bone-agent 1.4.0 → 2.0.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (126) hide show
  1. package/bin/bone.js +39 -0
  2. package/package.json +25 -39
  3. package/LICENSE +0 -21
  4. package/README.md +0 -201
  5. package/bin/npm-wrapper.js +0 -235
  6. package/bin/rg +0 -0
  7. package/bin/rg.exe +0 -0
  8. package/config.yaml.example +0 -144
  9. package/prompts/main/ask_questions.md +0 -31
  10. package/prompts/main/batch_independent_calls.md +0 -5
  11. package/prompts/main/casual_interactions.md +0 -11
  12. package/prompts/main/code_references.md +0 -8
  13. package/prompts/main/communication_style.md +0 -12
  14. package/prompts/main/context_reliability.md +0 -12
  15. package/prompts/main/conversational_tool_calling.md +0 -15
  16. package/prompts/main/dream.md +0 -50
  17. package/prompts/main/editing_pattern.md +0 -13
  18. package/prompts/main/error_handling.md +0 -6
  19. package/prompts/main/exploration_pattern.md +0 -21
  20. package/prompts/main/intro.md +0 -1
  21. package/prompts/main/obsidian.md +0 -16
  22. package/prompts/main/obsidian_project.md +0 -79
  23. package/prompts/main/professional_objectivity.md +0 -3
  24. package/prompts/main/skills.md +0 -3
  25. package/prompts/main/targeted_searching.md +0 -10
  26. package/prompts/main/task_lists_pattern.md +0 -8
  27. package/prompts/main/temp_folder.md +0 -9
  28. package/prompts/main/think_before_acting.md +0 -10
  29. package/prompts/main/tone_and_style.md +0 -4
  30. package/prompts/main/tool_preferences.md +0 -24
  31. package/prompts/main/trust_subagent_context.md +0 -21
  32. package/prompts/main/when_to_use_sub_agent.md +0 -7
  33. package/prompts/micro/ask_questions.md +0 -1
  34. package/prompts/micro/batch_independent_calls.md +0 -1
  35. package/prompts/micro/casual_interactions.md +0 -1
  36. package/prompts/micro/code_references.md +0 -1
  37. package/prompts/micro/communication_style.md +0 -1
  38. package/prompts/micro/context_reliability.md +0 -1
  39. package/prompts/micro/conversational_tool_calling.md +0 -1
  40. package/prompts/micro/editing_pattern.md +0 -1
  41. package/prompts/micro/error_handling.md +0 -1
  42. package/prompts/micro/exploration_pattern.md +0 -1
  43. package/prompts/micro/intro.md +0 -1
  44. package/prompts/micro/obsidian.md +0 -4
  45. package/prompts/micro/obsidian_project.md +0 -5
  46. package/prompts/micro/professional_objectivity.md +0 -1
  47. package/prompts/micro/skills.md +0 -1
  48. package/prompts/micro/targeted_searching.md +0 -1
  49. package/prompts/micro/task_lists_pattern.md +0 -1
  50. package/prompts/micro/temp_folder.md +0 -1
  51. package/prompts/micro/think_before_acting.md +0 -5
  52. package/prompts/micro/tone_and_style.md +0 -1
  53. package/prompts/micro/tool_preferences.md +0 -1
  54. package/prompts/micro/trust_subagent_context.md +0 -1
  55. package/prompts/micro/when_to_use_sub_agent.md +0 -1
  56. package/requirements.txt +0 -9
  57. package/src/__init__.py +0 -11
  58. package/src/core/__init__.py +0 -1
  59. package/src/core/agentic.py +0 -1085
  60. package/src/core/chat_manager.py +0 -1577
