━━ BrainBank Docs Index ━━━\\n'));\n\n    const opts: { collections?: string[]; onProgress?: any } = {};\n    if (collection) opts.collections = [collection];\n    opts.onProgress = (col: string, file: string, cur: number, total: number) => {\n        process.stdout.write(`\\r  ${c.cyan(col)} [${cur}/${total}] ${file}                    `);\n    };\n\n    const results = await brain.indexDocs(opts);\n\n    console.log('\\n');\n    for (const [name, stat] of Object.entries(results)) {\n        console.log(`  ${c.green(name)}: ${stat.indexed} indexed, ${stat.skipped} skipped, ${stat.chunks} chunks`);\n    }\n\n    brain.close();\n}\n\nexport async function cmdDocSearch(): Promise<void> {\n    const query = stripFlags(args).slice(1).join(' ');\n    if (!query) {\n        console.log(c.red('Usage: brainbank dsearch <query>'));\n        process.exit(1);\n    }\n\n    const brain = await createBrain();\n    const collection = getFlag('collection');\n    const k = parseInt(getFlag('k') || '8', 10);\n\n    console.log(c.bold(`\\n━━━ BrainBank Doc Search: \"${query}\" ━━━\\n`));\n\n    const results = await brain.searchDocs(query, { collection: collection ?? undefined, k });\n\n    if (results.length === 0) {\n        console.log(c.yellow('  No results found.'));\n        brain.close();\n        return;\n    }\n\n    for (const r of results) {\n        const score = Math.round(r.score * 100);\n        const ctx = r.context ? ` — ${c.dim(r.context)}` : '';\n        console.log(`${c.magenta(`[DOC ${score}%]`)} ${c.bold(r.filePath!)} [${(r.metadata as any).collection}]${ctx}`);\n        const preview = r.content.split('\\n').slice(0, 4).join('\\n');\n        console.log(c.dim(preview));\n        console.log('');\n    }\n\n    brain.close();\n}\n","/**\n * brainbank search — Semantic search (vector)\n * brainbank hsearch — Hybrid search (vector + BM25)\n * brainbank ksearch — Keyword search (BM25)\n */\n\nimport { c, args, stripFlags, printResults } from '@/cli/utils.ts';\nimport { createBrain } from '@/cli/factory.ts';\n\nexport async function cmdSearch(): Promise<void> {\n    const query = stripFlags(args).slice(1).join(' ');\n    if (!query) {\n        console.log(c.red('Usage: brainbank search <query>'));\n        process.exit(1);\n    }\n\n    const brain = await createBrain();\n    console.log(c.bold(`\\n━━━ BrainBank Search: \"${query}\" ━━━\\n`));\n\n    const results = await brain.search(query);\n    printResults(results);\n    brain.close();\n}\n\nexport async function cmdHybridSearch(): Promise<void> {\n    const query = stripFlags(args).slice(1).join(' ');\n    if (!query) {\n        console.log(c.red('Usage: brainbank hsearch <query>'));\n        process.exit(1);\n    }\n\n    const brain = await createBrain();\n    console.log(c.bold(`\\n━━━ BrainBank Hybrid Search: \"${query}\" ━━━`));\n    console.log(c.dim(`  Mode: vector + BM25 → Reciprocal Rank Fusion\\n`));\n\n    const results = await brain.hybridSearch(query);\n    printResults(results);\n    brain.close();\n}\n\nexport async function cmdKeywordSearch(): Promise<void> {\n    const query = stripFlags(args).slice(1).join(' ');\n    if (!query) {\n        console.log(c.red('Usage: brainbank ksearch <query>'));\n        process.exit(1);\n    }\n\n    const brain = await createBrain();\n    await brain.initialize();\n    console.log(c.bold(`\\n━━━ BrainBank Keyword Search: \"${query}\" ━━━`));\n    console.log(c.dim(`  Mode: BM25 full-text (instant)\\n`));\n\n    const results = await brain.searchBM25(query);\n    printResults(results);\n    brain.close();\n}\n","/**\n * brainbank context <task> — Get formatted context for a task\n * brainbank context add <collection> <path> <description>\n * brainbank context list\n */\n\nimport { c, args, stripFlags } from '@/cli/utils.ts';\nimport { createBrain } from '@/cli/factory.ts';\n\nexport async function cmdContext(): Promise<void> {\n    const pos = stripFlags(args);\n    const