bdsa-react-components 0.1.19 → 0.1.21

package/dist/components/FolderBrowser/FolderBrowser.render.d.ts

@@ -0,0 +1,12 @@
+import { default as React } from 'react';
+import { Item } from './FolderBrowser.types';
+
+export interface RenderItemNodeParams {
+    item: Item;
+    depth: number;
+    isSelected: boolean;
+    onItemSelect: (item: Item) => void;
+    renderItem?: (item: Item, depth: number) => React.ReactNode;
+}
+export declare function renderItemNodeContent({ item, depth, isSelected, onItemSelect, renderItem, }: RenderItemNodeParams): React.ReactNode;
+//# sourceMappingURL=FolderBrowser.render.d.ts.map

package/dist/components/FolderBrowser/FolderBrowser.render.d.ts.map

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package/dist/components/FolderBrowser/FolderBrowser.types.d.ts

@@ -0,0 +1,94 @@
+import { default as React } from 'react';
+export interface Collection {
+    _id: string;
+    name: string;
+    description?: string;
+    public?: boolean;
+    created?: string;
+    updated?: string;
+    [key: string]: unknown;
+}
+export interface Folder {
+    _id: string;
+    name: string;
+    description?: string;
+    public?: boolean;
+    created?: string;
+    updated?: string;
+    parentId?: string;
+    parentType?: 'collection' | 'folder';
+    [key: string]: unknown;
+}
+export interface Item {
+    _id: string;
+    name: string;
+    description?: string;
+    folderId?: string;
+    collectionId?: string;
+    public?: boolean;
+    created?: string;
+    updated?: string;
+    [key: string]: unknown;
+}
+export type Resource = (Collection | Folder | Item) & {
+    type: 'collection' | 'folder' | 'item';
+};
+export interface FolderBrowserProps {
+    /** Base URL for DSA API (e.g., http://bdsa.pathology.emory.edu:8080/api/v1) */
+    apiBaseUrl?: string;
+    /** Custom fetch function for API requests. Useful for adding authentication headers. */
+    fetchFn?: (url: string, options?: RequestInit) => Promise<Response>;
+    /** Custom headers to add to all API requests. Merged with fetchFn headers if both are provided. */
+    apiHeaders?: HeadersInit;
+    /** Callback when a resource (collection or folder) is selected */
+    onResourceSelect?: (resource: Resource) => void;
+    /** Callback when an item is selected */
+    onItemSelect?: (item: Item) => void;
+    /** Unified callback for any selection (resource or item) */
+    onSelectionChange?: (resource: Resource) => void;
+    /** Whether to show collections (default: true) */
+    showCollections?: boolean;
+    /** Root collection or folder ID to start from (if provided, only shows that resource and its children) */
+    rootId?: string;
+    /** Type of root resource (required if rootId is provided) */
+    rootType?: 'collection' | 'folder';
+    /** Collection ID to auto-expand on load */
+    startCollectionId?: string;
+    /** Folder ID to auto-expand on load */
+    startFolderId?: string;
+    /** Start at a folder's subfolder (requires parentFolderId) (deprecated: use rootId and rootType) */
+    parentFolderId?: string;
+    /** Custom render function for collections */
+    renderCollection?: (collection: Collection, isExpanded: boolean, onToggle: () => void, itemCount?: number) => React.ReactNode;
+    /** Custom render function for folders */
+    renderFolder?: (folder: Folder, depth: number, isExpanded: boolean, onToggle: () => void, itemCount?: number) => React.ReactNode;
+    /** Custom render function for items */
+    renderItem?: (item: Item, depth: number) => React.ReactNode;
+    /** Custom CSS class name */
+    className?: string;
+    /** Whether to persist expansion state to localStorage (default: false) */
+    persistExpansion?: boolean;
+    /** Key prefix for localStorage keys when persistExpansion is true (default: 'bdsa-folder-browser') */
+    persistExpansionKey?: string;
+    /** Whether to persist selection to localStorage (default: false) */
+    persistSelection?: boolean;
+    /** Key for localStorage when persistSelection is true (default: 'bdsa-folder-browser-selection') */
+    persistSelectionKey?: string;
+    /** Maximum number of folders to fetch per page (0 = fetch all, default: 0) */
+    foldersPerPage?: number;
+    /** Maximum number of items to fetch per page (0 = fetch all, default: 0) */
+    itemsPerPage?: number;
+    /** Whether to fetch and display items (default: false) */
+    showItems?: boolean;
+    /** Whether to fetch items (for counting) even if not displaying them (default: false) */
+    fetchItems?: boolean;
+    /** Filter function for items (applied after fetching) */
+    itemFilter?: (item: Item) => boolean;
+    /** Callback when items are fetched for a folder */
+    onItemsFetched?: (folderId: string, items: Item[]) => void;
+    /** Whether to show item count next to folder names (default: false) */
+    showItemCount?: boolean;
+    /** If true, enables debug logging to console. Default: false */
+    debug?: boolean;
+}
+//# sourceMappingURL=FolderBrowser.types.d.ts.map

