boltz-api 0.30.4 → 0.35.3

package/src/resources/predictions/predictions.ts

@@ -1,6 +1,18 @@
 // File generated from our OpenAPI spec by Stainless. See CONTRIBUTING.md for details.
 
 import { APIResource } from '../../core/resource';
+import * as AdmeAPI from './adme';
+import {
+  Adme,
+  AdmeDeleteDataResponse,
+  AdmeListParams,
+  AdmeListResponse,
+  AdmeListResponsesCursorPage,
+  AdmeRetrieveParams,
+  AdmeRetrieveResponse,
+  AdmeStartParams,
+  AdmeStartResponse,
+} from './adme';
 import * as StructureAndBindingAPI from './structure-and-binding';
 import {
   StructureAndBinding,
@@ -22,9 +34,11 @@ import {
 export class Predictions extends APIResource {
   structureAndBinding: StructureAndBindingAPI.StructureAndBinding =
     new StructureAndBindingAPI.StructureAndBinding(this._client);
+  adme: AdmeAPI.Adme = new AdmeAPI.Adme(this._client);
 }
 
 Predictions.StructureAndBinding = StructureAndBinding;
+Predictions.Adme = Adme;
 
 export declare namespace Predictions {
   export {
@@ -40,4 +54,16 @@ export declare namespace Predictions {
     type StructureAndBindingEstimateCostParams as StructureAndBindingEstimateCostParams,
     type StructureAndBindingStartParams as StructureAndBindingStartParams,
   };
+
+  export {
+    Adme as Adme,
+    type AdmeRetrieveResponse as AdmeRetrieveResponse,
+    type AdmeListResponse as AdmeListResponse,
+    type AdmeDeleteDataResponse as AdmeDeleteDataResponse,
+    type AdmeStartResponse as AdmeStartResponse,
+    type AdmeListResponsesCursorPage as AdmeListResponsesCursorPage,
+    type AdmeRetrieveParams as AdmeRetrieveParams,
+    type AdmeListParams as AdmeListParams,
+    type AdmeStartParams as AdmeStartParams,
+  };
 }

package/src/resources/predictions/structure-and-binding.ts

@@ -280,13 +280,11 @@ export namespace StructureAndBindingRetrieveResponse {
        * Post-translational modifications. Optional; defaults to an empty list when
        * omitted.
        */
-      modifications?: Array<
-        ProteinEntityResponse.CcdModificationResponse | ProteinEntityResponse.SmilesModificationResponse
-      >;
+      modifications?: Array<ProteinEntityResponse.Modification>;
     }
 
     export namespace ProteinEntityResponse {
-      export interface CcdModificationResponse {
+      export interface Modification {
         /**
          * 0-based index of the residue to modify
          */
@@ -300,20 +298,6 @@ export namespace StructureAndBindingRetrieveResponse {
          */
         value: string;
       }
-
-      export interface SmilesModificationResponse {
-        /**
-         * 0-based index of the residue to modify
-         */
-        residue_index: number;
-
-        type: 'smiles';
-
-        /**
-         * SMILES string for the modification
-         */
-        value: string;
-      }
     }
 
     export interface RnaEntityResponse {
@@ -337,13 +321,11 @@ export namespace StructureAndBindingRetrieveResponse {
       /**
        * Chemical modifications. Optional; defaults to an empty list when omitted.
        */
-      modifications?: Array<
-        RnaEntityResponse.CcdModificationResponse | RnaEntityResponse.SmilesModificationResponse
-      >;
+      modifications?: Array<RnaEntityResponse.Modification>;
     }
 
     export namespace RnaEntityResponse {
-      export interface CcdModificationResponse {
+      export interface Modification {
         /**
          * 0-based index of the residue to modify
          */
@@ -357,20 +339,6 @@ export namespace StructureAndBindingRetrieveResponse {
          */
         value: string;
       }
-
-      export interface SmilesModificationResponse {
-        /**
-         * 0-based index of the residue to modify
-         */
-        residue_index: number;
-
-        type: 'smiles';
-
-        /**
-         * SMILES string for the modification
-         */
-        value: string;
-      }
     }
 
     export interface DnaEntityResponse {
@@ -394,13 +362,11 @@ export namespace StructureAndBindingRetrieveResponse {
       /**
        * Chemical modifications. Optional; defaults to an empty list when omitted.
        */
-      modifications?: Array<
-        DnaEntityResponse.CcdModificationResponse | DnaEntityResponse.SmilesModificationResponse
-      >;
+      modifications?: Array<DnaEntityResponse.Modification>;
     }
 