sub = pos[1];\n\n    // brainbank context add <collection> <path> <description>\n    if (sub === 'add') {\n        const collection = pos[2];\n        const path = pos[3];\n        const desc = pos.slice(4).join(' ');\n\n        if (!collection || !path || !desc) {\n            console.log(c.red('Usage: brainbank context add <collection> <path> <description>'));\n            process.exit(1);\n        }\n\n        const brain = await createBrain();\n        await brain.initialize();\n        brain.addContext(collection, path, desc);\n        console.log(c.green(`✓ Context added: ${collection}:${path} → \"${desc}\"`));\n        brain.close();\n        return;\n    }\n\n    // brainbank context list\n    if (sub === 'list') {\n        const brain = await createBrain();\n        await brain.initialize();\n        const contexts = brain.listContexts();\n        if (contexts.length === 0) {\n            console.log(c.yellow('  No contexts configured.'));\n        } else {\n            console.log(c.bold('\\n━━━ Contexts ━━━\\n'));\n            for (const ctx of contexts) {\n                console.log(`  ${c.cyan(ctx.collection)}:${ctx.path} → ${c.dim(ctx.context)}`);\n            }\n        }\n        brain.close();\n        return;\n    }\n\n    // brainbank context <task> — get formatted context\n    const task = stripFlags(args).slice(1).join(' ');\n    if (!task) {\n        console.log(c.red('Usage: brainbank context <task description>'));\n        console.log(c.dim('       brainbank context add <collection> <path> <description>'));\n        console.log(c.dim('       brainbank context list'));\n        process.exit(1);\n    }\n\n    const brain = await createBrain();\n    const context = await brain.getContext(task);\n    console.log(context);\n    brain.close();\n}\n","/**\n * brainbank stats    — Show index statistics\n * brainbank reembed  — Re-embed all vectors\n * brainbank watch    — Watch for file changes\n * brainbank serve    — Start MCP server\n */\n\nimport { c } from '@/cli/utils.ts';\nimport { createBrain } from '@/cli/factory.ts';\n\n// ── Stats ───────────────────────────────────────────\n\nexport async function cmdStats(): Promise<void> {\n    const brain = await createBrain();\n    await brain.initialize();\n\n    const s = brain.stats();\n\n    console.log(c.bold('\\n━━━ BrainBank Stats ━━━\\n'));\n    console.log(`  ${c.cyan('Plugins')}: ${brain.plugins.join(', ')}\\n`);\n\n    if (s.code) {\n        console.log(`  ${c.cyan('Code')}`);\n        console.log(`    Files indexed:  ${s.code.files}`);\n        console.log(`    Code chunks:    ${s.code.chunks}`);\n        console.log(`    HNSW vectors:   ${s.code.hnswSize}`);\n        console.log('');\n    }\n\n    if (s.git) {\n        console.log(`  ${c.cyan('Git History')}`);\n        console.log(`    Commits:        ${s.git.commits}`);\n        console.log(`    Files tracked:  ${s.git.filesTracked}`);\n        console.log(`    Co-edit pairs:  ${s.git.coEdits}`);\n        console.log(`    HNSW vectors:   ${s.git.hnswSize}`);\n        console.log('');\n    }\n\n    if (s.documents) {\n        console.log(`  ${c.cyan('Documents')}`);\n        console.log(`    Collections:    ${s.documents.collections}`);\n        console.log(`    Documents:      ${s.documents.documents}`);\n        console.log(`    Chunks:         ${s.documents.chunks}`);\n        console.log(`    HNSW vectors:   ${s.documents.hnswSize}`);\n        console.log('');\n    }\n\n    // KV collections\n    const kvNames = brain.listCollectionNames();\n    if (kvNames.length > 0) {\n        console.log(`  ${c.cyan('KV Collections')}`);\n        for (const name of kvNames) {\n            const coll = brain.collection(name);\n            console.log(`    ${name}: ${coll.count()} items`);\n        }\n        console.log('');\n    }\n\n    brain.close();\n}\n\n// ── Re-embed ────────────────────────────────────────\n\nexport async function cmdReembed(): Promise<void> {\n    const brain = await createBrain();\n    await brain.initialize();\n\n    console.log(c.bold('\\n━━━ BrainBank Re-embed ━━━\\n'));\n    console.log(c.dim('  Regenerating vectors with current embedding provider...'));\n    console.log(c.dim('  Text, FTS, and metadata remain unchanged.