beth-copilot 1.0.18 → 1.1.0

package/dist/cli/commands/close.test.js.map

@@ -0,0 +1 @@
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package/dist/cli/commands/doctor.d.ts

@@ -7,10 +7,33 @@
  * - backlog.md CLI available
  * - .github/agents/ exists with valid frontmatter
  * - .github/skills/ exists
+ * - Dolt database hygiene (orphaned test databases, database count)
  */
 interface DoctorOptions {
     verbose?: boolean;
 }
+/** System databases that should be excluded from user database counts */
+export declare const SYSTEM_DBS: Set<string>;
+/** Maximum number of user databases before we warn */
+export declare const DB_COUNT_THRESHOLD = 5;
+/**
+ * Parse user database names from Dolt SHOW DATABASES output.
+ *
+ * Dolt outputs a table like:
+ * ```
+ * +--------------------+
+ * | Database           |
+ * +--------------------+
+ * | information_schema |
+ * | mysql              |
+ * | beth               |
+ * +--------------------+
+ * ```
+ *
+ * This function strips separator lines (`+---+`), the header row (`Database`),
+ * pipe characters, and system database names — returning only user databases.
+ */
+export declare function parseDoltDatabases(output: string): string[];
 /**
  * Main doctor command
  * @param options - Command options

package/dist/cli/commands/doctor.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"doctor.d.ts","sourceRoot":"","sources":["../../../src/cli/commands/doctor.ts"],"names":[],"mappings":"AAAA;;;;;;;;;GASG;AAkBH,UAAU,aAAa;IACrB,OAAO,CAAC,EAAE,OAAO,CAAC;CACnB;AA6MD;;;;GAIG;AACH,wBAAsB,MAAM,CAAC,OAAO,GAAE,aAAkB,EAAE,aAAa,UAAO,GAAG,OAAO,CAAC;IAAE,MAAM,EAAE,MAAM,CAAC;IAAC,MAAM,EAAE,MAAM,CAAC;IAAC,MAAM,EAAE,MAAM,CAAA;CAAE,CAAC,CA4C3I"}
+{"version":3,"file":"doctor.d.ts","sourceRoot":"","sources":["../../../src/cli/commands/doctor.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;GAUG;AAkBH,UAAU,aAAa;IACrB,OAAO,CAAC,EAAE,OAAO,CAAC;CACnB;AA6MD,yEAAyE;AACzE,eAAO,MAAM,UAAU,aAAmD,CAAC;AAE3E,sDAAsD;AACtD,eAAO,MAAM,kBAAkB,IAAI,CAAC;AAEpC;;;;;;;;;;;;;;;;GAgBG;AACH,wBAAgB,kBAAkB,CAAC,MAAM,EAAE,MAAM,GAAG,MAAM,EAAE,CAM3D;AAqED;;;;GAIG;AACH,wBAAsB,MAAM,CAAC,OAAO,GAAE,aAAkB,EAAE,aAAa,UAAO,GAAG,OAAO,CAAC;IAAE,MAAM,EAAE,MAAM,CAAC;IAAC,MAAM,EAAE,MAAM,CAAC;IAAC,MAAM,EAAE,MAAM,CAAA;CAAE,CAAC,CA6C3I"}

