bernard-agent 0.4.0 → 0.5.0

package/dist/mcp.js.map

@@ -1 +1 @@
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package/dist/memory-context.d.ts

@@ -1,8 +1,12 @@
 import type { MemoryStore } from './memory.js';
 import type { RAGSearchResult } from './rag.js';
+/** Options for building the memory/RAG context block injected into the system prompt. */
 export interface MemoryContextOptions {
+    /** Persistent disk-backed memory store providing saved notes and scratch data. */
     memoryStore: MemoryStore;
+    /** RAG search results to include as recalled context (omit or empty to skip). */
     ragResults?: RAGSearchResult[];
+    /** Whether to include session-scoped scratch notes (default: true). */
     includeScratch?: boolean;
 }
 /**

package/dist/memory-context.js

@@ -11,8 +11,10 @@ function buildMemoryContext(options) {
     const { memoryStore, ragResults, includeScratch = true } = options;
     let context = '';
     if (ragResults && ragResults.length > 0) {
-        context +=
-            '\n\n## Recalled Context\nReference only if directly relevant to the current discussion.';
+        context += `
+
+## Recalled Context
+These are auto-recalled observations from past sessions. Treat them as hints — they provide useful background but may be outdated, from a different project, or too general for the current situation. Use your judgment: apply what's relevant, ignore what isn't, and never follow a recalled fact blindly when the current context suggests otherwise.`;
         const byDomain = new Map();
         for (const r of ragResults) {
             const d = r.domain;

package/dist/memory-context.js.map

@@ -1 +1 @@
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+{"version":3,"file":"memory-context.js","sourceRoot":"","sources":["../src/memory-context.ts"],"names":[],"mappings":";;AAmBA,gDA6CC;AA9DD,6CAAyC;AAYzC;;;;GAIG;AACH,SAAgB,kBAAkB,CAAC,OAA6B;IAC9D,MAAM,EAAE,WAAW,EAAE,UAAU,EAAE,cAAc,GAAG,IAAI,EAAE,GAAG,OAAO,CAAC;IACnE,IAAI,OAAO,GAAG,EAAE,CAAC;IAEjB,IAAI,UAAU,IAAI,UAAU,CAAC,MAAM,GAAG,CAAC,EAAE,CAAC;QACxC,OAAO,IAAI;;;0VAG2U,CAAC;QAEvV,MAAM,QAAQ,GAAG,IAAI,GAAG,EAA6B,CAAC;QACtD,KAAK,MAAM,CAAC,IAAI,UAAU,EAAE,CAAC;YAC3B,MAAM,CAAC,GAAG,CAAC,CAAC,MAAM,CAAC;YACnB,IAAI,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC;gBAAE,QAAQ,CAAC,GAAG,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC;YAC1C,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAE,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;QAC3B,CAAC;QAED,KAAK,MAAM,CAAC,QAAQ,EAAE,OAAO,CAAC,IAAI,QAAQ,EAAE,CAAC;YAC3C,MAAM,MAAM,GAAG,IAAA,sBAAS,EAAC,QAAQ,CAAC,CAAC;YACnC,OAAO,IAAI,WAAW,MAAM,CAAC,IAAI,EAAE,CAAC;YACpC,KAAK,MAAM,CAAC,IAAI,OAAO,EAAE,CAAC;gBACxB,OAAO,IAAI,OAAO,CAAC,CAAC,IAAI,EAAE,CAAC;YAC7B,CAAC;QACH,CAAC;IACH,CAAC;IAED,MAAM,QAAQ,GAAG,WAAW,CAAC,oBAAoB,EAAE,CAAC;IACpD,IAAI,QAAQ,CAAC,IAAI,GAAG,CAAC,EAAE,CAAC;QACtB,OAAO,IAAI,4BAA4B,CAAC;QACxC,KAAK,MAAM,CAAC,GAAG,EAAE,OAAO,CAAC,IAAI,QAAQ,EAAE,CAAC;YACtC,OAAO,IAAI,SAAS,GAAG,KAAK,OAAO,IAAI,CAAC;QAC1C,CAAC;IACH,CAAC;IAED,IAAI,cAAc,EAAE,CAAC;QACnB,MAAM,OAAO,GAAG,WAAW,CAAC,qBAAqB,EAAE,CAAC;QACpD,IAAI,OAAO,CAAC,IAAI,GAAG,CAAC,EAAE,CAAC;YACrB,OAAO,IAAI,uCAAuC,CAAC;YACnD,KAAK,MAAM,CAAC,GAAG,EAAE,OAAO,CAAC,IAAI,OAAO,EAAE,CAAC;gBACrC,OAAO,IAAI,SAAS,GAAG,KAAK,OAAO,IAAI,CAAC;YAC1C,CAAC;QACH,CAAC;IACH,CAAC;IAED,OAAO,OAAO,CAAC;AACjB,CAAC"}