\\n'));\n\n    const result = await brain.reembed({\n        onProgress: (table, current, total) => {\n            process.stdout.write(`\\r  ${c.cyan(table.padEnd(8))} ${current}/${total}`);\n        },\n    });\n\n    console.log('\\n');\n    if (result.code > 0)   console.log(`  ${c.green('✓')} Code:    ${result.code} vectors`);\n    if (result.git > 0)    console.log(`  ${c.green('✓')} Git:     ${result.git} vectors`);\n    if (result.docs > 0)   console.log(`  ${c.green('✓')} Docs:    ${result.docs} vectors`);\n    if (result.kv > 0)     console.log(`  ${c.green('✓')} KV:      ${result.kv} vectors`);\n    if (result.notes > 0)  console.log(`  ${c.green('✓')} Notes:   ${result.notes} vectors`);\n    if (result.memory > 0) console.log(`  ${c.green('✓')} Memory:  ${result.memory} vectors`);\n    console.log(`\\n  ${c.bold('Total')}: ${result.total} vectors regenerated\\n`);\n\n    brain.close();\n}\n\n// ── Watch ───────────────────────────────────────────\n\nexport async function cmdWatch(): Promise<void> {\n    const brain = await createBrain();\n    await brain.initialize();\n\n    console.log(c.bold('\\n━━━ BrainBank Watch ━━━\\n'));\n    console.log(c.dim(`  Watching ${brain.config.repoPath} for changes...`));\n    console.log(c.dim('  Press Ctrl+C to stop.\\n'));\n\n    const watcher = brain.watch({\n        debounceMs: 2000,\n        onIndex: (file, indexer) => {\n            const ts = new Date().toLocaleTimeString();\n            console.log(`  ${c.dim(ts)} ${c.green('✓')} ${c.cyan(indexer)}: ${file}`);\n        },\n        onError: (err) => {\n            console.error(`  ${c.red('✗')} ${err.message}`);\n        },\n    });\n\n    // Keep process alive, clean up on Ctrl+C\n    process.on('SIGINT', () => {\n        console.log(c.dim('\\n  Stopping watcher...'));\n        watcher.close();\n        brain.close();\n        process.exit(0);\n    });\n\n    await new Promise(() => {});\n}\n\n// ── Serve ───────────────────────────────────────────\n\nexport async function cmdServe(): Promise<void> {\n    await import('@brainbank/mcp');\n}\n\n// ── Help ────────────────────────────────────────────\n\nexport function showHelp(): void {\n    console.log(c.bold('\\n━━━ BrainBank — Semantic Knowledge Bank ━━━\\n'));\n    console.log(c.bold('Indexing:'));\n    console.log(`  ${c.cyan('index')} [path]                      Index code + git history`);\n    console.log(`  ${c.cyan('collection add')} <path> --name      Add a document collection`);\n    console.log(`  ${c.cyan('collection list')}                    List collections`);\n    console.log(`  ${c.cyan('collection remove')} <name>           Remove a collection`);\n    console.log(`  ${c.cyan('docs')} [--collection <name>]         Index document collections`);\n    console.log('');\n    console.log(c.bold('Search:'));\n    console.log(`  ${c.cyan('search')} <query>                     Semantic search (vector)`);\n    console.log(`  ${c.cyan('hsearch')} <query>                    Hybrid search (${c.bold('best quality')})`);\n    console.log(`  ${c.cyan('ksearch')} <query>                    Keyword search (BM25, instant)`);\n    console.log(`  ${c.cyan('dsearch')} <query>                    Document search`);\n    console.log('');\n    console.log(c.bold('Context:'));\n    console.log(`  ${c.cyan('context')} <task>                     Get formatted context for a task`);\n    console.log(`  ${c.cyan('context add')} <col> <path> <desc>    Add context metadata`);\n    console.log(`  ${c.cyan('context list')}                       List all context metadata`);\n    console.log('');\n    console.log(c.bold('KV Store:'));\n    console.log(`  ${c.cyan('kv add')} <coll> <content>            Add item to a collection`);\n    console.log(`  ${c.cyan('kv search')} <coll> <query>           Search a collection`);\n    console.log(`  ${c.cyan('kv list')} [coll]                     List collections or items`);\n    console.log(`  ${c.cyan('kv trim')} <coll> --keep <n>          Keep only N most recent`);\n    console.log(`  ${c.cyan('kv clear')} <coll>                    Clear all items`);\n    console.log('');\n    console.log(c.bold('Utility:'));\n    console.log(`  ${c.cyan('stats')}                              Show index statistics`);\n    console.log(`  ${c.cyan('reembed')}                            Re-embed all vectors`);\n    console.log(`  ${c.cyan('watch')}                              Watch files, auto-re-index`);\n    console.log(`  ${c.cyan('serve')}                              Start MCP server (stdio)`);\n    console.log('');\n    console.log(c.bold('Options:'));\n    console.log(`  ${c.dim('--repo <path>')}           Repository path (default: .)`);\n    console.log(`  ${c.dim('--force')}                 Force re-index all files`);\n    console.log(`  ${c.dim('--depth <n>')}             Git history depth (default: 500)`);\n    console.log(`  ${c.dim('--collection <name>')}     Filter by collection`);\n    console.log(`  ${c.dim('--pattern <glob>')}        Collection glob (default: **/*.md)`);\n    console.log(`  ${c.dim('--context <desc>')}        Context description`);\n    console.log(`  ${c.dim('--reranker <name>')}       Reranker to use (qwen3)`);\n    console.log('');\n    console.log(c.bold('Examples:'));\n    console.log(c.dim('  brainbank index .'));\n    console.log(c.dim('  brainbank kv add errors \"Fixed null pointer in api.ts\"'));\n    console.log(c.dim('  brainbank kv search errors \"null pointer\"'));\n    console.log(c.dim('  brainbank kv list'));\n    console.log(c.dim('  brainbank hsearch \"authentication middleware\"'));\n    console.log(c.dim('  brainbank context \"add rate limiting to the API\"'));\n    console.log(c.dim('  brainbank serve'));\n}\n","#!/usr/bin/env node\n\n/**\n * BrainBank — CLI Entry Point\n *\n * Dispatcher that routes commands to their handler modules.\n */\n\nimport { args, c } from './utils.ts';\nimport { cmdIndex } from './commands/index-cmd.ts';\nimport { cmdCollection } from './commands/collection.ts';\nimport { cmdKv } from './commands/kv.ts';\nimport { cmdDocs, cmdDocSearch } from './commands/docs.ts';\nimport { cmdSearch, cmdHybridSearch, cmdKeywordSearch } from './commands/search.ts';\nimport { cmdContext } from './commands/context.ts';\nimport { cmdStats, cmdReembed, cmdWatch, cmdServe, showHelp } from './commands/system.ts';\n\nconst command = args[0];\n\nasync function main(): Promise<void> {\n    switch (command) {\n        case 'index':       return cmdIndex();\n        case 'collection':  return cmdCollection();\n        case 'kv':          return cmdKv();\n        case 'docs':        return cmdDocs();\n        case 'dsearch':     return cmdDocSearch();\n        case 'search':      return cmdSearch();\n        case 'hsearch':     return cmdHybridSearch();\n        case 'ksearch':     return cmdKeywordSearch();\n        case 'context':     return cmdContext();\n        case 'stats':       return cmdStats();\n        case 'reembed':     return cmdReembed();\n        case 'watch':       return cmdWatch();\n        case 'serve':       return cmdServe();\n        case 'help':\n        case '--help':\n        case '-h':\n            showHelp();\n            break;\n        default:\n            if (command) console.log(c.red(`Unknown command: ${command}\\n`));\n            showHelp();\n            process.exit(command ? 1 : 0);\n    }\n}\n\nmain().catch(err => {\n    console.error(c.red(`Error: ${err.message}`));\n    if (process.env.BRAINBANK_DEBUG) console.error(err.stack);\n    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package/dist/code.d.ts