package/dist/components/FolderBrowser/FolderBrowser.types.d.ts.map

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package/dist/components/FolderBrowser/FolderBrowser.utils.d.ts

@@ -0,0 +1,34 @@
+import { Folder } from './FolderBrowser.types';
+import { DebugLogger } from '../../utils/debugLog';
+
+/**
+ * Build fetch options with API headers
+ */
+export declare function buildFetchOptions(apiHeaders?: HeadersInit): RequestInit;
+/**
+ * Find the scrollable parent container for an element
+ */
+export declare function findScrollContainer(element: HTMLElement | null): HTMLElement | null;
+/**
+ * Preserve scroll position when expanding/collapsing tree nodes
+ * Returns a function to restore scroll position after DOM updates
+ */
+export declare function preserveScrollPosition(container: HTMLElement | null, targetElement?: HTMLElement | null): {
+    scrollContainer: HTMLElement | null;
+    scrollTop: number;
+    initialTop: number;
+    restore: () => void;
+};
+/**
+ * Parse paginated API response (handles both array and paginated object responses)
+ */
+export declare function parsePaginatedResponse<T>(data: unknown, currentOffset: number, pageSize: number): {
+    items: T[];
+    hasMore: boolean;
+    total?: number;
+};
+/**
+ * Search for a folder recursively in collections
+ */
+export declare function searchFolderInCollections(folderId: string, apiBaseUrl: string, customFetch: (url: string, options?: RequestInit) => Promise<Response>, fetchOptions: RequestInit, debugLog: DebugLogger): Promise<Folder | null>;
+//# sourceMappingURL=FolderBrowser.utils.d.ts.map

package/dist/components/FolderBrowser/FolderBrowser.utils.d.ts.map

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package/dist/components/FolderBrowser/useFolderBrowserDataFetching.d.ts

@@ -0,0 +1,58 @@
+import { Collection, Folder, Item } from './FolderBrowser.types';
+import { DebugLogger } from '../../utils/debugLog';
+
+export interface UseFolderBrowserDataFetchingParams {
+    apiBaseUrl?: string;
+    fetchFn?: (url: string, options?: RequestInit) => Promise<Response>;
+    apiHeaders?: HeadersInit;
+    foldersPerPage?: number;
+    itemsPerPage?: number;
+    shouldFetchItems: boolean;
+    itemFilter?: (item: Item) => boolean;
+    onItemsFetched?: (folderId: string, items: Item[]) => void;
+    startCollectionId?: string;
+    startFolderId?: string;
+    rootId?: string;
+    rootType?: 'collection' | 'folder';
+    setCollections: React.Dispatch<React.SetStateAction<Collection[]>>;
+    setRootCollection: React.Dispatch<React.SetStateAction<Collection | null>>;
+    setRootFolder: React.Dispatch<React.SetStateAction<Folder | null>>;
+    setFolders: React.Dispatch<React.SetStateAction<Record<string, Folder[]>>>;
+    setItems: React.Dispatch<React.SetStateAction<Record<string, Item[]>>>;
+    setPaginationState: React.Dispatch<React.SetStateAction<Record<string, {
+        offset: number;
+        hasMore: boolean;
+        loaded: boolean;
+    }>>>;
+    setItemPaginationState: React.Dispatch<React.SetStateAction<Record<string, {
+        offset: number;
+        hasMore: boolean;
+        totalCount?: number;
+    }>>>;
+    setLoading: React.Dispatch<React.SetStateAction<boolean>>;
+    setLoadingFolders: React.Dispatch<React.SetStateAction<Record<string, boolean>>>;
+    setLoadingItems: React.Dispatch<React.SetStateAction<Record<string, boolean>>>;
+    setError: React.Dispatch<React.SetStateAction<Error | null>>;
+    setExpandedCollections: React.Dispatch<React.SetStateAction<Set<string>>>;
+    setExpandedFolders: React.Dispatch<React.SetStateAction<Set<string>>>;
+    paginationState: Record<string, {
+        offset: number;
+        hasMore: boolean;
+        loaded: boolean;
+    }>;
+    itemPaginationState: Record<string, {
+        offset: number;
+        hasMore: boolean;
+        totalCount?: number;
+    }>;
+    debugLog: DebugLogger;
+}
+export interface UseFolderBrowserDataFetchingReturn {
+    loadCollections: () => Promise<void>;
+    loadFoldersForCollection: (collection: Collection, append?: boolean) => Promise<void>;
+    loadFoldersForFolder: (folder: Folder, append?: boolean) => Promise<void>;
+    loadItemsForFolder: (folderId: string, folder?: Folder, append?: boolean) => Promise<void>;
+    loadRoot: () => Promise<void>;
+}
+export declare function useFolderBrowserDataFetching(params: UseFolderBrowserDataFetchingParams): UseFolderBrowserDataFetchingReturn;
+//# sourceMappingURL=useFolderBrowserDataFetching.d.ts.map