  61. package/src/core/config_manager.py +0 -260
  62. package/src/core/cron.py +0 -578
  63. package/src/core/cron_allowlist.py +0 -118
  64. package/src/core/memory.py +0 -145
  65. package/src/core/metadata.py +0 -75
  66. package/src/core/retry.py +0 -71
  67. package/src/core/skills.py +0 -463
  68. package/src/core/sub_agent.py +0 -376
  69. package/src/core/tool_approval.py +0 -220
  70. package/src/core/tool_feedback.py +0 -789
  71. package/src/exceptions.py +0 -79
  72. package/src/llm/__init__.py +0 -1
  73. package/src/llm/client.py +0 -176
  74. package/src/llm/codex_provider.py +0 -350
  75. package/src/llm/config.py +0 -536
  76. package/src/llm/prompts.py +0 -494
  77. package/src/llm/providers.py +0 -438
  78. package/src/llm/streaming.py +0 -163
  79. package/src/llm/token_tracker.py +0 -399
  80. package/src/tools/__init__.py +0 -151
  81. package/src/tools/constants.py +0 -59
  82. package/src/tools/create_file.py +0 -136
  83. package/src/tools/directory.py +0 -389
  84. package/src/tools/edit.py +0 -549
  85. package/src/tools/file_reader.py +0 -322
  86. package/src/tools/helpers/__init__.py +0 -99
  87. package/src/tools/helpers/base.py +0 -599
  88. package/src/tools/helpers/converters.py +0 -44
  89. package/src/tools/helpers/file_helpers.py +0 -189
  90. package/src/tools/helpers/formatters.py +0 -411
  91. package/src/tools/helpers/loader.py +0 -145
  92. package/src/tools/helpers/parallel_executor.py +0 -231
  93. package/src/tools/helpers/path_resolver.py +0 -283
  94. package/src/tools/helpers/plugin_manifest.py +0 -185
  95. package/src/tools/obsidian.py +0 -96
  96. package/src/tools/review_sub_agent.py +0 -190
  97. package/src/tools/rg_search.py +0 -477
  98. package/src/tools/search_plugins.py +0 -177
  99. package/src/tools/select_option.py +0 -600
  100. package/src/tools/shell.py +0 -302
  101. package/src/tools/sub_agent.py +0 -139
  102. package/src/tools/task_list.py +0 -269
  103. package/src/tools/web_search.py +0 -61
  104. package/src/ui/__init__.py +0 -1
  105. package/src/ui/banner.py +0 -87
  106. package/src/ui/commands.py +0 -3131
  107. package/src/ui/displays.py +0 -239
  108. package/src/ui/loader.py +0 -284
  109. package/src/ui/main.py +0 -643
  110. package/src/ui/prompt_utils.py +0 -113
  111. package/src/ui/setting_selector.py +0 -590
  112. package/src/ui/setup_wizard.py +0 -294
  113. package/src/ui/sub_agent_panel.py +0 -234
  114. package/src/ui/tool_confirmation.py +0 -226
  115. package/src/utils/__init__.py +0 -1
  116. package/src/utils/citation_parser.py +0 -199
  117. package/src/utils/editor.py +0 -207
  118. package/src/utils/gitignore_filter.py +0 -149
  119. package/src/utils/logger.py +0 -254
  120. package/src/utils/paths.py +0 -30
  121. package/src/utils/result_parsers.py +0 -108
  122. package/src/utils/safe_commands.py +0 -243
  123. package/src/utils/settings.py +0 -195
  124. package/src/utils/user_message_logger.py +0 -120
  125. package/src/utils/validation.py +0 -201
  126. package/src/utils/web_search.py +0 -173
@@ -1,463 +0,0 @@
1
- """User skill storage and active session skill helpers."""