package/dist/memory.d.ts

@@ -1,17 +1,34 @@
 /** @internal */
 export declare function sanitizeKey(key: string): string;
+/**
+ * Dual-layer store providing disk-backed persistent memory and ephemeral in-memory scratch notes.
+ *
+ * Persistent memory is stored as individual Markdown files in the data directory.
+ * Scratch notes live only for the current session and are discarded on exit.
+ */
 export declare class MemoryStore {
     private scratch;
     constructor();
+    /** Returns the keys of all persistent memory entries (filenames without `.md` extension). */
     listMemory(): string[];
+    /** Reads a persistent memory entry by key, returning `null` if it does not exist. */
     readMemory(key: string): string | null;
+    /** Creates or overwrites a persistent memory entry on disk. */
     writeMemory(key: string, content: string): void;
+    /** Deletes a persistent memory entry. Returns `true` if the entry existed and was removed. */
     deleteMemory(key: string): boolean;
+    /** Returns all persistent memory entries as a key-content map. */
     getAllMemoryContents(): Map<string, string>;
+    /** Returns the keys of all scratch notes in the current session. */
     listScratch(): string[];
+    /** Reads a scratch note by key, returning `null` if it does not exist. */
     readScratch(key: string): string | null;
+    /** Creates or overwrites a scratch note for the current session. */
     writeScratch(key: string, content: string): void;
+    /** Deletes a scratch note. Returns `true` if the note existed and was removed. */
     deleteScratch(key: string): boolean;
+    /** Returns a shallow copy of all scratch notes as a key-content map. */
     getAllScratchContents(): Map<string, string>;
+    /** Removes all scratch notes from the current session. */
     clearScratch(): void;
 }

package/dist/memory.js

@@ -37,39 +37,49 @@ exports.MemoryStore = void 0;
 exports.sanitizeKey = sanitizeKey;
 const fs = __importStar(require("node:fs"));
 const path = __importStar(require("node:path"));
-const os = __importStar(require("node:os"));
-const MEMORY_DIR = path.join(os.homedir(), '.bernard', 'memory');
+const paths_js_1 = require("./paths.js");
 /** @internal */
 function sanitizeKey(key) {
     return key.replace(/[^a-zA-Z0-9_-]/g, '');
 }
+/**
+ * Dual-layer store providing disk-backed persistent memory and ephemeral in-memory scratch notes.
+ *
+ * Persistent memory is stored as individual Markdown files in the data directory.
+ * Scratch notes live only for the current session and are discarded on exit.
+ */
 class MemoryStore {
     scratch = new Map();
     constructor() {
-        fs.mkdirSync(MEMORY_DIR, { recursive: true });
+        fs.mkdirSync(paths_js_1.MEMORY_DIR, { recursive: true });
     }
     // --- Persistent Memory (disk-backed) ---
+    /** Returns the keys of all persistent memory entries (filenames without `.md` extension). */
     listMemory() {
-        const files = fs.readdirSync(MEMORY_DIR);
+        const files = fs.readdirSync(paths_js_1.MEMORY_DIR);
         return files.filter((f) => f.endsWith('.md')).map((f) => f.replace(/\.md$/, ''));
     }
+    /** Reads a persistent memory entry by key, returning `null` if it does not exist. */
     readMemory(key) {
-        const filePath = path.join(MEMORY_DIR, `${sanitizeKey(key)}.md`);
+        const filePath = path.join(paths_js_1.MEMORY_DIR, `${sanitizeKey(key)}.md`);
         if (!fs.existsSync(filePath))
             return null;
         return fs.readFileSync(filePath, 'utf-8');
     }
+    /** Creates or overwrites a persistent memory entry on disk. */
     writeMemory(key, content) {
-        const filePath = path.join(MEMORY_DIR, `${sanitizeKey(key)}.md`);
+        const filePath = path.join(paths_js_1.MEMORY_DIR, `${sanitizeKey(key)}.md`);
         fs.writeFileSync(filePath, content, 'utf-8');
     }
+    /** Deletes a persistent memory entry. Returns `true` if the entry existed and was removed. */
     deleteMemory(key) {
-        const filePath = path.join(MEMORY_DIR, `${sanitizeKey(key)}.md`);
+        const filePath = path.join(paths_js_1.MEMORY_DIR, `${sanitizeKey(key)}.md`);
         if (!fs.existsSync(filePath))
             return false;
         fs.unlinkSync(filePath);
         return true;
     }
+    /** Returns all persistent memory entries as a key-content map. */
     getAllMemoryContents() {
         const result = new Map();
         for (const key of this.listMemory()) {
@@ -81,21 +91,27 @@ class MemoryStore {
         return result;
     }
     // --- Scratch Notes (in-memory, session only) ---
+    /** Returns the keys of all scratch notes in the current session. */
     listScratch() {
         return Array.from(this.scratch.keys());
     }
+    /** Reads a scratch note by key, returning `null` if it does not exist. */
     readScratch(key) {
         return this.scratch.get(key) ?? null;
     }
+    /** Creates or overwrites a scratch note for the current session. */
     writeScratch(key, content) {
         this.scratch.set(key, content);
     }
+    /** Deletes a scratch note. Returns `true` if the note existed and was removed. */
     deleteScratch(key) {
         return this.scratch.delete(key);
     }
+    /** Returns a shallow copy of all scratch notes as a key-content map. */
     getAllScratchContents() {
         return new Map(this.scratch);
     }
+    /** Removes all scratch notes from the current session. */
     clearScratch() {
         this.scratch.clear();
     }