package/dist/components/FolderBrowser/useFolderBrowserDataFetching.d.ts.map

@@ -0,0 +1 @@
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package/dist/components/FolderThumbnailBrowser/FolderThumbnailBrowser.d.ts

@@ -0,0 +1,54 @@
+import { default as React } from 'react';
+import { Item } from '../../utils/itemUtils';
+
+export interface FolderThumbnailBrowserProps {
+    /** DSA folder ID to fetch items from */
+    folderId?: string;
+    /** Array of specific image IDs to display */
+    imageIds?: string[];
+    /** Pre-loaded items array (takes precedence) */
+    items?: Item[];
+    /** DSA API base URL (e.g., "http://bdsa.pathology.emory.edu:8080/api/v1") */
+    apiBaseUrl: string;
+    /** Backend API base URL for annotation caching (optional, falls back to apiBaseUrl if not provided) */
+    backendApiBaseUrl?: string;
+    /** Headers for API requests (auth, etc.) */
+    apiHeaders?: HeadersInit;
+    /** Custom fetch function for API requests */
+    fetchFn?: (url: string, options?: RequestInit) => Promise<Response>;
+    /** Initial items per page estimate (default: 12) */
+    itemsPerPage?: number;
+    /** Thumbnail size preset (default: 'l') */
+    viewerSize?: 's' | 'm' | 'l' | 'xl';
+    /** Name of currently selected annotation to display */
+    selectedAnnotationName?: string;
+    /** Map of itemId -> annotationId */
+    annotationNameToIds?: Map<string, string> | Record<string, string>;
+    /** Opacity for annotations (0-1, default: 0.7) */
+    annotationOpacity?: number;
+    /** Callback when opacity changes */
+    onAnnotationOpacityChange?: (opacity: number) => void;
+    /** Display name for model (if viewing model training images) */
+    modelName?: string;
+    /** Dataset split information */
+    modelDatasetInfo?: {
+        train: string[];
+        val: string[];
+        test: string[];
+    };
+    /** Called when items are loaded/filtered */
+    onItemsLoaded?: (itemIds: string[]) => void;
+    /** Function to determine dataset type */
+    getDatasetType?: (itemId: string) => 'train' | 'val' | 'test' | null;
+    /** Show OpenSeadragon navigation controls (zoom, home, fullscreen) on thumbnails (default: false) */
+    showViewerControls?: boolean;
+    /** Debug mode for logging */
+    debug?: boolean;
+    /** Custom CSS class */
+    className?: string;
+}
+/**
+ * Main container component that manages pagination, filtering, and layout for thumbnail grid.
+ */
+export declare const FolderThumbnailBrowser: React.ForwardRefExoticComponent<FolderThumbnailBrowserProps & React.RefAttributes<HTMLDivElement>>;
+//# sourceMappingURL=FolderThumbnailBrowser.d.ts.map

package/dist/components/FolderThumbnailBrowser/FolderThumbnailBrowser.d.ts.map

@@ -0,0 +1 @@
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package/dist/components/SlideViewer/SlideViewer.d.ts

@@ -1,174 +1,7 @@
 import { default as React } from 'react';
-import { FeatureCollection } from 'geojson';
-import { Viewer as OpenSeadragonViewer, Options as OpenSeadragonOptions } from 'openseadragon';
+import { SlideViewerProps } from './SlideViewer.types';
 