2
-
3
- from __future__ import annotations
4
-
5
- import logging
6
- import os
7
- import re
8
- import tempfile
9
- from dataclasses import dataclass, field
10
- from pathlib import Path
11
- from typing import Callable, Generic, TypeVar
12
-
13
- import yaml
14
-
15
-
16
- logger = logging.getLogger(__name__)
17
-
18
- MAX_SKILL_BYTES = 32 * 1024
19
- SKILL_NAME_RE = re.compile(r"^[a-z0-9][a-z0-9_-]{0,63}$")
20
- _HEADING_RE = re.compile(r"^#\s+(.+?)\s*$")
21
- _FRONTMATTER_RE = re.compile(r"^---\s*\n(.*?)\n---\s*\n", re.DOTALL)
22
-
23
-
24
- @dataclass
25
- class SkillSummary:
26
- name: str
27
- path: Path
28
- preview: str
29
- modified: float
30
- description: str = ""
31
- tags: list[str] = field(default_factory=list)
32
-
33
-
34
- T = TypeVar("T")
35
-
36
-
37
- @dataclass
38
- class SearchCandidate(Generic[T]):
39
- item: T
40
- text: str
41
- compact_text: str
42
- exact_text: str = ""
43
-
44
-
45
- @dataclass
46
- class SearchMatch(Generic[T]):
47
- item: T
48
- score: float
49
-
50
-
51
- class SkillError(ValueError):
52
- """Raised when a skill operation cannot be completed."""
53
-
54
-
55
- def get_skills_dir() -> Path:
56
- """Return the configured skills directory."""
57
- override = os.environ.get("BONE_SKILLS_DIR")
58
- if override:
59
- return Path(override).expanduser().resolve()
60
- return Path.home() / ".bone" / "skills"
61
-
62
-
63
- def ensure_skills_dir() -> Path:
64
- """Create and return the skills directory."""
65
- path = get_skills_dir()
66
- path.mkdir(parents=True, exist_ok=True)
67
- return path
68
-
69
-
70
- def normalize_skill_name(raw: str) -> str:
71
- """Normalize a user-provided skill name for filesystem storage."""
72
- return (raw or "").strip().lower().replace(" ", "_")
73
-
74
-
75
- def validate_skill_name(raw: str) -> str:
76
- """Validate and return a normalized skill name."""
77
- name = normalize_skill_name(raw)
78
- if not SKILL_NAME_RE.fullmatch(name):
79
- raise SkillError(
80
- "Invalid skill name. Use lowercase letters, numbers, underscores, "
81
- "or hyphens; start with a letter or number."
82
- )
83
- if "/" in name or "\\" in name or name.startswith(".") or ".." in name:
84
- raise SkillError("Invalid skill name.")
85
- return name
86
-
87
-
88
- def get_skill_path(name: str) -> Path:
89
- """Return the safe path for a skill name."""
90
- valid_name = validate_skill_name(name)
91
- base = ensure_skills_dir().resolve()
92
- return base / f"{valid_name}.md"
93
-
94
-
95
- def _check_size(content: str) -> None:
96
- if len(content.encode("utf-8")) > MAX_SKILL_BYTES:
97
- raise SkillError(f"Skill is too large. Maximum size is {MAX_SKILL_BYTES} bytes.")
98
-
99
-
100
- def _parse_frontmatter(content: str) -> tuple[dict, str]:
101
- """Extract YAML frontmatter and remaining body from content.
102
-
103
- Returns:
104
- (metadata_dict, body_text). metadata_dict may be empty.
105
-
106
- Notes:
107
- If a frontmatter block is present but invalid, preserve the original content
108
- as body so callers do not silently discard user-authored metadata.
109
- """
110
- match = _FRONTMATTER_RE.match(content)
111
- if not match:
112
- return {}, content
113
- try:
114
- meta = yaml.safe_load(match.group(1)) or {}
115
- except yaml.YAMLError:
116
- return {}, content
117
- if not isinstance(meta, dict):
118
- return {}, content
119
- body = content[match.end():]
120
- return meta, body
121
-
122
-
123
- def _normalize_description(value: object) -> str:
124
- text = str(value or "").strip()
125
- return text
126
-
127
-
128
- def _normalize_tags(value: object) -> list[str]:
129
- if value is None:
130
- return []
131
- if isinstance(value, str):
132
- candidates = [value]
133
- elif isinstance(value, (list, tuple, set)):
134
- candidates = list(value)
135
- else:
136
- candidates = [value]
137
-
138
- tags: list[str] = []
139
- for candidate in candidates:
140
- tag = str(candidate or "").strip()
141
- if tag:
142
- tags.append(tag)
143
- return tags
144
-
145
-
146
- def _render_frontmatter(description: str, tags: list[str]) -> str:
147
- """Render YAML frontmatter block for a skill file."""