package/dist/memory.js.map

@@ -1 +1 @@
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package/dist/migrate.d.ts

@@ -0,0 +1,13 @@
+/**
+ * Migrate files from the legacy `~/.bernard/` layout to XDG directories.
+ *
+ * - No-op if `BERNARD_HOME` is set (user explicitly controls layout)
+ * - No-op if `~/.bernard/` does not exist (fresh install)
+ * - No-op if already migrated (MIGRATED marker exists or prefs in XDG location)
+ *
+ * @returns Object with `migrated` flag and any non-fatal `errors` encountered.
+ */
+export declare function migrateFromLegacy(): {
+    migrated: boolean;
+    errors: string[];
+};

package/dist/migrate.js

@@ -0,0 +1,209 @@
+"use strict";
+var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    var desc = Object.getOwnPropertyDescriptor(m, k);
+    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
+      desc = { enumerable: true, get: function() { return m[k]; } };
+    }
+    Object.defineProperty(o, k2, desc);
+}) : (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    o[k2] = m[k];
+}));
+var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
+    Object.defineProperty(o, "default", { enumerable: true, value: v });
+}) : function(o, v) {
+    o["default"] = v;
+});
+var __importStar = (this && this.__importStar) || (function () {
+    var ownKeys = function(o) {
+        ownKeys = Object.getOwnPropertyNames || function (o) {
+            var ar = [];
+            for (var k in o) if (Object.prototype.hasOwnProperty.call(o, k)) ar[ar.length] = k;
+            return ar;
+        };
+        return ownKeys(o);
+    };
+    return function (mod) {
+        if (mod && mod.__esModule) return mod;
+        var result = {};
+        if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
+        __setModuleDefault(result, mod);
+        return result;
+    };
+})();
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.migrateFromLegacy = migrateFromLegacy;
+const fs = __importStar(require("node:fs"));
+const path = __importStar(require("node:path"));
+const paths_js_1 = require("./paths.js");
+const MIGRATED_MARKER = path.join(paths_js_1.LEGACY_DIR, 'MIGRATED');
+/** File-to-XDG-category mapping for migration. */
+const MIGRATION_MAP = [
+    // Config files
+    { src: 'preferences.json', destDir: paths_js_1.CONFIG_DIR },
+    { src: 'keys.json', destDir: paths_js_1.CONFIG_DIR, mode: 0o600 },
+    { src: '.env', destDir: paths_js_1.CONFIG_DIR },
+    { src: 'mcp.json', destDir: paths_js_1.CONFIG_DIR },
+    // Cache files
+    { src: 'update-check.json', destDir: paths_js_1.CACHE_DIR },
+    // State files
+    { src: 'conversation-history.json', destDir: paths_js_1.STATE_DIR },
+];
+/** Directory-to-XDG-category mapping for migration. */
+const DIR_MIGRATION_MAP = [
+    // Data directories
+    { src: 'memory', destDir: path.join(paths_js_1.DATA_DIR, 'memory') },
+    { src: 'rag', destDir: path.join(paths_js_1.DATA_DIR, 'rag') },
+    { src: 'cron', destDir: path.join(paths_js_1.DATA_DIR, 'cron') },
+    // Cache directories
+    { src: 'models', destDir: path.join(paths_js_1.CACHE_DIR, 'models') },
+    // State directories
+    { src: 'logs', destDir: path.join(paths_js_1.STATE_DIR, 'logs') },
+];
+/**
+ * Move a single file, falling back to copy+delete on cross-filesystem (EXDEV) errors.
+ * Creates destination directory if needed.
+ */
+function moveFile(src, dest, mode) {
+    const destDir = path.dirname(dest);
+    fs.mkdirSync(destDir, { recursive: true, mode: 0o700 });
+    try {
+        fs.renameSync(src, dest);
+    }
+    catch (err) {
+        if (err.code === 'EXDEV') {
+            fs.copyFileSync(src, dest);
+            fs.unlinkSync(src);
+        }
+        else {
+            throw err;
+        }
+    }
+    if (mode !== undefined) {
+        fs.chmodSync(dest, mode);
+    }
+}
+/**
+ * Recursively move a directory's contents to a new location.
+ * Creates the destination directory structure as needed.
+ */
+function moveDir(srcDir, destDir) {
+    if (!fs.existsSync(srcDir))
+        return;
+    fs.mkdirSync(destDir, { recursive: true, mode: 0o700 });
+    const entries = fs.readdirSync(srcDir, { withFileTypes: true });
+    for (const entry of entries) {
+        const srcPath = path.join(srcDir, entry.name);