-export interface SlideImageInfo {
-    /** Image ID from DSA (used if dziUrl is not provided) */
-    imageId?: string | number;
-    /** Image width in pixels (used if dziUrl is not provided) */
-    width?: number;
-    /** Image height in pixels (used if dziUrl is not provided) */
-    height?: number;
-    /** Tile width (used if dziUrl is not provided) */
-    tileWidth?: number;
-    /** Number of zoom levels (used if dziUrl is not provided) */
-    levels?: number;
-    /** Base URL for DSA tile server (used if dziUrl is not provided) */
-    baseUrl?: string;
-    /** DZI descriptor URL (e.g., 'http://bdsa.pathology.emory.edu:8080/api/v1/item/{itemId}/tiles/dzi.dzi')
-     *  If provided, this will be used instead of manually constructing tile URLs */
-    dziUrl?: string;
-}
-export interface AnnotationFeature {
-    /** Unique identifier for the annotation */
-    id?: string | number;
-    /** Left coordinate in pixels */
-    left: number;
-    /** Top coordinate in pixels */
-    top: number;
-    /** Width in pixels */
-    width: number;
-    /** Height in pixels */
-    height: number;
-    /** Optional color for the annotation stroke */
-    color?: string;
-    /** Optional group identifier */
-    group?: string | number;
-    /** Optional label */
-    label?: string;
-    /** Type of annotation (rectangle, polyline, etc.) */
-    annotationType?: 'rectangle' | 'polyline';
-    /** Points array for polyline annotations */
-    points?: Array<[number, number]>;
-    /** Whether polyline is closed */
-    closed?: boolean;
-    /** Fill color for polyline */
-    fillColor?: string;
-    /** Store full element for rendering */
-    element?: unknown;
-    /** Optional additional properties */
-    [key: string]: unknown;
-}
-export interface AnnotationInfoProperty {
-    /** Key to access the property value from the annotation document */
-    key: string;
-    /** Display label for this property */
-    label: string;
-    /** Optional formatter function to transform the value before display */
-    formatter?: (value: unknown, doc: {
-        id: string | number;
-        elementCount: number;
-        totalPoints: number;
-        types: string[];
-        filteredCount?: number;
-        filteredPoints?: number;
-    }) => string | React.ReactNode;
-    /** Whether to display this property (default: true) */
-    show?: boolean;
-}
-export interface AnnotationInfoConfig {
-    /** Properties to display for each fetched annotation document */
-    documentProperties?: AnnotationInfoProperty[];
-    /** Whether to show the "Fetched from DSA API" section */
-    showFetchedSection?: boolean;
-    /** Whether to show the "Provided Annotations" section */
-    showProvidedSection?: boolean;
-    /** Whether to show the "Total Rendered" section */
-    showTotalSection?: boolean;
-    /** Custom header text */
-    headerText?: string;
-}
-export interface SlideViewerProps {
-    /** Image information for the slide to display */
-    imageInfo: SlideImageInfo;
-    /** Annotations to render on the slide (array of rectangles or GeoJSON) */
-    annotations?: AnnotationFeature[] | FeatureCollection;
-    /** Annotation IDs to fetch from DSA API (baseUrl/annotation/{id}) */
-    annotationIds?: (string | number)[];
-    /** Base URL for DSA API (e.g., 'http://bdsa.pathology.emory.edu:8080/api/v1') */
-    apiBaseUrl?: string;
-    /** Callback when viewer is ready */
-    onViewerReady?: (viewer: OpenSeadragonViewer) => void;
-    /** Callback when annotation is clicked */
-    onAnnotationClick?: (annotation: AnnotationFeature) => void;
-    /** Default stroke color for annotations */
-    defaultAnnotationColor?: string;
-    /** Stroke width for annotations */
-    strokeWidth?: number;
-    /** Additional OpenSeadragon configuration options */
-    osdOptions?: OpenSeadragonOptions;
-    /** Custom CSS class name */
-    className?: string;
-    /** Height for the viewer container (e.g., '600px', '100vh', '100%').
-     *  Required: OpenSeadragon needs an explicit height to initialize properly. */
-    height?: string | number;
-    /** Width for the viewer container (defaults to '100%') */
-    width?: string | number;
-    /** Display information about loaded annotation documents */
-    showAnnotationInfo?: boolean;
-    /** Configuration for customizing the annotation info panel display */
-    annotationInfoConfig?: AnnotationInfoConfig;
-    /** Maximum number of points allowed per annotation element (default: 10000).