@@ -1,4 +1,4 @@
-import { I as Indexer } from './base-DZWtdgIf.js';
+import { E as EmbeddingProvider, P as Plugin } from './base-3SNc_CeY.js';
 import 'better-sqlite3';
 
 /**
@@ -24,8 +24,10 @@ interface CodePluginOptions {
     maxFileSize?: number;
     /** Custom indexer name for multi-repo (e.g. 'code:frontend'). Default: 'code' */
     name?: string;
+    /** Per-plugin embedding provider. Default: global embedding from BrainBank config. */
+    embeddingProvider?: EmbeddingProvider;
 }
 /** Create a code indexing plugin. */
-declare function code(opts?: CodePluginOptions): Indexer;
+declare function code(opts?: CodePluginOptions): Plugin;
 
 export { type CodePluginOptions, code };

package/dist/code.js

@@ -1,6 +1,6 @@
 import {
   code
-} from "./chunk-DDECTPRM.js";
+} from "./chunk-FGL32LUJ.js";
 import "./chunk-U2Q2XGPZ.js";
 import "./chunk-7QVYU63E.js";
 export {

package/dist/docs.d.ts

@@ -1,4 +1,4 @@
-import { I as Indexer } from './base-DZWtdgIf.js';
+import { E as EmbeddingProvider, P as Plugin } from './base-3SNc_CeY.js';
 import 'better-sqlite3';
 
 /**
@@ -11,7 +11,11 @@ import 'better-sqlite3';
  *   brain.use(docs());
  */
 
+interface DocsPluginOptions {
+    /** Per-plugin embedding provider. Default: global embedding from BrainBank config. */
+    embeddingProvider?: EmbeddingProvider;
+}
 /** Create a document collections plugin. */
-declare function docs(): Indexer;
+declare function docs(opts?: DocsPluginOptions): Plugin;
 
-export { docs };
+export { type DocsPluginOptions, docs };

package/dist/docs.js

@@ -1,6 +1,6 @@
 import {
   docs
-} from "./chunk-YRGUIRN5.js";
+} from "./chunk-VQ27YUHH.js";
 import "./chunk-YOLKSYWK.js";
 import "./chunk-7QVYU63E.js";
 export {

package/dist/git.d.ts

@@ -1,4 +1,4 @@
-import { I as Indexer } from './base-DZWtdgIf.js';
+import { E as EmbeddingProvider, P as Plugin } from './base-3SNc_CeY.js';
 import 'better-sqlite3';
 
 /**
@@ -24,8 +24,10 @@ interface GitPluginOptions {
     maxDiffBytes?: number;
     /** Custom indexer name for multi-repo (e.g. 'git:frontend'). Default: 'git' */
     name?: string;
+    /** Per-plugin embedding provider. Default: global embedding from BrainBank config. */
+    embeddingProvider?: EmbeddingProvider;
 }
 /** Create a git history plugin. */
-declare function git(opts?: GitPluginOptions): Indexer;
+declare function git(opts?: GitPluginOptions): Plugin;
 
 export { type GitPluginOptions, git };

package/dist/git.js

@@ -1,6 +1,6 @@
 import {
   git
-} from "./chunk-TTXVJFAE.js";
+} from "./chunk-JRSKWF6K.js";
 import "./chunk-U2Q2XGPZ.js";
 import "./chunk-7QVYU63E.js";
 export {