     export namespace DnaEntityResponse {
-      export interface CcdModificationResponse {
+      export interface Modification {
         /**
          * 0-based index of the residue to modify
          */
@@ -414,20 +380,6 @@ export namespace StructureAndBindingRetrieveResponse {
          */
         value: string;
       }
-
-      export interface SmilesModificationResponse {
-        /**
-         * 0-based index of the residue to modify
-         */
-        residue_index: number;
-
-        type: 'smiles';
-
-        /**
-         * SMILES string for the modification
-         */
-        value: string;
-      }
     }
 
     export interface LigandCcdEntityResponse {
@@ -1200,13 +1152,11 @@ export namespace StructureAndBindingStartResponse {
        * Post-translational modifications. Optional; defaults to an empty list when
        * omitted.
        */
-      modifications?: Array<
-        ProteinEntityResponse.CcdModificationResponse | ProteinEntityResponse.SmilesModificationResponse
-      >;
+      modifications?: Array<ProteinEntityResponse.Modification>;
     }
 
     export namespace ProteinEntityResponse {
-      export interface CcdModificationResponse {
+      export interface Modification {
         /**
          * 0-based index of the residue to modify
          */
@@ -1220,20 +1170,6 @@ export namespace StructureAndBindingStartResponse {
          */
         value: string;
       }
-
-      export interface SmilesModificationResponse {
-        /**
-         * 0-based index of the residue to modify
-         */
-        residue_index: number;
-
-        type: 'smiles';
-
-        /**
-         * SMILES string for the modification
-         */
-        value: string;
-      }
     }
 
     export interface RnaEntityResponse {
@@ -1257,13 +1193,11 @@ export namespace StructureAndBindingStartResponse {
       /**
        * Chemical modifications. Optional; defaults to an empty list when omitted.
        */
-      modifications?: Array<
-        RnaEntityResponse.CcdModificationResponse | RnaEntityResponse.SmilesModificationResponse
-      >;
+      modifications?: Array<RnaEntityResponse.Modification>;
     }
 
     export namespace RnaEntityResponse {
-      export interface CcdModificationResponse {
+      export interface Modification {
         /**
          * 0-based index of the residue to modify
          */
@@ -1277,20 +1211,6 @@ export namespace StructureAndBindingStartResponse {
          */
         value: string;
       }
-
-      export interface SmilesModificationResponse {
-        /**
-         * 0-based index of the residue to modify
-         */
-        residue_index: number;
-
-        type: 'smiles';
-
-        /**
-         * SMILES string for the modification
-         */
-        value: string;
-      }
     }
 
     export interface DnaEntityResponse {
@@ -1314,13 +1234,11 @@ export namespace StructureAndBindingStartResponse {
       /**
        * Chemical modifications. Optional; defaults to an empty list when omitted.
        */
-      modifications?: Array<
-        DnaEntityResponse.CcdModificationResponse | DnaEntityResponse.SmilesModificationResponse
-      >;
+      modifications?: Array<DnaEntityResponse.Modification>;
     }
 
     export namespace DnaEntityResponse {
-      export interface CcdModificationResponse {
+      export interface Modification {
         /**
          * 0-based index of the residue to modify
          */
@@ -1334,20 +1252,6 @@ export namespace StructureAndBindingStartResponse {
          */
         value: string;
       }
-
-      export interface SmilesModificationResponse {
-        /**
-         * 0-based index of the residue to modify
-         */
-        residue_index: number;
-
-        type: 'smiles';
-
-        /**
-         * SMILES string for the modification
-         */
-        value: string;
-      }
     }
 
     export interface LigandCcdEntityResponse {
@@ -1928,11 +1832,11 @@ export namespace StructureAndBindingEstimateCostParams {
        * Post-translational modifications. Optional; defaults to an empty list when
        * omitted.
        */
-      modifications?: Array<ProteinEntity.CcdModification | ProteinEntity.SmilesModification>;
+      modifications?: Array<ProteinEntity.Modification>;
     }
 
     export namespace ProteinEntity {
-      export interface CcdModification {
+      export interface Modification {
         /**
          * 0-based index of the residue to modify
          */
@@ -1946,20 +1850,6 @@ export namespace StructureAndBindingEstimateCostParams {
          */
         value: string;
       }
-
-      export interface SmilesModification {
-        /**
-         * 0-based index of the residue to modify
-         */
-        residue_index: number;
-
-        type: 'smiles';
-
-        /**
-         * SMILES string for the modification
-         */
-        value: string;
-      }
     }
 