package/dist/cli/commands/doctor.js

@@ -7,6 +7,7 @@
  * - backlog.md CLI available
  * - .github/agents/ exists with valid frontmatter
  * - .github/skills/ exists
+ * - Dolt database hygiene (orphaned test databases, database count)
  */
 import { execSync } from 'child_process';
 import { existsSync, readdirSync, readFileSync } from 'fs';
@@ -191,6 +192,97 @@ function checkBeadsInit(cwd) {
         details: 'Run: bd init',
     };
 }
+/** System databases that should be excluded from user database counts */
+export const SYSTEM_DBS = new Set(['information_schema', 'mysql', 'dolt']);
+/** Maximum number of user databases before we warn */
+export const DB_COUNT_THRESHOLD = 5;
+/**
+ * Parse user database names from Dolt SHOW DATABASES output.
+ *
+ * Dolt outputs a table like:
+ * ```
+ * +--------------------+
+ * | Database           |
+ * +--------------------+
+ * | information_schema |
+ * | mysql              |
+ * | beth               |
+ * +--------------------+
+ * ```
+ *
+ * This function strips separator lines (`+---+`), the header row (`Database`),
+ * pipe characters, and system database names — returning only user databases.
+ */
+export function parseDoltDatabases(output) {
+    return output
+        .split('\n')
+        .map(line => line.replace(/^\|\s*|\s*\|$/g, '').trim())
+        .filter(line => line && !line.startsWith('+') && !line.startsWith('-') && line !== 'Database')
+        .filter(name => !SYSTEM_DBS.has(name));
+}
+/**
+ * Check Dolt for orphaned test databases and excessive database count.
+ * E2E tests can leave behind *_test_* databases if cleanup doesn't run.
+ * More than 5 databases usually indicates test pollution or forgotten experiments.
+ */
+function checkDoltDatabases(cwd) {
+    const results = [];
+    const doltDir = join(cwd, '.beads', 'dolt');
+    if (!existsSync(doltDir)) {
+        return [];
+    }
+    try {
+        const output = execSync('dolt sql -q "SHOW DATABASES;"', {
+            encoding: 'utf-8',
+            cwd: doltDir,
+            stdio: ['pipe', 'pipe', 'pipe'],
+        });
+        const databases = parseDoltDatabases(output);
+        // Check for orphaned test databases
+        const testDbs = databases.filter(name => /test/i.test(name));
+        if (testDbs.length > 0) {
+            results.push({
+                name: 'Dolt Test DBs',
+                status: 'warn',
+                message: `${testDbs.length} orphaned test database(s) found`,
+                details: `Orphaned: ${testDbs.join(', ')}. Clean up with: dolt sql -q "DROP DATABASE <name>;" from .beads/dolt/`,
+            });
+        }
+        else {
+            results.push({
+                name: 'Dolt Test DBs',
+                status: 'pass',
+                message: 'no orphaned test databases',
+            });
+        }
+        // Check total database count (user databases only)
+        if (databases.length > DB_COUNT_THRESHOLD) {
+            results.push({
+                name: 'Dolt DB Count',
+                status: 'warn',
+                message: `${databases.length} user databases (expected ≤${DB_COUNT_THRESHOLD})`,
+                details: `Databases: ${databases.join(', ')}. Investigate and drop unused databases.`,
+            });
+        }
+        else {
+            results.push({
+                name: 'Dolt DB Count',
+                status: 'pass',
+                message: `${databases.length} user database(s) (≤${DB_COUNT_THRESHOLD})`,
+            });
+        }
+    }
+    catch {
+        // Dolt not running or not accessible — skip these checks silently
+        results.push({
+            name: 'Dolt Hygiene',
+            status: 'warn',
+            message: 'could not query Dolt databases',
+            details: 'Dolt server may not be running. Start with: cd .beads/dolt && dolt sql-server &',
+        });
+    }
+    return results;
+}
 /**
  * Main doctor command
  * @param options - Command options
@@ -209,6 +301,7 @@ export async function doctor(options = {}, exitOnFailure = true) {
         checkAgents(cwd),
         checkSkills(cwd),
         checkBeadsInit(cwd),
+        ...checkDoltDatabases(cwd),
     ];
     // Display results
     for (const result of results) {

package/dist/cli/commands/doctor.js.map

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package/dist/cli/commands/doctor.test.js