+        const destPath = path.join(destDir, entry.name);
+        if (entry.isDirectory()) {
+            moveDir(srcPath, destPath);
+        }
+        else {
+            moveFile(srcPath, destPath);
+        }
+    }
+    // Remove the now-empty source directory
+    try {
+        fs.rmdirSync(srcDir);
+    }
+    catch {
+        // May not be empty if some files failed; ignore
+    }
+}
+/**
+ * Migrate files from the legacy `~/.bernard/` layout to XDG directories.
+ *
+ * - No-op if `BERNARD_HOME` is set (user explicitly controls layout)
+ * - No-op if `~/.bernard/` does not exist (fresh install)
+ * - No-op if already migrated (MIGRATED marker exists or prefs in XDG location)
+ *
+ * @returns Object with `migrated` flag and any non-fatal `errors` encountered.
+ */
+function migrateFromLegacy() {
+    const errors = [];
+    // Skip if user explicitly controls layout
+    if (process.env.BERNARD_HOME) {
+        return { migrated: false, errors };
+    }
+    // Skip if legacy dir doesn't exist (fresh install)
+    if (!fs.existsSync(paths_js_1.LEGACY_DIR)) {
+        return { migrated: false, errors };
+    }
+    // Skip if already migrated
+    if (fs.existsSync(MIGRATED_MARKER)) {
+        return { migrated: false, errors };
+    }
+    if (fs.existsSync(paths_js_1.CONFIG_DIR)) {
+        try {
+            const entries = fs.readdirSync(paths_js_1.CONFIG_DIR);
+            if (entries.length > 0) {
+                return { migrated: false, errors };
+            }
+        }
+        catch {
+            /* proceed with migration */
+        }
+    }
+    // Ensure XDG base directories exist with 0700
+    for (const dir of [paths_js_1.CONFIG_DIR, paths_js_1.DATA_DIR, paths_js_1.CACHE_DIR, paths_js_1.STATE_DIR]) {
+        fs.mkdirSync(dir, { recursive: true, mode: 0o700 });
+    }
+    // Migrate individual files
+    for (const entry of MIGRATION_MAP) {
+        const srcPath = path.join(paths_js_1.LEGACY_DIR, entry.src);
+        if (!fs.existsSync(srcPath))
+            continue;
+        try {
+            const destPath = path.join(entry.destDir, entry.src);
+            moveFile(srcPath, destPath, entry.mode);
+        }
+        catch (err) {
+            const msg = `Failed to migrate ${entry.src}: ${err instanceof Error ? err.message : String(err)}`;
+            errors.push(msg);
+        }
+    }
+    // Migrate directories
+    for (const entry of DIR_MIGRATION_MAP) {
+        const srcPath = path.join(paths_js_1.LEGACY_DIR, entry.src);
+        if (!fs.existsSync(srcPath))
+            continue;
+        try {
+            moveDir(srcPath, entry.destDir);
+        }
+        catch (err) {
+            const msg = `Failed to migrate ${entry.src}/: ${err instanceof Error ? err.message : String(err)}`;
+            errors.push(msg);
+        }
+    }
+    // Also move the daemon PID and log from cron/ to state (they lived under cron/ in legacy)
+    for (const file of ['daemon.pid', 'daemon.log']) {
+        const srcPath = path.join(paths_js_1.DATA_DIR, 'cron', file);
+        if (!fs.existsSync(srcPath))
+            continue;
+        try {
+            const destName = file === 'daemon.pid' ? 'cron-daemon.pid' : 'cron-daemon.log';
+            moveFile(srcPath, path.join(paths_js_1.STATE_DIR, destName));
+        }
+        catch (err) {
+            const msg = `Failed to relocate cron/${file}: ${err instanceof Error ? err.message : String(err)}`;
+            errors.push(msg);
+        }
+    }
+    // Leave marker explaining the migration
+    try {
+        fs.writeFileSync(MIGRATED_MARKER, 'Bernard files have been migrated to XDG Base Directory locations.\n' +
+            'See: https://specifications.freedesktop.org/basedir/latest/\n' +
+            `Config: ${paths_js_1.CONFIG_DIR}\n` +
+            `Data:   ${paths_js_1.DATA_DIR}\n` +
+            `Cache:  ${paths_js_1.CACHE_DIR}\n` +
+            `State:  ${paths_js_1.STATE_DIR}\n`);
+    }
+    catch {
+        // Non-critical
+    }
+    // Print one-line notice to stderr
+    process.stderr.write(`bernard: migrated data from ~/.bernard/ to XDG directories (see ~/.bernard/MIGRATED)\n`);
+    return { migrated: true, errors };
+}
+//# sourceMappingURL=migrate.js.map