package/dist/index.d.ts

@@ -1,6 +1,6 @@
 import { EventEmitter } from 'node:events';
-import { P as ProgressCallback, B as BrainBankConfig, I as Indexer, C as Collection, S as StageProgressCallback, a as IndexResult, D as DocumentCollection, b as SearchResult, c as ContextOptions, d as CoEditSuggestion, e as IndexStats, R as ResolvedConfig, E as EmbeddingProvider, V as VectorIndex, f as SearchHit, g as CodeChunk, h as Database, H as HNSWIndex, L as LearningPattern, i as Reranker } from './base-DZWtdgIf.js';
-export { j as CodeResult, k as CodeResultMetadata, l as CollectionAddOptions, m as CollectionItem, n as CollectionPlugin, o as CollectionResult, p as CollectionSearchOptions, q as CommitResult, r as CommitResultMetadata, s as DistilledStrategy, t as DocChunk, u as DocumentResult, v as DocumentResultMetadata, G as GitCommitRecord, w as IndexablePlugin, x as IndexerContext, y as PatternResult, z as PatternResultMetadata, A as SearchResultType, F as SearchablePlugin, W as WatchablePlugin, J as isCodeResult, K as isCollectionResult, M as isCommitResult, N as isDocumentResult, O as isPatternResult, Q as matchResult } from './base-DZWtdgIf.js';
+import { a as ProgressCallback, B as BrainBankConfig, P as Plugin, C as Collection, S as StageProgressCallback, I as IndexResult, D as DocumentCollection, b as SearchResult, c as ContextOptions, d as CoEditSuggestion, e as IndexStats, R as ResolvedConfig, E as EmbeddingProvider, f as Reranker, V as VectorIndex, g as SearchHit, h as CodeChunk, i as Database, H as HNSWIndex, L as LearningPattern } from './base-3SNc_CeY.js';
+export { j as CodeResult, k as CodeResultMetadata, l as CollectionAddOptions, m as CollectionItem, n as CollectionPlugin, o as CollectionResult, p as CollectionSearchOptions, q as CommitResult, r as CommitResultMetadata, s as DistilledStrategy, t as DocChunk, u as DocumentResult, v as DocumentResultMetadata, G as GitCommitRecord, w as IndexablePlugin, x as PatternResult, y as PatternResultMetadata, z as PluginContext, A as SearchResultType, F as SearchablePlugin, W as WatchablePlugin, J as isCodeResult, K as isCollectionResult, M as isCommitResult, N as isDocumentResult, O as isPatternResult, Q as matchResult } from './base-3SNc_CeY.js';
 export { code } from './code.js';
 export { git } from './git.js';
 export { docs } from './docs.js';
@@ -76,7 +76,7 @@ interface ReembedOptions {
  * BrainBank — Main Orchestrator
  *
  * Thin facade that composes four services:
- *   IndexerRegistry  — registration + lookup
+ *   PluginRegistry   — registration + lookup
  *   Initializer      — two-phase startup (earlyInit / lateInit)
  *   SearchAPI        — all search + context logic
  *   IndexAPI         — code / git / docs indexing orchestration
@@ -101,17 +101,17 @@ declare class BrainBank extends EventEmitter {
     private _sharedHnsw;
     constructor(config?: BrainBankConfig);
     /**
-     * Register an indexer. Chainable.
+     * Register a plugin. Chainable.
      *
      *   brain.use(code({ repoPath: '.' })).use(docs());
      */
-    use(indexer: Indexer): this;
-    /** Get the list of registered indexer names. */
-    get indexers(): string[];
-    /** Check if an indexer is loaded. Also matches type prefix (e.g. 'code' matches 'code:frontend'). */
+    use(plugin: Plugin): this;
+    /** Get the list of registered plugin names. */
+    get plugins(): string[];
+    /** Check if a plugin is loaded. Also matches type prefix (e.g. 'code' matches 'code:frontend'). */
     has(name: string): boolean;
-    /** Get an indexer instance. Throws if not loaded. */
-    indexer<T extends Indexer = Indexer>(n: string): T;
+    /** Get a plugin instance. Throws if not loaded. */
+    plugin<T extends Plugin = Plugin>(n: string): T;
     /**
      * Initialize database, HNSW indices, and load existing vectors.
      * Only initializes registered modules.
@@ -442,6 +442,65 @@ declare function cosineSimilarity(a: Float32Array, b: Float32Array): number;
  */
 declare function normalize(vec: Float32Array): Float32Array;
 