@@ -8,6 +8,7 @@ import { execSync } from 'child_process';
 import { existsSync, mkdirSync, writeFileSync, rmSync } from 'fs';
 import { join } from 'path';
 import { tmpdir } from 'os';
+import { parseDoltDatabases, SYSTEM_DBS, DB_COUNT_THRESHOLD } from './doctor.js';
 // Test utilities - we can't import the private functions from doctor.ts
 // but we can test the overall behavior
 describe('doctor command integration', () => {
@@ -134,4 +135,212 @@ describe('CLI availability checks', () => {
         }
     });
 });
+describe('parseDoltDatabases', () => {
+    // Realistic Dolt SHOW DATABASES output with + separators
+    const TYPICAL_OUTPUT = [
+        '+--------------------+',
+        '| Database           |',
+        '+--------------------+',
+        '| information_schema |',
+        '| mysql              |',
+        '| dolt               |',
+        '| beth               |',
+        '+--------------------+',
+        '',
+    ].join('\n');
+    it('should extract user databases from typical Dolt output', () => {
+        const dbs = parseDoltDatabases(TYPICAL_OUTPUT);
+        assert.deepStrictEqual(dbs, ['beth']);
+    });
+    it('should filter out all system databases', () => {
+        const dbs = parseDoltDatabases(TYPICAL_OUTPUT);
+        for (const sysDb of SYSTEM_DBS) {
+            assert.ok(!dbs.includes(sysDb), `should not include system db '${sysDb}'`);
+        }
+    });
+    it('should filter out + separator lines', () => {
+        const output = [
+            '+----------+',
+            '| Database |',
+            '+----------+',
+            '| mydb     |',
+            '+----------+',
+        ].join('\n');
+        const dbs = parseDoltDatabases(output);
+        assert.deepStrictEqual(dbs, ['mydb']);
+    });
+    it('should filter out - separator lines', () => {
+        // Some Dolt versions or configurations may use dashes
+        const output = [
+            '+-----------+',
+            '| Database  |',
+            '+-----------+',
+            '| mydb      |',
+            '- note line -',
+            '+-----------+',
+        ].join('\n');
+        const dbs = parseDoltDatabases(output);
+        assert.deepStrictEqual(dbs, ['mydb']);
+    });
+    it('should filter out the header row', () => {
+        const output = [
+            '+----------+',
+            '| Database |',
+            '+----------+',
+            '| app      |',
+            '+----------+',
+        ].join('\n');
+        const dbs = parseDoltDatabases(output);
+        assert.ok(!dbs.includes('Database'), "should not include the header 'Database'");
+        assert.deepStrictEqual(dbs, ['app']);
+    });
+    it('should handle multiple user databases', () => {
+        const output = [
+            '+--------------------+',
+            '| Database           |',
+            '+--------------------+',
+            '| information_schema |',
+            '| mysql              |',
+            '| dolt               |',
+            '| beth               |',
+            '| staging            |',
+            '| experiment         |',
+            '+--------------------+',
+        ].join('\n');
+        const dbs = parseDoltDatabases(output);
+        assert.deepStrictEqual(dbs, ['beth', 'staging', 'experiment']);
+    });
+    it('should return empty array when only system databases exist', () => {
+        const output = [
+            '+--------------------+',
+            '| Database           |',
+            '+--------------------+',
+            '| information_schema |',
+            '| mysql              |',
+            '| dolt               |',
+            '+--------------------+',
+        ].join('\n');
+        const dbs = parseDoltDatabases(output);
+        assert.deepStrictEqual(dbs, []);
+    });
+    it('should return empty array for empty output', () => {
+        const dbs = parseDoltDatabases('');
+        assert.deepStrictEqual(dbs, []);
+    });
+    it('should return empty array for whitespace-only output', () => {
+        const dbs = parseDoltDatabases('  \n  \n  ');
+        assert.deepStrictEqual(dbs, []);
+    });
+    it('should handle trailing newlines', () => {
+        const output = [
+            '+----------+',
+            '| Database |',
+            '+----------+',
+            '| mydb     |',
+            '+----------+',
+            '',
+            '',
+        ].join('\n');
+        const dbs = parseDoltDatabases(output);
+        assert.deepStrictEqual(dbs, ['mydb']);
+    });
+    it('should handle database names with test in them', () => {
+        const output = [
+            '+--------------------+',
+            '| Database           |',
+            '+--------------------+',
+            '| information_schema |',
+            '| beth               |',
+            '| beth_test_abc      |',
+            '| test_pollution     |',
+            '| my_Testing_db      |',
+            '+--------------------+',
+        ].join('\n');
+        const dbs = parseDoltDatabases(output);
+        // parseDoltDatabases just parses — it doesn't classify test DBs.
+        // That's the caller's job. All non-system DBs should be returned.
+        assert.deepStrictEqual(dbs, ['beth', 'beth_test_abc', 'test_pollution', 'my_Testing_db']);
+    });
+    it('should strip pipe characters and whitespace from database names', () => {
+        const output = [
+            '+--------------------+',
+            '| Database           |',
+            '+--------------------+',
+            '|   spacey_db        |',
+            '| beth               |',
+            '+--------------------+',
+        ].join('\n');
+        const dbs = parseDoltDatabases(output);
+        assert.deepStrictEqual(dbs, ['spacey_db', 'beth']);
+    });
+    it('should handle + separators with varying column widths', () => {
+        const output = [
+            '+------+',
+            '| Database |',
+            '+------+',
+            '| a    |',
+            '| bb   |',
+            '+------+',
+        ].join('\n');
+        const dbs = parseDoltDatabases(output);
+        assert.deepStrictEqual(dbs, ['a', 'bb']);
+    });
+});
+describe('parseDoltDatabases integration with checkDoltDatabases logic', () => {
+    it('should correctly identify orphaned test databases', () => {
+        const output = [
+            '+--------------------+',
+            '| Database           |',
+            '+--------------------+',
+            '| information_schema |',
+            '| beth               |',
+            '| e2e_test_run1      |',
+            '| TEST_LEFTOVERS     |',
+            '| production         |',
+            '+--------------------+',
+        ].join('\n');
+        const databases = parseDoltDatabases(output);
+        const testDbs = databases.filter(name => /test/i.test(name));
+        assert.deepStrictEqual(testDbs, ['e2e_test_run1', 'TEST_LEFTOVERS']);
+    });
+    it('should trigger DB count warning when threshold exceeded', () => {
+        const userDbs = Array.from({ length: DB_COUNT_THRESHOLD + 2 }, (_, i) => `db_${i}`);
+        const lines = [
+            '+----------+',
+            '| Database |',
+            '+----------+',
+            '| information_schema |',
+            '| mysql    |',
+            '| dolt     |',
+            ...userDbs.map(db => `| ${db}     |`),
+            '+----------+',
+        ];
+        const databases = parseDoltDatabases(lines.join('\n'));
+        assert.ok(databases.length > DB_COUNT_THRESHOLD, `${databases.length} databases should exceed threshold of ${DB_COUNT_THRESHOLD}`);
+    });
+    it('should not trigger DB count warning at or below threshold', () => {
+        const userDbs = Array.from({ length: DB_COUNT_THRESHOLD }, (_, i) => `db_${i}`);
+        const lines = [
+            '+----------+',
+            '| Database |',
+            '+----------+',
+            '| information_schema |',
+            ...userDbs.map(db => `| ${db}     |`),
+            '+----------+',
+        ];
+        const databases = parseDoltDatabases(lines.join('\n'));
+        assert.ok(databases.length <= DB_COUNT_THRESHOLD, `${databases.length} databases should not exceed threshold of ${DB_COUNT_THRESHOLD}`);
+    });
+});
+describe('exported constants', () => {
+    it('SYSTEM_DBS should contain expected system databases', () => {
+        assert.ok(SYSTEM_DBS.has('information_schema'));
+        assert.ok(SYSTEM_DBS.has('mysql'));
+        assert.ok(SYSTEM_DBS.has('dolt'));
+        assert.strictEqual(SYSTEM_DBS.size, 3);
+    });
+    it('DB_COUNT_THRESHOLD should be 5', () => {
+        assert.strictEqual(DB_COUNT_THRESHOLD, 5);
+    });
+});
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package/dist/cli/commands/framework-isolation.test.d.ts