148
- if not description and not tags:
149
- return ""
150
- meta = {}
151
- if description:
152
- meta["description"] = description
153
- if tags:
154
- meta["tags"] = tags
155
- return f"---\n{yaml.dump(meta, default_flow_style=False).strip()}\n---\n"
156
-
157
-
158
- def _needs_metadata(meta: dict) -> bool:
159
- """Check if frontmatter is missing description or tags."""
160
- return not meta.get("description") or not meta.get("tags")
161
-
162
-
163
- def _strip_heading(name: str, content: str) -> str:
164
- lines = content.splitlines()
165
- if not lines:
166
- return ""
167
- match = _HEADING_RE.match(lines[0])
168
- if match and normalize_skill_name(match.group(1)) == normalize_skill_name(name):
169
- return "\n".join(lines[1:]).strip()
170
- return content.strip()
171
-
172
-
173
- def format_skill_file(name: str, content: str, *, description: str = "", tags: list[str] | None = None) -> str:
174
- """Format a skill as a markdown file with optional frontmatter and title heading."""
175
- valid_name = validate_skill_name(name)
176
- body = _strip_heading(valid_name, content)
177
- if not body:
178
- raise SkillError("Skill prompt cannot be empty.")
179
-
180
- frontmatter = _render_frontmatter(description, tags or [])
181
- formatted = f"{frontmatter}# {valid_name}\n\n{body.strip()}\n"
182
- _check_size(formatted)
183
- return formatted
184
-
185
-
186
- def read_skill(name: str, strip_heading: bool = True) -> str:
187
- """Read a skill body by name.
188
-
189
- Returns the prompt body without frontmatter or heading (unless strip_heading=False,
190
- in which case frontmatter is still stripped but heading is kept).
191
- """
192
- path = get_skill_path(name)
193
- if path.is_symlink():
194
- raise SkillError("Refusing to read a symlinked skill.")
195
- if not path.is_file():
196
- raise SkillError(f"Skill '{validate_skill_name(name)}' not found.")
197
- content = path.read_text(encoding="utf-8")
198
- _, body = _parse_frontmatter(content)
199
- if strip_heading:
200
- return _strip_heading(name, body)
201
- return body.strip()
202
-
203
-
204
- def write_skill(name: str, content: str, overwrite: bool = False) -> Path:
205
- """Create or replace a skill file.
206
-
207
- If the content contains YAML frontmatter with description and tags, those are
208
- preserved. Otherwise, metadata is auto-generated from the content via the LLM.
209
- """
210
- valid_name = validate_skill_name(name)
211
- path = get_skill_path(valid_name)
212
- if path.exists() and not overwrite:
213
- raise SkillError(f"Skill '{valid_name}' already exists.")
214
-
215
- # Parse any existing frontmatter from the content
216
- body = content
217
- description = ""
218
- tags: list[str] = []
219
-
220
- # Check if the raw content has frontmatter already
221
- raw_meta, raw_body = _parse_frontmatter(content)
222
- if raw_meta:
223
- description = _normalize_description(raw_meta.get("description", ""))
224
- tags = _normalize_tags(raw_meta.get("tags"))
225
- body = raw_body
226
-
227
- # If still missing metadata, try to preserve from existing file
228
- if _needs_metadata({"description": description, "tags": tags}) and path.is_file():
229
- existing_content = path.read_text(encoding="utf-8")
230
- existing_meta, _ = _parse_frontmatter(existing_content)
231
- if not description and existing_meta.get("description"):
232
- description = _normalize_description(existing_meta["description"])
233
- if not tags and existing_meta.get("tags"):
234
- tags = _normalize_tags(existing_meta.get("tags"))
235
-
236
- # If still missing, auto-generate
237
- if _needs_metadata({"description": description, "tags": tags}):
238
- prompt_body = _strip_heading(valid_name, body)
239
- if prompt_body:
240
- from core.metadata import generate_metadata
241
- generated = generate_metadata(prompt_body, valid_name)
242
- generated_description = _normalize_description(generated.get("description", ""))
243
- generated_tags = _normalize_tags(generated.get("tags"))
244
- if not description:
245
- description = generated_description
246
- if not tags:
247
- tags = generated_tags
248
-
249
- formatted = format_skill_file(valid_name, body, description=description, tags=tags)
250
- _atomic_write(path, formatted)
251
- return path
252
-
253
-
254
- def remove_skill(name: str) -> Path:
255
- """Remove a skill file."""