+/**
+ * BrainBank — Qwen3 Local Reranker
+ *
+ * Cross-encoder reranker using Qwen3-Reranker-0.6B via node-llama-cpp.
+ * Auto-downloads the GGUF model from HuggingFace (~640MB, cached).
+ *
+ * Based on QMD's reranker architecture:
+ * - Lazy model loading (loads on first rank() call)
+ * - Flash attention for 20× less VRAM
+ * - Document deduplication (identical texts scored once)
+ * - Tokenizer-based truncation for oversized documents
+ */
+
+interface Qwen3RerankerOptions {
+    /** HuggingFace model URI. Default: Qwen3-Reranker-0.6B-Q8_0 */
+    modelUri?: string;
+    /** Model cache directory. Default: ~/.cache/brainbank/models/ */
+    cacheDir?: string;
+    /** Context size for ranking. Default: 2048 */
+    contextSize?: number;
+}
+declare class Qwen3Reranker implements Reranker {
+    private readonly _modelUri;
+    private readonly _cacheDir;
+    private readonly _contextSize;
+    private _model;
+    private _context;
+    private _loadPromise;
+    constructor(options?: Qwen3RerankerOptions);
+    /**
+     * Lazy-load the reranker model and create a ranking context.
+     * Model is auto-downloaded from HuggingFace on first use.
+     */
+    private _ensureLoaded;
+    /**
+     * Score each document's relevance to the query.
+     * Returns scores (0.0 - 1.0) in same order as input documents.
+     *
+     * Deduplicates identical documents to avoid redundant computation.
+     */
+    rank(query: string, documents: string[]): Promise<number[]>;
+    /** Release model resources. */
+    close(): Promise<void>;
+}
+
+/**
+ * BrainBank — Embedding Provider Resolver
+ *
+ * Resolves an EmbeddingProvider from a stored key string.
+ * Used by the Initializer to auto-resolve from DB config.
+ */
+
+/** Known embedding provider keys. */
+type EmbeddingKey = 'local' | 'openai' | 'perplexity' | 'perplexity-context';
+/** Resolve an EmbeddingProvider from a key string. Lazy-loads the provider module. */
+declare function resolveEmbedding(key: string): Promise<EmbeddingProvider>;
+/** Infer a stable key from an existing provider instance. */
+declare function providerKey(p: EmbeddingProvider): EmbeddingKey;
+
 declare const DEFAULTS: ResolvedConfig;
 /**
  * Merge partial config with defaults.
@@ -492,11 +551,12 @@ declare class CodeChunker {
     constructor(config?: ChunkerConfig);
     /** Lazy-init tree-sitter parser. */
     private _ensureParser;
-    /** Load a language grammar (cached). */
+    /** Load a language grammar (cached). Throws if grammar package is not installed. */
     private _loadGrammar;
     /**
      * Split file content into semantic chunks using tree-sitter AST.
-     * Falls back to sliding window if grammar isn't available.
+     * Throws if the language has a grammar but the package isn't installed.
+     * Falls back to sliding window only for truly unsupported languages.
      */
     chunk(filePath: string, content: string, language: string): Promise<CodeChunk[]>;
     /** Walk AST and extract top-level semantic blocks. */
@@ -530,7 +590,7 @@ declare class CodeChunker {
  * Incremental: only re-indexes files that changed (by content hash).
  */
 