     export interface RnaEntity {
@@ -1983,11 +1873,11 @@ export namespace StructureAndBindingEstimateCostParams {
       /**
        * Chemical modifications. Optional; defaults to an empty list when omitted.
        */
-      modifications?: Array<RnaEntity.CcdModification | RnaEntity.SmilesModification>;
+      modifications?: Array<RnaEntity.Modification>;
     }
 
     export namespace RnaEntity {
-      export interface CcdModification {
+      export interface Modification {
         /**
          * 0-based index of the residue to modify
          */
@@ -2001,20 +1891,6 @@ export namespace StructureAndBindingEstimateCostParams {
          */
         value: string;
       }
-
-      export interface SmilesModification {
-        /**
-         * 0-based index of the residue to modify
-         */
-        residue_index: number;
-
-        type: 'smiles';
-
-        /**
-         * SMILES string for the modification
-         */
-        value: string;
-      }
     }
 
     export interface DnaEntity {
@@ -2038,11 +1914,11 @@ export namespace StructureAndBindingEstimateCostParams {
       /**
        * Chemical modifications. Optional; defaults to an empty list when omitted.
        */
-      modifications?: Array<DnaEntity.CcdModification | DnaEntity.SmilesModification>;
+      modifications?: Array<DnaEntity.Modification>;
     }
 
     export namespace DnaEntity {
-      export interface CcdModification {
+      export interface Modification {
         /**
          * 0-based index of the residue to modify
          */
@@ -2056,20 +1932,6 @@ export namespace StructureAndBindingEstimateCostParams {
          */
         value: string;
       }
-
-      export interface SmilesModification {
-        /**
-         * 0-based index of the residue to modify
-         */
-        residue_index: number;
-
-        type: 'smiles';
-
-        /**
-         * SMILES string for the modification
-         */
-        value: string;
-      }
     }
 
     export interface LigandCcdEntity {
@@ -2441,11 +2303,11 @@ export namespace StructureAndBindingStartParams {
        * Post-translational modifications. Optional; defaults to an empty list when
        * omitted.
        */
-      modifications?: Array<ProteinEntity.CcdModification | ProteinEntity.SmilesModification>;
+      modifications?: Array<ProteinEntity.Modification>;
     }
 
     export namespace ProteinEntity {
-      export interface CcdModification {
+      export interface Modification {
         /**
          * 0-based index of the residue to modify
          */
@@ -2459,20 +2321,6 @@ export namespace StructureAndBindingStartParams {
          */
         value: string;
       }
-
-      export interface SmilesModification {
-        /**
-         * 0-based index of the residue to modify
-         */
-        residue_index: number;
-
-        type: 'smiles';
-
-        /**
-         * SMILES string for the modification
-         */
-        value: string;
-      }
     }
 
     export interface RnaEntity {
@@ -2496,11 +2344,11 @@ export namespace StructureAndBindingStartParams {
       /**
        * Chemical modifications. Optional; defaults to an empty list when omitted.
        */
-      modifications?: Array<RnaEntity.CcdModification | RnaEntity.SmilesModification>;
+      modifications?: Array<RnaEntity.Modification>;
     }
 
     export namespace RnaEntity {
-      export interface CcdModification {
+      export interface Modification {
         /**
          * 0-based index of the residue to modify
          */
@@ -2514,20 +2362,6 @@ export namespace StructureAndBindingStartParams {
          */
         value: string;
       }
-
-      export interface SmilesModification {
-        /**
-         * 0-based index of the residue to modify
-         */
-        residue_index: number;
-
-        type: 'smiles';
-
-        /**
-         * SMILES string for the modification
-         */
-        value: string;
-      }
     }
 
     export interface DnaEntity {
@@ -2551,11 +2385,11 @@ export namespace StructureAndBindingStartParams {
       /**
        * Chemical modifications. Optional; defaults to an empty list when omitted.
        */
-      modifications?: Array<DnaEntity.CcdModification | DnaEntity.SmilesModification>;
+      modifications?: Array<DnaEntity.Modification>;
     }
 
     export namespace DnaEntity {
-      export interface CcdModification {
+      export interface Modification {
         /**
          * 0-based index of the residue to modify
          */
@@ -2569,20 +2403,6 @@ export namespace StructureAndBindingStartParams {
          */
         value: string;
       }
-
-      export interface SmilesModification {
-        /**
-         * 0-based index of the residue to modify
-         */
-        residue_index: number;
-
-        type: 'smiles';
-
-        /**
-         * SMILES string for the modification
-         */
-        value: string;
-      }
     }
 
     export interface LigandCcdEntity {