@@ -0,0 +1,30 @@
+/**
+ * Dual-framework isolation audit tests.
+ *
+ * beth-ywg.6: beads.e2e.test.ts and quickstart.test.ts mix node:test and vitest
+ * imports. This file validates that the vitest config alias ('node:test' → 'vitest')
+ * works correctly and that lifecycle hooks fire in the expected order.
+ *
+ * Repro steps:
+ *   1. Run: npx vitest run src/cli/commands/framework-isolation.test.ts
+ *
+ * Background:
+ *   The vitest.config.ts has: resolve.alias['node:test'] = 'vitest'
+ *   This means `import { describe, it } from 'node:test'` actually imports from vitest.
+ *   But `import { beforeAll } from 'vitest'` is a direct vitest import.
+ *   Mixing both in the same file is risky — lifecycle hooks from different
+ *   module identities might not share state.
+ *
+ * Test cases:
+ *   - Verify the vitest alias resolves correctly
+ *   - Verify describe/it from 'node:test' work under vitest
+ *   - Verify beforeEach/afterEach from 'node:test' fire in order
+ *   - Verify beforeAll from 'vitest' runs before all tests
+ *   - Verify mixed imports don't create duplicate hook registrations
+ *   - Verify assert from 'node:assert' works alongside vitest expect
+ *   - Document which files currently mix frameworks
+ *
+ * Expected outcomes documented inline per test case.
+ */
+export {};
+//# sourceMappingURL=framework-isolation.test.d.ts.map

package/dist/cli/commands/framework-isolation.test.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"framework-isolation.test.d.ts","sourceRoot":"","sources":["../../../src/cli/commands/framework-isolation.test.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;;;;;;;GA2BG"}