-     *  Annotations exceeding this limit will be skipped with a warning. */
-    maxPointsPerAnnotation?: number;
-    /** Maximum total number of points allowed across all annotations (default: 100000).
-     *  If exceeded, annotations will be filtered starting from the largest ones. */
-    maxTotalPoints?: number;
-    /** Custom fetch function for API requests. Useful for adding authentication headers.
-     *  If not provided, uses the default `fetch`. The function should match the Fetch API signature. */
-    fetchFn?: (url: string, options?: RequestInit) => Promise<Response>;
-    /** Custom headers to add to all API requests. Merged with fetchFn headers if both are provided. */
-    apiHeaders?: HeadersInit;
-    /** Authentication token to use for requests. Can be extracted from apiHeaders automatically if not provided. */
-    authToken?: string;
-    /** If true, appends the authentication token as a query parameter (?token=...) to all requests (DZI, tiles, annotations).
-     *  This is required for some DSA servers that validate tokens via query parameters instead of (or in addition to) headers.
-     *  Default: false */
-    tokenQueryParam?: boolean;
-    /** Show annotation controls panel in the sidebar (default: false) */
-    showAnnotationControls?: boolean;
-    /** Default opacity for all annotations (0-1, default: 1) */
-    defaultAnnotationOpacity?: number;
-    /** Map of annotation IDs to their individual opacity values (0-1). Overrides defaultAnnotationOpacity for specific annotations. */
-    annotationOpacities?: Map<string | number, number> | Record<string, number>;
-    /** Map of annotation IDs to their visibility state. If provided, only visible annotations will be rendered/updated. */
-    visibleAnnotations?: Map<string | number, boolean> | Record<string, boolean>;
-    /** Callback when annotation has finished loading and rendering. Called with the annotation ID. */
-    onAnnotationReady?: (annotationId: string | number) => void;
-    /** Optional pull-through cache for annotation documents. Acts as a cache-aside proxy:
-     *  1. Checks cache first on fetch requests
-     *  2. On cache miss, fetches from API and stores in cache
-     *  3. On cache hit, returns cached data immediately (no API call)
-     *  If not provided, automatically creates an IndexedDBAnnotationCache. Set to `null` to disable caching. */
-    annotationCache?: {
-        get(annotationId: string | number, versionHash?: string): Promise<unknown | null>;
-        set(annotationId: string | number, data: unknown, options?: {
-            ttl?: number;
-            versionHash?: string;
-        }): Promise<void>;
-        has(annotationId: string | number, versionHash?: string): Promise<boolean>;
-        delete(annotationId: string | number): Promise<void>;
-        clear(): Promise<void>;
-        getStats?(): Promise<{
-            size: number;
-            hits?: number;
-            misses?: number;
-            hitRate?: number;
-        }>;
-    } | null;
-    /** If true, disables caching entirely (equivalent to annotationCache={null}). Useful for debugging or forcing fresh fetches. */
-    disableCache?: boolean;
-    /** If true, disables the IntersectionObserver visibility check and initializes immediately.
-     *  Useful for cases where you want immediate initialization regardless of viewport visibility.
-     *  Default: false (visibility check enabled for better performance and error prevention) */
-    disableVisibilityCheck?: boolean;
-    /** Optional map of annotation headers (from /annotation?itemId=... endpoint) keyed by annotation ID.
-     *  If provided, used to compute version hashes for cache invalidation when annotations change on the server.
-     *  Should contain the metadata objects returned from AnnotationManager's annotation search endpoint.
-     *  Typically obtained from AnnotationManager: `annotations.map(ann => [ann._id, ann])` or similar.
-     *  If not provided, cache will work but version-based invalidation will be disabled. */
-    annotationHeaders?: Map<string | number, unknown> | Record<string, unknown>;
-}
+export type { SlideImageInfo, AnnotationFeature, AnnotationInfoProperty, AnnotationInfoConfig, SlideViewerProps } from './SlideViewer.types';
 /**
  * A slide viewer component that integrates OpenSeadragon with Paper.js annotations
  * for viewing Digital Slide Archive images with annotation overlays.

package/dist/components/SlideViewer/SlideViewer.d.ts.map

@@ -1 +1 @@
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