package/dist/migrate.js.map

@@ -0,0 +1 @@
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package/dist/output.d.ts

@@ -1,21 +1,66 @@
 import type { CoreMessage } from 'ai';
+/** Cumulative token-usage statistics displayed alongside the thinking spinner. */
 export interface SpinnerStats {
+    /** Epoch timestamp (ms) when the current agent step began. */
     startTime: number;
+    /** Running total of prompt tokens consumed across all steps. */
     totalPromptTokens: number;
+    /** Running total of completion tokens generated across all steps. */
     totalCompletionTokens: number;
+    /** Prompt tokens for the most recent LLM call (used for compression headroom). */
     latestPromptTokens: number;
+    /** Model identifier, used to look up the context-window size. */
     model: string;
 }
+/**
+ * Builds the dynamic status text shown next to the spinner animation.
+ *
+ * Displays elapsed time, cumulative token counts (up/down arrows),
+ * and percentage of context window remaining before compression triggers.
+ */
 export declare function buildSpinnerMessage(stats: SpinnerStats): string;
+/**
+ * Starts a braille-dot spinner animation on stdout.
+ *
+ * Hides the cursor and redraws at 80 ms intervals. If a spinner is already
+ * running the call is a no-op. Call {@link stopSpinner} to clear it.
+ *
+ * @param message - Static string or callback returning a dynamic status line.
+ */
 export declare function startSpinner(message?: string | (() => string)): void;
+/** Stops the spinner, clears its line, and restores the cursor. */
 export declare function stopSpinner(): void;
+/** Prints the branded welcome banner with provider, model, and optional version info. */
 export declare function printWelcome(provider: string, model: string, version?: string): void;
+/** Prints an assistant response, stopping any active spinner first. */
 export declare function printAssistantText(text: string, prefix?: string): void;
+/**
+ * Prints a one-line summary of a tool invocation.
+ *
+ * For the `shell` tool the raw command string is shown; for all others
+ * the args object is JSON-serialized.
+ */
 export declare function printToolCall(toolName: string, args: Record<string, unknown>, prefix?: string): void;
+/**
+ * Prints a tool's return value, truncated to {@link MAX_TOOL_OUTPUT_LENGTH} characters.
+ *
+ * Handles string results, `{ output: string }` shapes, and arbitrary objects.
+ */
 export declare function printToolResult(toolName: string, result: unknown, prefix?: string): void;
+/** Prints an error message to stderr in the theme's error color. */
 export declare function printError(message: string): void;
+/** Prints an informational message in the theme's muted color. */
 export declare function printInfo(message: string): void;
+/**
+ * Prints a dimmed summary of a prior conversation for session-resume context.
+ *
+ * Each message is truncated to {@link MAX_REPLAY_LENGTH} characters.
+ * Tool-role messages are skipped.
+ */
 export declare function printConversationReplay(messages: CoreMessage[]): void;
+/** Prints a colored top-border line when a sub-agent begins executing a task. */
 export declare function printSubAgentStart(id: number, task: string): void;
+/** Prints a colored bottom-border line when a sub-agent finishes. */
 export declare function printSubAgentEnd(id: number): void;
+/** Prints the REPL help menu listing all available slash commands. */
 export declare function printHelp(): void;