256
- path = get_skill_path(name)
257
- if not path.is_file():
258
- raise SkillError(f"Skill '{validate_skill_name(name)}' not found.")
259
- if path.is_symlink():
260
- raise SkillError("Refusing to remove a symlinked skill.")
261
- path.unlink()
262
- return path
263
-
264
-
265
- def list_skills(query: str | None = None) -> list[SkillSummary]:
266
- """List stored skills, optionally filtering by name/body preview."""
267
- return [match.item for match in search_skill_matches(query=query)]
268
-
269
-
270
- def iter_skill_summaries() -> list[SkillSummary]:
271
- """Return all valid stored skill summaries."""
272
- base = ensure_skills_dir()
273
- summaries: list[SkillSummary] = []
274
-
275
- for path in sorted(base.glob("*.md")):
276
- if not path.is_file() or path.is_symlink():
277
- continue
278
- try:
279
- name = validate_skill_name(path.stem)
280
- raw = path.read_text(encoding="utf-8")
281
- meta, body_text = _parse_frontmatter(raw)
282
- heading_stripped = _strip_heading(name, body_text)
283
- except SkillError:
284
- continue
285
-
286
- summaries.append(
287
- SkillSummary(
288
- name=name,
289
- path=path,
290
- preview=_preview(heading_stripped),
291
- modified=path.stat().st_mtime,
292
- description=_normalize_description(meta.get("description", "")),
293
- tags=_normalize_tags(meta.get("tags")),
294
- )
295
- )
296
- return summaries
297
-
298
-
299
- def search_candidates(
300
- query: str,
301
- candidates: list[SearchCandidate[T]],
302
- *,
303
- max_results: int = 5,
304
- item_key: Callable[[T], str] | None = None,
305
- ) -> list[SearchMatch[T]]:
306
- """Score and return matching candidates in descending relevance order."""
307
- query_text = (query or "").strip().lower()
308
- if not query_text:
309
- matches = [SearchMatch(item=candidate.item, score=0.0) for candidate in candidates]
310
- if item_key is not None:
311
- matches.sort(key=lambda match: item_key(match.item))
312
- return matches[:max_results]
313
-
314
- query_compact = _compact_match_text(query_text)
315
- query_terms = [term for term in query_text.split() if term]
316
- scored: list[SearchMatch[T]] = []
317
-
318
- for candidate in candidates:
319
- text = candidate.text.lower()
320
- compact_text = candidate.compact_text or _compact_match_text(text)
321
- exact_text = (candidate.exact_text or "").lower()
322
- score = 0.0
323
-
324
- if exact_text and query_text == exact_text:
325
- score += 120.0
326
- if exact_text and query_text in exact_text:
327
- score += 60.0
328
- if query_text in text:
329
- score += 40.0
330
- if query_compact and query_compact in compact_text:
331
- score += 25.0
332
-
333
- for term in query_terms:
334
- if exact_text and term in exact_text:
335
- score += 15.0
336
- if term in text:
337
- score += 10.0
338
-
339
- if score > 0:
340
- scored.append(SearchMatch(item=candidate.item, score=score))
341
-
342
- scored.sort(
343
- key=lambda match: (
344
- -match.score,
345
- item_key(match.item) if item_key is not None else "",
346
- )
347
- )
348
- return scored[:max_results]
349
-
350
-
351
- def search_skill_matches(query: str | None = None, max_results: int = 20) -> list[SearchMatch[SkillSummary]]:
352
- """Return scored skill matches for discovery surfaces."""