-interface CodeIndexerDeps {
+interface CodeWalkerDeps {
     db: Database;
     hnsw: HNSWIndex;
     vectorCache: Map<number, Float32Array>;
@@ -540,12 +600,12 @@ interface CodeIndexOptions {
     forceReindex?: boolean;
     onProgress?: ProgressCallback;
 }
-declare class CodeIndexer {
+declare class CodeWalker {
     private _chunker;
     private _deps;
     private _repoPath;
     private _maxFileSize;
-    constructor(repoPath: string, deps: CodeIndexerDeps, maxFileSize?: number);
+    constructor(repoPath: string, deps: CodeWalkerDeps, maxFileSize?: number);
     /** Index all supported files. Skips unchanged files (same content hash). */
     index(options?: CodeIndexOptions): Promise<IndexResult>;
     /** Remove old chunks and their HNSW vectors for a file. */
@@ -647,7 +707,7 @@ declare class DocsIndexer {
     /** Split document into chunks at natural markdown boundaries. */
     private _smartChunk;
     /** Handle the last chunk: merge if too small, otherwise push. */
-    private _pushLastChunk;
+    private _flushRemainder;
     /** Find the best break position within the target window. */
     private _findBestBreak;
     /** Find all potential break points in the document with scores. */
@@ -968,4 +1028,4 @@ declare class KeywordSearch implements SearchStrategy {
  */
 declare function reciprocalRankFusion(resultSets: SearchResult[][], k?: number, maxResults?: number): SearchResult[];
 
-export { KeywordSearch as BM25Search, BrainBank, BrainBankConfig, CoEditAnalyzer, CoEditSuggestion, CodeChunk, CodeChunker, CodeIndexer, Collection, Consolidator, ContextBuilder, ContextOptions, DEFAULTS, DocsIndexer, DocumentCollection, EmbeddingProvider, GitIndexer, HNSWIndex, IGNORE_DIRS, IndexResult, IndexStats, Indexer, KeywordSearch, LearningPattern, LocalEmbedding, VectorSearch as MultiIndexSearch, type NoteDigest, NoteStore, OpenAIEmbedding, type OpenAIEmbeddingOptions, PatternStore, PerplexityContextEmbedding, type PerplexityContextEmbeddingOptions, PerplexityEmbedding, type PerplexityEmbeddingOptions, ProgressCallback, type RecallOptions, type ReembedOptions, type ReembedResult, Reranker, ResolvedConfig, SUPPORTED_EXTENSIONS, SearchHit, type SearchOptions, SearchResult, type SearchStrategy, StageProgressCallback, type StoredNote, VectorIndex, VectorSearch, type WatchOptions, type Watcher, cosineSimilarity, getLanguage, isSupported, normalize, reciprocalRankFusion, resolveConfig, searchMMR };
+export { KeywordSearch as BM25Search, BrainBank, BrainBankConfig, CoEditAnalyzer, CoEditSuggestion, CodeChunk, CodeChunker, CodeWalker, Collection, Consolidator, ContextBuilder, ContextOptions, DEFAULTS, DocsIndexer, DocumentCollection, type EmbeddingKey, EmbeddingProvider, GitIndexer, HNSWIndex, IGNORE_DIRS, IndexResult, IndexStats, KeywordSearch, LearningPattern, LocalEmbedding, VectorSearch as MultiIndexSearch, type NoteDigest, NoteStore, OpenAIEmbedding, type OpenAIEmbeddingOptions, PatternStore, PerplexityContextEmbedding, type PerplexityContextEmbeddingOptions, PerplexityEmbedding, type PerplexityEmbeddingOptions, Plugin, ProgressCallback, Qwen3Reranker, type Qwen3RerankerOptions, type RecallOptions, type ReembedOptions, type ReembedResult, Reranker, ResolvedConfig, SUPPORTED_EXTENSIONS, SearchHit, type SearchOptions, SearchResult, type SearchStrategy, StageProgressCallback, type StoredNote, VectorIndex, VectorSearch, type WatchOptions, type Watcher, cosineSimilarity, getLanguage, isSupported, normalize, providerKey, reciprocalRankFusion, resolveConfig, resolveEmbedding, searchMMR };