353
- skills = iter_skill_summaries()
354
- candidates = [
355
- SearchCandidate(
356
- item=skill,
357
- text=" ".join(
358
- part
359
- for part in [
360
- skill.name,
361
- skill.description,
362
- skill.preview,
363
- " ".join(skill.tags),
364
- ]
365
- if part
366
- ),
367
- compact_text=_compact_match_text(
368
- " ".join(
369
- part
370
- for part in [skill.name, skill.description, " ".join(skill.tags)]
371
- if part
372
- )
373
- ),
374
- exact_text=skill.name,
375
- )
376
- for skill in skills
377
- ]
378
- return search_candidates(
379
- query or "",
380
- candidates,
381
- max_results=max_results,
382
- item_key=lambda skill: skill.name,
383
- )
384
-
385
-
386
- def activate_skill(chat_manager, name: str, content: str | None = None, reload: bool = False) -> int:
387
- """Activate a skill in session state and refresh the system prompt."""
388
- valid_name = validate_skill_name(name)
389
- body = (content if content is not None else read_skill(valid_name)).strip()
390
- if not body:
391
- raise SkillError("Skill prompt cannot be empty.")
392
-
393
- loaded_skills = getattr(chat_manager, "loaded_skills", None)
394
- if loaded_skills is None:
395
- loaded_skills = set()
396
- setattr(chat_manager, "loaded_skills", loaded_skills)
397
- if valid_name in loaded_skills and not reload:
398
- raise SkillError(f"Skill '{valid_name}' is already active in this chat.")
399
-
400
- loaded_skills.add(valid_name)
401
- if hasattr(chat_manager, "update_system_prompt"):
402
- chat_manager.update_system_prompt()
403
- else:
404
- chat_manager._update_context_tokens()
405
-
406
- return chat_manager.token_tracker.estimate_tokens(render_active_skills_section([valid_name]))
407
-
408
-
409
- def get_active_skill_contents(skill_names: list[str] | set[str] | tuple[str, ...]) -> list[tuple[str, str]]:
410
- """Return validated active skill name/body pairs sorted by skill name."""
411
- active_skills = []
412
- for raw_name in sorted({validate_skill_name(name) for name in skill_names}):
413
- body = read_skill(raw_name)
414
- if body:
415
- active_skills.append((raw_name, body))
416
- return active_skills
417
-
418
-
419
- def render_active_skills_section(skill_names: list[str] | set[str] | tuple[str, ...]) -> str:
420
- """Render active skills for inclusion in the system prompt."""
421
- try:
422
- active_skills = get_active_skill_contents(skill_names)
423
- except SkillError:
424
- active_skills = []
425
- if not active_skills:
426
- return ""
427
-
428
- sections = ["## Active skills", "Apply these active skill instructions in addition to the base prompt."]
429
- for name, body in active_skills:
430
- sections.append(f"### {name}\n{body}")
431
- return "\n\n".join(sections)
432
-
433
-
434
- def _preview(content: str, max_chars: int = 90) -> str:
435
- text = " ".join(content.split())
436
- if len(text) <= max_chars:
437
- return text
438
- return text[: max_chars - 3].rstrip() + "..."
439
-
440
-
441
- def _compact_match_text(text: str) -> str:
442
- return re.sub(r"[^a-z0-9]+", "", (text or "").lower())
443
-
444
-
445
- def _atomic_write(path: Path, content: str) -> None:
446
- path.parent.mkdir(parents=True, exist_ok=True)
447
- fd, tmp_name = tempfile.mkstemp(
448
- prefix=f".{path.stem}.",
449
- suffix=".tmp",
450
- dir=str(path.parent),
451
- text=True,
452
- )
453
- tmp_path = Path(tmp_name)
454
- try:
455
- with os.fdopen(fd, "w", encoding="utf-8", newline="\n") as handle:
456
- handle.write(content)
457
- tmp_path.replace(path)
458
- except Exception:
459
- try:
460
- tmp_path.unlink()
461
- except OSError:
462
- pass
463
- raise